AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0125670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0125670 MtrunA17_Chr1g0187801 98.567 628 9 0 1 628 1 628 0.0 1285
Msa0125670 MtrunA17_Chr1g0167721 76.744 602 133 6 4 601 2 600 0.0 936
Msa0125670 MtrunA17_Chr5g0426121 55.882 612 243 7 2 596 5 606 0.0 698
Msa0125670 MtrunA17_Chr4g0003821 28.731 536 334 19 1 510 11 524 1.95e-51 186
Msa0125670 MtrunA17_Chr3g0138841 28.163 490 278 18 2 446 94 554 2.86e-28 120
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0125670 AT1G04400.1 69.340 561 159 4 5 562 6 556 0.0 808
Msa0125670 AT1G04400.2 69.340 561 159 4 5 562 6 556 0.0 808
Msa0125670 AT4G08920.1 59.815 540 204 6 7 536 15 551 0.0 669
Msa0125670 AT3G15620.1 29.735 528 315 17 6 501 26 529 3.50e-53 191
Msa0125670 AT5G24850.1 29.598 473 275 19 2 444 82 526 7.87e-34 137
Msa0125670 AT3G15620.2 29.009 424 249 15 6 397 26 429 6.99e-32 129

Find 200 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTAATTATGTTTCTAAATT+AGG 0.046710 1_3:+54240747 Msa0125670:five_prime_UTR
CAAGGCTTTAACAGAATTTA+TGG 0.120110 1_3:+54242446 Msa0125670:CDS
CACAGAAAACAGTTCATTTA+TGG 0.162448 1_3:-54245004 None:intergenic
TAAAATTGTCCTTCCTCTTT+AGG 0.172518 1_3:-54241249 None:intergenic
CAAGACTATCAAAATATTTA+AGG 0.174603 1_3:-54245110 None:intergenic
TCAGAAAGTGCCGGCATTTC+AGG 0.176635 1_3:+54244322 Msa0125670:CDS
TCGTCTACTAGATTAGTTTA+TGG 0.184761 1_3:-54245143 None:intergenic
GCCATATCTATATCAATTAT+TGG 0.201692 1_3:-54244128 None:intergenic
TGCCTTACATATTCTCCTTC+TGG 0.214099 1_3:-54243993 None:intergenic
AATGGGGAATGAAGTATTTC+TGG 0.219485 1_3:+54242916 Msa0125670:CDS
TGGCTATATTCTCAATAAAA+TGG 0.230875 1_3:+54245025 Msa0125670:three_prime_UTR
TCTTATCTAAGTTGAAAATA+AGG 0.233821 1_3:-54239997 None:intergenic
AATTTCCCACATCTTGAATA+TGG 0.234109 1_3:-54244171 None:intergenic
TTTGAAGCCTAGATATAATA+TGG 0.235090 1_3:+54241116 Msa0125670:exon
CTGTATTCCCTGTGTTTATA+TGG 0.246769 1_3:+54241223 Msa0125670:CDS
CTAATAGGTAGTTCATTCTT+AGG 0.252046 1_3:-54244347 None:intergenic
TTAATTATGTTTCTAAATTA+GGG 0.252907 1_3:+54240748 Msa0125670:five_prime_UTR
CCTCATCTTCAAATCTAAAA+TGG 0.261221 1_3:+54244546 Msa0125670:CDS
GTATTTCTGGGACACGCTTT+TGG 0.272715 1_3:+54242929 Msa0125670:CDS
GAACCATTGTTTGGTTTAGA+AGG 0.277961 1_3:+54241148 Msa0125670:CDS
TAATATATCTTCCTTATCTT+AGG 0.278148 1_3:+54240050 Msa0125670:five_prime_UTR
ACTCATGAGAGAGCACTTCT+TGG 0.306648 1_3:+54242711 Msa0125670:CDS
CATGTGGGCTGAGTTGGTTT+TGG 0.306649 1_3:+54240828 Msa0125670:five_prime_UTR
TCCTTAAGGAGGACAACTTT+TGG 0.310889 1_3:-54244266 None:intergenic
CTAAGAATGAACTACCTATT+AGG 0.318143 1_3:+54244348 Msa0125670:CDS
TTGCATACTACTTTGCTATC+TGG 0.318194 1_3:-54240863 None:intergenic
AAATGTTCAATAGAGGATTT+AGG 0.326416 1_3:+54242348 Msa0125670:CDS
CAAGCAGCATCAAAAGCTTC+TGG 0.339324 1_3:+54244194 Msa0125670:CDS
CTCCAAGTCTTGAAGTTTGA+CGG 0.343433 1_3:-54242765 None:intergenic
TTATCAGTGAAAAGCTATAA+TGG 0.349616 1_3:+54241925 Msa0125670:CDS
TGTTGCTTCTACCTTGGAAA+TGG 0.350799 1_3:+54242898 Msa0125670:CDS
TGCAAGCATCTCTGCCAAAA+AGG 0.354280 1_3:-54242012 None:intergenic
TTGCTACCCATATTATATCT+AGG 0.355825 1_3:-54241123 None:intergenic
TATCAGTGAAAAGCTATAAT+GGG 0.356330 1_3:+54241926 Msa0125670:CDS
CTGTAGAGCAAGTGTCTTCA+TGG 0.357346 1_3:-54244457 None:intergenic
CTGGATTGTCCTCAATTCTA+AGG 0.360401 1_3:-54241173 None:intergenic
TCCAAAAGTTGTCCTCCTTA+AGG 0.363395 1_3:+54244265 Msa0125670:CDS
CTCTTAGTCCAATTGCTCTA+AGG 0.366113 1_3:-54242653 None:intergenic
ATAAGCTATAAGTACTTGTT+AGG 0.370776 1_3:+54240899 Msa0125670:five_prime_UTR
GTTGCTTCTACCTTGGAAAT+GGG 0.372170 1_3:+54242899 Msa0125670:CDS
ATGAGCACTGCAGCTGCTAC+TGG 0.373841 1_3:-54244966 None:intergenic
CACCACCTTGAAACTCTTCC+TGG 0.373919 1_3:-54241273 None:intergenic
TCCAATAATTGATATAGATA+TGG 0.381151 1_3:+54244127 Msa0125670:CDS
AAACCAAGCAACGCGTTACT+AGG 0.385656 1_3:+54242390 Msa0125670:CDS
CAGTGCTCATGGAAAGAAAA+TGG 0.390156 1_3:+54244979 Msa0125670:three_prime_UTR
TGTATGTAGGAATGGAAGAT+AGG 0.391374 1_3:-54239923 None:intergenic
TGCAGGAATGAGAGAACTTT+GGG 0.399544 1_3:+54242818 Msa0125670:CDS
TCTTCACTCTTTACCATCAT+AGG 0.400035 1_3:+54244799 Msa0125670:three_prime_UTR
TCTATATCAATTATTGGATT+CGG 0.400812 1_3:-54244122 None:intergenic
GTTGTGTTTAACCATCTCTA+TGG 0.405567 1_3:+54241423 Msa0125670:CDS
ATATGCATCAAGTTCCAAAA+AGG 0.405729 1_3:-54245204 None:intergenic
TTATCCCCGTATCTCCATTT+CGG 0.407052 1_3:+54242531 Msa0125670:CDS
TGGTCTCGAACCAGTGAAAC+AGG 0.407880 1_3:-54241871 None:intergenic
CTCATTCCTGCATCAACTAA+AGG 0.411661 1_3:-54242807 None:intergenic
CGTCCTAGTAACGCGTTGCT+TGG 0.415085 1_3:-54242393 None:intergenic
CGCTCAAGCTCGTGACCGTC+TGG 0.421155 1_3:-54243005 None:intergenic
ATGAGAGAACTTTGGGCTAC+AGG 0.422513 1_3:+54242825 Msa0125670:CDS
ATATTTAAGGACTTCTCATT+CGG 0.428113 1_3:-54245097 None:intergenic
CTTAGTGTGCTTAGAGCATC+AGG 0.428735 1_3:+54244077 Msa0125670:CDS
ACAGACATGGAGCAAAGCTC+AGG 0.431235 1_3:+54244584 Msa0125670:CDS
CAAGGTGGAATAAGCGAAAC+AGG 0.434780 1_3:-54242048 None:intergenic
TTTATCAGATCCTGTTTCAC+TGG 0.435781 1_3:+54241861 Msa0125670:intron
CTTATCTAAGTTGAAAATAA+GGG 0.436200 1_3:-54239996 None:intergenic
GTAGCAATAGAACCATTGTT+TGG 0.440981 1_3:+54241139 Msa0125670:CDS
CAGCACTAGCTGCTGCTGCT+AGG 0.442114 1_3:+54241193 Msa0125670:CDS
ACCGAGACAATTTAATCCTT+AGG 0.444137 1_3:+54244722 Msa0125670:three_prime_UTR
ATGCAGGAATGAGAGAACTT+TGG 0.446720 1_3:+54242817 Msa0125670:CDS
TCTTGAATATGGCTTGAGTC+AGG 0.448589 1_3:-54244160 None:intergenic
CTAGCAGCAGCAGCTAGTGC+TGG 0.448793 1_3:-54241192 None:intergenic
TGAAAATGTTGCTTCTACCT+TGG 0.450718 1_3:+54242892 Msa0125670:CDS
CATCACTGTGTTTCATAATG+AGG 0.450976 1_3:+54244830 Msa0125670:three_prime_UTR
TCTCGAACCAAGTGATTTCA+AGG 0.453164 1_3:-54241328 None:intergenic
TCACACTCAACTCTCCGAAA+TGG 0.453446 1_3:-54242545 None:intergenic
ACTATCTTTCACATGATTCA+CGG 0.453888 1_3:-54244417 None:intergenic
TTGAAACTATAACTCTGATT+CGG 0.455014 1_3:-54242860 None:intergenic
TTGGAACTTGATGCATATGA+AGG 0.457765 1_3:+54245209 Msa0125670:three_prime_UTR
ACCTAAGGATTAAATTGTCT+CGG 0.458835 1_3:-54244723 None:intergenic
GACATGTATACATGCTAGTA+AGG 0.463142 1_3:+54245252 Msa0125670:three_prime_UTR
GGCTACCCTTTAGTTGATGC+AGG 0.466577 1_3:+54242801 Msa0125670:CDS
TCATTCCTGCATCAACTAAA+GGG 0.470820 1_3:-54242806 None:intergenic
CTGAGTGGATCCATCATCCT+TGG 0.471071 1_3:+54244045 Msa0125670:CDS
CCAAAATCTTATCAAAGAAA+AGG 0.471643 1_3:-54239962 None:intergenic
AGCACTAGCTGCTGCTGCTA+GGG 0.473785 1_3:+54241194 Msa0125670:CDS
GAGATGCTTGCACAAGCAAA+TGG 0.474718 1_3:+54242023 Msa0125670:CDS
CGGTCACGAGCTTGAGCGCT+TGG 0.474915 1_3:+54243010 Msa0125670:CDS
TAGAAGGGACCTTAGAATTG+AGG 0.477865 1_3:+54241164 Msa0125670:CDS
AACTCTCCGAAATGGAGATA+CGG 0.477912 1_3:-54242537 None:intergenic
CTCGGCTGGCAGTATATCTC+AGG 0.480304 1_3:+54242975 Msa0125670:CDS
CTAGCTGCTGCTGCTAGGGA+TGG 0.482748 1_3:+54241198 Msa0125670:CDS
AAAGAAAAGCTAGTGGAACT+TGG 0.484127 1_3:+54241901 Msa0125670:CDS
ATCCGTCAAACTTCAAGACT+TGG 0.488443 1_3:+54242763 Msa0125670:CDS
ATGCCTTAAAACTTGTGAAA+GGG 0.489095 1_3:+54240804 Msa0125670:five_prime_UTR
AGTCAAGAAATGTTCAATAG+AGG 0.489309 1_3:+54242341 Msa0125670:CDS
CTAGGACGAGCATGGTCTCC+AGG 0.489522 1_3:+54242408 Msa0125670:CDS
ACTCTCCGAAATGGAGATAC+GGG 0.489556 1_3:-54242536 None:intergenic
TTCTTAGGATCCTGAAATGC+CGG 0.490558 1_3:-54244332 None:intergenic
ATCCAGAAGGAGAATATGTA+AGG 0.496224 1_3:+54243991 Msa0125670:CDS
GATCAGTCCTTGAAATCACT+TGG 0.496518 1_3:+54241321 Msa0125670:CDS
ATGTCTGTCTGTTCTTGCCA+TGG 0.496950 1_3:-54244569 None:intergenic
TACTTCACTACTCCAAGAAT+AGG 0.498999 1_3:+54242478 Msa0125670:CDS
GAGTACTCTCAATGCTCTCT+TGG 0.499541 1_3:+54241371 Msa0125670:CDS
AGTAGCAGCTGCAGTGCTCA+TGG 0.499803 1_3:+54244968 Msa0125670:three_prime_UTR
GGATCTGTTGTATGAGCCTT+GGG 0.500509 1_3:+54241948 Msa0125670:CDS
ATCACTGTGTTTCATAATGA+GGG 0.503371 1_3:+54244831 Msa0125670:three_prime_UTR
GATGCCTTAAAACTTGTGAA+AGG 0.503573 1_3:+54240803 Msa0125670:five_prime_UTR
TTTATCCAGGAAGAGTTTCA+AGG 0.505143 1_3:+54241268 Msa0125670:CDS
TTGTCAGCATTGCTCCAACC+TGG 0.505947 1_3:-54242426 None:intergenic
AACCATTGTTTGGTTTAGAA+GGG 0.509245 1_3:+54241149 Msa0125670:CDS
TGAAGAGAAGAGAAAGAACA+AGG 0.511587 1_3:+54244388 Msa0125670:CDS
CTACTCCAAGAATAGGCAAA+AGG 0.511893 1_3:+54242485 Msa0125670:CDS
AAGGGACATGTGGGCTGAGT+TGG 0.512399 1_3:+54240822 Msa0125670:five_prime_UTR
AGCCGAGGATATCACATTCA+AGG 0.517876 1_3:-54242959 None:intergenic
AGCTTCTGGCTCTGAAGCAA+GGG 0.519234 1_3:+54244208 Msa0125670:CDS
ATGGGGAATGAAGTATTTCT+GGG 0.522424 1_3:+54242917 Msa0125670:CDS
GAAGCAGTCTTTAGTTCACT+TGG 0.523042 1_3:+54241299 Msa0125670:CDS
AAGCTTCTGGCTCTGAAGCA+AGG 0.524562 1_3:+54244207 Msa0125670:CDS
CAGGAAGAGTTTCAAGGTGG+TGG 0.530377 1_3:+54241274 Msa0125670:CDS
GAGCAAAGCTCAGGGAAAGA+TGG 0.532049 1_3:+54244593 Msa0125670:CDS
ACATGCAGTGTATGTAGGAA+TGG 0.537066 1_3:-54239931 None:intergenic
TTGTGGAACAGAAAATGAAT+AGG 0.538477 1_3:-54244516 None:intergenic
TCCAAACAAAGCCTAAGATA+AGG 0.538928 1_3:-54240061 None:intergenic
TCGCATAAAGCAGATATTGT+GGG 0.539284 1_3:+54242587 Msa0125670:CDS
GGGATCTGTTGTATGAGCCT+TGG 0.542320 1_3:+54241947 Msa0125670:CDS
CTCAAGCCATATTCAAGATG+TGG 0.544153 1_3:+54244165 Msa0125670:CDS
AAGAATAGGCAAAAGGTTGG+TGG 0.546393 1_3:+54242492 Msa0125670:CDS
GACGAGCATGGTCTCCAGGT+TGG 0.548035 1_3:+54242412 Msa0125670:CDS
GTTGGCATTCTCGCCAACTC+AGG 0.548803 1_3:-54244023 None:intergenic
TTGAAGCCTAGATATAATAT+GGG 0.550311 1_3:+54241117 Msa0125670:exon
GTGGTGCATTCCAAGGATGA+TGG 0.551180 1_3:-54244055 None:intergenic
AAGGCAATGGCTACCTGAGT+TGG 0.551193 1_3:+54244010 Msa0125670:CDS
CAATAACATGCAGTGTATGT+AGG 0.551922 1_3:-54239936 None:intergenic
TTGAATGTGATATCCTCGGC+TGG 0.555532 1_3:+54242961 Msa0125670:CDS
AGGTTGGAGCAATGCTGACA+AGG 0.556873 1_3:+54242428 Msa0125670:CDS
TGATGTAGAAAGTCCTATGA+TGG 0.557449 1_3:-54244812 None:intergenic
TGCTACTGGATTTATAGATA+AGG 0.557884 1_3:-54244952 None:intergenic
CTTCAAATCTAAAATGGCCA+TGG 0.558284 1_3:+54244552 Msa0125670:CDS
TTGGGAAGTATATGATGAGA+AGG 0.559387 1_3:+54241966 Msa0125670:CDS
ACTTGGAGACAAGGTAGGAC+TGG 0.559715 1_3:+54242780 Msa0125670:CDS
TACTTCATTCCCCATTTCCA+AGG 0.559892 1_3:-54242909 None:intergenic
AGAGCATCAGGAGTCGAGCT+AGG 0.561014 1_3:+54244089 Msa0125670:CDS
TTCTCATCATATACTTCCCA+AGG 0.561654 1_3:-54241964 None:intergenic
TGAGCGCTTGGATGATCCTG+AGG 0.562126 1_3:+54243022 Msa0125670:CDS
TTAATGTGCATACCTTCAGC+AGG 0.564087 1_3:-54242081 None:intergenic
GGATCTAGGTTTGATCCAGA+AGG 0.564228 1_3:+54243978 Msa0125670:CDS
CTGTTTCGCTTATTCCACCT+TGG 0.564355 1_3:+54242049 Msa0125670:CDS
GTTTATATGGTGTCCTAAAG+AGG 0.569764 1_3:+54241236 Msa0125670:CDS
ACACTAAGTGGTGCATTCCA+AGG 0.571610 1_3:-54244062 None:intergenic
TGGCAATTAATTCCTGCTGA+AGG 0.571990 1_3:+54242069 Msa0125670:CDS
TTGCTTCTACCTTGGAAATG+GGG 0.574156 1_3:+54242900 Msa0125670:CDS
GACCTTGAATGTGATATCCT+CGG 0.577392 1_3:+54242957 Msa0125670:CDS
AGCTAATGATCAGAAAGTGC+CGG 0.577971 1_3:+54244313 Msa0125670:CDS
CTCGCATAAAGCAGATATTG+TGG 0.579056 1_3:+54242586 Msa0125670:CDS
TCAAGCCATATTCAAGATGT+GGG 0.581508 1_3:+54244166 Msa0125670:CDS
TAGCAAAGTAGTATGCAAGT+TGG 0.582266 1_3:+54240868 Msa0125670:five_prime_UTR
GAAGATGAGGAACATTGTTG+TGG 0.582759 1_3:-54244533 None:intergenic
AAGGAGAATATGTAAGGCAA+TGG 0.584996 1_3:+54243997 Msa0125670:CDS
CAGATATTGTGGGGAAACGA+AGG 0.585311 1_3:+54242597 Msa0125670:CDS
GAGAACTTTGGGCTACAGGA+TGG 0.589010 1_3:+54242829 Msa0125670:CDS
GGATGATGGATCCACTCAGT+TGG 0.589489 1_3:-54244041 None:intergenic
TCCAAGAATAGGCAAAAGGT+TGG 0.591255 1_3:+54242489 Msa0125670:CDS
AGTGCTCTCTCATGAGTGAA+CGG 0.592898 1_3:-54242705 None:intergenic
AAACTTGTGAAAGGGACATG+TGG 0.597412 1_3:+54240812 Msa0125670:five_prime_UTR
AAGTAAATAATATACAATGT+TGG 0.599908 1_3:-54245072 None:intergenic
GATGCTCTAAGCACACTAAG+TGG 0.600085 1_3:-54244074 None:intergenic
GGAAACGAAGGCAACAGTGT+TGG 0.600244 1_3:+54242609 Msa0125670:CDS
ATACTACTTTGCTATCTGGA+AGG 0.601501 1_3:-54240859 None:intergenic
CTGAGATATACTGCCAGCCG+AGG 0.601742 1_3:-54242974 None:intergenic
TTTGACGGATCAGCATTCCA+AGG 0.608296 1_3:-54242750 None:intergenic
TCAAGACTTGGAGACAAGGT+AGG 0.609400 1_3:+54242775 Msa0125670:CDS
TCAGCAGGAATTAATTGCCA+AGG 0.610860 1_3:-54242066 None:intergenic
TTTCATGCAGGGGCGACAGG+AGG 0.611889 1_3:+54244919 Msa0125670:three_prime_UTR
ATATGGTGTCCTAAAGAGGA+AGG 0.616143 1_3:+54241240 Msa0125670:CDS
TTAGGACACCATATAAACAC+AGG 0.616586 1_3:-54241231 None:intergenic
CAGACATGGAGCAAAGCTCA+GGG 0.619340 1_3:+54244585 Msa0125670:CDS
TTGACGGATCAGCATTCCAA+GGG 0.619378 1_3:-54242749 None:intergenic
AACTTCAAGACTTGGAGACA+AGG 0.622090 1_3:+54242771 Msa0125670:CDS
CGCATAAAGCAGATATTGTG+GGG 0.626353 1_3:+54242588 Msa0125670:CDS
AGCACTACTTACCATAGAGA+TGG 0.626546 1_3:-54241434 None:intergenic
CAACATCAAAGAAAAGCTAG+TGG 0.627181 1_3:+54241894 Msa0125670:CDS
ATCTCAGGATGCTTACCAGA+CGG 0.628095 1_3:+54242990 Msa0125670:CDS
TTCTCACTAGGCATAAGTCA+TGG 0.633959 1_3:+54245173 Msa0125670:three_prime_UTR
AACTTGTGAAAGGGACATGT+GGG 0.634802 1_3:+54240813 Msa0125670:five_prime_UTR
ATCAGTGAAAAGCTATAATG+GGG 0.635939 1_3:+54241927 Msa0125670:CDS
GTCCCTTCTAAACCAAACAA+TGG 0.637331 1_3:-54241151 None:intergenic
TTAAATGTAATCATATATGT+CGG 0.641334 1_3:+54245285 Msa0125670:three_prime_UTR
ACGCGTTACTAGGACGAGCA+TGG 0.642349 1_3:+54242400 Msa0125670:CDS
GCAGGAATTAATTGCCAAGG+TGG 0.644364 1_3:-54242063 None:intergenic
AATGTAATCATATATGTCGG+TGG 0.647016 1_3:+54245288 Msa0125670:three_prime_UTR
TTAGCTGAAATAGTAGCAGA+CGG 0.651586 1_3:-54244296 None:intergenic
TGGGAAGTATATGATGAGAA+GGG 0.652926 1_3:+54241967 Msa0125670:CDS
TGGCGAGAATGCCAACTGAG+TGG 0.660213 1_3:+54244030 Msa0125670:CDS
ATTTCGGAGAGTTGAGTGTG+AGG 0.666895 1_3:+54242547 Msa0125670:CDS
ATGGCAAGAACAGACAGACA+TGG 0.671080 1_3:+54244571 Msa0125670:CDS
CTCTCCGAAATGGAGATACG+GGG 0.691586 1_3:-54242535 None:intergenic
ATCCAGGAAGAGTTTCAAGG+TGG 0.698355 1_3:+54241271 Msa0125670:CDS
ATATGATTGAGTGTGTGTGA+AGG 0.699895 1_3:-54239894 None:intergenic
ATACGGGGATAACAGCGAGG+TGG 0.704873 1_3:-54242520 None:intergenic
GACGATAAATTATTCTCACT+AGG 0.709024 1_3:+54245161 Msa0125670:three_prime_UTR
TAGGACACCATATAAACACA+GGG 0.720737 1_3:-54241230 None:intergenic
GAGATACGGGGATAACAGCG+AGG 0.744456 1_3:-54242523 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTCATATAATTATATATA+AGG - chr1_3:54240248-54240267 None:intergenic 10.0%
!! TTCCTATATATTATATATAA+GGG - chr1_3:54240322-54240341 None:intergenic 10.0%
!! TTTCCTATATATTATATATA+AGG - chr1_3:54240323-54240342 None:intergenic 10.0%
!!! TTTATTTTTCTACTTTTTTT+TGG - chr1_3:54240379-54240398 None:intergenic 10.0%
!!! TATTTTATTCATTTTAGATT+TGG + chr1_3:54240401-54240420 Msa0125670:intron 10.0%
!!! TTAATTATGTTTCTAAATTA+GGG + chr1_3:54240748-54240767 Msa0125670:five_prime_UTR 10.0%
!! AAAAATACACAAAAAAAATA+TGG - chr1_3:54240778-54240797 None:intergenic 10.0%
!! TCCTATATATTATATATAAG+GGG - chr1_3:54240321-54240340 None:intergenic 15.0%
!!! GTTAATTATGTTTCTAAATT+AGG + chr1_3:54240747-54240766 Msa0125670:five_prime_UTR 15.0%
!!! TTCATTTATAGTATAGTTTT+TGG + chr1_3:54242120-54242139 Msa0125670:intron 15.0%
!! TGAATAAATTATTGAATACA+GGG - chr1_3:54243100-54243119 None:intergenic 15.0%
!! TTGAATAAATTATTGAATAC+AGG - chr1_3:54243101-54243120 None:intergenic 15.0%
!! GCTTATAACATATATTAAAA+TGG - chr1_3:54243660-54243679 None:intergenic 15.0%
!! AAGTAAATAATATACAATGT+TGG - chr1_3:54245075-54245094 None:intergenic 15.0%
!! TTAAATGTAATCATATATGT+CGG + chr1_3:54245285-54245304 Msa0125670:three_prime_UTR 15.0%
!!! CTTATCTAAGTTGAAAATAA+GGG - chr1_3:54239999-54240018 None:intergenic 20.0%
!!! TCTTATCTAAGTTGAAAATA+AGG - chr1_3:54240000-54240019 None:intergenic 20.0%
!! TAATATATCTTCCTTATCTT+AGG + chr1_3:54240050-54240069 Msa0125670:five_prime_UTR 20.0%
!! CCTATATATTATATATAAGG+GGG - chr1_3:54240320-54240339 None:intergenic 20.0%
!! AAAATTGATACACTAAAAAC+TGG - chr1_3:54241018-54241037 None:intergenic 20.0%
!!! AAACCATTTTTAAACTTTTG+AGG + chr1_3:54241066-54241085 Msa0125670:five_prime_UTR 20.0%
!!! TTTGGTTACACTTAATATTT+TGG + chr1_3:54241533-54241552 Msa0125670:intron 20.0%
!!! TTTTTCTATTAGTAACATAG+AGG + chr1_3:54241585-54241604 Msa0125670:intron 20.0%
!!! AAAAGATGATATTTTCGTTT+TGG - chr1_3:54242247-54242266 None:intergenic 20.0%
!!! TAGATAATAGCTTTTATATC+TGG + chr1_3:54243276-54243295 Msa0125670:intron 20.0%
!! TAAAATTTCAAAGTACAAAC+TGG - chr1_3:54243382-54243401 None:intergenic 20.0%
!!! TATAGGAAACAAGTTTTATT+AGG + chr1_3:54243858-54243877 Msa0125670:intron 20.0%
!! TCTATATCAATTATTGGATT+CGG - chr1_3:54244125-54244144 None:intergenic 20.0%
!! TCCAATAATTGATATAGATA+TGG + chr1_3:54244127-54244146 Msa0125670:CDS 20.0%
!!! ATCCTTAGGTTTATTTTTTT+AGG + chr1_3:54244736-54244755 Msa0125670:three_prime_UTR 20.0%
!!! TCCTTAGGTTTATTTTTTTA+GGG + chr1_3:54244737-54244756 Msa0125670:three_prime_UTR 20.0%
!! CAAGACTATCAAAATATTTA+AGG - chr1_3:54245113-54245132 None:intergenic 20.0%
! CCAAAATCTTATCAAAGAAA+AGG - chr1_3:54239965-54239984 None:intergenic 25.0%
!! CCTTTTCTTTGATAAGATTT+TGG + chr1_3:54239962-54239981 Msa0125670:five_prime_UTR 25.0%
! CAAAAAGGAAAGAAAGTAAA+AGG + chr1_3:54240086-54240105 Msa0125670:intron 25.0%
! GTAAAAGGAAAGAATGTTTA+AGG + chr1_3:54240101-54240120 Msa0125670:intron 25.0%
!!! AGGAAAGTAAGATGATTTTT+TGG + chr1_3:54240147-54240166 Msa0125670:intron 25.0%
!!! AAGATGATTTTTTGGTTGTT+TGG + chr1_3:54240155-54240174 Msa0125670:intron 25.0%
!!! GACGACAAATTCAATTTTTT+TGG - chr1_3:54240298-54240317 None:intergenic 25.0%
! CCCCCTTATATATAATATAT+AGG + chr1_3:54240317-54240336 Msa0125670:intron 25.0%
!! TATTGTCATTTCATGGAATT+TGG + chr1_3:54240461-54240480 Msa0125670:intron 25.0%
!! ATATTCTGTTTTCCATTGTT+TGG - chr1_3:54240583-54240602 None:intergenic 25.0%
! ATAAGCTATAAGTACTTGTT+AGG + chr1_3:54240899-54240918 Msa0125670:five_prime_UTR 25.0%
! TCACCTCAAAAGTTTAAAAA+TGG - chr1_3:54241072-54241091 None:intergenic 25.0%
!! TTTGAAGCCTAGATATAATA+TGG + chr1_3:54241116-54241135 Msa0125670:exon 25.0%
! TTGAAGCCTAGATATAATAT+GGG + chr1_3:54241117-54241136 Msa0125670:exon 25.0%
!!! GATTTGATTTGATTCATGTT+TGG + chr1_3:54241515-54241534 Msa0125670:intron 25.0%
! ATGTTACTAATAGAAAAAGC+CGG - chr1_3:54241583-54241602 None:intergenic 25.0%
! TTATCAGTGAAAAGCTATAA+TGG + chr1_3:54241925-54241944 Msa0125670:CDS 25.0%
! TATCAGTGAAAAGCTATAAT+GGG + chr1_3:54241926-54241945 Msa0125670:CDS 25.0%
!!! TATAGTTTTTGGTTCTACAT+TGG + chr1_3:54242131-54242150 Msa0125670:intron 25.0%
!!! ATGATATTTTCGTTTTGGAT+AGG - chr1_3:54242242-54242261 None:intergenic 25.0%
! TTGCTGTATCATAATAACTA+TGG - chr1_3:54242284-54242303 None:intergenic 25.0%
! AAATGTTCAATAGAGGATTT+AGG + chr1_3:54242348-54242367 Msa0125670:CDS 25.0%
! TTGAAACTATAACTCTGATT+CGG - chr1_3:54242863-54242882 None:intergenic 25.0%
! ATAAATTATTGAATACAGGG+TGG - chr1_3:54243097-54243116 None:intergenic 25.0%
! CAAATTAGATATTTAACGAG+CGG - chr1_3:54243331-54243350 None:intergenic 25.0%
! TAAGTTCGTTTATTCAAACA+GGG - chr1_3:54243552-54243571 None:intergenic 25.0%
!!! GGTATTACTTTTTCGTATAT+AGG + chr1_3:54243841-54243860 Msa0125670:intron 25.0%
! GCCATATCTATATCAATTAT+TGG - chr1_3:54244131-54244150 None:intergenic 25.0%
! TCCCTAAAAAAATAAACCTA+AGG - chr1_3:54244741-54244760 None:intergenic 25.0%
!! AAGAATTTTCATTTTCATGC+AGG + chr1_3:54244907-54244926 Msa0125670:three_prime_UTR 25.0%
!! AGAATTTTCATTTTCATGCA+GGG + chr1_3:54244908-54244927 Msa0125670:three_prime_UTR 25.0%
! TGGCTATATTCTCAATAAAA+TGG + chr1_3:54245025-54245044 Msa0125670:three_prime_UTR 25.0%
! ATATTTAAGGACTTCTCATT+CGG - chr1_3:54245100-54245119 None:intergenic 25.0%
!! CATTTTCGTATATGAAGTAT+CGG + chr1_3:54245344-54245363 Msa0125670:three_prime_UTR 25.0%
GATTGTGAAAAGAAAGTGAA+AGG + chr1_3:54240185-54240204 Msa0125670:intron 30.0%
GATGTAAGCAAGAACAAATT+AGG + chr1_3:54240267-54240286 Msa0125670:intron 30.0%
!! AGGAAAGAAAGTTTTATGCT+GGG - chr1_3:54240542-54240561 None:intergenic 30.0%
!! AAGGAAAGAAAGTTTTATGC+TGG - chr1_3:54240543-54240562 None:intergenic 30.0%
GAAACTATAAGGAAAGAAAG+TGG - chr1_3:54240626-54240645 None:intergenic 30.0%
TTGGTTTCAGAGAAACTATA+AGG - chr1_3:54240637-54240656 None:intergenic 30.0%
ATGCCTTAAAACTTGTGAAA+GGG + chr1_3:54240804-54240823 Msa0125670:five_prime_UTR 30.0%
TTGCTACCCATATTATATCT+AGG - chr1_3:54241126-54241145 None:intergenic 30.0%
! AACCATTGTTTGGTTTAGAA+GGG + chr1_3:54241149-54241168 Msa0125670:CDS 30.0%
TAAAATTGTCCTTCCTCTTT+AGG - chr1_3:54241252-54241271 None:intergenic 30.0%
GTAAAATGCTGGATTCTTAT+TGG + chr1_3:54241678-54241697 Msa0125670:intron 30.0%
ACAATCATGGTACAAAATGT+TGG - chr1_3:54241841-54241860 None:intergenic 30.0%
AGGATCTGATAAAACAATCA+TGG - chr1_3:54241854-54241873 None:intergenic 30.0%
ATCAGTGAAAAGCTATAATG+GGG + chr1_3:54241927-54241946 Msa0125670:CDS 30.0%
AGTAAGTTAGTAGTTGTGTT+GGG - chr1_3:54242211-54242230 None:intergenic 30.0%
TAGTAAGTTAGTAGTTGTGT+TGG - chr1_3:54242212-54242231 None:intergenic 30.0%
AGTCAAGAAATGTTCAATAG+AGG + chr1_3:54242341-54242360 Msa0125670:CDS 30.0%
! CAAGGCTTTAACAGAATTTA+TGG + chr1_3:54242446-54242465 Msa0125670:CDS 30.0%
!! TGTGAGGAAAGTTTTTCAAA+TGG + chr1_3:54242563-54242582 Msa0125670:CDS 30.0%
TCCAATCAACTGCATAAATT+TGG + chr1_3:54243238-54243257 Msa0125670:intron 30.0%
ACCAAATTTATGCAGTTGAT+TGG - chr1_3:54243242-54243261 None:intergenic 30.0%
CAACTATTATAGTCATGCTA+AGG - chr1_3:54243492-54243511 None:intergenic 30.0%
GTAAGTTCGTTTATTCAAAC+AGG - chr1_3:54243553-54243572 None:intergenic 30.0%
!! GCTATTTTCGTAAACTATCT+TGG + chr1_3:54243678-54243697 Msa0125670:intron 30.0%
AAACTATCTTGGAGATCTTA+TGG + chr1_3:54243689-54243708 Msa0125670:intron 30.0%
! AATGAACAGATAACAGCTTT+TGG + chr1_3:54243713-54243732 Msa0125670:intron 30.0%
AGTAATACCAATCTCACTTA+GGG - chr1_3:54243830-54243849 None:intergenic 30.0%
AAGTAATACCAATCTCACTT+AGG - chr1_3:54243831-54243850 None:intergenic 30.0%
!! GTTTTATTAGGTTTGTTCGT+TGG + chr1_3:54243870-54243889 Msa0125670:intron 30.0%
! TAGCGTGATTTCTCTAATTT+TGG + chr1_3:54243932-54243951 Msa0125670:intron 30.0%
! TCATTGTTTGTCCAGATTTT+AGG + chr1_3:54243957-54243976 Msa0125670:intron 30.0%
AATTTCCCACATCTTGAATA+TGG - chr1_3:54244174-54244193 None:intergenic 30.0%
CTAATAGGTAGTTCATTCTT+AGG - chr1_3:54244350-54244369 None:intergenic 30.0%
CTAAGAATGAACTACCTATT+AGG + chr1_3:54244348-54244367 Msa0125670:CDS 30.0%
! CATTTTGTTCTCTTCCTAAT+AGG - chr1_3:54244365-54244384 None:intergenic 30.0%
ACTATCTTTCACATGATTCA+CGG - chr1_3:54244420-54244439 None:intergenic 30.0%
TTGTGGAACAGAAAATGAAT+AGG - chr1_3:54244519-54244538 None:intergenic 30.0%
! CCATTTTAGATTTGAAGATG+AGG - chr1_3:54244549-54244568 None:intergenic 30.0%
CCTCATCTTCAAATCTAAAA+TGG + chr1_3:54244546-54244565 Msa0125670:CDS 30.0%
!! AGTTACTTCTATTTTTCTCG+TGG - chr1_3:54244681-54244700 None:intergenic 30.0%
ACCTAAGGATTAAATTGTCT+CGG - chr1_3:54244726-54244745 None:intergenic 30.0%
! AAGAGTGAAGACTCATTTTA+GGG - chr1_3:54244625-54244644 None:intergenic 30.0%
! AAAGAGTGAAGACTCATTTT+AGG - chr1_3:54244791-54244810 None:intergenic 30.0%
ATCACTGTGTTTCATAATGA+GGG + chr1_3:54244831-54244850 Msa0125670:three_prime_UTR 30.0%
!!! CACTCTTTTTTACACTTTGT+TGG + chr1_3:54244864-54244883 Msa0125670:three_prime_UTR 30.0%
! GAATTTTCATTTTCATGCAG+GGG + chr1_3:54244909-54244928 Msa0125670:three_prime_UTR 30.0%
TGCTACTGGATTTATAGATA+AGG - chr1_3:54244955-54244974 None:intergenic 30.0%
CACAGAAAACAGTTCATTTA+TGG - chr1_3:54245007-54245026 None:intergenic 30.0%
! CATAAATGAACTGTTTTCTG+TGG + chr1_3:54245005-54245024 Msa0125670:three_prime_UTR 30.0%
!! TCGTCTACTAGATTAGTTTA+TGG - chr1_3:54245146-54245165 None:intergenic 30.0%
GACGATAAATTATTCTCACT+AGG + chr1_3:54245161-54245180 Msa0125670:three_prime_UTR 30.0%
ATATGCATCAAGTTCCAAAA+AGG - chr1_3:54245207-54245226 None:intergenic 30.0%
AATGTAATCATATATGTCGG+TGG + chr1_3:54245288-54245307 Msa0125670:three_prime_UTR 30.0%
ATATGATTGAGTGTGTGTGA+AGG - chr1_3:54239897-54239916 None:intergenic 35.0%
TGTATGTAGGAATGGAAGAT+AGG - chr1_3:54239926-54239945 None:intergenic 35.0%
CAATAACATGCAGTGTATGT+AGG - chr1_3:54239939-54239958 None:intergenic 35.0%
!! TCCTTATCTTAGGCTTTGTT+TGG + chr1_3:54240060-54240079 Msa0125670:intron 35.0%
TCCAAACAAAGCCTAAGATA+AGG - chr1_3:54240064-54240083 None:intergenic 35.0%
GTTTAAGGAATGAAAGTGAG+TGG + chr1_3:54240116-54240135 Msa0125670:intron 35.0%
GTAAGCAAGAACAAATTAGG+AGG + chr1_3:54240270-54240289 Msa0125670:intron 35.0%
AAAACATGCCTCAAAAGCAA+GGG + chr1_3:54240435-54240454 Msa0125670:intron 35.0%
TTCTTTCCTTACCTTATTCC+TGG + chr1_3:54240553-54240572 Msa0125670:intron 35.0%
CTATAAGGAAAGAAAGTGGA+AGG - chr1_3:54240622-54240641 None:intergenic 35.0%
GCATCAAACTTGAGAACTAA+GGG - chr1_3:54240665-54240684 None:intergenic 35.0%
AGCATCAAACTTGAGAACTA+AGG - chr1_3:54240666-54240685 None:intergenic 35.0%
GATGCCTTAAAACTTGTGAA+AGG + chr1_3:54240803-54240822 Msa0125670:five_prime_UTR 35.0%
! TGTCCCTTTCACAAGTTTTA+AGG - chr1_3:54240810-54240829 None:intergenic 35.0%
! ATACTACTTTGCTATCTGGA+AGG - chr1_3:54240862-54240881 None:intergenic 35.0%
! TTGCATACTACTTTGCTATC+TGG - chr1_3:54240866-54240885 None:intergenic 35.0%
TAGCAAAGTAGTATGCAAGT+TGG + chr1_3:54240868-54240887 Msa0125670:five_prime_UTR 35.0%
! CTATTTTCAGCAGTGATTTG+AGG + chr1_3:54240923-54240942 Msa0125670:five_prime_UTR 35.0%
TAAAAACTGGCTACAAAGGT+TGG - chr1_3:54241005-54241024 None:intergenic 35.0%
ACACTAAAAACTGGCTACAA+AGG - chr1_3:54241009-54241028 None:intergenic 35.0%
GTAGCAATAGAACCATTGTT+TGG + chr1_3:54241139-54241158 Msa0125670:CDS 35.0%
! GAACCATTGTTTGGTTTAGA+AGG + chr1_3:54241148-54241167 Msa0125670:CDS 35.0%
CTGTATTCCCTGTGTTTATA+TGG + chr1_3:54241223-54241242 Msa0125670:CDS 35.0%
TAGGACACCATATAAACACA+GGG - chr1_3:54241233-54241252 None:intergenic 35.0%
TTAGGACACCATATAAACAC+AGG - chr1_3:54241234-54241253 None:intergenic 35.0%
GTTTATATGGTGTCCTAAAG+AGG + chr1_3:54241236-54241255 Msa0125670:CDS 35.0%
TTTATCCAGGAAGAGTTTCA+AGG + chr1_3:54241268-54241287 Msa0125670:CDS 35.0%
GTTGTGTTTAACCATCTCTA+TGG + chr1_3:54241423-54241442 Msa0125670:CDS 35.0%
!! TGGTAAGTAGTGCTGTTTAT+AGG + chr1_3:54241443-54241462 Msa0125670:intron 35.0%
CAAAAGTTGAAGAATCAAGC+CGG + chr1_3:54241561-54241580 Msa0125670:intron 35.0%
GTTATGTGTGGCAAAATGAA+GGG - chr1_3:54241657-54241676 None:intergenic 35.0%
AGTTATGTGTGGCAAAATGA+AGG - chr1_3:54241658-54241677 None:intergenic 35.0%
! CAGCATTTTACAGTTATGTG+TGG - chr1_3:54241669-54241688 None:intergenic 35.0%
CACACATAACTGTAAAATGC+TGG + chr1_3:54241667-54241686 Msa0125670:intron 35.0%
TTTATCAGATCCTGTTTCAC+TGG + chr1_3:54241861-54241880 Msa0125670:intron 35.0%
!! CTAGCTTTTCTTTGATGTTG+TGG - chr1_3:54241894-54241913 None:intergenic 35.0%
CAACATCAAAGAAAAGCTAG+TGG + chr1_3:54241894-54241913 Msa0125670:CDS 35.0%
AAAGAAAAGCTAGTGGAACT+TGG + chr1_3:54241901-54241920 Msa0125670:CDS 35.0%
TTCTCATCATATACTTCCCA+AGG - chr1_3:54241967-54241986 None:intergenic 35.0%
! TTGGGAAGTATATGATGAGA+AGG + chr1_3:54241966-54241985 Msa0125670:CDS 35.0%
! TGGGAAGTATATGATGAGAA+GGG + chr1_3:54241967-54241986 Msa0125670:CDS 35.0%
! TTACAACCTTCGATCCTTTT+TGG + chr1_3:54241998-54242017 Msa0125670:CDS 35.0%
!! TTCTACATTGGTAGCTTTGT+TGG + chr1_3:54242143-54242162 Msa0125670:intron 35.0%
TACTTCACTACTCCAAGAAT+AGG + chr1_3:54242478-54242497 Msa0125670:CDS 35.0%
TCGCATAAAGCAGATATTGT+GGG + chr1_3:54242587-54242606 Msa0125670:CDS 35.0%
TCATTCCTGCATCAACTAAA+GGG - chr1_3:54242809-54242828 None:intergenic 35.0%
! TGAAAATGTTGCTTCTACCT+TGG + chr1_3:54242892-54242911 Msa0125670:CDS 35.0%
! AATGGGGAATGAAGTATTTC+TGG + chr1_3:54242916-54242935 Msa0125670:CDS 35.0%
! ATGGGGAATGAAGTATTTCT+GGG + chr1_3:54242917-54242936 Msa0125670:CDS 35.0%
AAAAATTGGCACATGAGGAT+GGG - chr1_3:54243199-54243218 None:intergenic 35.0%
ATCTCAAAAATTGGCACATG+AGG - chr1_3:54243204-54243223 None:intergenic 35.0%
!!! ATGTGCCAATTTTTGAGATC+TGG + chr1_3:54243205-54243224 Msa0125670:intron 35.0%
!!! TGTGCCAATTTTTGAGATCT+GGG + chr1_3:54243206-54243225 Msa0125670:intron 35.0%
GCGGTGAAGTTTAATATGAA+AGG - chr1_3:54243312-54243331 None:intergenic 35.0%
AGATTGTTTGGGAGAGATTT+CGG - chr1_3:54243757-54243776 None:intergenic 35.0%
AAGCACTTGTGAGATTGTTT+GGG - chr1_3:54243768-54243787 None:intergenic 35.0%
TAAGCACTTGTGAGATTGTT+TGG - chr1_3:54243769-54243788 None:intergenic 35.0%
!! TCTTGTTGTGAGGATCTTTT+TGG - chr1_3:54243907-54243926 None:intergenic 35.0%
!!! TTGTCCAGATTTTAGGATCT+AGG + chr1_3:54243964-54243983 Msa0125670:intron 35.0%
CAAACCTAGATCCTAAAATC+TGG - chr1_3:54243971-54243990 None:intergenic 35.0%
ATCCAGAAGGAGAATATGTA+AGG + chr1_3:54243991-54244010 Msa0125670:CDS 35.0%
AAGGAGAATATGTAAGGCAA+TGG + chr1_3:54243997-54244016 Msa0125670:CDS 35.0%
TCAAGCCATATTCAAGATGT+GGG + chr1_3:54244166-54244185 Msa0125670:CDS 35.0%
TTAGCTGAAATAGTAGCAGA+CGG - chr1_3:54244299-54244318 None:intergenic 35.0%
TGAAGAGAAGAGAAAGAACA+AGG + chr1_3:54244388-54244407 Msa0125670:CDS 35.0%
! CTTCAAATCTAAAATGGCCA+TGG + chr1_3:54244552-54244571 Msa0125670:CDS 35.0%
!! GTCTCGGTTTATTTTCTTCA+TGG - chr1_3:54244710-54244729 None:intergenic 35.0%
ACCGAGACAATTTAATCCTT+AGG + chr1_3:54244722-54244741 Msa0125670:three_prime_UTR 35.0%
!!! GAAGTTGCGTTATTTTTCTC+AGG + chr1_3:54244764-54244783 Msa0125670:three_prime_UTR 35.0%
TCTTCACTCTTTACCATCAT+AGG + chr1_3:54244799-54244818 Msa0125670:three_prime_UTR 35.0%
TGATGTAGAAAGTCCTATGA+TGG - chr1_3:54244815-54244834 None:intergenic 35.0%
CATCACTGTGTTTCATAATG+AGG + chr1_3:54244830-54244849 Msa0125670:three_prime_UTR 35.0%
! TCATGGTGCTTTTACCTTTT+TGG + chr1_3:54245190-54245209 Msa0125670:three_prime_UTR 35.0%
TTGGAACTTGATGCATATGA+AGG + chr1_3:54245209-54245228 Msa0125670:three_prime_UTR 35.0%
GACATGTATACATGCTAGTA+AGG + chr1_3:54245252-54245271 Msa0125670:three_prime_UTR 35.0%
ACATGCAGTGTATGTAGGAA+TGG - chr1_3:54239934-54239953 None:intergenic 40.0%
!! GGCTTTGTTTGGATGCAAAA+AGG + chr1_3:54240071-54240090 Msa0125670:intron 40.0%
GAAAACATGCCTCAAAAGCA+AGG + chr1_3:54240434-54240453 Msa0125670:intron 40.0%
! AGGGCAGTATTGTCATTTCA+TGG + chr1_3:54240454-54240473 Msa0125670:intron 40.0%
! GTGGGAAAGTTTTCCTATGT+GGG + chr1_3:54240515-54240534 Msa0125670:intron 40.0%
!! TGTTTGGTTTGCCAGGAATA+AGG - chr1_3:54240567-54240586 None:intergenic 40.0%
ATTCCTGGCAAACCAAACAA+TGG + chr1_3:54240568-54240587 Msa0125670:intron 40.0%
!! TTTCCATTGTTTGGTTTGCC+AGG - chr1_3:54240574-54240593 None:intergenic 40.0%
TTGAGAACTAAGGGTCTGTT+TGG - chr1_3:54240656-54240675 None:intergenic 40.0%
AAACTTGTGAAAGGGACATG+TGG + chr1_3:54240812-54240831 Msa0125670:five_prime_UTR 40.0%
AACTTGTGAAAGGGACATGT+GGG + chr1_3:54240813-54240832 Msa0125670:five_prime_UTR 40.0%
GTCCCTTCTAAACCAAACAA+TGG - chr1_3:54241154-54241173 None:intergenic 40.0%
TAGAAGGGACCTTAGAATTG+AGG + chr1_3:54241164-54241183 Msa0125670:CDS 40.0%
CTGGATTGTCCTCAATTCTA+AGG - chr1_3:54241176-54241195 None:intergenic 40.0%
ATATGGTGTCCTAAAGAGGA+AGG + chr1_3:54241240-54241259 Msa0125670:CDS 40.0%
! GAGGAAGGACAATTTTATCC+AGG + chr1_3:54241255-54241274 Msa0125670:CDS 40.0%
! GAAGCAGTCTTTAGTTCACT+TGG + chr1_3:54241299-54241318 Msa0125670:CDS 40.0%
GATCAGTCCTTGAAATCACT+TGG + chr1_3:54241321-54241340 Msa0125670:CDS 40.0%
TCTCGAACCAAGTGATTTCA+AGG - chr1_3:54241331-54241350 None:intergenic 40.0%
AGCACTACTTACCATAGAGA+TGG - chr1_3:54241437-54241456 None:intergenic 40.0%
! CGGCTTGATTCTTCAACTTT+TGG - chr1_3:54241563-54241582 None:intergenic 40.0%
GCAAAATGAAGGGTTCTCAT+CGG - chr1_3:54241647-54241666 None:intergenic 40.0%
TCCAGTAACGTTAAGCGAAA+GGG - chr1_3:54241743-54241762 None:intergenic 40.0%
TTCCAGTAACGTTAAGCGAA+AGG - chr1_3:54241744-54241763 None:intergenic 40.0%
TCAGCAGGAATTAATTGCCA+AGG - chr1_3:54242069-54242088 None:intergenic 40.0%
TGGCAATTAATTCCTGCTGA+AGG + chr1_3:54242069-54242088 Msa0125670:CDS 40.0%
TTAATGTGCATACCTTCAGC+AGG - chr1_3:54242084-54242103 None:intergenic 40.0%
! CTGAAGGTATGCACATTAAC+AGG + chr1_3:54242085-54242104 Msa0125670:intron 40.0%
CCTCTGTCGTAAAACTTCTT+TGG - chr1_3:54242182-54242201 None:intergenic 40.0%
! CCAAAGAAGTTTTACGACAG+AGG + chr1_3:54242179-54242198 Msa0125670:intron 40.0%
! AGAAGTTTTACGACAGAGGT+CGG + chr1_3:54242183-54242202 Msa0125670:intron 40.0%
TCTCTTCTGCTGTGTATTAC+AGG + chr1_3:54242315-54242334 Msa0125670:intron 40.0%
CTACTCCAAGAATAGGCAAA+AGG + chr1_3:54242485-54242504 Msa0125670:CDS 40.0%
TCCAAGAATAGGCAAAAGGT+TGG + chr1_3:54242489-54242508 Msa0125670:CDS 40.0%
! ACCAACCTTTTGCCTATTCT+TGG - chr1_3:54242493-54242512 None:intergenic 40.0%
AAGAATAGGCAAAAGGTTGG+TGG + chr1_3:54242492-54242511 Msa0125670:CDS 40.0%
TTATCCCCGTATCTCCATTT+CGG + chr1_3:54242531-54242550 Msa0125670:CDS 40.0%
AACTCTCCGAAATGGAGATA+CGG - chr1_3:54242540-54242559 None:intergenic 40.0%
CTCGCATAAAGCAGATATTG+TGG + chr1_3:54242586-54242605 Msa0125670:CDS 40.0%
CGCATAAAGCAGATATTGTG+GGG + chr1_3:54242588-54242607 Msa0125670:CDS 40.0%
! GCTCTTTTCCTTAGAGCAAT+TGG + chr1_3:54242645-54242664 Msa0125670:CDS 40.0%
CTCTTAGTCCAATTGCTCTA+AGG - chr1_3:54242656-54242675 None:intergenic 40.0%
!!! GACACTTGAGTTTTTTCCCT+TGG + chr1_3:54242733-54242752 Msa0125670:CDS 40.0%
ATCCGTCAAACTTCAAGACT+TGG + chr1_3:54242763-54242782 Msa0125670:CDS 40.0%
CTCCAAGTCTTGAAGTTTGA+CGG - chr1_3:54242768-54242787 None:intergenic 40.0%
AACTTCAAGACTTGGAGACA+AGG + chr1_3:54242771-54242790 Msa0125670:CDS 40.0%
CTCATTCCTGCATCAACTAA+AGG - chr1_3:54242810-54242829 None:intergenic 40.0%
ATGCAGGAATGAGAGAACTT+TGG + chr1_3:54242817-54242836 Msa0125670:CDS 40.0%
TGCAGGAATGAGAGAACTTT+GGG + chr1_3:54242818-54242837 Msa0125670:CDS 40.0%
! TGTTGCTTCTACCTTGGAAA+TGG + chr1_3:54242898-54242917 Msa0125670:CDS 40.0%
GTTGCTTCTACCTTGGAAAT+GGG + chr1_3:54242899-54242918 Msa0125670:CDS 40.0%
TTGCTTCTACCTTGGAAATG+GGG + chr1_3:54242900-54242919 Msa0125670:CDS 40.0%
TACTTCATTCCCCATTTCCA+AGG - chr1_3:54242912-54242931 None:intergenic 40.0%
GACCTTGAATGTGATATCCT+CGG + chr1_3:54242957-54242976 Msa0125670:CDS 40.0%
AGAAAAACGTGACAAACCTC+AGG - chr1_3:54243041-54243060 None:intergenic 40.0%
CAGAATGTGATGTGTGATAC+AGG - chr1_3:54243129-54243148 None:intergenic 40.0%
CAAAAATTGGCACATGAGGA+TGG - chr1_3:54243200-54243219 None:intergenic 40.0%
ACCACCCAGATCTCAAAAAT+TGG - chr1_3:54243213-54243232 None:intergenic 40.0%
CTTAGATGCATTTCCCTCTT+AGG + chr1_3:54243526-54243545 Msa0125670:intron 40.0%
TATTCAAACAGGGCCTAAGA+GGG - chr1_3:54243542-54243561 None:intergenic 40.0%
TTATTCAAACAGGGCCTAAG+AGG - chr1_3:54243543-54243562 None:intergenic 40.0%
! ACAGCTTTTGGACATGTCAT+AGG + chr1_3:54243725-54243744 Msa0125670:intron 40.0%
AATCTCACTTAGGGACTGTT+TGG - chr1_3:54243821-54243840 None:intergenic 40.0%
AAACAGTCCCTAAGTGAGAT+TGG + chr1_3:54243820-54243839 Msa0125670:intron 40.0%
! CGCTATTTACTCTTGTTGTG+AGG - chr1_3:54243917-54243936 None:intergenic 40.0%
TGCCTTACATATTCTCCTTC+TGG - chr1_3:54243996-54244015 None:intergenic 40.0%
TCTTGAATATGGCTTGAGTC+AGG - chr1_3:54244163-54244182 None:intergenic 40.0%
CTCAAGCCATATTCAAGATG+TGG + chr1_3:54244165-54244184 Msa0125670:CDS 40.0%
TCCAAAAGTTGTCCTCCTTA+AGG + chr1_3:54244265-54244284 Msa0125670:CDS 40.0%
! TCCTTAAGGAGGACAACTTT+TGG - chr1_3:54244269-54244288 None:intergenic 40.0%
! AGCTAATGATCAGAAAGTGC+CGG + chr1_3:54244313-54244332 Msa0125670:CDS 40.0%
TTCTTAGGATCCTGAAATGC+CGG - chr1_3:54244335-54244354 None:intergenic 40.0%
GAAGATGAGGAACATTGTTG+TGG - chr1_3:54244536-54244555 None:intergenic 40.0%
!! AGAGTGTCACAGTTTTTCTC+AGG - chr1_3:54244651-54244670 None:intergenic 40.0%
CAGTGCTCATGGAAAGAAAA+TGG + chr1_3:54244979-54244998 Msa0125670:three_prime_UTR 40.0%
TTCTCACTAGGCATAAGTCA+TGG + chr1_3:54245173-54245192 Msa0125670:three_prime_UTR 40.0%
GAAAGTGAGTGGAATGAGAG+AGG + chr1_3:54240127-54240146 Msa0125670:intron 45.0%
!! CAATACTGCCCTTGCTTTTG+AGG - chr1_3:54240446-54240465 None:intergenic 45.0%
TTGAATGCACGGAAAGGTTG+GGG - chr1_3:54240494-54240513 None:intergenic 45.0%
CTTGAATGCACGGAAAGGTT+GGG - chr1_3:54240495-54240514 None:intergenic 45.0%
ACTTTCCCACCTTGAATGCA+CGG - chr1_3:54240505-54240524 None:intergenic 45.0%
! GGTGGGAAAGTTTTCCTATG+TGG + chr1_3:54240514-54240533 Msa0125670:intron 45.0%
! TTTTATGCTGGGACCCACAT+AGG - chr1_3:54240531-54240550 None:intergenic 45.0%
GGTTTGCCAGGAATAAGGTA+AGG - chr1_3:54240562-54240581 None:intergenic 45.0%
ATCCAGGAAGAGTTTCAAGG+TGG + chr1_3:54241271-54241290 Msa0125670:CDS 45.0%
GAGTACTCTCAATGCTCTCT+TGG + chr1_3:54241371-54241390 Msa0125670:CDS 45.0%
CCAGTAACGTTAAGCGAAAG+GGG - chr1_3:54241742-54241761 None:intergenic 45.0%
GGATCTGTTGTATGAGCCTT+GGG + chr1_3:54241948-54241967 Msa0125670:CDS 45.0%
TCTCTGCCAAAAAGGATCGA+AGG - chr1_3:54242007-54242026 None:intergenic 45.0%
TGCAAGCATCTCTGCCAAAA+AGG - chr1_3:54242015-54242034 None:intergenic 45.0%
GAGATGCTTGCACAAGCAAA+TGG + chr1_3:54242023-54242042 Msa0125670:CDS 45.0%
CAAGGTGGAATAAGCGAAAC+AGG - chr1_3:54242051-54242070 None:intergenic 45.0%
CTGTTTCGCTTATTCCACCT+TGG + chr1_3:54242049-54242068 Msa0125670:CDS 45.0%
GCAGGAATTAATTGCCAAGG+TGG - chr1_3:54242066-54242085 None:intergenic 45.0%
AAACCAAGCAACGCGTTACT+AGG + chr1_3:54242390-54242409 Msa0125670:CDS 45.0%
ACTCTCCGAAATGGAGATAC+GGG - chr1_3:54242539-54242558 None:intergenic 45.0%
TCACACTCAACTCTCCGAAA+TGG - chr1_3:54242548-54242567 None:intergenic 45.0%
ATTTCGGAGAGTTGAGTGTG+AGG + chr1_3:54242547-54242566 Msa0125670:CDS 45.0%
CAGATATTGTGGGGAAACGA+AGG + chr1_3:54242597-54242616 Msa0125670:CDS 45.0%
AGTGCTCTCTCATGAGTGAA+CGG - chr1_3:54242708-54242727 None:intergenic 45.0%
!! ACTCATGAGAGAGCACTTCT+TGG + chr1_3:54242711-54242730 Msa0125670:CDS 45.0%
! TTGACGGATCAGCATTCCAA+GGG - chr1_3:54242752-54242771 None:intergenic 45.0%
! TTTGACGGATCAGCATTCCA+AGG - chr1_3:54242753-54242772 None:intergenic 45.0%
TCAAGACTTGGAGACAAGGT+AGG + chr1_3:54242775-54242794 Msa0125670:CDS 45.0%
ATGAGAGAACTTTGGGCTAC+AGG + chr1_3:54242825-54242844 Msa0125670:CDS 45.0%
!!! GTATTTCTGGGACACGCTTT+TGG + chr1_3:54242929-54242948 Msa0125670:CDS 45.0%
AGCCGAGGATATCACATTCA+AGG - chr1_3:54242962-54242981 None:intergenic 45.0%
TTGAATGTGATATCCTCGGC+TGG + chr1_3:54242961-54242980 Msa0125670:CDS 45.0%
ATCTCAGGATGCTTACCAGA+CGG + chr1_3:54242990-54243009 Msa0125670:CDS 45.0%
!!! GCCAATTTTTGAGATCTGGG+TGG + chr1_3:54243209-54243228 Msa0125670:intron 45.0%
CACTTAGGGACTGTTTGGAT+TGG - chr1_3:54243816-54243835 None:intergenic 45.0%
GGATCTAGGTTTGATCCAGA+AGG + chr1_3:54243978-54243997 Msa0125670:CDS 45.0%
ACACTAAGTGGTGCATTCCA+AGG - chr1_3:54244065-54244084 None:intergenic 45.0%
! GATGCTCTAAGCACACTAAG+TGG - chr1_3:54244077-54244096 None:intergenic 45.0%
! CTTAGTGTGCTTAGAGCATC+AGG + chr1_3:54244077-54244096 Msa0125670:CDS 45.0%
CAAGCAGCATCAAAAGCTTC+TGG + chr1_3:54244194-54244213 Msa0125670:CDS 45.0%
!! ACGGAGCTTTTTCCTTAAGG+AGG - chr1_3:54244280-54244299 None:intergenic 45.0%
!! CAGACGGAGCTTTTTCCTTA+AGG - chr1_3:54244283-54244302 None:intergenic 45.0%
CTGTAGAGCAAGTGTCTTCA+TGG - chr1_3:54244460-54244479 None:intergenic 45.0%
ATGTCTGTCTGTTCTTGCCA+TGG - chr1_3:54244572-54244591 None:intergenic 45.0%
ATGGCAAGAACAGACAGACA+TGG + chr1_3:54244571-54244590 Msa0125670:CDS 45.0%
!! ATTCATATAATTATATATAA+GGG - chr1_3:54240247-54240266 None:intergenic 5.0%
CCTTGAATGCACGGAAAGGT+TGG - chr1_3:54240496-54240515 None:intergenic 50.0%
CCAACCTTTCCGTGCATTCA+AGG + chr1_3:54240493-54240512 Msa0125670:intron 50.0%
ACCTTTCCGTGCATTCAAGG+TGG + chr1_3:54240496-54240515 Msa0125670:intron 50.0%
CCTTTCCGTGCATTCAAGGT+GGG + chr1_3:54240497-54240516 Msa0125670:intron 50.0%
!!! CATGTGGGCTGAGTTGGTTT+TGG + chr1_3:54240828-54240847 Msa0125670:five_prime_UTR 50.0%
CACCACCTTGAAACTCTTCC+TGG - chr1_3:54241276-54241295 None:intergenic 50.0%
CAGGAAGAGTTTCAAGGTGG+TGG + chr1_3:54241274-54241293 Msa0125670:CDS 50.0%
CCCCTTTCGCTTAACGTTAC+TGG + chr1_3:54241739-54241758 Msa0125670:intron 50.0%
TGGTCTCGAACCAGTGAAAC+AGG - chr1_3:54241874-54241893 None:intergenic 50.0%
GGGATCTGTTGTATGAGCCT+TGG + chr1_3:54241947-54241966 Msa0125670:CDS 50.0%
TTGTCAGCATTGCTCCAACC+TGG - chr1_3:54242429-54242448 None:intergenic 50.0%
AGGTTGGAGCAATGCTGACA+AGG + chr1_3:54242428-54242447 Msa0125670:CDS 50.0%
CTCTCCGAAATGGAGATACG+GGG - chr1_3:54242538-54242557 None:intergenic 50.0%
GGAAACGAAGGCAACAGTGT+TGG + chr1_3:54242609-54242628 Msa0125670:CDS 50.0%
ACTTGGAGACAAGGTAGGAC+TGG + chr1_3:54242780-54242799 Msa0125670:CDS 50.0%
! GGCTACCCTTTAGTTGATGC+AGG + chr1_3:54242801-54242820 Msa0125670:CDS 50.0%
GAGAACTTTGGGCTACAGGA+TGG + chr1_3:54242829-54242848 Msa0125670:CDS 50.0%
AAGGCAATGGCTACCTGAGT+TGG + chr1_3:54244010-54244029 Msa0125670:CDS 50.0%
!! GGATGATGGATCCACTCAGT+TGG - chr1_3:54244044-54244063 None:intergenic 50.0%
CTGAGTGGATCCATCATCCT+TGG + chr1_3:54244045-54244064 Msa0125670:CDS 50.0%
GTGGTGCATTCCAAGGATGA+TGG - chr1_3:54244058-54244077 None:intergenic 50.0%
! GGCTTGAGTCAGGTTTTCTC+TGG - chr1_3:54244153-54244172 None:intergenic 50.0%
!! AAGCTTCTGGCTCTGAAGCA+AGG + chr1_3:54244207-54244226 Msa0125670:CDS 50.0%
!! AGCTTCTGGCTCTGAAGCAA+GGG + chr1_3:54244208-54244227 Msa0125670:CDS 50.0%
!! TCAGAAAGTGCCGGCATTTC+AGG + chr1_3:54244322-54244341 Msa0125670:CDS 50.0%
ACAGACATGGAGCAAAGCTC+AGG + chr1_3:54244584-54244603 Msa0125670:CDS 50.0%
CAGACATGGAGCAAAGCTCA+GGG + chr1_3:54244585-54244604 Msa0125670:CDS 50.0%
GAGCAAAGCTCAGGGAAAGA+TGG + chr1_3:54244593-54244612 Msa0125670:CDS 50.0%
CCCACCTTGAATGCACGGAA+AGG - chr1_3:54240500-54240519 None:intergenic 55.0%
! AAGGGACATGTGGGCTGAGT+TGG + chr1_3:54240822-54240841 Msa0125670:five_prime_UTR 55.0%
AGCACTAGCTGCTGCTGCTA+GGG + chr1_3:54241194-54241213 Msa0125670:CDS 55.0%
CGTCCTAGTAACGCGTTGCT+TGG - chr1_3:54242396-54242415 None:intergenic 55.0%
ACGCGTTACTAGGACGAGCA+TGG + chr1_3:54242400-54242419 Msa0125670:CDS 55.0%
ATACGGGGATAACAGCGAGG+TGG - chr1_3:54242523-54242542 None:intergenic 55.0%
GAGATACGGGGATAACAGCG+AGG - chr1_3:54242526-54242545 None:intergenic 55.0%
CTGAGATATACTGCCAGCCG+AGG - chr1_3:54242977-54242996 None:intergenic 55.0%
CTCGGCTGGCAGTATATCTC+AGG + chr1_3:54242975-54242994 Msa0125670:CDS 55.0%
TGAGCGCTTGGATGATCCTG+AGG + chr1_3:54243022-54243041 Msa0125670:CDS 55.0%
GTTGGCATTCTCGCCAACTC+AGG - chr1_3:54244026-54244045 None:intergenic 55.0%
TGGCGAGAATGCCAACTGAG+TGG + chr1_3:54244030-54244049 Msa0125670:CDS 55.0%
! AGAGCATCAGGAGTCGAGCT+AGG + chr1_3:54244089-54244108 Msa0125670:CDS 55.0%
! CATTTTCATGCAGGGGCGAC+AGG + chr1_3:54244916-54244935 Msa0125670:three_prime_UTR 55.0%
! ATGAGCACTGCAGCTGCTAC+TGG - chr1_3:54244969-54244988 None:intergenic 55.0%
AGTAGCAGCTGCAGTGCTCA+TGG + chr1_3:54244968-54244987 Msa0125670:three_prime_UTR 55.0%
CTAGCAGCAGCAGCTAGTGC+TGG - chr1_3:54241195-54241214 None:intergenic 60.0%
CAGCACTAGCTGCTGCTGCT+AGG + chr1_3:54241193-54241212 Msa0125670:CDS 60.0%
CTAGCTGCTGCTGCTAGGGA+TGG + chr1_3:54241198-54241217 Msa0125670:CDS 60.0%
CTAGGACGAGCATGGTCTCC+AGG + chr1_3:54242408-54242427 Msa0125670:CDS 60.0%
GACGAGCATGGTCTCCAGGT+TGG + chr1_3:54242412-54242431 Msa0125670:CDS 60.0%
TTTCATGCAGGGGCGACAGG+AGG + chr1_3:54244919-54244938 Msa0125670:three_prime_UTR 60.0%
CGCTCAAGCTCGTGACCGTC+TGG - chr1_3:54243008-54243027 None:intergenic 65.0%
CGGTCACGAGCTTGAGCGCT+TGG + chr1_3:54243010-54243029 Msa0125670:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 54239889 54245381 54239889 ID=Msa0125670;Name=Msa0125670
chr1_3 mRNA 54239889 54245381 54239889 ID=Msa0125670-mRNA-1;Parent=Msa0125670;Name=Msa0125670-mRNA-1;_AED=0.05;_eAED=0.05;_QI=649|1|1|1|0.75|0.6|5|729|639
chr1_3 exon 54239889 54240071 54239889 ID=Msa0125670-mRNA-1:exon:16692;Parent=Msa0125670-mRNA-1
chr1_3 exon 54240669 54241444 54240669 ID=Msa0125670-mRNA-1:exon:16693;Parent=Msa0125670-mRNA-1
chr1_3 exon 54241869 54242090 54241869 ID=Msa0125670-mRNA-1:exon:16694;Parent=Msa0125670-mRNA-1
chr1_3 exon 54242337 54243043 54242337 ID=Msa0125670-mRNA-1:exon:16695;Parent=Msa0125670-mRNA-1
chr1_3 exon 54243972 54245381 54243972 ID=Msa0125670-mRNA-1:exon:16696;Parent=Msa0125670-mRNA-1
chr1_3 five_prime_UTR 54239889 54240071 54239889 ID=Msa0125670-mRNA-1:five_prime_utr;Parent=Msa0125670-mRNA-1
chr1_3 five_prime_UTR 54240669 54241134 54240669 ID=Msa0125670-mRNA-1:five_prime_utr;Parent=Msa0125670-mRNA-1
chr1_3 CDS 54241135 54241444 54241135 ID=Msa0125670-mRNA-1:cds;Parent=Msa0125670-mRNA-1
chr1_3 CDS 54241869 54242090 54241869 ID=Msa0125670-mRNA-1:cds;Parent=Msa0125670-mRNA-1
chr1_3 CDS 54242337 54243043 54242337 ID=Msa0125670-mRNA-1:cds;Parent=Msa0125670-mRNA-1
chr1_3 CDS 54243972 54244652 54243972 ID=Msa0125670-mRNA-1:cds;Parent=Msa0125670-mRNA-1
chr1_3 three_prime_UTR 54244653 54245381 54244653 ID=Msa0125670-mRNA-1:three_prime_utr;Parent=Msa0125670-mRNA-1
Gene Sequence

>Msa0125670

ATGGGTAGCAATAGAACCATTGTTTGGTTTAGAAGGGACCTTAGAATTGAGGACAATCCAGCACTAGCTGCTGCTGCTAGGGATGGTTCTGTATTCCCTGTGTTTATATGGTGTCCTAAAGAGGAAGGACAATTTTATCCAGGAAGAGTTTCAAGGTGGTGGCTGAAGCAGTCTTTAGTTCACTTGGATCAGTCCTTGAAATCACTTGGTTCGAGACTCGTGTTGATCAAAACTGAGAGTACTCTCAATGCTCTCTTGGATTGTATAAATTCTATTCAAGCTACAAAAGTTGTGTTTAACCATCTCTATGATCCTGTTTCACTGGTTCGAGACCACAACATCAAAGAAAAGCTAGTGGAACTTGGCTTATCAGTGAAAAGCTATAATGGGGATCTGTTGTATGAGCCTTGGGAAGTATATGATGAGAAGGGACATGCTTTTACAACCTTCGATCCTTTTTGGCAGAGATGCTTGCACAAGCAAATGGAACCTGTTTCGCTTATTCCACCTTGGCAATTAATTCCTGCTGAAGGAAAAGTCAAGAAATGTTCAATAGAGGATTTAGGTCTCGAAAATGAATTAGAAAAACCAAGCAACGCGTTACTAGGACGAGCATGGTCTCCAGGTTGGAGCAATGCTGACAAGGCTTTAACAGAATTTATGGACAAGCAGCTACTTCACTACTCCAAGAATAGGCAAAAGGTTGGTGGAGACTCCACCTCGCTGTTATCCCCGTATCTCCATTTCGGAGAGTTGAGTGTGAGGAAAGTTTTTCAAATGGCTCGCATAAAGCAGATATTGTGGGGAAACGAAGGCAACAGTGTTGGAGAAGAAAGTGTAGCTCTTTTCCTTAGAGCAATTGGACTAAGAGAGTACTCGCGTTATCTTTGTTTCAATTTTCCGTTCACTCATGAGAGAGCACTTCTTGGACACTTGAGTTTTTTCCCTTGGAATGCTGATCCGTCAAACTTCAAGACTTGGAGACAAGGTAGGACTGGCTACCCTTTAGTTGATGCAGGAATGAGAGAACTTTGGGCTACAGGATGGATGCATAACCGAATCAGAGTTATAGTTTCAAGTTTTGCTGTGAAAATGTTGCTTCTACCTTGGAAATGGGGAATGAAGTATTTCTGGGACACGCTTTTGGATGCAGACCTTGAATGTGATATCCTCGGCTGGCAGTATATCTCAGGATGCTTACCAGACGGTCACGAGCTTGAGCGCTTGGATGATCCTGAGATTTTAGGATCTAGGTTTGATCCAGAAGGAGAATATGTAAGGCAATGGCTACCTGAGTTGGCGAGAATGCCAACTGAGTGGATCCATCATCCTTGGAATGCACCACTTAGTGTGCTTAGAGCATCAGGAGTCGAGCTAGGTCAAAACTATCCGAATCCAATAATTGATATAGATATGGCCAGAGAAAACCTGACTCAAGCCATATTCAAGATGTGGGAAATTCAAGCAGCATCAAAAGCTTCTGGCTCTGAAGCAAGGGATGAAGTTGTTGCTGAAAGTGAATATCTAGACATTCCAAAAGTTGTCCTCCTTAAGGAAAAAGCTCCGTCTGCTACTATTTCAGCTAATGATCAGAAAGTGCCGGCATTTCAGGATCCTAAGAATGAACTACCTATTAGGAAGAGAACAAAATGTTTTGAAGAGAAGAGAAAGAACAAGGAAAATTCCGTGAATCATGTGAAAGATAGTAATGTTTCAAGCTCTGACCATGAAGACACTTGCTCTACAGCTGACTCTTCACGTAAGAAGCAGTGTAGTACAAGCACCTATTCATTTTCTGTTCCACAACAATGTTCCTCATCTTCAAATCTAAAATGGCCATGGCAAGAACAGACAGACATGGAGCAAAGCTCAGGGAAAGATGGTAAGCGTATAAGAGTGAAGACTCATTTTAGTGCCTGA
Protein sequence

>Msa0125670

MGSNRTIVWFRRDLRIEDNPALAAAARDGSVFPVFIWCPKEEGQFYPGRVSRWWLKQSLVHLDQSLKSLGSRLVLIKTESTLNALLDCINSIQATKVVFNHLYDPVSLVRDHNIKEKLVELGLSVKSYNGDLLYEPWEVYDEKGHAFTTFDPFWQRCLHKQMEPVSLIPPWQLIPAEGKVKKCSIEDLGLENELEKPSNALLGRAWSPGWSNADKALTEFMDKQLLHYSKNRQKVGGDSTSLLSPYLHFGELSVRKVFQMARIKQILWGNEGNSVGEESVALFLRAIGLREYSRYLCFNFPFTHERALLGHLSFFPWNADPSNFKTWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKMLLLPWKWGMKYFWDTLLDADLECDILGWQYISGCLPDGHELERLDDPEILGSRFDPEGEYVRQWLPELARMPTEWIHHPWNAPLSVLRASGVELGQNYPNPIIDIDMARENLTQAIFKMWEIQAASKASGSEARDEVVAESEYLDIPKVVLLKEKAPSATISANDQKVPAFQDPKNELPIRKRTKCFEEKRKNKENSVNHVKDSNVSSSDHEDTCSTADSSRKKQCSTSTYSFSVPQQCSSSSNLKWPWQEQTDMEQSSGKDGKRIRVKTHFSA*