AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0116770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0116770 MtrunA17_Chr1g0173371 76.093 732 89 9 37 691 258 980 0.0 1049
Msa0116770 MtrunA17_Chr1g0173371 28.631 241 150 6 174 403 22 251 2.66e-20 96.3
Msa0116770 MtrunA17_Chr7g0257461 58.073 737 216 13 37 691 258 983 0.0 716
Msa0116770 MtrunA17_Chr7g0257461 26.641 259 161 8 174 421 22 262 7.54e-18 88.2
Msa0116770 MtrunA17_Chr2g0298121 45.730 363 194 3 36 397 257 617 2.37e-104 340
Msa0116770 MtrunA17_Chr2g0298121 24.611 642 343 20 72 691 440 962 1.66e-29 125
Msa0116770 MtrunA17_Chr2g0298121 27.749 191 126 3 173 362 21 200 1.21e-16 84.3
Msa0116770 MtrunA17_Chr3g0104551 32.175 662 382 14 50 691 270 884 1.07e-95 315
Msa0116770 MtrunA17_Chr3g0104551 24.737 190 132 3 173 362 21 199 1.98e-11 67.4
Msa0116770 MtrunA17_Chr4g0072071 42.411 224 128 1 174 397 41 263 4.05e-53 193
Msa0116770 MtrunA17_Chr4g0072071 25.155 644 333 23 72 691 86 604 1.90e-32 133
Msa0116770 MtrunA17_Chr4g0072061 50.000 130 64 1 46 175 212 340 1.97e-37 143
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0116770 AT2G41740.2 52.517 735 253 17 38 691 257 976 0.0 671
Msa0116770 AT2G41740.2 28.571 238 147 7 174 400 20 245 3.15e-18 90.1
Msa0116770 AT2G41740.1 52.517 735 253 17 38 691 257 976 0.0 671
Msa0116770 AT2G41740.1 28.571 238 147 7 174 400 20 245 3.15e-18 90.1
Msa0116770 AT3G57410.4 70.959 365 106 0 37 401 258 622 0.0 560
Msa0116770 AT3G57410.4 36.421 637 302 18 56 691 431 965 1.43e-68 242
Msa0116770 AT3G57410.4 28.319 226 134 7 174 385 22 233 2.54e-16 84.0
Msa0116770 AT3G57410.1 70.959 365 106 0 37 401 258 622 0.0 560
Msa0116770 AT3G57410.1 36.421 637 302 18 56 691 431 965 1.43e-68 242
Msa0116770 AT3G57410.1 28.319 226 134 7 174 385 22 233 2.54e-16 84.0
Msa0116770 AT3G57410.9 70.959 365 106 0 37 401 258 622 0.0 560
Msa0116770 AT3G57410.9 36.421 637 302 18 56 691 431 965 1.43e-68 242
Msa0116770 AT3G57410.9 28.319 226 134 7 174 385 22 233 2.54e-16 84.0
Msa0116770 AT3G57410.5 70.959 365 106 0 37 401 258 622 0.0 560
Msa0116770 AT3G57410.5 36.421 637 302 18 56 691 431 965 1.43e-68 242
Msa0116770 AT3G57410.5 28.319 226 134 7 174 385 22 233 2.54e-16 84.0
Msa0116770 AT3G57410.3 70.959 365 106 0 37 401 258 622 0.0 560
Msa0116770 AT3G57410.3 36.421 637 302 18 56 691 431 965 1.43e-68 242
Msa0116770 AT3G57410.3 28.319 226 134 7 174 385 22 233 2.54e-16 84.0
Msa0116770 AT3G57410.2 70.959 365 106 0 37 401 258 622 0.0 560
Msa0116770 AT3G57410.2 36.421 637 302 18 56 691 431 965 1.43e-68 242
Msa0116770 AT3G57410.2 28.319 226 134 7 174 385 22 233 2.54e-16 84.0
Msa0116770 AT3G57410.7 70.959 365 106 0 37 401 258 622 0.0 560
Msa0116770 AT3G57410.7 36.421 637 302 18 56 691 431 965 1.43e-68 242
Msa0116770 AT3G57410.7 28.319 226 134 7 174 385 22 233 2.54e-16 84.0
Msa0116770 AT3G57410.8 70.959 365 106 0 37 401 258 622 0.0 560
Msa0116770 AT3G57410.8 36.421 637 302 18 56 691 431 965 1.43e-68 242
Msa0116770 AT3G57410.8 28.319 226 134 7 174 385 22 233 2.54e-16 84.0
Msa0116770 AT3G57410.6 70.959 365 106 0 37 401 258 622 0.0 559
Msa0116770 AT3G57410.6 29.241 448 223 15 56 502 431 785 1.53e-27 119
Msa0116770 AT3G57410.6 28.319 226 134 7 174 385 22 233 3.82e-16 83.2
Msa0116770 AT3G57410.10 70.959 365 106 0 37 401 258 622 0.0 558
Msa0116770 AT3G57410.10 28.319 226 134 7 174 385 22 233 3.36e-16 83.2
Msa0116770 AT3G57410.10 24.737 380 195 13 56 434 431 720 5.09e-13 73.2
Msa0116770 AT4G30160.2 34.846 749 390 17 27 691 249 983 6.74e-126 398
Msa0116770 AT4G30160.2 28.497 193 122 5 173 362 21 200 3.51e-18 89.7
Msa0116770 AT4G30160.3 35.230 738 393 16 27 691 249 974 1.03e-124 394
Msa0116770 AT4G30160.3 28.497 193 122 5 173 362 21 200 3.59e-18 89.7
Msa0116770 AT4G30160.4 35.230 738 393 16 27 691 249 974 1.03e-124 394
Msa0116770 AT4G30160.4 28.497 193 122 5 173 362 21 200 3.59e-18 89.7
Msa0116770 AT4G30160.1 35.230 738 393 16 27 691 249 974 1.03e-124 394
Msa0116770 AT4G30160.1 28.497 193 122 5 173 362 21 200 3.59e-18 89.7
Msa0116770 AT5G57320.2 44.044 361 197 4 37 394 258 616 2.40e-97 321
Msa0116770 AT5G57320.2 25.937 694 365 24 27 691 389 962 4.74e-33 137
Msa0116770 AT5G57320.2 26.154 260 163 6 173 421 21 262 1.69e-18 90.9
Msa0116770 AT5G57320.1 44.044 361 197 4 37 394 258 616 2.40e-97 321
Msa0116770 AT5G57320.1 25.937 694 365 24 27 691 389 962 4.74e-33 137
Msa0116770 AT5G57320.1 26.154 260 163 6 173 421 21 262 1.69e-18 90.9
Msa0116770 AT2G29890.1 38.953 344 205 2 50 393 272 610 4.84e-74 257
Msa0116770 AT2G29890.1 22.794 680 358 22 26 691 383 909 1.04e-21 100
Msa0116770 AT2G29890.1 28.251 223 139 5 173 385 21 232 1.53e-17 87.8
Msa0116770 AT2G29890.5 38.953 344 205 2 50 393 272 610 4.84e-74 257
Msa0116770 AT2G29890.5 22.794 680 358 22 26 691 383 909 1.04e-21 100
Msa0116770 AT2G29890.5 28.251 223 139 5 173 385 21 232 1.53e-17 87.8
Msa0116770 AT2G29890.2 38.953 344 205 2 50 393 272 610 5.12e-74 257
Msa0116770 AT2G29890.2 25.201 373 175 9 320 691 642 911 2.04e-21 100
Msa0116770 AT2G29890.2 28.251 223 139 5 173 385 21 232 1.52e-17 87.8
Msa0116770 AT2G29890.3 38.953 344 205 2 50 393 272 610 6.23e-74 257
Msa0116770 AT2G29890.3 26.289 388 174 10 320 691 642 933 4.89e-18 89.4
Msa0116770 AT2G29890.3 28.251 223 139 5 173 385 21 232 1.58e-17 87.8
Msa0116770 AT2G29890.4 38.081 344 191 4 50 393 272 593 4.84e-66 234
Msa0116770 AT2G29890.4 24.895 474 232 14 220 691 541 892 9.83e-22 101
Msa0116770 AT2G29890.4 28.251 223 139 5 173 385 21 232 1.35e-17 87.8

Find 220 sgRNAs with CRISPR-Local

Find 1814 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTCTGTTACTTTATATA+AGG 0.143430 1_3:+35988421 None:intergenic
ACTTGCTACTGAAAATTATT+TGG 0.157865 1_3:-35979089 Msa0116770:three_prime_UTR
GTACAGAAAGCTCAGCTTTC+TGG 0.168140 1_3:-35989072 Msa0116770:CDS
TATCTCCAGGAGTTTGTTTC+TGG 0.168900 1_3:-35993957 Msa0116770:intron
CAGACAGTGTTCGTTGAAAA+AGG 0.208326 1_3:-36000773 Msa0116770:five_prime_UTR
CTTGTTATCCTTGTAGATTT+TGG 0.211825 1_3:+35993924 None:intergenic
ATCACATGAAATGAATTTCT+AGG 0.212121 1_3:-35978678 Msa0116770:three_prime_UTR
TTAAGTCTAACTTTGATTCT+TGG 0.218212 1_3:-35993872 Msa0116770:CDS
CATAGATATGGCTGCATCTT+TGG 0.219462 1_3:-35988465 Msa0116770:CDS
AGAGTAGAGACACCTGTTTC+TGG 0.228660 1_3:+35987981 None:intergenic
CCATTGCCCAAATCTGAATA+TGG 0.234806 1_3:-36000299 Msa0116770:exon
AGAACTAAATGCGGAGTTTA+AGG 0.252036 1_3:+35985895 None:intergenic
AAGAAGTAGCAGCAATTAAA+AGG 0.277919 1_3:+35979267 None:intergenic
CTTGAAATGCACTTACCTAT+TGG 0.281130 1_3:-35979364 Msa0116770:three_prime_UTR
GTCTAACACTCTGAAGGTTT+TGG 0.281478 1_3:-36000737 Msa0116770:five_prime_UTR
CCACCCCATGGTAGTTCTTA+AGG 0.281506 1_3:-35991283 Msa0116770:intron
CTCATTAGTAACTTTCTTGC+TGG 0.283097 1_3:+35989021 None:intergenic
GAATTTCCCATATTCAGATT+TGG 0.289971 1_3:+36000292 None:intergenic
CAAAGGTCGCAGAATTTCTA+AGG 0.302885 1_3:-35990839 Msa0116770:CDS
AGTTTGTTTCTGGCCAAAAT+AGG 0.306742 1_3:-35993947 Msa0116770:CDS
TACTTCTTGTGCTGCTGGTT+TGG 0.318877 1_3:-35993414 Msa0116770:CDS
AAACAGGTGTCTCTACTCTT+TGG 0.322037 1_3:-35987977 Msa0116770:CDS
CAACAAGGGATGGGTGTAAA+AGG 0.323010 1_3:-35993708 Msa0116770:CDS
CGAAGAAAGAAGGTTTGAAT+TGG 0.323406 1_3:+36002874 None:intergenic
CTTTGAAGATCCAGTCAAAT+TGG 0.323597 1_3:+35978598 None:intergenic
AAAATCTTCGTCTGAAAGAT+AGG 0.326812 1_3:+35979538 None:intergenic
AATTTCCCATATTCAGATTT+GGG 0.328535 1_3:+36000293 None:intergenic
ACTCCTAGGCCATCTGTAAA+AGG 0.329533 1_3:-35985851 Msa0116770:CDS
CTTGTGCTGCCTTATTGTTA+TGG 0.342095 1_3:+35991073 None:intergenic
AACTTTGATTCTTGGCCATC+AGG 0.343198 1_3:-35993864 Msa0116770:CDS
AACAGGTGTCTCTACTCTTT+GGG 0.351499 1_3:-35987976 Msa0116770:CDS
TGTGGAATTTCCTCATTTAC+AGG 0.354612 1_3:+35993669 None:intergenic
GCTGCTAAAGCCCTTGCTTT+AGG 0.359579 1_3:-35979211 Msa0116770:three_prime_UTR
TCAGCTTTCTGGCTTGCATT+AGG 0.367655 1_3:-35989061 Msa0116770:CDS
CTCCTGATTCCGATAGCAAT+GGG 0.368283 1_3:-35979894 Msa0116770:CDS
TTTGAAGGGTAGACCTGTTC+AGG 0.369323 1_3:-35991423 Msa0116770:intron
GTGGTGCTGAGGTATTTATC+TGG 0.370632 1_3:-35994102 Msa0116770:CDS
CTCTTTGTCTTGGTCCTCCA+TGG 0.382592 1_3:+35985933 None:intergenic
AAAGCTTCTGCCCTTTGTCT+TGG 0.386736 1_3:+35986407 None:intergenic
GGCTTTAGCAGCCTTACCTT+GGG 0.387652 1_3:+35979222 None:intergenic
CCTTCTGTTACTTTATATAA+GGG 0.389348 1_3:+35988422 None:intergenic
GCTTGAGAAAACAACGAGTA+TGG 0.390812 1_3:-35986354 Msa0116770:intron
GAACAACAAATGCTATTTGC+TGG 0.392778 1_3:-35994128 Msa0116770:CDS
ACTTCAGAAATACATAGATA+TGG 0.393668 1_3:-35988477 Msa0116770:intron
TTTCTTTCATTTGGTTAGAA+AGG 0.393954 1_3:-35978973 Msa0116770:three_prime_UTR
GATGGAAAAGGGAAAGTTAC+AGG 0.400466 1_3:-35993819 Msa0116770:intron
AAGACAAAGGGCAGAAGCTT+TGG 0.411602 1_3:-35986405 Msa0116770:CDS
AGAAACTTCTTCCACTTCCT+TGG 0.413003 1_3:+35979915 None:intergenic
GCTGAGGTATTTATCTGGTT+TGG 0.414615 1_3:-35994097 Msa0116770:CDS
GTACTGTACACATACCATTC+TGG 0.420131 1_3:-35993453 Msa0116770:CDS
GGATGGAAGTTCCAGTGATT+CGG 0.420933 1_3:+35991094 None:intergenic
TTCTTATTACTTCAGGTTCA+CGG 0.422765 1_3:-35988013 Msa0116770:intron
TCAGATTTGGGCAATGGAAC+CGG 0.423071 1_3:+36000305 None:intergenic
TCAGATTACAATACCTGAAC+AGG 0.429347 1_3:+35991410 None:intergenic
CCAACCGAATAGCCATTGTT+TGG 0.429612 1_3:+35991465 None:intergenic
GATAAAACACACTATCCAAT+AGG 0.431709 1_3:+35979349 None:intergenic
GGGCTTTAGCAGCCTTACCT+TGG 0.431888 1_3:+35979221 None:intergenic
AACTTCCATCCATAACAATA+AGG 0.432163 1_3:-35991082 Msa0116770:CDS
GGATTCATATATCATCTTGC+AGG 0.432702 1_3:-36000261 Msa0116770:intron
CGGGAACTCATTCCAGAAAC+AGG 0.435091 1_3:-35987993 Msa0116770:CDS
TAAAATGAGAAAATGCATAG+TGG 0.439916 1_3:-35978643 Msa0116770:three_prime_UTR
CAACATTGGTTTACATATTG+TGG 0.442680 1_3:-35979066 Msa0116770:three_prime_UTR
TACAATGTCCAACTCTTTGA+AGG 0.443720 1_3:-35991438 Msa0116770:CDS
GGATCCTGCATTCCAGGGAG+TGG 0.443946 1_3:-36000716 Msa0116770:five_prime_UTR
TGTCTAGGATTGATCTTAAA+CGG 0.444135 1_3:-35979768 Msa0116770:CDS
GTTGTAGAGGAACTGAAATA+TGG 0.444834 1_3:-36000346 Msa0116770:intron
CTTTCATTTGGTTAGAAAGG+TGG 0.445488 1_3:-35978970 Msa0116770:three_prime_UTR
AGCAGGTCTCGCTTCCATCT+TGG 0.446014 1_3:+35979473 None:intergenic
TTTCATTTGGTTAGAAAGGT+GGG 0.446113 1_3:-35978969 Msa0116770:three_prime_UTR
AAGACTACTTCTTGTGCTGC+TGG 0.448884 1_3:-35993419 Msa0116770:CDS
ATTCCTTGCAGTATCATTGA+TGG 0.449659 1_3:-35994196 Msa0116770:intron
CCATATTCAGATTTGGGCAA+TGG 0.449681 1_3:+36000299 None:intergenic
CTGGCCACAGGAGAGGTATC+AGG 0.449973 1_3:+35985755 None:intergenic
ATCACTCACGCTGATTTGAC+TGG 0.454399 1_3:-35978707 Msa0116770:three_prime_UTR
AGGACCAAACAATGGCTATT+CGG 0.454639 1_3:-35991469 Msa0116770:CDS
TATGATTTACACTTCTGGAT+TGG 0.454884 1_3:-35999547 Msa0116770:CDS
AAAGCTTCCGCTCTTTGTCT+TGG 0.456698 1_3:+35985923 None:intergenic
GCAATGAAGACACTAGAAAC+TGG 0.458038 1_3:-35979044 Msa0116770:three_prime_UTR
GATCAATTAAAGACTACATC+AGG 0.462111 1_3:-35979799 Msa0116770:CDS
TGCTGCCTTATTGTTATGGA+TGG 0.462905 1_3:+35991077 None:intergenic
CCACCTTCTTCAAGCAAATG+TGG 0.464056 1_3:+35993651 None:intergenic
AGCCAGAGAATGAATCAAAA+TGG 0.464150 1_3:+36002969 None:intergenic
TGAAAATTATTTGGCAACAT+TGG 0.466084 1_3:-35979080 Msa0116770:three_prime_UTR
ATCAAACGGGTCAAGTGGAG+GGG 0.466560 1_3:-35986432 Msa0116770:CDS
AGGTATTTATCTGGTTTGGC+CGG 0.466701 1_3:-35994093 Msa0116770:CDS
ATTCCACATTTGCTTGAAGA+AGG 0.468779 1_3:-35993654 Msa0116770:CDS
CAGTCACAAGAGAGATTGAA+TGG 0.470209 1_3:-35985962 Msa0116770:CDS
GCTAGTACTGTTGCCGAGGA+TGG 0.473687 1_3:-35993837 Msa0116770:CDS
TCTTATTACTTCAGGTTCAC+GGG 0.476574 1_3:-35988012 Msa0116770:intron
GCTTGAAGAAGGTGGAAAGA+TGG 0.477996 1_3:-35993643 Msa0116770:CDS
CATTGCCCAAATCTGAATAT+GGG 0.479396 1_3:-36000298 Msa0116770:exon
GTTCTTCCACTTGTGTTCCC+CGG 0.480845 1_3:+35994074 None:intergenic
TCAAACGGGTCAAGTGGAGG+GGG 0.482923 1_3:-35986431 Msa0116770:CDS
GCTTTAAAGCATGCTAAAGA+AGG 0.483642 1_3:-35989094 Msa0116770:CDS
TGACCCACTCCCTGGAATGC+AGG 0.484079 1_3:+36000712 None:intergenic
AAGAAGGTTTGAATTGGTTG+TGG 0.484598 1_3:+36002880 None:intergenic
ACTGTTGCCGAGGATGGAAA+AGG 0.486284 1_3:-35993831 Msa0116770:CDS
GTGTCTCTACTCTTTGGGAT+TGG 0.491928 1_3:-35987971 Msa0116770:CDS
CTTCTTTCCTCTCACCAGAA+TGG 0.492636 1_3:+35993439 None:intergenic
AGAGAGAAGACGAAGAAAGA+AGG 0.493388 1_3:+36002864 None:intergenic
GGTATTTATCTGGTTTGGCC+GGG 0.493902 1_3:-35994092 Msa0116770:CDS
GAAATGCTACTCTCTGGAAC+AGG 0.494243 1_3:+35985725 None:intergenic
ACAATCTCTGACCCACTCCC+TGG 0.495299 1_3:+36000704 None:intergenic
GCTTATTGATTACCTTTCCT+CGG 0.496574 1_3:-35979391 Msa0116770:three_prime_UTR
CCACATTTGCTTGAAGAAGG+TGG 0.503052 1_3:-35993651 Msa0116770:CDS
TGAACTTTCTAAGTCACTGT+TGG 0.508367 1_3:-35994152 Msa0116770:CDS
ATCATCTTCTCTGAGATCTC+AGG 0.508929 1_3:-36002824 Msa0116770:intron
CAACAAAGAAAGTTACTCCT+AGG 0.511920 1_3:-35985865 Msa0116770:CDS
ACAGCAGCAGCTAGCAGCAA+AGG 0.513843 1_3:-35990856 Msa0116770:CDS
CTCTGGAACAGGACTGTCAC+TGG 0.517307 1_3:+35985736 None:intergenic
AGCTACAGAAGCCAAGGAAG+TGG 0.518580 1_3:-35979926 Msa0116770:CDS
GCATGCTTTAAAGCAACTCC+TGG 0.520162 1_3:+35989103 None:intergenic
TGCTAGCTGCTGCTGTTCGA+TGG 0.520737 1_3:+35990863 None:intergenic
TATATATCGAGAGAAGAGAA+AGG 0.522258 1_3:-36002905 Msa0116770:five_prime_UTR
GGAATCTGAACAAGAATATG+TGG 0.523447 1_3:-35979866 Msa0116770:CDS
GATCCTGCATTCCAGGGAGT+GGG 0.523800 1_3:-36000715 Msa0116770:five_prime_UTR
GATTGGAAAGGATACGAGTC+AGG 0.524304 1_3:-35999530 Msa0116770:intron
GAGCACGAGCGAAAAGTGTA+AGG 0.526551 1_3:+35978899 None:intergenic
CTTTGGGATTGGCCATGCTG+TGG 0.526752 1_3:-35987960 Msa0116770:CDS
AGCAGCTTGCCAAGCTGCTG+AGG 0.527450 1_3:-35994047 Msa0116770:intron
AATCAAACGGGTCAAGTGGA+GGG 0.527463 1_3:-35986433 Msa0116770:CDS
ATTGCTGAAGCAACAAGGGA+TGG 0.527655 1_3:-35993718 Msa0116770:CDS
GACATTGGTAAATTTCATAG+TGG 0.533163 1_3:-35993489 Msa0116770:CDS
GTTGCGCTTATCCGAATCAC+TGG 0.533849 1_3:-35991105 Msa0116770:CDS
TGATGAAGCTACAGAAGCCA+AGG 0.540644 1_3:-35979932 Msa0116770:CDS
GTATTTATCTGGTTTGGCCG+GGG 0.542559 1_3:-35994091 Msa0116770:CDS
AAAATGAGAAAATGCATAGT+GGG 0.543284 1_3:-35978642 Msa0116770:three_prime_UTR
CCAAACAATGGCTATTCGGT+TGG 0.546724 1_3:-35991465 Msa0116770:CDS
AAAGCAAAGACCAATTTGAC+TGG 0.547790 1_3:-35978608 Msa0116770:three_prime_UTR
GTGGAATTTCCTCATTTACA+GGG 0.548345 1_3:+35993670 None:intergenic
GCTTTCTGGCTTGCATTAGG+AGG 0.549101 1_3:-35989058 Msa0116770:CDS
AGCTATGTCTAACACTCTGA+AGG 0.551889 1_3:-36000743 Msa0116770:five_prime_UTR
TTAGCAGCCTTACCTTGGGT+CGG 0.552163 1_3:+35979226 None:intergenic
GCATGTGGTTTCTGTATGCA+TGG 0.556257 1_3:+35978545 None:intergenic
AATGTCCTCGTTCAGTAATG+AGG 0.556695 1_3:+35993506 None:intergenic
TTAAAGGCATGGAGAATCGA+TGG 0.560512 1_3:-35993540 Msa0116770:intron
TGAATGTCCTCTGACTACTT+TGG 0.561085 1_3:+35979827 None:intergenic
GAACAAGAATATGTGGAGGA+TGG 0.562270 1_3:-35979859 Msa0116770:CDS
ATCACAGCCGACCCAAGGTA+AGG 0.562716 1_3:-35979233 Msa0116770:three_prime_UTR
AAATCAAACGGGTCAAGTGG+AGG 0.563964 1_3:-35986434 Msa0116770:CDS
GATATGGCTGCATCTTTGGA+AGG 0.564349 1_3:-35988461 Msa0116770:CDS
AGATTGAATGGCTTAAACCA+TGG 0.565932 1_3:-35985950 Msa0116770:CDS
ATATATCGAGAGAAGAGAAA+GGG 0.566335 1_3:-36002904 Msa0116770:five_prime_UTR
TCTCCTGATTCCGATAGCAA+TGG 0.567747 1_3:-35979895 Msa0116770:CDS
TCATTCTTGCAGACAACACA+AGG 0.569746 1_3:-35999589 Msa0116770:intron
CCCTTATATAAAGTAACAGA+AGG 0.571998 1_3:-35988422 Msa0116770:CDS
TTGCTGAAGCAACAAGGGAT+GGG 0.572766 1_3:-35993717 Msa0116770:CDS
ATGTTGGTAGGCCTAAAGCA+AGG 0.573624 1_3:+35979200 None:intergenic
TGAATATGGGAAATTCTACA+TGG 0.573954 1_3:-36000285 Msa0116770:exon
AGGTCTACCCTTCAAAGAGT+TGG 0.578067 1_3:+35991430 None:intergenic
TTTACACTTCTGGATTGGAA+AGG 0.578647 1_3:-35999542 Msa0116770:CDS
TGGAAAAGAGCAACAAATTG+TGG 0.579410 1_3:+35991303 None:intergenic
AATTACTTACCTCAGCAGCT+TGG 0.580904 1_3:+35994038 None:intergenic
TTTGCTGGACTGTGGTGCTG+AGG 0.582145 1_3:-35994113 Msa0116770:CDS
GATACCTTAAGAACTACCAT+GGG 0.583114 1_3:+35991279 None:intergenic
ATTTCAAGATTACCGAGGAA+AGG 0.583369 1_3:+35979379 None:intergenic
TGGGATTGGCCATGCTGTGG+AGG 0.583414 1_3:-35987957 Msa0116770:intron
CAAAATCTACAAGGATAACA+AGG 0.586613 1_3:-35993923 Msa0116770:CDS
ACAGGACTGTCACTGGCCAC+AGG 0.587561 1_3:+35985743 None:intergenic
GAATATGGGAAATTCTACAT+GGG 0.592263 1_3:-36000284 Msa0116770:exon
TGTTGGTAGGCCTAAAGCAA+GGG 0.593197 1_3:+35979201 None:intergenic
CTGTTGCCGAGGATGGAAAA+GGG 0.593753 1_3:-35993830 Msa0116770:CDS
TTTCTGTATGCATGGTGTGG+TGG 0.594317 1_3:+35978553 None:intergenic
ACAATGTCCAACTCTTTGAA+GGG 0.595490 1_3:-35991437 Msa0116770:CDS
GATTGATCTTAAACGGAGAG+AGG 0.596333 1_3:-35979761 Msa0116770:intron
TCAGCATTGCTGAAGCAACA+AGG 0.597851 1_3:-35993723 Msa0116770:intron
ATCTGCTAGTACTGTTGCCG+AGG 0.598457 1_3:-35993841 Msa0116770:CDS
CAGCAAGAAAGTTACTAATG+AGG 0.598828 1_3:-35989020 Msa0116770:intron
GTTTGGCAAAGATAGTATTG+AGG 0.600429 1_3:-35993397 Msa0116770:intron
GGGGAACACAAGTGGAAGAA+CGG 0.601722 1_3:-35994072 Msa0116770:CDS
GTGGTGGTTAATTCGTGTGG+TGG 0.603746 1_3:+35978569 None:intergenic
TTGGGATTATACAAGAGCTA+AGG 0.603992 1_3:-35988360 Msa0116770:intron
GTTTGGCCGGGGAACACAAG+TGG 0.606040 1_3:-35994080 Msa0116770:CDS
AGGCCATCTGTAAAAGGTCA+AGG 0.608414 1_3:-35985845 Msa0116770:CDS
TGATACCTTAAGAACTACCA+TGG 0.613034 1_3:+35991278 None:intergenic
CAGCATTGCTGAAGCAACAA+GGG 0.619123 1_3:-35993722 Msa0116770:CDS
CGTCAGTTCTTACTGCTGAG+AGG 0.621045 1_3:-35985790 Msa0116770:CDS
TCATTACTGAACGAGGACAT+TGG 0.621733 1_3:-35993504 Msa0116770:CDS
TGAAGACACTAGAAACTGGA+CGG 0.624728 1_3:-35979040 Msa0116770:three_prime_UTR
CCTGATTCCGATAGCAATGG+GGG 0.624831 1_3:-35979892 Msa0116770:CDS
GAAGACACTAGAAACTGGAC+GGG 0.627885 1_3:-35979039 Msa0116770:three_prime_UTR
AAAATAGGCCAAAATCTACA+AGG 0.630318 1_3:-35993932 Msa0116770:CDS
TTTACATCACAGCCGACCCA+AGG 0.630377 1_3:-35979238 Msa0116770:three_prime_UTR
ATATGAACAGTGATGCTGCA+TGG 0.634125 1_3:-35979308 Msa0116770:three_prime_UTR
CGATTGCAAGACAAAACAGT+CGG 0.634136 1_3:+35990923 None:intergenic
ACTGTCACTGGCCACAGGAG+AGG 0.635142 1_3:+35985748 None:intergenic
TCCTGATTCCGATAGCAATG+GGG 0.635451 1_3:-35979893 Msa0116770:CDS
TGGAATTTCCTCATTTACAG+GGG 0.635535 1_3:+35993671 None:intergenic
CCTTAAGAACTACCATGGGG+TGG 0.638246 1_3:+35991283 None:intergenic
AATATGGGAAATTCTACATG+GGG 0.640019 1_3:-36000283 Msa0116770:CDS
TGATGGTGAAGTCAAGTCTG+AGG 0.640418 1_3:-35994179 Msa0116770:CDS
TCGGAAGAATTCAATGACGT+TGG 0.640558 1_3:+35990942 None:intergenic
TGGAGGACCAAGACAAAGAG+CGG 0.641857 1_3:-35985930 Msa0116770:CDS
AGGATAACAAGGATTACTCA+AGG 0.649299 1_3:-35993912 Msa0116770:CDS
TGGTTTCTGTATGCATGGTG+TGG 0.649782 1_3:+35978550 None:intergenic
CAAGACCTCATTACTGAACG+AGG 0.652924 1_3:-35993511 Msa0116770:CDS
AAAGGTCGCAGAATTTCTAA+GGG 0.652959 1_3:-35990838 Msa0116770:intron
ACAGTACTAGCAGATCCTGA+TGG 0.655612 1_3:+35993849 None:intergenic
ACACATACCATTCTGGTGAG+AGG 0.657275 1_3:-35993446 Msa0116770:CDS
CGCTAGTTAAACTAGCGCAG+TGG 0.657843 1_3:+35978857 None:intergenic
CAAACGGGTCAAGTGGAGGG+GGG 0.658548 1_3:-35986430 Msa0116770:CDS
TGAAGAAGGTGGAAAGATGG+AGG 0.664168 1_3:-35993640 Msa0116770:intron
CACGAGCGAAAAGTGTAAGG+CGG 0.664507 1_3:+35978902 None:intergenic
TTGCAGACAACACAAGGCAA+AGG 0.667009 1_3:-35999583 Msa0116770:intron
GGTGTGGTGGTTAATTCGTG+TGG 0.667283 1_3:+35978566 None:intergenic
AGTGATTCGGATAAGCGCAA+CGG 0.669525 1_3:+35991107 None:intergenic
ATCACCTGATACCTCTCCTG+TGG 0.671050 1_3:-35985759 Msa0116770:CDS
TTTCAGGGTCGCATATACGA+GGG 0.671555 1_3:-35991336 Msa0116770:intron
AGGACTGTACCTCCACAGCA+TGG 0.675625 1_3:+35987948 None:intergenic
ATAATGACCAAAGTAGTCAG+AGG 0.681044 1_3:-35979834 Msa0116770:CDS
AAATGCTATTTGCTGGACTG+TGG 0.682554 1_3:-35994121 Msa0116770:CDS
GGTGAAGTCAAGTCTGAGGA+AGG 0.683883 1_3:-35994175 Msa0116770:CDS
CCTTATATAAAGTAACAGAA+GGG 0.690283 1_3:-35988421 Msa0116770:CDS
AGTGCATTTCAAGATTACCG+AGG 0.698250 1_3:+35979374 None:intergenic
TGTTGATGAAGAACTAAATG+CGG 0.703179 1_3:+35985886 None:intergenic
ATCTGAACAAGAATATGTGG+AGG 0.712418 1_3:-35979863 Msa0116770:CDS
TTGAATGGCTTAAACCATGG+AGG 0.721883 1_3:-35985947 Msa0116770:CDS
ATATGGGAAATTCTACATGG+GGG 0.758962 1_3:-36000282 Msa0116770:CDS
ATACCTTAAGAACTACCATG+GGG 0.782667 1_3:+35991280 None:intergenic
ACTGTTCATATGAATCCACG+CGG 0.800117 1_3:+35979320 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTCTGAATTAATAAA+AGG - chr1_3:35979519-35979538 Msa0116770:CDS 10.0%
!!! AATTTTCTGAATTAATAAAA+GGG - chr1_3:35979520-35979539 Msa0116770:CDS 10.0%
!! TATATTAATTCAGAAAATTA+GGG + chr1_3:35979661-35979680 None:intergenic 10.0%
!! ATATATTAATTCAGAAAATT+AGG + chr1_3:35979662-35979681 None:intergenic 10.0%
!!! ATAGAAAATATTTTATGTTT+TGG - chr1_3:35980615-35980634 Msa0116770:intron 10.0%
!!! TAGAAAATATTTTATGTTTT+GGG - chr1_3:35980616-35980635 Msa0116770:intron 10.0%
!!! ACCTTATTTTATAAAAATTT+TGG - chr1_3:35981988-35982007 Msa0116770:intron 10.0%
!!! ACCAAAATTTTTATAAAATA+AGG + chr1_3:35981992-35982011 None:intergenic 10.0%
!! AAATCCTAATATTTATTAAT+AGG - chr1_3:35986124-35986143 Msa0116770:intron 10.0%
!! TAATCCTATTAATAAATATT+AGG + chr1_3:35986131-35986150 None:intergenic 10.0%
!!! GAATTTTAATATTTATTGTT+AGG - chr1_3:35987209-35987228 Msa0116770:intron 10.0%
!! GTATATAATTTAACAATTAA+AGG - chr1_3:35988047-35988066 Msa0116770:intron 10.0%
!!! TTTAAAGAATTTAAAATTCT+AGG + chr1_3:35988838-35988857 None:intergenic 10.0%
!! TAAATTTAGGAATAATTAAA+TGG + chr1_3:35989832-35989851 None:intergenic 10.0%
!!! GGTAAAAATATTTTAAATTT+AGG + chr1_3:35989845-35989864 None:intergenic 10.0%
!!! TATTTTTACCAAAAATAATT+TGG - chr1_3:35989855-35989874 Msa0116770:intron 10.0%
!!! ATTTTTACCAAAAATAATTT+GGG - chr1_3:35989856-35989875 Msa0116770:intron 10.0%
!!! AGTAGAATAATTTTTTTTTA+TGG - chr1_3:35990056-35990075 Msa0116770:intron 10.0%
!! AAATAAGAATAACATAATTA+TGG + chr1_3:35990636-35990655 None:intergenic 10.0%
!!! TAATTATGTTATTCTTATTT+AGG - chr1_3:35990636-35990655 Msa0116770:intron 10.0%
!! AAAAGAATAAACAAAAAAAA+TGG + chr1_3:35992742-35992761 None:intergenic 10.0%
!!! AAAACTTTAGAATATTATAA+AGG + chr1_3:35994926-35994945 None:intergenic 10.0%
!!! TTTTTTTCATTTTGTTTTTT+TGG - chr1_3:35995566-35995585 Msa0116770:intron 10.0%
!!! ATTAGATTTTATAAACAAAA+AGG - chr1_3:36002439-36002458 Msa0116770:intron 10.0%
!!! AAAGTAAATTTTTATATATG+GGG + chr1_3:36002487-36002506 None:intergenic 10.0%
!! AATATTTGAATGAAAGAAAA+CGG - chr1_3:35979043-35979062 Msa0116770:three_prime_UTR 15.0%
!!! GTTTATTTCTGTTTAATATA+TGG - chr1_3:35979739-35979758 Msa0116770:intron 15.0%
!! CATATTATATTAAAACAACA+TGG - chr1_3:35979796-35979815 Msa0116770:CDS 15.0%
!!! ATGATTTAAGTTATCAAATT+AGG + chr1_3:35980675-35980694 None:intergenic 15.0%
!! AATTTGTATTTCTTAAGAAA+TGG - chr1_3:35980795-35980814 Msa0116770:intron 15.0%
!!! GTTGAAATTTAACTTTTATT+TGG - chr1_3:35981051-35981070 Msa0116770:intron 15.0%
!!! TTAACTTTTATTTGGATTAA+TGG - chr1_3:35981059-35981078 Msa0116770:intron 15.0%
!!! TAACTTTTATTTGGATTAAT+GGG - chr1_3:35981060-35981079 Msa0116770:intron 15.0%
!! TGATTTCAATTTATAATTCT+GGG - chr1_3:35981850-35981869 Msa0116770:intron 15.0%
!! ATTTATATTCTTACAAAAGA+GGG + chr1_3:35981916-35981935 None:intergenic 15.0%
!! TATTTATATTCTTACAAAAG+AGG + chr1_3:35981917-35981936 None:intergenic 15.0%
!!! TGTAATTTAAAATTATGCTT+TGG - chr1_3:35982575-35982594 Msa0116770:intron 15.0%
!! AATAAGATTTATCAATTCAA+TGG - chr1_3:35982658-35982677 Msa0116770:intron 15.0%
!! GATAATAAGATATAAATAAG+TGG + chr1_3:35984228-35984247 None:intergenic 15.0%
!! ATACAAATGATATAAAGAAA+GGG + chr1_3:35984510-35984529 None:intergenic 15.0%
!!! TCTTTTTACAATATGTAATT+TGG - chr1_3:35984535-35984554 Msa0116770:intron 15.0%
!!! TAATATTCTTTCTATTTTAC+TGG - chr1_3:35984980-35984999 Msa0116770:intron 15.0%
!! ATAACCTGAAATATATTATT+GGG - chr1_3:35985340-35985359 Msa0116770:intron 15.0%
!! TGAATATATATCATTACATT+TGG + chr1_3:35985933-35985952 None:intergenic 15.0%
!! ATAGATATTATTATGAATAG+TGG - chr1_3:35986246-35986265 Msa0116770:intron 15.0%
!! GATTATTTAATAAATAGTCT+TGG - chr1_3:35989465-35989484 Msa0116770:intron 15.0%
!! AATACTAACATCTATTTATA+GGG + chr1_3:35989583-35989602 None:intergenic 15.0%
!! AAATACTAACATCTATTTAT+AGG + chr1_3:35989584-35989603 None:intergenic 15.0%
!! TTTCTATTCATATTTCTTTA+TGG - chr1_3:35990033-35990052 Msa0116770:intron 15.0%
!! ATCAAAAATGAATAATTTCA+TGG + chr1_3:35990571-35990590 None:intergenic 15.0%
!!! TTATTTTATGTACTTTTATG+AGG - chr1_3:35991022-35991041 Msa0116770:intron 15.0%
!! ATAACCTTTATAAAATGATA+AGG + chr1_3:35992633-35992652 None:intergenic 15.0%
!!! TTTTTTATATTTTATTCTGC+AGG - chr1_3:35992889-35992908 Msa0116770:intron 15.0%
!!! ATTCTAAATGTTTTAAATGT+TGG - chr1_3:35993474-35993493 Msa0116770:CDS 15.0%
!!! TTTATTTTTCTTATTACTTC+AGG - chr1_3:35993583-35993602 Msa0116770:intron 15.0%
!! ATTCTAACAAAAAAAATGAA+TGG + chr1_3:35993868-35993887 None:intergenic 15.0%
!!! ATATCTTTAGAATATGTTTT+TGG + chr1_3:35994453-35994472 None:intergenic 15.0%
!!! AAATAAAGGTGTTATATTAA+AGG + chr1_3:35994567-35994586 None:intergenic 15.0%
!!! TTTATTTAGCTTTGAATTTT+AGG - chr1_3:35994741-35994760 Msa0116770:intron 15.0%
!!! CATTTTTGTATATATTTGAA+GGG + chr1_3:35994869-35994888 None:intergenic 15.0%
!! ATTAATCTTCCTTATTAATT+AGG - chr1_3:35996035-35996054 Msa0116770:intron 15.0%
!! TTAATCTTCCTTATTAATTA+GGG - chr1_3:35996036-35996055 Msa0116770:intron 15.0%
!! GTTTATTATATCATATTATG+TGG + chr1_3:35996103-35996122 None:intergenic 15.0%
!! ATTAATCTTCCTTATTAATT+AGG - chr1_3:35996035-35996054 Msa0116770:intron 15.0%
!! TTAATCTTCCTTATTAATTA+GGG - chr1_3:35996036-35996055 Msa0116770:intron 15.0%
!! GTTTATTATATCATATTATG+TGG + chr1_3:35996103-35996122 None:intergenic 15.0%
!! CAATTGTTTAATTATTTCAA+TGG - chr1_3:36001331-36001350 Msa0116770:intron 15.0%
!! AAAAAGATTTAATAAAGTCA+GGG + chr1_3:36001920-36001939 None:intergenic 15.0%
!! TAAAAAGATTTAATAAAGTC+AGG + chr1_3:36001921-36001940 None:intergenic 15.0%
!! AAAAATAATTTAATGTTGGT+AGG + chr1_3:36002418-36002437 None:intergenic 15.0%
!!! TTTTTTATGCTTTTGCTTTT+TGG - chr1_3:35978921-35978940 Msa0116770:three_prime_UTR 20.0%
!! TTATTGTAGATTCATACATT+TGG - chr1_3:35979066-35979085 Msa0116770:three_prime_UTR 20.0%
!! TTGAATATGATTAGTACATA+AGG - chr1_3:35979367-35979386 Msa0116770:three_prime_UTR 20.0%
!! TGAATATGATTAGTACATAA+GGG - chr1_3:35979368-35979387 Msa0116770:three_prime_UTR 20.0%
!!! TGGTTTTTAGAAAAAGAAAA+TGG - chr1_3:35979415-35979434 Msa0116770:three_prime_UTR 20.0%
!!! TTTTAGAAAAAGAAAATGGA+AGG - chr1_3:35979419-35979438 Msa0116770:three_prime_UTR 20.0%
!! TAAAACTAGAAAAAGTCAAA+AGG + chr1_3:35979695-35979714 None:intergenic 20.0%
!! TCAATTTGATGAAAATTTCT+TGG - chr1_3:35980226-35980245 Msa0116770:intron 20.0%
!!! TTTACTCCTGTTTTAATATA+TGG - chr1_3:35980348-35980367 Msa0116770:intron 20.0%
!! TTTGGAAAATGAATTGATAA+AGG + chr1_3:35980405-35980424 None:intergenic 20.0%
!!! CATTTTCCAAATTCATAAAT+AGG - chr1_3:35980414-35980433 Msa0116770:intron 20.0%
!! ATATGACCTATTTATGAATT+TGG + chr1_3:35980423-35980442 None:intergenic 20.0%
!! TATCTATCATTATCATGTTA+AGG + chr1_3:35980596-35980615 None:intergenic 20.0%
!! ATTGCATGATATTACATTAT+TGG - chr1_3:35980705-35980724 Msa0116770:intron 20.0%
!!! TATTTCTTAAGAAATGGATT+TGG - chr1_3:35980801-35980820 Msa0116770:intron 20.0%
!! TACATAATGACATTACTTAA+AGG + chr1_3:35980927-35980946 None:intergenic 20.0%
!! GTTAAATTTCAACAAAAGTA+AGG + chr1_3:35981044-35981063 None:intergenic 20.0%
!!! TATAAGAACATTTAAAGTCT+AGG + chr1_3:35981406-35981425 None:intergenic 20.0%
!!! TTGAAATCAGTCAAATATTT+TGG + chr1_3:35981839-35981858 None:intergenic 20.0%
!! CTGATTTCAATTTATAATTC+TGG - chr1_3:35981849-35981868 Msa0116770:intron 20.0%
!! GATTTCAATTTATAATTCTG+GGG - chr1_3:35981851-35981870 Msa0116770:intron 20.0%
!! ATTTCAATTTATAATTCTGG+GGG - chr1_3:35981852-35981871 Msa0116770:intron 20.0%
!!! ACATATTCATTCTGAAAATA+AGG + chr1_3:35981963-35981982 None:intergenic 20.0%
!!! ATTTTTATGATTTACACTTC+TGG - chr1_3:35982051-35982070 Msa0116770:intron 20.0%
!!! AAAACCCTTTGAAAATAAAA+AGG + chr1_3:35982188-35982207 None:intergenic 20.0%
!!! TTTATTTTCAAAGGGTTTTA+TGG - chr1_3:35982189-35982208 Msa0116770:intron 20.0%
!! GAATTGATAAATCTTATTGT+GGG + chr1_3:35982656-35982675 None:intergenic 20.0%
!! TGAATTGATAAATCTTATTG+TGG + chr1_3:35982657-35982676 None:intergenic 20.0%
!!! TTTCAAGAAGGAATTTTTAT+CGG - chr1_3:35984026-35984045 Msa0116770:intron 20.0%
!! GTAGAAAATAAGATTATTGA+GGG + chr1_3:35984178-35984197 None:intergenic 20.0%
!! AGTAGAAAATAAGATTATTG+AGG + chr1_3:35984179-35984198 None:intergenic 20.0%
!! TTAAAAGTAAGACAATTCTA+GGG + chr1_3:35984285-35984304 None:intergenic 20.0%
!! ATTAAAAGTAAGACAATTCT+AGG + chr1_3:35984286-35984305 None:intergenic 20.0%
!!! AGATACAATCAACTTTTATT+AGG - chr1_3:35984309-35984328 Msa0116770:intron 20.0%
!! AGATAGTTCAATTATTAAAG+AGG - chr1_3:35984386-35984405 Msa0116770:intron 20.0%
!! CATACAAATGATATAAAGAA+AGG + chr1_3:35984511-35984530 None:intergenic 20.0%
!! TTGAACATATAGTTATAAGT+GGG - chr1_3:35984759-35984778 Msa0116770:intron 20.0%
!! TATCACATTCTTAGAATTTA+AGG + chr1_3:35984833-35984852 None:intergenic 20.0%
!!! ATGAGGAGATTTTATAATTA+TGG - chr1_3:35984852-35984871 Msa0116770:intron 20.0%
!!! TGAGGAGATTTTATAATTAT+GGG - chr1_3:35984853-35984872 Msa0116770:intron 20.0%
!! ATAGAAAGAATATTAGAATG+CGG + chr1_3:35984975-35984994 None:intergenic 20.0%
!!! AGTTTACGTTTCATAATTTT+TGG - chr1_3:35985026-35985045 Msa0116770:intron 20.0%
!! CATAACCTGAAATATATTAT+TGG - chr1_3:35985339-35985358 Msa0116770:intron 20.0%
!!! AAGTTGTTGTAATTTGTATT+CGG - chr1_3:35985988-35986007 Msa0116770:intron 20.0%
!!! TTTTTTAGAGGTCTATATTA+GGG - chr1_3:35986191-35986210 Msa0116770:intron 20.0%
!! GTTAGAAAATCATATCAATT+AGG - chr1_3:35987238-35987257 Msa0116770:intron 20.0%
!! TTAACTAATATAATATCTCC+AGG - chr1_3:35987633-35987652 Msa0116770:intron 20.0%
!! GTTTATGACGTAAATTATAA+AGG + chr1_3:35987991-35988010 None:intergenic 20.0%
!! GTGACAATTTAGTTAAAAAT+GGG + chr1_3:35988017-35988036 None:intergenic 20.0%
!! TAAATTATATACATGTTCAC+TGG + chr1_3:35988039-35988058 None:intergenic 20.0%
!! TAATTTAACAATTAAAGGCA+TGG - chr1_3:35988052-35988071 Msa0116770:intron 20.0%
!!! AGTATTTTAGTTTATCTTCT+AGG + chr1_3:35988356-35988375 None:intergenic 20.0%
!! ATCAATGTATCTCTATAAAT+CGG - chr1_3:35988413-35988432 Msa0116770:CDS 20.0%
!! TAAGATTATAAACTAATCCT+AGG + chr1_3:35988675-35988694 None:intergenic 20.0%
!! AATGTAATGTAATGTTATGA+GGG - chr1_3:35988787-35988806 Msa0116770:intron 20.0%
!! GAGTTTCTTGAATATATATT+AGG - chr1_3:35988891-35988910 Msa0116770:intron 20.0%
!!! GACTTCTTTTTACTAATTTT+AGG - chr1_3:35989540-35989559 Msa0116770:intron 20.0%
!!! TCTTTTTACTAATTTTAGGA+TGG - chr1_3:35989544-35989563 Msa0116770:intron 20.0%
!! GAAGTTGAGTTTATAATAAA+AGG + chr1_3:35989668-35989687 None:intergenic 20.0%
!!! GAAATTACCCAAATTATTTT+TGG + chr1_3:35989866-35989885 None:intergenic 20.0%
!!! ATCATAAATCGCATTTTAAA+AGG + chr1_3:35989921-35989940 None:intergenic 20.0%
!!! TTTTTTTAATTGTTTCTCAG+TGG - chr1_3:35989989-35990008 Msa0116770:intron 20.0%
!! TAAGAATAACATAATTATGG+TGG + chr1_3:35990633-35990652 None:intergenic 20.0%
!! AGTTTGAATTAGTAAAATTG+AGG + chr1_3:35990870-35990889 None:intergenic 20.0%
!! AATTTCAATCTATAAGAACA+AGG - chr1_3:35991083-35991102 Msa0116770:CDS 20.0%
!! ATTTCAATCTATAAGAACAA+GGG - chr1_3:35991084-35991103 Msa0116770:CDS 20.0%
!!! TAGAAAAGTTGATAGAAAAT+AGG - chr1_3:35992006-35992025 Msa0116770:intron 20.0%
!! TGTTAAAAAAATATACTCAG+AGG + chr1_3:35992416-35992435 None:intergenic 20.0%
!!! TTCACCTTATCATTTTATAA+AGG - chr1_3:35992626-35992645 Msa0116770:intron 20.0%
!!! TTTAATTTGTTGACTTTACA+TGG - chr1_3:35993560-35993579 Msa0116770:intron 20.0%
!!! TTTTCCCAAAAATAAAAATC+AGG + chr1_3:35993678-35993697 None:intergenic 20.0%
!!! AGATCTCAAAATATAAGTTT+TGG + chr1_3:35993963-35993982 None:intergenic 20.0%
!! ATCTGAAAACATCAAAATTA+GGG - chr1_3:35994203-35994222 Msa0116770:intron 20.0%
!! AAAGCTAAATAAACAGAAAA+AGG + chr1_3:35994734-35994753 None:intergenic 20.0%
!!! GCATTTTTGTATATATTTGA+AGG + chr1_3:35994870-35994889 None:intergenic 20.0%
!! TCGAGAAAGAAAATAAATAT+TGG + chr1_3:35995007-35995026 None:intergenic 20.0%
!! TTTAAGAATATTATTGTTGC+TGG - chr1_3:35995369-35995388 Msa0116770:intron 20.0%
!! ATAATTAATCAAGTACTTAG+TGG - chr1_3:35995950-35995969 Msa0116770:intron 20.0%
!! TAATCTTCCTTATTAATTAG+GGG - chr1_3:35996037-35996056 Msa0116770:intron 20.0%
!!! ACATATTTTCAGTTCTAATA+TGG - chr1_3:35996121-35996140 Msa0116770:intron 20.0%
!! TTCAATTTAAAAGTAGTTTG+AGG + chr1_3:35997493-35997512 None:intergenic 20.0%
!!! TACAAAGTTTGATAATACTT+TGG + chr1_3:35997948-35997967 None:intergenic 20.0%
!! TATAAATTCCTTAAAAGCTT+TGG - chr1_3:35998563-35998582 Msa0116770:intron 20.0%
!!! TAAGTTTGATTTTCATTCAA+AGG - chr1_3:35998625-35998644 Msa0116770:intron 20.0%
!! ATTTAAACAAGTCAAGATAA+GGG + chr1_3:35998757-35998776 None:intergenic 20.0%
!! AGTACAAAATTGTCTAAATT+TGG - chr1_3:36000019-36000038 Msa0116770:intron 20.0%
!! ATAATTAATCAAGTACTTAG+TGG - chr1_3:35995950-35995969 Msa0116770:intron 20.0%
!! TAATCTTCCTTATTAATTAG+GGG - chr1_3:35996037-35996056 Msa0116770:intron 20.0%
!!! TTTTTGCAACAAATAGAATA+TGG + chr1_3:36000976-36000995 None:intergenic 20.0%
!! GTAATAATCGAATAAACTAT+AGG - chr1_3:36001488-36001507 Msa0116770:intron 20.0%
!! AAAAGATTTAATAAAGTCAG+GGG + chr1_3:36001919-36001938 None:intergenic 20.0%
!!! ATTAAATCTTTTTAACTCTG+TGG - chr1_3:36001927-36001946 Msa0116770:intron 20.0%
!!! TTAAATCTTTTTAACTCTGT+GGG - chr1_3:36001928-36001947 Msa0116770:intron 20.0%
!!! AAGTTTGTATTTTAAATACG+TGG - chr1_3:36002605-36002624 Msa0116770:intron 20.0%
!! TTTCATTCAAATATTTTGCG+CGG + chr1_3:35979038-35979057 None:intergenic 25.0%
! GTATCTTTCATTATAAGGTA+TGG + chr1_3:35979290-35979309 None:intergenic 25.0%
! CCAATGTATCTTTCATTATA+AGG + chr1_3:35979295-35979314 None:intergenic 25.0%
! CCTTATAATGAAAGATACAT+TGG - chr1_3:35979292-35979311 Msa0116770:three_prime_UTR 25.0%
! GATTGAAAAACTTTGTTAGT+TGG - chr1_3:35979314-35979333 Msa0116770:three_prime_UTR 25.0%
!!! ATTCATGTCTTATTTGAAGT+TGG - chr1_3:35979454-35979473 Msa0116770:CDS 25.0%
!!! ATTAGTTTTTCTGACATGAT+AGG + chr1_3:35979503-35979522 None:intergenic 25.0%
! TAATTCAGAAAATTAGGGTA+AGG + chr1_3:35979656-35979675 None:intergenic 25.0%
!!! GGATTTTGAAAGTATATCAT+GGG + chr1_3:35979857-35979876 None:intergenic 25.0%
!!! TGGATTTTGAAAGTATATCA+TGG + chr1_3:35979858-35979877 None:intergenic 25.0%
!!! AGATCTTTTAGGAGATAATT+TGG + chr1_3:35980066-35980085 None:intergenic 25.0%
! TAAATAGGTGACACAAAATT+TGG + chr1_3:35980157-35980176 None:intergenic 25.0%
!! TTTGTGTCAAAAACTTTTAG+AGG - chr1_3:35980276-35980295 Msa0116770:intron 25.0%
!!! AAACTTTTAGAGGATTAATG+TGG - chr1_3:35980286-35980305 Msa0116770:intron 25.0%
! ATAAATAGGTCATATGTTTG+CGG - chr1_3:35980428-35980447 Msa0116770:intron 25.0%
!! AGTAGTTTGTATATTGTTCT+AGG + chr1_3:35980460-35980479 None:intergenic 25.0%
! TAGAACAATATACAAACTAC+TGG - chr1_3:35980459-35980478 Msa0116770:intron 25.0%
! AAATTTCAACAAAAGTAAGG+TGG + chr1_3:35981041-35981060 None:intergenic 25.0%
!! TTAGAGCATCTATGATTATT+TGG + chr1_3:35981105-35981124 None:intergenic 25.0%
! AATATGCTATATACTTTGAG+AGG - chr1_3:35981219-35981238 Msa0116770:intron 25.0%
!!! TTAAACTTAACTTGTTGTAG+AGG - chr1_3:35981244-35981263 Msa0116770:intron 25.0%
! AATTTCCCATATTCAGATTT+GGG + chr1_3:35981313-35981332 None:intergenic 25.0%
! TTCATATAGTCTATTCACTA+TGG - chr1_3:35981812-35981831 Msa0116770:intron 25.0%
! TTTCAAGCATATGATTACAA+GGG + chr1_3:35982120-35982139 None:intergenic 25.0%
!!! TTTTCAAGCATATGATTACA+AGG + chr1_3:35982121-35982140 None:intergenic 25.0%
!!! TCCACCTTTTTATTTTCAAA+GGG - chr1_3:35982181-35982200 Msa0116770:intron 25.0%
!! TTTTATGGTTCCTTAATGAT+TGG - chr1_3:35982204-35982223 Msa0116770:intron 25.0%
!! ACTATTCTTTTTGCCAAAAA+GGG + chr1_3:35982246-35982265 None:intergenic 25.0%
! ATGTATTATACCATTAGAGA+GGG - chr1_3:35982417-35982436 Msa0116770:intron 25.0%
!! ATTTAAAATTATGCTTTGGC+AGG - chr1_3:35982579-35982598 Msa0116770:intron 25.0%
!!! ATTTTGTTATCTTCTTTCAG+AGG - chr1_3:35982804-35982823 Msa0116770:intron 25.0%
! TGCTTGATGAAAAGTTATAT+TGG - chr1_3:35983076-35983095 Msa0116770:intron 25.0%
! GCTTGATGAAAAGTTATATT+GGG - chr1_3:35983077-35983096 Msa0116770:intron 25.0%
! CTTGATGAAAAGTTATATTG+GGG - chr1_3:35983078-35983097 Msa0116770:intron 25.0%
! ATTGCAGTACAAATATTGAT+GGG + chr1_3:35983232-35983251 None:intergenic 25.0%
! AAAAATGGAAACGAAAGAAA+AGG + chr1_3:35983297-35983316 None:intergenic 25.0%
! GAGAATTCAAGAACAAAAAA+TGG + chr1_3:35983312-35983331 None:intergenic 25.0%
!! TTGTTCTTGAATTCTCTTTT+TGG - chr1_3:35983316-35983335 Msa0116770:intron 25.0%
! TAGAACAAGATTATCTTGAA+GGG + chr1_3:35983461-35983480 None:intergenic 25.0%
! TGTTTGTGTATGAAACAATA+GGG + chr1_3:35983533-35983552 None:intergenic 25.0%
! TTGTTTGTGTATGAAACAAT+AGG + chr1_3:35983534-35983553 None:intergenic 25.0%
!! TACACAAACAAGATTTTGTA+AGG - chr1_3:35983543-35983562 Msa0116770:intron 25.0%
! ATGTGCTTGAATTATTAAGA+TGG + chr1_3:35983735-35983754 None:intergenic 25.0%
! TTTGGAAAACAACTTAGAAT+GGG + chr1_3:35984145-35984164 None:intergenic 25.0%
! ATAATTGAACTATCTTCCAT+CGG + chr1_3:35984381-35984400 None:intergenic 25.0%
!! TTGTGGTTTGAAATATACAT+TGG - chr1_3:35984577-35984596 Msa0116770:intron 25.0%
! CTTGAACATATAGTTATAAG+TGG - chr1_3:35984758-35984777 Msa0116770:intron 25.0%
! TGAACATATAGTTATAAGTG+GGG - chr1_3:35984760-35984779 Msa0116770:intron 25.0%
!! CATTCTTAGAATTTAAGGTT+AGG + chr1_3:35984828-35984847 None:intergenic 25.0%
!! AATTCTAAGAATGTGATATG+AGG - chr1_3:35984835-35984854 Msa0116770:intron 25.0%
! TATCTTTGCTAACATAGAAT+TGG - chr1_3:35984915-35984934 Msa0116770:intron 25.0%
! ATCTTTGCTAACATAGAATT+GGG - chr1_3:35984916-35984935 Msa0116770:intron 25.0%
! AACTACTAATGAGTTCATTT+AGG + chr1_3:35985010-35985029 None:intergenic 25.0%
!!! TACGTTTCATAATTTTTGGA+TGG - chr1_3:35985030-35985049 Msa0116770:intron 25.0%
!!! ACGTTTCATAATTTTTGGAT+GGG - chr1_3:35985031-35985050 Msa0116770:intron 25.0%
!! AGTTGTTGTAATTTGTATTC+GGG - chr1_3:35985989-35986008 Msa0116770:intron 25.0%
!! AATATAGACCTCTAAAAAAG+AGG + chr1_3:35986190-35986209 None:intergenic 25.0%
!!! CTTTTTTAGAGGTCTATATT+AGG - chr1_3:35986190-35986209 Msa0116770:intron 25.0%
!!! TTTTTAGAGGTCTATATTAG+GGG - chr1_3:35986192-35986211 Msa0116770:intron 25.0%
! TATAAGAAAGACTACTTGAT+GGG + chr1_3:35986220-35986239 None:intergenic 25.0%
! ATATAAGAAAGACTACTTGA+TGG + chr1_3:35986221-35986240 None:intergenic 25.0%
!! AAAACCTGATGAAAACTTTT+CGG + chr1_3:35986398-35986417 None:intergenic 25.0%
! GAAACATAACAGTTTCTAAA+TGG - chr1_3:35987333-35987352 Msa0116770:intron 25.0%
! TTAAGTCTAACTTTGATTCT+TGG - chr1_3:35987731-35987750 Msa0116770:intron 25.0%
! GGTGACAATTTAGTTAAAAA+TGG + chr1_3:35988018-35988037 None:intergenic 25.0%
! TGAATAATCTTAGAGTTTCT+AGG + chr1_3:35988313-35988332 None:intergenic 25.0%
! TCAATGTATCTCTATAAATC+GGG - chr1_3:35988414-35988433 Msa0116770:CDS 25.0%
! TAAAACTCATAACTTCAAGA+TGG - chr1_3:35988530-35988549 Msa0116770:intron 25.0%
! TATGATATTCTAGCAAATAG+TGG + chr1_3:35988601-35988620 None:intergenic 25.0%
! TTATAATCTTAGAGTGTGTT+TGG - chr1_3:35988684-35988703 Msa0116770:intron 25.0%
! GAATGTAATGTAATGTTATG+AGG - chr1_3:35988786-35988805 Msa0116770:intron 25.0%
! CATGATTTCCCTATTTATTT+AGG - chr1_3:35989010-35989029 Msa0116770:intron 25.0%
! CTCGTAATCCTAAATAAATA+GGG + chr1_3:35989021-35989040 None:intergenic 25.0%
! ACTCGTAATCCTAAATAAAT+AGG + chr1_3:35989022-35989041 None:intergenic 25.0%
! ATTGTGTGATTCAAAATAGT+AGG + chr1_3:35989071-35989090 None:intergenic 25.0%
!! AGTTACGGATTTTAGATAAA+AGG + chr1_3:35989134-35989153 None:intergenic 25.0%
! TAAATACTGTGTTGAAGTTA+CGG + chr1_3:35989149-35989168 None:intergenic 25.0%
!!! TTTTTCAATGATTGCTGTTT+TGG - chr1_3:35989372-35989391 Msa0116770:intron 25.0%
! GTTGAGTTTATAATAAAAGG+AGG + chr1_3:35989665-35989684 None:intergenic 25.0%
!!! TAACTATTGTTGTTGTTTTC+AGG - chr1_3:35990251-35990270 Msa0116770:intron 25.0%
!!! AACTATTGTTGTTGTTTTCA+GGG - chr1_3:35990252-35990271 Msa0116770:intron 25.0%
!! ATTAATAAGGATGCTCTTTT+CGG + chr1_3:35990905-35990924 None:intergenic 25.0%
! TTTCAATCTATAAGAACAAG+GGG - chr1_3:35991085-35991104 Msa0116770:CDS 25.0%
!!! ACACTTAGTTTTCATTGATT+TGG - chr1_3:35991314-35991333 Msa0116770:CDS 25.0%
!! TCTATCAACTTTTCTACTAT+AGG + chr1_3:35992002-35992021 None:intergenic 25.0%
! TATTAGAGAAACCATTAGAA+AGG - chr1_3:35992139-35992158 Msa0116770:intron 25.0%
!! TTGATATGACTATATCCTTT+TGG - chr1_3:35992335-35992354 Msa0116770:intron 25.0%
!!! ATAACATTTCCTCCTTTTTT+AGG - chr1_3:35992818-35992837 Msa0116770:intron 25.0%
! ACTGACAAAATTCCTAAAAA+AGG + chr1_3:35992833-35992852 None:intergenic 25.0%
!! TTTTGTCAGTAGAAACATTT+AGG - chr1_3:35992843-35992862 Msa0116770:intron 25.0%
! TTTGTCAGTAGAAACATTTA+GGG - chr1_3:35992844-35992863 Msa0116770:intron 25.0%
!!! AAGCATTTTGCTTTTCTTTA+GGG + chr1_3:35993018-35993037 None:intergenic 25.0%
!!! AAAGCATTTTGCTTTTCTTT+AGG + chr1_3:35993019-35993038 None:intergenic 25.0%
!!! AAGCAAAATGCTTTTGAAAT+TGG - chr1_3:35993025-35993044 Msa0116770:intron 25.0%
!! AGAATTGAATTTTACTTACC+TGG + chr1_3:35993051-35993070 None:intergenic 25.0%
!!! ATTTCTGAAGTAAAGTTTCA+AGG + chr1_3:35993117-35993136 None:intergenic 25.0%
! ACTTCAGAAATACATAGATA+TGG - chr1_3:35993126-35993145 Msa0116770:intron 25.0%
!!! CCTTCTGTTACTTTATATAA+GGG + chr1_3:35993184-35993203 None:intergenic 25.0%
! CCTTATATAAAGTAACAGAA+GGG - chr1_3:35993182-35993201 Msa0116770:intron 25.0%
! AAGTATGTAGTGAAAAAGAA+AGG + chr1_3:35993214-35993233 None:intergenic 25.0%
!! TTTTCACTACATACTTTTCA+TGG - chr1_3:35993218-35993237 Msa0116770:intron 25.0%
!! TTTCACTACATACTTTTCAT+GGG - chr1_3:35993219-35993238 Msa0116770:intron 25.0%
! TATGTCCAAAGGAATTAAAA+TGG - chr1_3:35993266-35993285 Msa0116770:intron 25.0%
!! AGAATTTTGTCATCACATAT+AGG - chr1_3:35993437-35993456 Msa0116770:CDS 25.0%
!!! ACAGTCCTGATTTTTATTTT+TGG - chr1_3:35993670-35993689 Msa0116770:CDS 25.0%
!!! CAGTCCTGATTTTTATTTTT+GGG - chr1_3:35993671-35993690 Msa0116770:CDS 25.0%
! AACTGAAATTCAGTTAGTTA+CGG + chr1_3:35994016-35994035 None:intergenic 25.0%
! GATCTGAAAACATCAAAATT+AGG - chr1_3:35994202-35994221 Msa0116770:intron 25.0%
! AATTCTCTCATGCAATAAAA+TGG - chr1_3:35994410-35994429 Msa0116770:intron 25.0%
! ATTCTCTCATGCAATAAAAT+GGG - chr1_3:35994411-35994430 Msa0116770:intron 25.0%
!! TTTGAAACAAAAGTTTGTGT+TGG + chr1_3:35994538-35994557 None:intergenic 25.0%
!! TATAACACCTTTATTTCTTC+AGG - chr1_3:35994571-35994590 Msa0116770:intron 25.0%
!! GATCATGTTTACTTCATTTT+TGG + chr1_3:35994608-35994627 None:intergenic 25.0%
! CTAAATAAACAGAAAAAGGA+AGG + chr1_3:35994730-35994749 None:intergenic 25.0%
! TTGACATTTAGAAATACTGT+TGG + chr1_3:35994980-35994999 None:intergenic 25.0%
! TTAAGAATACAGCACATAAT+AGG + chr1_3:35995528-35995547 None:intergenic 25.0%
! TAGTTAACCCCTAATTAATA+AGG + chr1_3:35996047-35996066 None:intergenic 25.0%
! TTATTAATTAGGGGTTAACT+AGG - chr1_3:35996046-35996065 Msa0116770:intron 25.0%
! GAATGTACATTTATATAGGT+AGG + chr1_3:35996077-35996096 None:intergenic 25.0%
! GTGAGAATGTACATTTATAT+AGG + chr1_3:35996081-35996100 None:intergenic 25.0%
!!! TAATTGTGGTTTTGAGAATT+AGG + chr1_3:35996908-35996927 None:intergenic 25.0%
! TAAAGGAGAAGTAAATTGTA+AGG + chr1_3:35997467-35997486 None:intergenic 25.0%
!!! ACAAGATTTTTGGTTATAGA+GGG + chr1_3:35997532-35997551 None:intergenic 25.0%
!!! AACAAGATTTTTGGTTATAG+AGG + chr1_3:35997533-35997552 None:intergenic 25.0%
!! AAATCTGACAAGCTTTTATT+TGG + chr1_3:35997982-35998001 None:intergenic 25.0%
!! AACTAATTTTCTGTGATCTT+TGG - chr1_3:35998079-35998098 Msa0116770:intron 25.0%
!! ACTAATTTTCTGTGATCTTT+GGG - chr1_3:35998080-35998099 Msa0116770:intron 25.0%
! ATTTAACTGCAATTCAATCA+TGG + chr1_3:35998238-35998257 None:intergenic 25.0%
!! CTATTGAGATATTTTGTGAA+AGG + chr1_3:35998306-35998325 None:intergenic 25.0%
! TGAAGGTTAAGTAAGAAAAA+GGG + chr1_3:35998533-35998552 None:intergenic 25.0%
! TTGAAGGTTAAGTAAGAAAA+AGG + chr1_3:35998534-35998553 None:intergenic 25.0%
! ATTTATAGTCTGGAAATTGA+AGG + chr1_3:35998550-35998569 None:intergenic 25.0%
!!! CTTTTAAGGAATTTATAGTC+TGG + chr1_3:35998560-35998579 None:intergenic 25.0%
! TCAAACTTATGAGAGTTATA+GGG + chr1_3:35998614-35998633 None:intergenic 25.0%
! ATCAAACTTATGAGAGTTAT+AGG + chr1_3:35998615-35998634 None:intergenic 25.0%
! TTTATATCCTTTGTGATTGT+TGG + chr1_3:35998672-35998691 None:intergenic 25.0%
! TATAAATGTTTAGATGCTTC+AGG - chr1_3:35998686-35998705 Msa0116770:intron 25.0%
! GATTTAAACAAGTCAAGATA+AGG + chr1_3:35998758-35998777 None:intergenic 25.0%
! AAATCATCTTTACTTAGCTT+TGG - chr1_3:35999686-35999705 Msa0116770:intron 25.0%
! TAGTATACCCAAATCTTTAA+GGG + chr1_3:35999864-35999883 None:intergenic 25.0%
!! GGTATACTAGATTATTTTCT+TGG - chr1_3:35999875-35999894 Msa0116770:intron 25.0%
!! TATTTTCTTTGTGAGAGAAA+AGG - chr1_3:36000582-36000601 Msa0116770:intron 25.0%
! TAGTTAACCCCTAATTAATA+AGG + chr1_3:35996047-35996066 None:intergenic 25.0%
! TTATTAATTAGGGGTTAACT+AGG - chr1_3:35996046-35996065 Msa0116770:intron 25.0%
! GAATGTACATTTATATAGGT+AGG + chr1_3:35996077-35996096 None:intergenic 25.0%
! GTGAGAATGTACATTTATAT+AGG + chr1_3:35996081-35996100 None:intergenic 25.0%
! CCTAATTTACTTAGAGAATA+AGG + chr1_3:36001150-36001169 None:intergenic 25.0%
! CCTTATTCTCTAAGTAAATT+AGG - chr1_3:36001147-36001166 Msa0116770:intron 25.0%
! TTATATAGAGTTAAGTAGCT+TGG + chr1_3:36001223-36001242 None:intergenic 25.0%
! TGATGTAATTTATTTGACCA+TGG + chr1_3:36001369-36001388 None:intergenic 25.0%
! TCAAATAAATTACATCAGAG+TGG - chr1_3:36001372-36001391 Msa0116770:intron 25.0%
! TTCTTCTCTTCAAATTCAAA+AGG + chr1_3:36001461-36001480 None:intergenic 25.0%
!!! ATTCATATTTCTTTTTCAGC+AGG + chr1_3:36002150-36002169 None:intergenic 25.0%
!! ACTTGCTACTGAAAATTATT+TGG - chr1_3:36002514-36002533 Msa0116770:intron 25.0%
! TGAAAATTATTTGGCAACAT+TGG - chr1_3:36002523-36002542 Msa0116770:intron 25.0%
! TTTCTTTCATTTGGTTAGAA+AGG - chr1_3:36002630-36002649 Msa0116770:intron 25.0%
! ATCACATGAAATGAATTTCT+AGG - chr1_3:36002925-36002944 Msa0116770:five_prime_UTR 25.0%
! TAAAATGAGAAAATGCATAG+TGG - chr1_3:36002960-36002979 Msa0116770:five_prime_UTR 25.0%
! AAAATGAGAAAATGCATAGT+GGG - chr1_3:36002961-36002980 Msa0116770:five_prime_UTR 25.0%
TATATATCGAGAGAAGAGAA+AGG - chr1_3:35978698-35978717 Msa0116770:three_prime_UTR 30.0%
ATATATCGAGAGAAGAGAAA+GGG - chr1_3:35978699-35978718 Msa0116770:three_prime_UTR 30.0%
!!! TATGCTTTTGCTTTTTGGTA+TGG - chr1_3:35978926-35978945 Msa0116770:three_prime_UTR 30.0%
!!! ATGCTTTTGCTTTTTGGTAT+GGG - chr1_3:35978927-35978946 Msa0116770:three_prime_UTR 30.0%
CTGCATTTATTGTCATATGA+TGG - chr1_3:35978974-35978993 Msa0116770:three_prime_UTR 30.0%
GTGTTAGTGAATAAAATGAC+AGG - chr1_3:35979264-35979283 Msa0116770:three_prime_UTR 30.0%
TTAGTTGGTTATGTCTAGTT+GGG - chr1_3:35979329-35979348 Msa0116770:three_prime_UTR 30.0%
AAAGAAAATGGAAGGAATAG+AGG - chr1_3:35979427-35979446 Msa0116770:three_prime_UTR 30.0%
AGAAATAAACCAAGAAATGC+AGG + chr1_3:35979729-35979748 None:intergenic 30.0%
! TATATGGTGATGAAAACTTG+TGG - chr1_3:35979755-35979774 Msa0116770:intron 30.0%
TAGCTTAAGAATCTAAACAC+AGG + chr1_3:35979828-35979847 None:intergenic 30.0%
! TTGAAAGTATATCATGGGAA+AGG + chr1_3:35979852-35979871 None:intergenic 30.0%
! CATTTATTGATGATTCACAC+TGG + chr1_3:35979878-35979897 None:intergenic 30.0%
AACAGAAAAGGGAACTTATA+TGG + chr1_3:35979904-35979923 None:intergenic 30.0%
TGGATGTCAGTTTATTATGT+GGG + chr1_3:35979956-35979975 None:intergenic 30.0%
ATGGATGTCAGTTTATTATG+TGG + chr1_3:35979957-35979976 None:intergenic 30.0%
! AAGGAAAATAGCCTTAAATC+TGG + chr1_3:35980039-35980058 None:intergenic 30.0%
!! CTTTTAGGAGATAATTTGGA+AGG + chr1_3:35980062-35980081 None:intergenic 30.0%
! ATGTCTTTGAAGGACTAATA+TGG + chr1_3:35980097-35980116 None:intergenic 30.0%
ATTGCAGATAATGTCTTTGA+AGG + chr1_3:35980107-35980126 None:intergenic 30.0%
TAATGAATGTGCATCTTTGA+GGG - chr1_3:35980202-35980221 Msa0116770:intron 30.0%
TGAGGACCATATATTAAAAC+AGG + chr1_3:35980357-35980376 None:intergenic 30.0%
CAGGTACTAACAATTTAGAT+TGG + chr1_3:35980488-35980507 None:intergenic 30.0%
TCTAAATTGTTAGTACCTGT+AGG - chr1_3:35980489-35980508 Msa0116770:intron 30.0%
ATGTAATATCATGCAATGCA+CGG + chr1_3:35980702-35980721 None:intergenic 30.0%
ATACAACATCATGCAGATAA+AGG + chr1_3:35980748-35980767 None:intergenic 30.0%
GCATAATGACATAACGTAAA+TGG - chr1_3:35980950-35980969 Msa0116770:intron 30.0%
! AACTTTTCTTCTGGGTTATT+TGG + chr1_3:35981142-35981161 None:intergenic 30.0%
GAATTTCCCATATTCAGATT+TGG + chr1_3:35981314-35981333 None:intergenic 30.0%
TGAATATGGGAAATTCTACA+TGG - chr1_3:35981318-35981337 Msa0116770:intron 30.0%
GAATATGGGAAATTCTACAT+GGG - chr1_3:35981319-35981338 Msa0116770:intron 30.0%
AATATGGGAAATTCTACATG+GGG - chr1_3:35981320-35981339 Msa0116770:intron 30.0%
! TAGTAGTCTTTTTCTGTTAC+TGG - chr1_3:35981452-35981471 Msa0116770:intron 30.0%
GTTGGTTAGTATGTTTAGAT+GGG + chr1_3:35981617-35981636 None:intergenic 30.0%
AGTTGGTTAGTATGTTTAGA+TGG + chr1_3:35981618-35981637 None:intergenic 30.0%
TATGATTTACACTTCTGGAT+TGG - chr1_3:35982056-35982075 Msa0116770:intron 30.0%
!!! GTCCACCTTTTTATTTTCAA+AGG - chr1_3:35982180-35982199 Msa0116770:intron 30.0%
! ACCCTTTGAAAATAAAAAGG+TGG + chr1_3:35982185-35982204 None:intergenic 30.0%
GCGAATATTTCCAATCATTA+AGG + chr1_3:35982217-35982236 None:intergenic 30.0%
! TATTCGCTTTAATCCCTTTT+TGG - chr1_3:35982230-35982249 Msa0116770:intron 30.0%
! GACTATTCTTTTTGCCAAAA+AGG + chr1_3:35982247-35982266 None:intergenic 30.0%
TTTGGCAAAAAGAATAGTCT+TGG - chr1_3:35982248-35982267 Msa0116770:intron 30.0%
! ATCAAGTTCAACAGCTTTAA+TGG + chr1_3:35982317-35982336 None:intergenic 30.0%
CTCTCTAATGGTATAATACA+TGG + chr1_3:35982418-35982437 None:intergenic 30.0%
CATGTATTATACCATTAGAG+AGG - chr1_3:35982416-35982435 Msa0116770:intron 30.0%
TGTATTATACCATTAGAGAG+GGG - chr1_3:35982418-35982437 Msa0116770:intron 30.0%
TGAAAGAAGAACATCATGAA+GGG - chr1_3:35982734-35982753 Msa0116770:intron 30.0%
! ATGAACATACATGATAGTGA+TGG + chr1_3:35983134-35983153 None:intergenic 30.0%
ACTATCATGTATGTTCATCT+AGG - chr1_3:35983136-35983155 Msa0116770:intron 30.0%
! AAAAGAGTTTCTTGTTTGAC+GGG + chr1_3:35983196-35983215 None:intergenic 30.0%
! CAAAAGAGTTTCTTGTTTGA+CGG + chr1_3:35983197-35983216 None:intergenic 30.0%
! ACAAGAAACTCTTTTGTTGA+CGG - chr1_3:35983201-35983220 Msa0116770:intron 30.0%
GATTGCAGTACAAATATTGA+TGG + chr1_3:35983233-35983252 None:intergenic 30.0%
AGAATCAAATGAAATGTCCA+TGG + chr1_3:35983270-35983289 None:intergenic 30.0%
TGATTTATCACCTTCGATAA+TGG - chr1_3:35983389-35983408 Msa0116770:intron 30.0%
AACTGAAGTTACATTTGGAT+GGG + chr1_3:35983415-35983434 None:intergenic 30.0%
AATCAAGGAATTAATAAGGG+TGG + chr1_3:35983438-35983457 None:intergenic 30.0%
GGGAATCAAGGAATTAATAA+GGG + chr1_3:35983441-35983460 None:intergenic 30.0%
AGGGAATCAAGGAATTAATA+AGG + chr1_3:35983442-35983461 None:intergenic 30.0%
CTAGAACAAGATTATCTTGA+AGG + chr1_3:35983462-35983481 None:intergenic 30.0%
TTTGTAAGGATCATGTATCA+TGG - chr1_3:35983557-35983576 Msa0116770:intron 30.0%
TTTAGGAATGTTGTCATTCA+CGG + chr1_3:35983594-35983613 None:intergenic 30.0%
! GAGATGTATTTTCTACTGTA+AGG + chr1_3:35983713-35983732 None:intergenic 30.0%
TAAAACGCATCAAATTTGGA+GGG + chr1_3:35983805-35983824 None:intergenic 30.0%
TGACTAAAACGCATCAAATT+TGG + chr1_3:35983809-35983828 None:intergenic 30.0%
AGTAGTATAGAGAAACTTGT+AGG + chr1_3:35983960-35983979 None:intergenic 30.0%
ATCTTGAAATGCTTTCAAGA+AGG - chr1_3:35984014-35984033 Msa0116770:intron 30.0%
! ACAAGGTATCTCAAAAAATC+AGG + chr1_3:35984113-35984132 None:intergenic 30.0%
! CTTTGGAAAACAACTTAGAA+TGG + chr1_3:35984146-35984165 None:intergenic 30.0%
ACTAACTAACAAACACACTA+AGG - chr1_3:35984254-35984273 Msa0116770:intron 30.0%
GCATCTTAGAATATGTGTTT+GGG + chr1_3:35984647-35984666 None:intergenic 30.0%
AGCATCTTAGAATATGTGTT+TGG + chr1_3:35984648-35984667 None:intergenic 30.0%
!! ACATATTCTAAGATGCTATC+AGG - chr1_3:35984651-35984670 Msa0116770:intron 30.0%
GAACATATAGTTATAAGTGG+GGG - chr1_3:35984761-35984780 Msa0116770:intron 30.0%
AAAGAATATTAGAATGCGGT+GGG + chr1_3:35984971-35984990 None:intergenic 30.0%
TGAATAAACCTAAATGCCTA+GGG + chr1_3:35985059-35985078 None:intergenic 30.0%
!! GTGTTGATTAGCATGAAAAA+TGG - chr1_3:35985099-35985118 Msa0116770:intron 30.0%
! GGTTTTTGTTAGATTCAAAG+TGG - chr1_3:35985120-35985139 Msa0116770:intron 30.0%
ATAAGCTATTCAAACCTAGT+GGG + chr1_3:35985291-35985310 None:intergenic 30.0%
TATAAGCTATTCAAACCTAG+TGG + chr1_3:35985292-35985311 None:intergenic 30.0%
CACACCCAATAATATATTTC+AGG + chr1_3:35985347-35985366 None:intergenic 30.0%
ACTATACAAGTCATATCTCT+AGG + chr1_3:35985387-35985406 None:intergenic 30.0%
ACTATGGTTGAATATCATCA+TGG - chr1_3:35985496-35985515 Msa0116770:intron 30.0%
ATATCATCATGGAAGAATTG+AGG - chr1_3:35985507-35985526 Msa0116770:intron 30.0%
TACCTTGGTACACTAAATTA+TGG + chr1_3:35985590-35985609 None:intergenic 30.0%
! ACCACTATCTAACTTTTCTT+TGG + chr1_3:35985646-35985665 None:intergenic 30.0%
GTCAAAGAAAAGTTAGATAG+TGG - chr1_3:35985815-35985834 Msa0116770:CDS 30.0%
ATAAGCTATTCTAACCTAGT+GGG + chr1_3:35986035-35986054 None:intergenic 30.0%
TATAAGCTATTCTAACCTAG+TGG + chr1_3:35986036-35986055 None:intergenic 30.0%
TAGAATCAGCAAATCATATC+AGG - chr1_3:35986149-35986168 Msa0116770:intron 30.0%
AGAATCAGCAAATCATATCA+GGG - chr1_3:35986150-35986169 Msa0116770:intron 30.0%
TAAAAAAGAGGTCCCTAATT+TGG + chr1_3:35986178-35986197 None:intergenic 30.0%
! GAAAAGTTTTCATCAGGTTT+TGG - chr1_3:35986397-35986416 Msa0116770:CDS 30.0%
!! TTGTAGATTTTGGCCTATTT+TGG + chr1_3:35987672-35987691 None:intergenic 30.0%
AAAATAGGCCAAAATCTACA+AGG - chr1_3:35987671-35987690 Msa0116770:intron 30.0%
!! CTTGTTATCCTTGTAGATTT+TGG + chr1_3:35987682-35987701 None:intergenic 30.0%
CAAAATCTACAAGGATAACA+AGG - chr1_3:35987680-35987699 Msa0116770:intron 30.0%
GACATTGGTAAATTTCATAG+TGG - chr1_3:35988114-35988133 Msa0116770:intron 30.0%
!!! TATTTTTAGCTCAAATCAGC+AGG + chr1_3:35988242-35988261 None:intergenic 30.0%
CAATGTATCTCTATAAATCG+GGG - chr1_3:35988415-35988434 Msa0116770:CDS 30.0%
TATAAATCGGGGTTAATGTT+TGG - chr1_3:35988426-35988445 Msa0116770:CDS 30.0%
TGATAGTAGCTTGATACAAA+AGG + chr1_3:35988452-35988471 None:intergenic 30.0%
TTCAAGATGGTATTAATGAC+AGG - chr1_3:35988543-35988562 Msa0116770:intron 30.0%
TAGGCACTAATCCTATTTAT+CGG + chr1_3:35989052-35989071 None:intergenic 30.0%
!! TATGAATACGATTTCTGGTT+TGG - chr1_3:35989307-35989326 Msa0116770:intron 30.0%
GCAATATTAGATCATCTTCT+AGG - chr1_3:35989487-35989506 Msa0116770:intron 30.0%
CGCAGTTGTAATAAGTAATA+TGG + chr1_3:35989521-35989540 None:intergenic 30.0%
ACCAAATATTCTTGATGCAA+CGG + chr1_3:35989707-35989726 None:intergenic 30.0%
ACCAAATATTCTTGATGCAA+CGG + chr1_3:35989707-35989726 None:intergenic 30.0%
TTTAAAAGGTGAAATCTAGC+CGG + chr1_3:35989907-35989926 None:intergenic 30.0%
CTAAAAAAGAAACTTAACCG+AGG + chr1_3:35990113-35990132 None:intergenic 30.0%
!!! CTCGGTTAAGTTTCTTTTTT+AGG - chr1_3:35990111-35990130 Msa0116770:intron 30.0%
!!! GGTTAAGTTTCTTTTTTAGG+AGG - chr1_3:35990114-35990133 Msa0116770:intron 30.0%
AAAAAGTTCATAGCTGACAA+AGG - chr1_3:35990444-35990463 Msa0116770:intron 30.0%
AACTTCCATCCATAACAATA+AGG - chr1_3:35990521-35990540 Msa0116770:intron 30.0%
AATGCAGTGCTCAAATAATT+TGG + chr1_3:35990825-35990844 None:intergenic 30.0%
! AATTATTTGAGCACTGCATT+AGG - chr1_3:35990825-35990844 Msa0116770:intron 30.0%
GAATTAGTAAAATTGAGGCT+TGG + chr1_3:35990865-35990884 None:intergenic 30.0%
TTCAATCTATAAGAACAAGG+GGG - chr1_3:35991086-35991105 Msa0116770:CDS 30.0%
TACAAAATTGCGCGAATTAT+AGG - chr1_3:35991112-35991131 Msa0116770:CDS 30.0%
ACAAAATTGCGCGAATTATA+GGG - chr1_3:35991113-35991132 Msa0116770:CDS 30.0%
!!! AACCAATTTTGTTTTATGCC+TGG - chr1_3:35991219-35991238 Msa0116770:intron 30.0%
!!! ACCAATTTTGTTTTATGCCT+GGG - chr1_3:35991220-35991239 Msa0116770:intron 30.0%
!! ATCCTTGATAGCTCTAATAT+AGG + chr1_3:35991409-35991428 None:intergenic 30.0%
ATATTTAAACCGCGTAACTT+GGG + chr1_3:35991675-35991694 None:intergenic 30.0%
TTACGCGGTTTAAATATCTT+GGG - chr1_3:35991678-35991697 Msa0116770:intron 30.0%
!! AATGTACCAGTTAAGTTGAA+AGG - chr1_3:35991803-35991822 Msa0116770:intron 30.0%
AACTTTCCTTTCAACTTAAC+TGG + chr1_3:35991812-35991831 None:intergenic 30.0%
AGTTGAAAGGAAAGTTCTAT+CGG - chr1_3:35991816-35991835 Msa0116770:intron 30.0%
TGTTGTATGGTACAAAATGT+TGG - chr1_3:35991858-35991877 Msa0116770:intron 30.0%
TGATAGAAAATAGGCTTAGA+TGG - chr1_3:35992015-35992034 Msa0116770:intron 30.0%
AAAATAGGCTTAGATGGTTT+GGG - chr1_3:35992021-35992040 Msa0116770:intron 30.0%
! GTTTCTCTAATAGTTTTCCT+AGG + chr1_3:35992131-35992150 None:intergenic 30.0%
AACCATTAGAAAGGATTTAG+AGG - chr1_3:35992148-35992167 Msa0116770:intron 30.0%
GTTCTAACATCAACCAAATT+TGG + chr1_3:35992188-35992207 None:intergenic 30.0%
GTTTGAACAAATCAATCTTG+TGG + chr1_3:35992311-35992330 None:intergenic 30.0%
AAAGTTACATGTGAGTTTGT+TGG - chr1_3:35992781-35992800 Msa0116770:intron 30.0%
GACAAAATTCCTAAAAAAGG+AGG + chr1_3:35992830-35992849 None:intergenic 30.0%
! ATATTTTATTCTGCAGGTAG+AGG - chr1_3:35992895-35992914 Msa0116770:intron 30.0%
CTCTGTTAACAAATCATCTT+GGG + chr1_3:35992936-35992955 None:intergenic 30.0%
CCCTTATATAAAGTAACAGA+AGG - chr1_3:35993181-35993200 Msa0116770:intron 30.0%
!! CCCTTCTGTTACTTTATATA+AGG + chr1_3:35993185-35993204 None:intergenic 30.0%
! TACATACTTTTCATGGGATT+GGG - chr1_3:35993225-35993244 Msa0116770:intron 30.0%
AAACAACGAACAAACCAAAA+GGG + chr1_3:35993292-35993311 None:intergenic 30.0%
TAAACAACGAACAAACCAAA+AGG + chr1_3:35993293-35993312 None:intergenic 30.0%
! AATATTTTGCATTTCTGTGC+TGG - chr1_3:35993367-35993386 Msa0116770:intron 30.0%
TGTGATGACAAAATTCTAGT+GGG + chr1_3:35993434-35993453 None:intergenic 30.0%
ATGTGATGACAAAATTCTAG+TGG + chr1_3:35993435-35993454 None:intergenic 30.0%
! TTCTTATTACTTCAGGTTCA+CGG - chr1_3:35993590-35993609 Msa0116770:intron 30.0%
TGAATTACTTAGCATGTTTC+AGG + chr1_3:35993718-35993737 None:intergenic 30.0%
!!! ATTTCAACTGCTGATTTTGT+TGG + chr1_3:35993768-35993787 None:intergenic 30.0%
GGTTATTTAGTAACATTAGC+TGG + chr1_3:35993995-35994014 None:intergenic 30.0%
TTCTCTCATGCAATAAAATG+GGG - chr1_3:35994412-35994431 Msa0116770:intron 30.0%
! ACCTTTATTTCTTCAGGTTA+TGG - chr1_3:35994577-35994596 Msa0116770:intron 30.0%
ACCATAACCTGAAGAAATAA+AGG + chr1_3:35994581-35994600 None:intergenic 30.0%
! TTTAAGCACTGCAATTGATA+TGG - chr1_3:35994655-35994674 Msa0116770:intron 30.0%
ATATATTTGAAGGGCTATGA+AGG + chr1_3:35994860-35994879 None:intergenic 30.0%
! CATTCCTTTTTGTATGTGAA+TGG - chr1_3:35995306-35995325 Msa0116770:intron 30.0%
TGATCCATTCACATACAAAA+AGG + chr1_3:35995313-35995332 None:intergenic 30.0%
AGAAATGGTTGAATGAAAAG+AGG - chr1_3:35995494-35995513 Msa0116770:intron 30.0%
ATACAGCACATAATAGGATT+TGG + chr1_3:35995522-35995541 None:intergenic 30.0%
!!! CATTTTGTTTTTTTGGTAGC+TGG - chr1_3:35995573-35995592 Msa0116770:intron 30.0%
! TGTTGATGAAGAACTAAATG+CGG + chr1_3:35995720-35995739 None:intergenic 30.0%
ACAATCAATACAATGACTAG+TGG + chr1_3:35996011-35996030 None:intergenic 30.0%
! AACTACTTGTTTGAAGGTTT+TGG + chr1_3:35996234-35996253 None:intergenic 30.0%
AACAGAAACTACTTGTTTGA+AGG + chr1_3:35996240-35996259 None:intergenic 30.0%
TCAATGAGATTAACTGAAAC+AGG + chr1_3:35996854-35996873 None:intergenic 30.0%
CAAAACCACAATTATACTGA+TGG - chr1_3:35996914-35996933 Msa0116770:intron 30.0%
CATTTCTTCCTCCAAAATTA+GGG + chr1_3:35996970-35996989 None:intergenic 30.0%
AAATTGTAAGGAACCAATAG+AGG + chr1_3:35997455-35997474 None:intergenic 30.0%
AAAGTAGTTTGAGGATGTAA+AGG + chr1_3:35997484-35997503 None:intergenic 30.0%
! ACTCACACTAACAAGATTTT+TGG + chr1_3:35997542-35997561 None:intergenic 30.0%
GATTTGACAAAACAGTGATT+AGG + chr1_3:35997604-35997623 None:intergenic 30.0%
TTGAAATTGAAACCAGTTGA+GGG + chr1_3:35997802-35997821 None:intergenic 30.0%
ATTGAAATTGAAACCAGTTG+AGG + chr1_3:35997803-35997822 None:intergenic 30.0%
TCACAGAAAATTAGTTCAAG+AGG + chr1_3:35998075-35998094 None:intergenic 30.0%
! CTAATTTTCTGTGATCTTTG+GGG - chr1_3:35998081-35998100 Msa0116770:intron 30.0%
ATGCTTATTCTAGATACACA+TGG - chr1_3:35998157-35998176 Msa0116770:intron 30.0%
ACAAAATATCTCAATAGCCT+TGG - chr1_3:35998309-35998328 Msa0116770:intron 30.0%
CATAGACATATTGTTGAAAC+TGG - chr1_3:35998393-35998412 Msa0116770:intron 30.0%
ATATGGTCGCAAAACTTTAA+TGG + chr1_3:35998447-35998466 None:intergenic 30.0%
AAGGTAAGTTGCAGTTAAAA+AGG + chr1_3:35998471-35998490 None:intergenic 30.0%
CTCATTAAACACAACATCTT+TGG + chr1_3:35998726-35998745 None:intergenic 30.0%
CAAAGATGTTGTGTTTAATG+AGG - chr1_3:35998724-35998743 Msa0116770:intron 30.0%
! AGACTCAGAATGAGAATTTT+GGG + chr1_3:35998876-35998895 None:intergenic 30.0%
CACTTGCAGTTACTTATAAT+TGG - chr1_3:35999492-35999511 Msa0116770:intron 30.0%
! AGCTCACTGCATTTTTATAT+TGG - chr1_3:35999757-35999776 Msa0116770:intron 30.0%
!! GTTGATGATATTATCATCAC+TGG - chr1_3:35999785-35999804 Msa0116770:intron 30.0%
CTAGTATACCCAAATCTTTA+AGG + chr1_3:35999865-35999884 None:intergenic 30.0%
! AGATTATTTTCTTGGCATAG+AGG - chr1_3:35999883-35999902 Msa0116770:intron 30.0%
CTCTCAAACCAAATATATCA+AGG - chr1_3:35999937-35999956 Msa0116770:intron 30.0%
AAGAAGGTCCTTGATATATT+TGG + chr1_3:35999948-35999967 None:intergenic 30.0%
! AATTTTGTACTAGATGCCAT+TGG + chr1_3:36000010-36000029 None:intergenic 30.0%
! GTCTAAATTTGGTTCAAGTA+CGG - chr1_3:36000030-36000049 Msa0116770:intron 30.0%
ACAATTGACCTGAAAAATGT+AGG + chr1_3:36000064-36000083 None:intergenic 30.0%
!!! ACATTTTTCAGGTCAATTGT+TGG - chr1_3:36000064-36000083 Msa0116770:intron 30.0%
AGATTATCACAATAGACATG+AGG + chr1_3:36000499-36000518 None:intergenic 30.0%
TTTGTGAGAGAAAAGGTTAT+AGG - chr1_3:36000589-36000608 Msa0116770:intron 30.0%
TTGTGAGAGAAAAGGTTATA+GGG - chr1_3:36000590-36000609 Msa0116770:intron 30.0%
!! TCAGTTTGTCTCTAAGATAA+AGG + chr1_3:36000696-36000715 None:intergenic 30.0%
TTTATCTTAGAGACAAACTG+AGG - chr1_3:36000695-36000714 Msa0116770:intron 30.0%
TTATCTTAGAGACAAACTGA+GGG - chr1_3:36000696-36000715 Msa0116770:intron 30.0%
ACAATCAATACAATGACTAG+TGG + chr1_3:35996011-35996030 None:intergenic 30.0%
!! AAATTCAAAAGGCACTCAAT+AGG + chr1_3:36001450-36001469 None:intergenic 30.0%
GATCAATTAAAGACTACATC+AGG - chr1_3:36001804-36001823 Msa0116770:intron 30.0%
! TGTCTAGGATTGATCTTAAA+CGG - chr1_3:36001835-36001854 Msa0116770:intron 30.0%
TGCAATCTTTCAAATTGTCA+TGG - chr1_3:36001963-36001982 Msa0116770:intron 30.0%
AATGCATATGATTTCTTGTC+TGG - chr1_3:36001986-36002005 Msa0116770:intron 30.0%
AAAATCTTCGTCTGAAAGAT+AGG + chr1_3:36002068-36002087 None:intergenic 30.0%
!!! GAAGATTTTGAAACTGTGTT+TGG - chr1_3:36002079-36002098 Msa0116770:intron 30.0%
!!! TTTTGAAACTGTGTTTGGAA+TGG - chr1_3:36002084-36002103 Msa0116770:intron 30.0%
! CATTTTATAAGTTGCCAAGA+TGG - chr1_3:36002116-36002135 Msa0116770:intron 30.0%
GATAAAACACACTATCCAAT+AGG + chr1_3:36002257-36002276 None:intergenic 30.0%
AAGAAGTAGCAGCAATTAAA+AGG + chr1_3:36002339-36002358 None:intergenic 30.0%
!! TTTTAATTGCTGCTACTTCT+TGG - chr1_3:36002338-36002357 Msa0116770:intron 30.0%
! ATAATTTTCAGTAGCAAGTG+AGG + chr1_3:36002513-36002532 None:intergenic 30.0%
!! CAACATTGGTTTACATATTG+TGG - chr1_3:36002537-36002556 Msa0116770:intron 30.0%
! TACGTGGTTTTTCTTTCATT+TGG - chr1_3:36002621-36002640 Msa0116770:intron 30.0%
TTTCATTTGGTTAGAAAGGT+GGG - chr1_3:36002634-36002653 Msa0116770:intron 30.0%
!!! GACCATTTTGATTCATTCTC+TGG - chr1_3:35978632-35978651 Msa0116770:three_prime_UTR 35.0%
AGCCAGAGAATGAATCAAAA+TGG + chr1_3:35978637-35978656 None:intergenic 35.0%
AAGAAGGTTTGAATTGGTTG+TGG + chr1_3:35978726-35978745 None:intergenic 35.0%
CGAAGAAAGAAGGTTTGAAT+TGG + chr1_3:35978732-35978751 None:intergenic 35.0%
! GAAAAGCGCGAAAATGAAAA+CGG + chr1_3:35978955-35978974 None:intergenic 35.0%
! TCAAATATTTTGCGCGGAAA+TGG + chr1_3:35979032-35979051 None:intergenic 35.0%
TGTAGATTCATACATTTGGC+TGG - chr1_3:35979070-35979089 Msa0116770:three_prime_UTR 35.0%
GTAGATTCATACATTTGGCT+GGG - chr1_3:35979071-35979090 Msa0116770:three_prime_UTR 35.0%
TAGATTCATACATTTGGCTG+GGG - chr1_3:35979072-35979091 Msa0116770:three_prime_UTR 35.0%
GTTAGTTGGTTATGTCTAGT+TGG - chr1_3:35979328-35979347 Msa0116770:three_prime_UTR 35.0%
GAATTAATAAAAGGGCAACC+CGG - chr1_3:35979528-35979547 Msa0116770:CDS 35.0%
CTTGTGTAAAAAACAGGGTA+AGG + chr1_3:35979620-35979639 None:intergenic 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG - chr1_3:35979620-35979639 Msa0116770:intron 35.0%
AGCCTCTTGTGTAAAAAACA+GGG + chr1_3:35979625-35979644 None:intergenic 35.0%
TCAGAAAATTAGGGTAAGGA+TGG + chr1_3:35979652-35979671 None:intergenic 35.0%
! TAAGTTCCCTTTTCTGTTTG+TGG - chr1_3:35979906-35979925 Msa0116770:CDS 35.0%
TTGCTACCACAAACAGAAAA+GGG + chr1_3:35979915-35979934 None:intergenic 35.0%
GGATGTCAGTTTATTATGTG+GGG + chr1_3:35979955-35979974 None:intergenic 35.0%
! ATAGCCTTAAATCTGGAATC+TGG + chr1_3:35980032-35980051 None:intergenic 35.0%
TAGGAGATAATTTGGAAGGA+AGG + chr1_3:35980058-35980077 None:intergenic 35.0%
! TGGCGATACTTAGATCTTTT+AGG + chr1_3:35980077-35980096 None:intergenic 35.0%
TTGGTGAGACTTCTGTATAT+TGG + chr1_3:35980138-35980157 None:intergenic 35.0%
GTAATGAATGTGCATCTTTG+AGG - chr1_3:35980201-35980220 Msa0116770:intron 35.0%
ATTTGACACTCCAACGATTA+GGG + chr1_3:35980322-35980341 None:intergenic 35.0%
AATTTGACACTCCAACGATT+AGG + chr1_3:35980323-35980342 None:intergenic 35.0%
AACAGCTTAAGTTCAGTATG+AGG + chr1_3:35980375-35980394 None:intergenic 35.0%
AAATTGTTAGTACCTGTAGG+TGG - chr1_3:35980492-35980511 Msa0116770:intron 35.0%
GACAAGAAAAACAGTTAACC+CGG - chr1_3:35980554-35980573 Msa0116770:intron 35.0%
ATGCAGATAAAGGTAGTAGT+AGG + chr1_3:35980738-35980757 None:intergenic 35.0%
CCAAATGGTTCTTGCATAAT+GGG + chr1_3:35980992-35981011 None:intergenic 35.0%
CCATTATGCAAGAACCATTT+GGG - chr1_3:35980990-35981009 Msa0116770:intron 35.0%
TAACCCAGAAGAAAAGTTGT+TGG - chr1_3:35981144-35981163 Msa0116770:intron 35.0%
AACCCAGAAGAAAAGTTGTT+GGG - chr1_3:35981145-35981164 Msa0116770:intron 35.0%
GTTGTAGAGGAACTGAAATA+TGG - chr1_3:35981257-35981276 Msa0116770:intron 35.0%
! GAGAATCGAGAATTTTCAAC+CGG - chr1_3:35981279-35981298 Msa0116770:intron 35.0%
CATTGCCCAAATCTGAATAT+GGG - chr1_3:35981305-35981324 Msa0116770:intron 35.0%
ATATGGGAAATTCTACATGG+GGG - chr1_3:35981321-35981340 Msa0116770:intron 35.0%
GGATTCATATATCATCTTGC+AGG - chr1_3:35981342-35981361 Msa0116770:intron 35.0%
TACAGGGTAATATTGGATGT+AGG + chr1_3:35981373-35981392 None:intergenic 35.0%
! ACAAACATTTGATCCGGTTT+TGG + chr1_3:35981534-35981553 None:intergenic 35.0%
AAACCGGATCAAATGTTTGT+AGG - chr1_3:35981534-35981553 Msa0116770:intron 35.0%
TGACCTACAAACATTTGATC+CGG + chr1_3:35981540-35981559 None:intergenic 35.0%
TTAGTATGTTTAGATGGGCA+GGG + chr1_3:35981612-35981631 None:intergenic 35.0%
AGAGTGTAAGAGAATTCAGT+TGG + chr1_3:35981635-35981654 None:intergenic 35.0%
! TTTACACTTCTGGATTGGAA+AGG - chr1_3:35982061-35982080 Msa0116770:intron 35.0%
ATCCTACAAGAATGCTCAAT+AGG + chr1_3:35982278-35982297 None:intergenic 35.0%
AAGAGTTGTCAGATTGAAAC+AGG - chr1_3:35982510-35982529 Msa0116770:intron 35.0%
TTCAATGAAGACCTTGCAAA+CGG + chr1_3:35982607-35982626 None:intergenic 35.0%
CAAGAATGAACACATCATCA+TGG + chr1_3:35982630-35982649 None:intergenic 35.0%
TGGTGCAAATTCCAATATTC+AGG - chr1_3:35982678-35982697 Msa0116770:intron 35.0%
CTGAAAGAAGAACATCATGA+AGG - chr1_3:35982733-35982752 Msa0116770:intron 35.0%
AAATGTGACGTTGCAATTGT+TGG - chr1_3:35982757-35982776 Msa0116770:intron 35.0%
TTTCCATCATCTGCAATATG+GGG + chr1_3:35982863-35982882 None:intergenic 35.0%
CTTTCCATCATCTGCAATAT+GGG + chr1_3:35982864-35982883 None:intergenic 35.0%
ACTTTCCATCATCTGCAATA+TGG + chr1_3:35982865-35982884 None:intergenic 35.0%
! AGTCAGATTCAGGTGAATTT+TGG - chr1_3:35982894-35982913 Msa0116770:intron 35.0%
CTGATTACCTTCTTAGCAAT+GGG + chr1_3:35982941-35982960 None:intergenic 35.0%
ACTGATTACCTTCTTAGCAA+TGG + chr1_3:35982942-35982961 None:intergenic 35.0%
CAATTCCTGCTCAATTGTAT+AGG - chr1_3:35982984-35983003 Msa0116770:intron 35.0%
ACATACCTATACAATTGAGC+AGG + chr1_3:35982992-35983011 None:intergenic 35.0%
ATCATATTTCTCTTCCACCA+TGG - chr1_3:35983250-35983269 Msa0116770:intron 35.0%
ATCAAATGAAATGTCCATGG+TGG + chr1_3:35983267-35983286 None:intergenic 35.0%
GATGAGAAGAAAACTGATGT+TGG + chr1_3:35983357-35983376 None:intergenic 35.0%
GAACTGAAGTTACATTTGGA+TGG + chr1_3:35983416-35983435 None:intergenic 35.0%
GATTATCTTGAAGGGAATCA+AGG + chr1_3:35983453-35983472 None:intergenic 35.0%
! CATGCAAATAAATGGACTCA+AGG + chr1_3:35983505-35983524 None:intergenic 35.0%
ACTCAAACTGTAGGATGTTT+AGG + chr1_3:35983611-35983630 None:intergenic 35.0%
! AACATCCTACAGTTTGAGTT+TGG - chr1_3:35983612-35983631 Msa0116770:intron 35.0%
AAACTCCAAACTCAAACTGT+AGG + chr1_3:35983620-35983639 None:intergenic 35.0%
CTAAAACGCATCAAATTTGG+AGG + chr1_3:35983806-35983825 None:intergenic 35.0%
AGCATTTCAAGATTAGAACG+AGG + chr1_3:35984007-35984026 None:intergenic 35.0%
GAAAACAACTTAGAATGGGT+TGG + chr1_3:35984141-35984160 None:intergenic 35.0%
ATTGAGGGATATCTTTGCTT+TGG + chr1_3:35984163-35984182 None:intergenic 35.0%
AACTAACAAACACACTAAGG+TGG - chr1_3:35984257-35984276 Msa0116770:intron 35.0%
! ACTTTTATTAGGTCAATGCG+AGG - chr1_3:35984320-35984339 Msa0116770:intron 35.0%
! TCTTTTCAGTGGATCACAAT+TGG + chr1_3:35984352-35984371 None:intergenic 35.0%
!!! ATCGGCTTTATTCTTTTCAG+TGG + chr1_3:35984363-35984382 None:intergenic 35.0%
ACTGAAAAGAATAAAGCCGA+TGG - chr1_3:35984362-35984381 Msa0116770:intron 35.0%
CACAATATGGGTCAAACAAA+AGG + chr1_3:35984441-35984460 None:intergenic 35.0%
AAAAGTTGGGGTCACAATAT+GGG + chr1_3:35984453-35984472 None:intergenic 35.0%
! ATATTGTGACCCCAACTTTT+GGG - chr1_3:35984453-35984472 Msa0116770:intron 35.0%
TAGCTCTTAGCTAATGTTTG+TGG - chr1_3:35984560-35984579 Msa0116770:intron 35.0%
GAAAGAATATTAGAATGCGG+TGG + chr1_3:35984972-35984991 None:intergenic 35.0%
GTGAATAAACCTAAATGCCT+AGG + chr1_3:35985060-35985079 None:intergenic 35.0%
TCATGCTAATCAACACATGA+TGG + chr1_3:35985095-35985114 None:intergenic 35.0%
AAGGGATAAGTGAACTACTA+TGG - chr1_3:35985480-35985499 Msa0116770:intron 35.0%
TAAAGTGAGATGAACCAATG+AGG - chr1_3:35985531-35985550 Msa0116770:intron 35.0%
TATCATCACAATAGCCTCAT+TGG + chr1_3:35985548-35985567 None:intergenic 35.0%
GTCCATAATTTAGTGTACCA+AGG - chr1_3:35985585-35985604 Msa0116770:intron 35.0%
ATTTAGTGTACCAAGGTAGA+AGG - chr1_3:35985592-35985611 Msa0116770:intron 35.0%
TAACATGTTTCCTTCTACCT+TGG + chr1_3:35985605-35985624 None:intergenic 35.0%
GGAAACATGTTAAAGTTGAC+AGG - chr1_3:35985613-35985632 Msa0116770:intron 35.0%
GCCAAAGAAAAGTTAGATAG+TGG - chr1_3:35985642-35985661 Msa0116770:intron 35.0%
ATTCTCTTTATCTCTTCCCA+AGG - chr1_3:35985675-35985694 Msa0116770:intron 35.0%
AGAGCAGATTTATCATCACA+AGG + chr1_3:35985558-35985577 None:intergenic 35.0%
TACCTTGGTACACTAGATTA+CGG + chr1_3:35985736-35985755 None:intergenic 35.0%
GGAAACATGTTAAAGTTGAC+AGG - chr1_3:35985613-35985632 Msa0116770:intron 35.0%
CATGCAGATCTTCTAACTAA+GGG - chr1_3:35985875-35985894 Msa0116770:CDS 35.0%
ATGCAGATCTTCTAACTAAG+GGG - chr1_3:35985876-35985895 Msa0116770:CDS 35.0%
! TTTTCTTCAACCAACTTGAG+AGG - chr1_3:35985953-35985972 Msa0116770:CDS 35.0%
GAATCAGCAAATCATATCAG+GGG - chr1_3:35986151-35986170 Msa0116770:intron 35.0%
!!! ATTAGGGACCTCTTTTTTAG+AGG - chr1_3:35986179-35986198 Msa0116770:intron 35.0%
ATTATGAATAGTGGTGAGTG+TGG - chr1_3:35986255-35986274 Msa0116770:intron 35.0%
! AAAACTTTTCGGATGATGAC+TGG + chr1_3:35986387-35986406 None:intergenic 35.0%
! TCATCCGAAAAGTTTTCATC+AGG - chr1_3:35986391-35986410 Msa0116770:CDS 35.0%
!! AACTTTCGGGTTGGAAAAAT+CGG + chr1_3:35986609-35986628 None:intergenic 35.0%
TCTGATGAAGCTGAAACTTT+CGG + chr1_3:35986623-35986642 None:intergenic 35.0%
GCAATTGAAAATCAGCAACT+TGG + chr1_3:35986672-35986691 None:intergenic 35.0%
GGATGTGAAAAGAAACATAC+TGG + chr1_3:35986979-35986998 None:intergenic 35.0%
TGATTGTAGCAAAGGCAATT+TGG + chr1_3:35987089-35987108 None:intergenic 35.0%
GTAGAGAAAATAGAGACAAC+AGG + chr1_3:35987137-35987156 None:intergenic 35.0%
TCTACATTACATCCACATGT+TGG - chr1_3:35987152-35987171 Msa0116770:intron 35.0%
CTACATTACATCCACATGTT+GGG - chr1_3:35987153-35987172 Msa0116770:intron 35.0%
AACAGTTTCTAAATGGTCGT+TGG - chr1_3:35987340-35987359 Msa0116770:intron 35.0%
ATTCCTTGCAGTATCATTGA+TGG - chr1_3:35987407-35987426 Msa0116770:intron 35.0%
TGAACTTTCTAAGTCACTGT+TGG - chr1_3:35987451-35987470 Msa0116770:intron 35.0%
! GAACAACAAATGCTATTTGC+TGG - chr1_3:35987475-35987494 Msa0116770:intron 35.0%
!! AGTTTGTTTCTGGCCAAAAT+AGG - chr1_3:35987656-35987675 Msa0116770:intron 35.0%
AGGATAACAAGGATTACTCA+AGG - chr1_3:35987691-35987710 Msa0116770:intron 35.0%
CAGTACAAATTGTTAGACAC+AGG + chr1_3:35987845-35987864 None:intergenic 35.0%
!! AAAAAGTACCCCTGTAAATG+AGG - chr1_3:35987924-35987943 Msa0116770:intron 35.0%
TGGAATTTCCTCATTTACAG+GGG + chr1_3:35987935-35987954 None:intergenic 35.0%
GTGGAATTTCCTCATTTACA+GGG + chr1_3:35987936-35987955 None:intergenic 35.0%
TGTGGAATTTCCTCATTTAC+AGG + chr1_3:35987937-35987956 None:intergenic 35.0%
ATTCCACATTTGCTTGAAGA+AGG - chr1_3:35987949-35987968 Msa0116770:intron 35.0%
GTTTGGCAAAGATAGTATTG+AGG - chr1_3:35988206-35988225 Msa0116770:intron 35.0%
! GGATTAGTATAATCTGTGAG+TGG + chr1_3:35988292-35988311 None:intergenic 35.0%
TAGTGGAATAGTTACAGAAC+AGG + chr1_3:35988584-35988603 None:intergenic 35.0%
AATCTTAGAGTGTGTTTGGA+TGG - chr1_3:35988688-35988707 Msa0116770:intron 35.0%
ATCTTAGAGTGTGTTTGGAT+GGG - chr1_3:35988689-35988708 Msa0116770:intron 35.0%
TGAGGGAATGTAATGTTATG+AGG - chr1_3:35988721-35988740 Msa0116770:intron 35.0%
GAGGGAATGTAATGTTATGA+GGG - chr1_3:35988722-35988741 Msa0116770:intron 35.0%
GAGGGAATTCAAATACTTTG+AGG - chr1_3:35988740-35988759 Msa0116770:intron 35.0%
TTGAGGTGAATTCCATTGTT+TGG - chr1_3:35988757-35988776 Msa0116770:intron 35.0%
TGAATTCCATTGTTTGGATG+AGG - chr1_3:35988763-35988782 Msa0116770:intron 35.0%
GAATTCCATTGTTTGGATGA+GGG - chr1_3:35988764-35988783 Msa0116770:intron 35.0%
GAGGGAATTCAAATACTTTG+AGG - chr1_3:35988740-35988759 Msa0116770:intron 35.0%
TGTGTTTGGATGAGGTAATT+TGG + chr1_3:35988865-35988884 None:intergenic 35.0%
! AGAAACTCTAAGAGTGTGTT+TGG + chr1_3:35988879-35988898 None:intergenic 35.0%
AGGCACTAATCCTATTTATC+GGG + chr1_3:35989051-35989070 None:intergenic 35.0%
TCAACACAGTATTTAGATCC+TGG - chr1_3:35989154-35989173 Msa0116770:intron 35.0%
GATAGATTAGAGCAACAGAA+TGG + chr1_3:35989207-35989226 None:intergenic 35.0%
TGGCAGAAAAACTGTATTGA+CGG + chr1_3:35989271-35989290 None:intergenic 35.0%
ACTGCTATGAATACGATTTC+TGG - chr1_3:35989302-35989321 Msa0116770:intron 35.0%
CACACTAAATAAGAGTGACT+TGG + chr1_3:35989410-35989429 None:intergenic 35.0%
AAATATTCTTGATGCAACGG+TGG + chr1_3:35989704-35989723 None:intergenic 35.0%
ACCGTTGCATCAAGAATATT+TGG - chr1_3:35989703-35989722 Msa0116770:intron 35.0%
ACCGTTGCATCAAGAATATT+TGG - chr1_3:35989703-35989722 Msa0116770:intron 35.0%
GATTTACACAGTTGAAGAAG+TGG - chr1_3:35989793-35989812 Msa0116770:intron 35.0%
ACAGTTGAAGAAGTGGTTAA+TGG - chr1_3:35989800-35989819 Msa0116770:intron 35.0%
CAGTTGAAGAAGTGGTTAAT+GGG - chr1_3:35989801-35989820 Msa0116770:intron 35.0%
!!! GTTTTGAAAGCTTTTGACCT+CGG - chr1_3:35990093-35990112 Msa0116770:intron 35.0%
!! TTTTTAGGAGGACCAAACAA+TGG - chr1_3:35990126-35990145 Msa0116770:intron 35.0%
TACAATGTCCAACTCTTTGA+AGG - chr1_3:35990165-35990184 Msa0116770:intron 35.0%
ACAATGTCCAACTCTTTGAA+GGG - chr1_3:35990166-35990185 Msa0116770:intron 35.0%
TCAGATTACAATACCTGAAC+AGG + chr1_3:35990196-35990215 None:intergenic 35.0%
TTGTAATCTGAACTTTGAGC+TGG - chr1_3:35990205-35990224 Msa0116770:intron 35.0%
TGTAATCTGAACTTTGAGCT+GGG - chr1_3:35990206-35990225 Msa0116770:intron 35.0%
TGGAAAAGAGCAACAAATTG+TGG + chr1_3:35990303-35990322 None:intergenic 35.0%
ATACCTTAAGAACTACCATG+GGG + chr1_3:35990326-35990345 None:intergenic 35.0%
GATACCTTAAGAACTACCAT+GGG + chr1_3:35990327-35990346 None:intergenic 35.0%
TGATACCTTAAGAACTACCA+TGG + chr1_3:35990328-35990347 None:intergenic 35.0%
! TGGTAGTTCTTAAGGTATCA+TGG - chr1_3:35990328-35990347 Msa0116770:intron 35.0%
! ACATTACTTGTCCCCATTTT+AGG - chr1_3:35990401-35990420 Msa0116770:intron 35.0%
! CATTACTTGTCCCCATTTTA+GGG - chr1_3:35990402-35990421 Msa0116770:intron 35.0%
! ATCCCATTAGCATGTTTCTA+GGG - chr1_3:35990589-35990608 Msa0116770:intron 35.0%
AAAGGTCGCAGAATTTCTAA+GGG - chr1_3:35990765-35990784 Msa0116770:intron 35.0%
CATTTCTGTGTTGGAAATTG+AGG + chr1_3:35990986-35991005 None:intergenic 35.0%
! CCAAAAGTACATTTCTGTGT+TGG + chr1_3:35990995-35991014 None:intergenic 35.0%
! CCAACACAGAAATGTACTTT+TGG - chr1_3:35990992-35991011 Msa0116770:intron 35.0%
CAAAATTGCGCGAATTATAG+GGG - chr1_3:35991114-35991133 Msa0116770:CDS 35.0%
AAAATTGCGCGAATTATAGG+GGG - chr1_3:35991115-35991134 Msa0116770:CDS 35.0%
TGAGTCATAGCATGAAGTTA+TGG - chr1_3:35991148-35991167 Msa0116770:CDS 35.0%
GAGTCATAGCATGAAGTTAT+GGG - chr1_3:35991149-35991168 Msa0116770:CDS 35.0%
ATAGCATGAAGTTATGGGAA+AGG - chr1_3:35991154-35991173 Msa0116770:CDS 35.0%
TAGCATGAAGTTATGGGAAA+GGG - chr1_3:35991155-35991174 Msa0116770:CDS 35.0%
GATTGAACGAAGACTAAGAA+AGG - chr1_3:35991179-35991198 Msa0116770:CDS 35.0%
TCCCAGGCATAAAACAAAAT+TGG + chr1_3:35991224-35991243 None:intergenic 35.0%
TGCCTATATTAGAGCTATCA+AGG - chr1_3:35991404-35991423 Msa0116770:intron 35.0%
! TCTGCAAAAAGCATACATCT+CGG + chr1_3:35991470-35991489 None:intergenic 35.0%
TGGAATGTAACTTCAGCAAA+CGG - chr1_3:35991603-35991622 Msa0116770:intron 35.0%
TATTTAAACCGCGTAACTTG+GGG + chr1_3:35991674-35991693 None:intergenic 35.0%
GATATTTAAACCGCGTAACT+TGG + chr1_3:35991676-35991695 None:intergenic 35.0%
GTTACGCGGTTTAAATATCT+TGG - chr1_3:35991677-35991696 Msa0116770:intron 35.0%
!! TTCTCCGTCATTTTGTACTA+TGG + chr1_3:35991705-35991724 None:intergenic 35.0%
AGACTAGACATGATAGGATT+AGG - chr1_3:35991945-35991964 Msa0116770:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr1_3:35992020-35992039 Msa0116770:intron 35.0%
TTGATCTACTCTTCTTACGA+CGG + chr1_3:35992072-35992091 None:intergenic 35.0%
CGTAAGAAGAGTAGATCAAA+TGG - chr1_3:35992073-35992092 Msa0116770:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr1_3:35992076-35992095 Msa0116770:intron 35.0%
GACCTCTAAATCCTTTCTAA+TGG + chr1_3:35992153-35992172 None:intergenic 35.0%
! CAATGAGTTGGATCCAAATT+TGG - chr1_3:35992172-35992191 Msa0116770:intron 35.0%
! TGGTTGATGTTAGAACACTA+TGG - chr1_3:35992192-35992211 Msa0116770:intron 35.0%
AACTTCTATTTGTGCCACAT+TGG - chr1_3:35992282-35992301 Msa0116770:intron 35.0%
AAGTTCAAAAAAGCAGTCTC+AGG + chr1_3:35992389-35992408 None:intergenic 35.0%
! ATATTTTTCCATGTTCAGCC+AGG - chr1_3:35992482-35992501 Msa0116770:intron 35.0%
!! GCTTTAAAGCATGCTAAAGA+AGG - chr1_3:35992509-35992528 Msa0116770:intron 35.0%
CTCATTAGTAACTTTCTTGC+TGG + chr1_3:35992585-35992604 None:intergenic 35.0%
CAGCAAGAAAGTTACTAATG+AGG - chr1_3:35992583-35992602 Msa0116770:intron 35.0%
AATGATAAGGTGAACAGATG+TGG + chr1_3:35992620-35992639 None:intergenic 35.0%
! TTTTGCTCTGTGAATCTATC+AGG - chr1_3:35992758-35992777 Msa0116770:intron 35.0%
CCTCTGTTAACAAATCATCT+TGG + chr1_3:35992937-35992956 None:intergenic 35.0%
!! CCAAGATGATTTGTTAACAG+AGG - chr1_3:35992934-35992953 Msa0116770:intron 35.0%
!!! AAATGCTTTTGAAATTGGCC+AGG - chr1_3:35993030-35993049 Msa0116770:intron 35.0%
ATAAATCAAGTACCCCAAGT+AGG + chr1_3:35993094-35993113 None:intergenic 35.0%
! CTACATACTTTTCATGGGAT+TGG - chr1_3:35993224-35993243 Msa0116770:intron 35.0%
TTGGGATTATACAAGAGCTA+AGG - chr1_3:35993243-35993262 Msa0116770:intron 35.0%
!!! AAGGGCCATTTTAATTCCTT+TGG + chr1_3:35993274-35993293 None:intergenic 35.0%
! AGGAATTAAAATGGCCCTTT+TGG - chr1_3:35993275-35993294 Msa0116770:intron 35.0%
TGAGCAGAACATAATTACCA+TGG - chr1_3:35993397-35993416 Msa0116770:intron 35.0%
TGGTCTAAAAAGATTGCTAG+TGG - chr1_3:35993494-35993513 Msa0116770:CDS 35.0%
GGTAAAATGATGTGATTGTG+AGG - chr1_3:35993515-35993534 Msa0116770:CDS 35.0%
! TCTTATTACTTCAGGTTCAC+GGG - chr1_3:35993591-35993610 Msa0116770:intron 35.0%
CATGAAGTAGAAACAGTTGT+TGG + chr1_3:35993829-35993848 None:intergenic 35.0%
! TGAATGGATCTAAAGCAACT+TGG + chr1_3:35993852-35993871 None:intergenic 35.0%
! GCAAAATAAGCTCTTTTGTG+AGG - chr1_3:35994225-35994244 Msa0116770:intron 35.0%
TCAATAGTGAGAAATTGTGG+CGG + chr1_3:35994334-35994353 None:intergenic 35.0%
TCCTCAATAGTGAGAAATTG+TGG + chr1_3:35994337-35994356 None:intergenic 35.0%
AAGTTTGTGTTGGACTATCT+CGG + chr1_3:35994528-35994547 None:intergenic 35.0%
AACGAGACAGAAATTTACAC+TGG + chr1_3:35994637-35994656 None:intergenic 35.0%
! AAACAAGGCTCAATTGATTC+TGG - chr1_3:35995137-35995156 Msa0116770:intron 35.0%
TGGTGACAGGAAAAATCAAA+CGG - chr1_3:35995157-35995176 Msa0116770:intron 35.0%
AGAAAACAACGAGTATGGTA+TGG - chr1_3:35995254-35995273 Msa0116770:intron 35.0%
TTTGTGGATCAATCAATCGT+TGG - chr1_3:35995459-35995478 Msa0116770:intron 35.0%
GATCAATCAATCGTTGGATT+CGG - chr1_3:35995465-35995484 Msa0116770:intron 35.0%
TGGATTCGGAAAAAGAGAAA+TGG - chr1_3:35995479-35995498 Msa0116770:intron 35.0%
AGATTGAATGGCTTAAACCA+TGG - chr1_3:35995653-35995672 Msa0116770:intron 35.0%
AGAACTAAATGCGGAGTTTA+AGG + chr1_3:35995711-35995730 None:intergenic 35.0%
CAACAAAGAAAGTTACTCCT+AGG - chr1_3:35995738-35995757 Msa0116770:intron 35.0%
CAAGTACTTAGTGGAGATAT+TGG - chr1_3:35995959-35995978 Msa0116770:intron 35.0%
ATGATACGAACTACCTTCAA+TGG - chr1_3:35996267-35996286 Msa0116770:intron 35.0%
GAACTTAGATCCATTACGAA+AGG - chr1_3:35996581-35996600 Msa0116770:intron 35.0%
CTTCAAGAACAACTTCAATC+AGG + chr1_3:35996694-35996713 None:intergenic 35.0%
CATTCACACTAGCAACAATA+GGG + chr1_3:35996736-35996755 None:intergenic 35.0%
AATTCAGAATCCCAATCTCA+TGG - chr1_3:35996881-35996900 Msa0116770:intron 35.0%
AGAATTAGGACCATGAGATT+GGG + chr1_3:35996894-35996913 None:intergenic 35.0%
CAGTACCATCAGTATAATTG+TGG + chr1_3:35996922-35996941 None:intergenic 35.0%
CACAATTATACTGATGGTAC+TGG - chr1_3:35996920-35996939 Msa0116770:intron 35.0%
CCAAAATTAGGGTTAGAGTT+AGG + chr1_3:35996959-35996978 None:intergenic 35.0%
! CCTAACTCTAACCCTAATTT+TGG - chr1_3:35996956-35996975 Msa0116770:intron 35.0%
! AACTCTAACCCTAATTTTGG+AGG - chr1_3:35996959-35996978 Msa0116770:intron 35.0%
CCATTTCTTCCTCCAAAATT+AGG + chr1_3:35996971-35996990 None:intergenic 35.0%
!! CCTAATTTTGGAGGAAGAAA+TGG - chr1_3:35996968-35996987 Msa0116770:intron 35.0%
! ACAGATTTGGCATTGAACAT+TGG + chr1_3:35997065-35997084 None:intergenic 35.0%
TGCCAAATCTGTTCAAAAAC+AGG - chr1_3:35997073-35997092 Msa0116770:intron 35.0%
!!! GACCTGTTTTTGAACAGATT+TGG + chr1_3:35997078-35997097 None:intergenic 35.0%
ACTGTAGTAATCATACTGTG+GGG + chr1_3:35997134-35997153 None:intergenic 35.0%
GACTGTAGTAATCATACTGT+GGG + chr1_3:35997135-35997154 None:intergenic 35.0%
TATGATTACTACAGTCCCTA+TGG - chr1_3:35997139-35997158 Msa0116770:intron 35.0%
ATGTTCTGCATCCATACATT+TGG + chr1_3:35997190-35997209 None:intergenic 35.0%
GCATTGTTGAATGAATTGTG+TGG + chr1_3:35997310-35997329 None:intergenic 35.0%
ACAATTCATTCAACAATGCC+TGG - chr1_3:35997311-35997330 Msa0116770:intron 35.0%
AACCTTGTCCATTTCCAATA+TGG + chr1_3:35997423-35997442 None:intergenic 35.0%
TATTGGAAATGGACAAGGTT+TGG - chr1_3:35997423-35997442 Msa0116770:intron 35.0%
! TCACTGTTTTGTCAAATCTC+AGG - chr1_3:35997606-35997625 Msa0116770:intron 35.0%
CAAATCTCAGGATTCTTCTA+AGG - chr1_3:35997618-35997637 Msa0116770:intron 35.0%
!!! TCTTCTAAGGTGCTTTTAAG+AGG - chr1_3:35997631-35997650 Msa0116770:intron 35.0%
!!! GTGCTTTTAAGAGGTATTCT+AGG - chr1_3:35997640-35997659 Msa0116770:intron 35.0%
!! ACACTAGAATTTTGAGAGAC+AGG + chr1_3:35997718-35997737 None:intergenic 35.0%
! AACTCTGCCTCTTTTCATTT+AGG - chr1_3:35997775-35997794 Msa0116770:intron 35.0%
GAACTAGATGTTGAACTACT+AGG + chr1_3:35997856-35997875 None:intergenic 35.0%
!!! TTTTGTACTGCTTGTTGTCT+TGG - chr1_3:35998000-35998019 Msa0116770:intron 35.0%
! GTCATTTGAGATGCAAAAGA+TGG + chr1_3:35998042-35998061 None:intergenic 35.0%
AAGGAAATAGGTATATCCAC+AGG + chr1_3:35998127-35998146 None:intergenic 35.0%
TACCTATTTCCTTACTTGTG+TGG - chr1_3:35998134-35998153 Msa0116770:intron 35.0%
ATCCACACAAGTAAGGAAAT+AGG + chr1_3:35998139-35998158 None:intergenic 35.0%
AATAAGCATCCACACAAGTA+AGG + chr1_3:35998146-35998165 None:intergenic 35.0%
!! ACTATTTCTGTCCAAACTGA+TGG - chr1_3:35998264-35998283 Msa0116770:intron 35.0%
!! TTTCAACTGAGCCATTTTGA+TGG + chr1_3:35998368-35998387 None:intergenic 35.0%
ATCAAAATGGCTCAGTTGAA+AGG - chr1_3:35998367-35998386 Msa0116770:intron 35.0%
! GTTGCAGTTAAAAAGGCATA+TGG + chr1_3:35998464-35998483 None:intergenic 35.0%
! GGTGATTCATTTGCTAAAAC+GGG + chr1_3:35998512-35998531 None:intergenic 35.0%
! GGGTGATTCATTTGCTAAAA+CGG + chr1_3:35998513-35998532 None:intergenic 35.0%
! ATGCACAACCAAAGCTTTTA+AGG + chr1_3:35998574-35998593 None:intergenic 35.0%
GAGTTATAGGGTCTCAAAAA+GGG + chr1_3:35998602-35998621 None:intergenic 35.0%
AGAGTTATAGGGTCTCAAAA+AGG + chr1_3:35998603-35998622 None:intergenic 35.0%
!! TTCAAAGGAGTGTGTTTTCT+TGG - chr1_3:35998640-35998659 Msa0116770:intron 35.0%
!! TCAAAGGAGTGTGTTTTCTT+GGG - chr1_3:35998641-35998660 Msa0116770:intron 35.0%
GGATATTCCAACAATCACAA+AGG - chr1_3:35998662-35998681 Msa0116770:intron 35.0%
GGAAGAAAAGTGGATAAAGT+GGG + chr1_3:35998812-35998831 None:intergenic 35.0%
AGTAGGTGAGTTTACAGTAA+AGG + chr1_3:35998852-35998871 None:intergenic 35.0%
! GACTCAGAATGAGAATTTTG+GGG + chr1_3:35998875-35998894 None:intergenic 35.0%
! CAGACTCAGAATGAGAATTT+TGG + chr1_3:35998877-35998896 None:intergenic 35.0%
AACTAATAGATGGAGTCTGA+GGG + chr1_3:35998925-35998944 None:intergenic 35.0%
GAGTGATGAGAACTAATAGA+TGG + chr1_3:35998935-35998954 None:intergenic 35.0%
!! GACAACATTATTTCTGTGTG+AGG + chr1_3:35998963-35998982 None:intergenic 35.0%
!! TTTTGAGGATGAATTCTGTG+AGG + chr1_3:35999103-35999122 None:intergenic 35.0%
! AGGAGTGTAGGATTAATTCT+AGG + chr1_3:35999169-35999188 None:intergenic 35.0%
!! AGAGCTGTTTTGTAAGTAGT+GGG + chr1_3:35999208-35999227 None:intergenic 35.0%
!! AAGAGCTGTTTTGTAAGTAG+TGG + chr1_3:35999209-35999228 None:intergenic 35.0%
TACTTACAAAACAGCTCTTC+AGG - chr1_3:35999210-35999229 Msa0116770:intron 35.0%
CTTTGCTTCATAATCAGACA+TGG - chr1_3:35999272-35999291 Msa0116770:intron 35.0%
ACATGCCATTGGATGTAAAT+GGG - chr1_3:35999321-35999340 Msa0116770:intron 35.0%
GAATACCCATTTACATCCAA+TGG + chr1_3:35999329-35999348 None:intergenic 35.0%
TTGGATGTAAATGGGTATTC+AGG - chr1_3:35999329-35999348 Msa0116770:intron 35.0%
TGGATGTAAATGGGTATTCA+GGG - chr1_3:35999330-35999349 Msa0116770:intron 35.0%
AGGGTAAAAGAAAATCCAGA+TGG - chr1_3:35999349-35999368 Msa0116770:intron 35.0%
AATTAGCACTCCATTTAGGA+AGG + chr1_3:35999546-35999565 None:intergenic 35.0%
CTTCAATTAGCACTCCATTT+AGG + chr1_3:35999550-35999569 None:intergenic 35.0%
GCTAATTGAAGAAGTCTACA+TGG - chr1_3:35999559-35999578 Msa0116770:CDS 35.0%
GTGTGCAAAGTAAACAAAGA+AGG + chr1_3:35999734-35999753 None:intergenic 35.0%
TGAGTTCTCCCTTAAAGATT+TGG - chr1_3:35999853-35999872 Msa0116770:intron 35.0%
GAGTTCTCCCTTAAAGATTT+GGG - chr1_3:35999854-35999873 Msa0116770:intron 35.0%
!! TCATGTTAGCTTTCTGAAGA+AGG + chr1_3:35999964-35999983 None:intergenic 35.0%
! TCTCAGATCCTACATTTTTC+AGG - chr1_3:36000053-36000072 Msa0116770:intron 35.0%
!! GGATATTTCAGGTCTTGTTA+TGG + chr1_3:36000107-36000126 None:intergenic 35.0%
TTCACAGAGTAGGATATTTC+AGG + chr1_3:36000118-36000137 None:intergenic 35.0%
AGGATACTTAGATATCTGCA+GGG - chr1_3:36000193-36000212 Msa0116770:intron 35.0%
AAGCTTCTGCTGAGATTATT+TGG - chr1_3:36000431-36000450 Msa0116770:intron 35.0%
AATATCCAATTCCATGTGCT+TGG + chr1_3:36000566-36000585 None:intergenic 35.0%
!! GTCTCTAAGATAAAGGAATC+TGG + chr1_3:36000689-36000708 None:intergenic 35.0%
CAAGTACTTAGTGGAGATAT+TGG - chr1_3:35995959-35995978 Msa0116770:intron 35.0%
CATACTCAAATTTCAACCAC+TGG - chr1_3:36000949-36000968 Msa0116770:intron 35.0%
ACAAATAGAATATGGACCAG+TGG + chr1_3:36000968-36000987 None:intergenic 35.0%
! AATGGCTAGTATTTTGTCCA+TGG - chr1_3:36001349-36001368 Msa0116770:intron 35.0%
! CTATAACGCGCTAATTTTTG+TGG - chr1_3:36001405-36001424 Msa0116770:intron 35.0%
GTGTTTACACAACCATTTCT+GGG - chr1_3:36001578-36001597 Msa0116770:intron 35.0%
!!! TTTCGGCTTATTTTACCAGT+TGG - chr1_3:36001603-36001622 Msa0116770:intron 35.0%
GGAATCTGAACAAGAATATG+TGG - chr1_3:36001737-36001756 Msa0116770:intron 35.0%
ATCTGAACAAGAATATGTGG+AGG - chr1_3:36001740-36001759 Msa0116770:intron 35.0%
ATAATGACCAAAGTAGTCAG+AGG - chr1_3:36001769-36001788 Msa0116770:intron 35.0%
CATCAGGAAAAAATGTGTCT+AGG - chr1_3:36001820-36001839 Msa0116770:intron 35.0%
! GCTTATTGATTACCTTTCCT+CGG - chr1_3:36002212-36002231 Msa0116770:intron 35.0%
ATTTCAAGATTACCGAGGAA+AGG + chr1_3:36002227-36002246 None:intergenic 35.0%
CTTGAAATGCACTTACCTAT+TGG - chr1_3:36002239-36002258 Msa0116770:intron 35.0%
CTTTCATTTGGTTAGAAAGG+TGG - chr1_3:36002633-36002652 Msa0116770:intron 35.0%
CTAGCGCAAGTGTAAAAAAA+CGG - chr1_3:36002763-36002782 Msa0116770:intron 35.0%
TAGCGCAAGTGTAAAAAAAC+GGG - chr1_3:36002764-36002783 Msa0116770:intron 35.0%
AAAGCAAAGACCAATTTGAC+TGG - chr1_3:36002995-36003014 Msa0116770:five_prime_UTR 35.0%
! CTTTGAAGATCCAGTCAAAT+TGG + chr1_3:36003008-36003027 None:intergenic 35.0%
TCTCTCTCTCTCTCTGTTAT+CGG - chr1_3:35978566-35978585 Msa0116770:three_prime_UTR 40.0%
AGAGAGAAGACGAAGAAAGA+AGG + chr1_3:35978742-35978761 None:intergenic 40.0%
!! ATCATCTTCTCTGAGATCTC+AGG - chr1_3:35978779-35978798 Msa0116770:three_prime_UTR 40.0%
AGATTCATACATTTGGCTGG+GGG - chr1_3:35979073-35979092 Msa0116770:three_prime_UTR 40.0%
TTAGTACATAAGGGCCTGTT+TGG - chr1_3:35979377-35979396 Msa0116770:three_prime_UTR 40.0%
TAGTACATAAGGGCCTGTTT+GGG - chr1_3:35979378-35979397 Msa0116770:three_prime_UTR 40.0%
CGTACAATACACCAAATGGT+GGG + chr1_3:35979594-35979613 None:intergenic 40.0%
CAGCCTCTTGTGTAAAAAAC+AGG + chr1_3:35979626-35979645 None:intergenic 40.0%
TAAACCAAGAAATGCAGGCA+AGG + chr1_3:35979724-35979743 None:intergenic 40.0%
CTTGCTACCACAAACAGAAA+AGG + chr1_3:35979916-35979935 None:intergenic 40.0%
TTCTGTTTGTGGTAGCAAGA+AGG - chr1_3:35979917-35979936 Msa0116770:CDS 40.0%
!! GTGCTTATCCTTGTTGTTGA+CGG - chr1_3:35979995-35980014 Msa0116770:intron 40.0%
GCTCATTCAGAGGACTAAAT+AGG + chr1_3:35980172-35980191 None:intergenic 40.0%
ATGTTAAGGATGAGAAGACC+AGG + chr1_3:35980582-35980601 None:intergenic 40.0%
CAGACAGTGTTCGTTGAAAA+AGG - chr1_3:35980830-35980849 Msa0116770:intron 40.0%
AGCTATGTCTAACACTCTGA+AGG - chr1_3:35980860-35980879 Msa0116770:intron 40.0%
!! GTCTAACACTCTGAAGGTTT+TGG - chr1_3:35980866-35980885 Msa0116770:intron 40.0%
CCCATTATGCAAGAACCATT+TGG - chr1_3:35980989-35981008 Msa0116770:intron 40.0%
CCCAAATGGTTCTTGCATAA+TGG + chr1_3:35980993-35981012 None:intergenic 40.0%
CTCTACATTTCAAGCCCAAA+TGG + chr1_3:35981007-35981026 None:intergenic 40.0%
! CACCCAACAACTTTTCTTCT+GGG + chr1_3:35981150-35981169 None:intergenic 40.0%
! TCACCCAACAACTTTTCTTC+TGG + chr1_3:35981151-35981170 None:intergenic 40.0%
GTTGGGTGAATGAACATGAA+TGG - chr1_3:35981162-35981181 Msa0116770:intron 40.0%
CCATATTCAGATTTGGGCAA+TGG + chr1_3:35981307-35981326 None:intergenic 40.0%
CCATTGCCCAAATCTGAATA+TGG - chr1_3:35981304-35981323 Msa0116770:intron 40.0%
TGCGTACTACAGGGTAATAT+TGG + chr1_3:35981380-35981399 None:intergenic 40.0%
! TCTAGGATTTGCGTACTACA+GGG + chr1_3:35981389-35981408 None:intergenic 40.0%
GTTACTGGATCAGAGAATTG+AGG - chr1_3:35981467-35981486 Msa0116770:intron 40.0%
TCAGAGAATTGAGGTTCAAC+AGG - chr1_3:35981476-35981495 Msa0116770:intron 40.0%
CAGAGAATTGAGGTTCAACA+GGG - chr1_3:35981477-35981496 Msa0116770:intron 40.0%
GAGGTTCAACAGGGAAAAAA+AGG - chr1_3:35981486-35981505 Msa0116770:intron 40.0%
!!! ACATTTGATCCGGTTTTGGA+GGG + chr1_3:35981530-35981549 None:intergenic 40.0%
!! AACATTTGATCCGGTTTTGG+AGG + chr1_3:35981531-35981550 None:intergenic 40.0%
GGATCAAATGTTTGTAGGTC+AGG - chr1_3:35981539-35981558 Msa0116770:intron 40.0%
AATGTTTGTAGGTCAGGAAG+AGG - chr1_3:35981545-35981564 Msa0116770:intron 40.0%
CTAGACTCTGGATTTCTTGA+GGG + chr1_3:35981589-35981608 None:intergenic 40.0%
GTTAGTATGTTTAGATGGGC+AGG + chr1_3:35981613-35981632 None:intergenic 40.0%
TTTACCTCTGCTACAGTAGT+TGG - chr1_3:35981671-35981690 Msa0116770:intron 40.0%
AAGTAACCCTAAGAGTCGAA+TGG + chr1_3:35981765-35981784 None:intergenic 40.0%
GGTTACTTACAGGCATTTCT+TGG - chr1_3:35981777-35981796 Msa0116770:intron 40.0%
TCATTCTTGCAGACAACACA+AGG - chr1_3:35982014-35982033 Msa0116770:intron 40.0%
GACCTATTGAGCATTCTTGT+AGG - chr1_3:35982273-35982292 Msa0116770:intron 40.0%
TTGAGCATTCTTGTAGGATG+AGG - chr1_3:35982279-35982298 Msa0116770:intron 40.0%
TGGACTTAGAAAACCTGAAG+AGG - chr1_3:35982450-35982469 Msa0116770:intron 40.0%
ACTTAGAAAACCTGAAGAGG+AGG - chr1_3:35982453-35982472 Msa0116770:intron 40.0%
TCAATGAAGACCTTGCAAAC+GGG + chr1_3:35982606-35982625 None:intergenic 40.0%
! CTTGGCTCTTTCCTGAATAT+TGG + chr1_3:35982692-35982711 None:intergenic 40.0%
CAATATTCAGGAAAGAGCCA+AGG - chr1_3:35982690-35982709 Msa0116770:intron 40.0%
TTAGACACTGAGTCAGATTC+AGG - chr1_3:35982884-35982903 Msa0116770:intron 40.0%
!!! GGTGAATTTTGGCTACTCTT+TGG - chr1_3:35982905-35982924 Msa0116770:intron 40.0%
!!! GAATTTTGGCTACTCTTTGG+TGG - chr1_3:35982908-35982927 Msa0116770:intron 40.0%
! TTTTGCTCCCATTGCTAAGA+AGG - chr1_3:35982931-35982950 Msa0116770:intron 40.0%
TGCTAAGAAGGTAATCAGTG+AGG - chr1_3:35982943-35982962 Msa0116770:intron 40.0%
TGAGGATGATATCATTCCAG+AGG - chr1_3:35982961-35982980 Msa0116770:intron 40.0%
GTCAAGTCAATACTGAGAGT+GGG + chr1_3:35983105-35983124 None:intergenic 40.0%
TGTCAAGTCAATACTGAGAG+TGG + chr1_3:35983106-35983125 None:intergenic 40.0%
GCAGTACAAATATTGATGGG+TGG + chr1_3:35983229-35983248 None:intergenic 40.0%
!! GAAAACTGATGTTGGTGGTT+TGG + chr1_3:35983349-35983368 None:intergenic 40.0%
GAGAAGAAAACTGATGTTGG+TGG + chr1_3:35983354-35983373 None:intergenic 40.0%
GGTGGAACTGAAGTTACATT+TGG + chr1_3:35983420-35983439 None:intergenic 40.0%
GGGCACTACATGCAAATAAA+TGG + chr1_3:35983513-35983532 None:intergenic 40.0%
GATCATGTATCATGGAACAC+TGG - chr1_3:35983565-35983584 Msa0116770:intron 40.0%
TACTGTAAGGAATGCTAGAG+GGG + chr1_3:35983700-35983719 None:intergenic 40.0%
CTACTGTAAGGAATGCTAGA+GGG + chr1_3:35983701-35983720 None:intergenic 40.0%
TCTACTGTAAGGAATGCTAG+AGG + chr1_3:35983702-35983721 None:intergenic 40.0%
ACTTTCCATGTCTACAAGTG+AGG + chr1_3:35983762-35983781 None:intergenic 40.0%
TCAAATTTGGAGGGAACGAT+AGG + chr1_3:35983796-35983815 None:intergenic 40.0%
AGCGGAACAACAATTATTGG+TGG + chr1_3:35983912-35983931 None:intergenic 40.0%
GGAAGCGGAACAACAATTAT+TGG + chr1_3:35983915-35983934 None:intergenic 40.0%
ACTAAGCCAACAATGTGAAG+AGG + chr1_3:35983936-35983955 None:intergenic 40.0%
CAAAAGTTGGGGTCACAATA+TGG + chr1_3:35984454-35984473 None:intergenic 40.0%
! CATATTGTGACCCCAACTTT+TGG - chr1_3:35984452-35984471 Msa0116770:intron 40.0%
CACTCTTATCCCAAAAGTTG+GGG + chr1_3:35984465-35984484 None:intergenic 40.0%
CCACTCTTATCCCAAAAGTT+GGG + chr1_3:35984466-35984485 None:intergenic 40.0%
TCCACTCTTATCCCAAAAGT+TGG + chr1_3:35984467-35984486 None:intergenic 40.0%
! TGCCTTACAAGCCTATTTTG+TGG - chr1_3:35984609-35984628 Msa0116770:intron 40.0%
! GCCTTACAAGCCTATTTTGT+GGG - chr1_3:35984610-35984629 Msa0116770:intron 40.0%
! CCTTACAAGCCTATTTTGTG+GGG - chr1_3:35984611-35984630 Msa0116770:intron 40.0%
AGTCATCTCTCATCCAATGT+GGG + chr1_3:35984740-35984759 None:intergenic 40.0%
AAGTCATCTCTCATCCAATG+TGG + chr1_3:35984741-35984760 None:intergenic 40.0%
!! ACCTTCCAAACCGGTTTTAT+GGG - chr1_3:35984792-35984811 Msa0116770:intron 40.0%
GCTAACATAGAATTGGGACA+CGG - chr1_3:35984922-35984941 Msa0116770:intron 40.0%
!! AATTTTTGGATGGGTTCCCT+AGG - chr1_3:35985040-35985059 Msa0116770:intron 40.0%
GGTCTATTAGTCCATTAGTC+AGG - chr1_3:35985265-35985284 Msa0116770:intron 40.0%
GTCATATCTCTAGGCAATGT+GGG + chr1_3:35985378-35985397 None:intergenic 40.0%
AGTCATATCTCTAGGCAATG+TGG + chr1_3:35985379-35985398 None:intergenic 40.0%
AGTTCCAGGAAATGTCACAA+GGG - chr1_3:35985462-35985481 Msa0116770:intron 40.0%
TTATCCCTTGTGACATTTCC+TGG + chr1_3:35985469-35985488 None:intergenic 40.0%
TATCATCACAAGGTTGCCTT+GGG + chr1_3:35985694-35985713 None:intergenic 40.0%
TTATCATCACAAGGTTGCCT+TGG + chr1_3:35985695-35985714 None:intergenic 40.0%
ATCTAGTGTACCAAGGTAGA+AGG - chr1_3:35985738-35985757 Msa0116770:CDS 40.0%
CAACATGTTTCCTTCTACCT+TGG + chr1_3:35985751-35985770 None:intergenic 40.0%
AGGAAACATGTTGTGTACCA+AGG - chr1_3:35985758-35985777 Msa0116770:CDS 40.0%
TAACATGTTTCCTTCGACCT+TGG + chr1_3:35985778-35985797 None:intergenic 40.0%
CCTTAGTTAGAAGATCTGCA+TGG + chr1_3:35985877-35985896 None:intergenic 40.0%
CCATGCAGATCTTCTAACTA+AGG - chr1_3:35985874-35985893 Msa0116770:CDS 40.0%
AACAACACTTCCTCTCAAGT+TGG + chr1_3:35985966-35985985 None:intergenic 40.0%
TCATATCAGGGGTCCAAATT+AGG - chr1_3:35986162-35986181 Msa0116770:intron 40.0%
CATATCAGGGGTCCAAATTA+GGG - chr1_3:35986163-35986182 Msa0116770:intron 40.0%
! AGTTCTGATTATGTGACCGA+TGG - chr1_3:35986324-35986343 Msa0116770:intron 40.0%
AATCAAGGCACACTTGTTTG+TGG + chr1_3:35986492-35986511 None:intergenic 40.0%
CAAACAAGTGTGCCTTGATT+TGG - chr1_3:35986492-35986511 Msa0116770:intron 40.0%
GCTGCTAGAGAATTATACAG+TGG - chr1_3:35986547-35986566 Msa0116770:intron 40.0%
!! ACTTTCGGGTTGGAAAAATC+GGG + chr1_3:35986608-35986627 None:intergenic 40.0%
CTGATGAAGCTGAAACTTTC+GGG + chr1_3:35986622-35986641 None:intergenic 40.0%
TGAAAATCAGCAACTTGGCA+GGG + chr1_3:35986667-35986686 None:intergenic 40.0%
TTGAAAATCAGCAACTTGGC+AGG + chr1_3:35986668-35986687 None:intergenic 40.0%
! TGGACAGTTTTCCTGAGATA+AGG - chr1_3:35986738-35986757 Msa0116770:intron 40.0%
TTCTGCATACAACTGTGCTT+TGG - chr1_3:35986778-35986797 Msa0116770:intron 40.0%
!! GTGCTTTGGAGTTTCTGAAT+TGG - chr1_3:35986792-35986811 Msa0116770:intron 40.0%
ACTGTGCAAACAGACATTTC+TGG - chr1_3:35986827-35986846 Msa0116770:intron 40.0%
AAACGAGAAGATCCATGAAG+AGG + chr1_3:35986864-35986883 None:intergenic 40.0%
TCTTCATGGATCTTCTCGTT+TGG - chr1_3:35986863-35986882 Msa0116770:intron 40.0%
TTAGTTAGATGTTTCCGTCC+TGG - chr1_3:35986911-35986930 Msa0116770:intron 40.0%
AATGTATACGAACACCAGGA+CGG + chr1_3:35986928-35986947 None:intergenic 40.0%
!! CGTATACATTGTGCTGCTTT+AGG - chr1_3:35986938-35986957 Msa0116770:intron 40.0%
AACAGTGGTTGAATAACAGC+TGG + chr1_3:35987004-35987023 None:intergenic 40.0%
TAGCCAGAGGATTTCAAAGA+TGG + chr1_3:35987065-35987084 None:intergenic 40.0%
ACAGGTCGAAAATAATAGCG+TGG + chr1_3:35987119-35987138 None:intergenic 40.0%
TCACCATCAATGATACTGCA+AGG + chr1_3:35987413-35987432 None:intergenic 40.0%
! AAATGCTATTTGCTGGACTG+TGG - chr1_3:35987482-35987501 Msa0116770:intron 40.0%
! GCTGAGGTATTTATCTGGTT+TGG - chr1_3:35987506-35987525 Msa0116770:intron 40.0%
!! AGGTATTTATCTGGTTTGGC+CGG - chr1_3:35987510-35987529 Msa0116770:intron 40.0%
AATTACTTACCTCAGCAGCT+TGG + chr1_3:35987568-35987587 None:intergenic 40.0%
! TATCTCCAGGAGTTTGTTTC+TGG - chr1_3:35987646-35987665 Msa0116770:intron 40.0%
AACTTTGATTCTTGGCCATC+AGG - chr1_3:35987739-35987758 Msa0116770:intron 40.0%
! AACTTTCCCTTTTCCATCCT+CGG + chr1_3:35987782-35987801 None:intergenic 40.0%
GATGGAAAAGGGAAAGTTAC+AGG - chr1_3:35987784-35987803 Msa0116770:intron 40.0%
! TTAAAGGCATGGAGAATCGA+TGG - chr1_3:35988063-35988082 Msa0116770:intron 40.0%
AATGTCCTCGTTCAGTAATG+AGG + chr1_3:35988100-35988119 None:intergenic 40.0%
TCATTACTGAACGAGGACAT+TGG - chr1_3:35988099-35988118 Msa0116770:intron 40.0%
GTACTGTACACATACCATTC+TGG - chr1_3:35988150-35988169 Msa0116770:intron 40.0%
ATCTGTGAGTGGTTTATGTG+TGG + chr1_3:35988281-35988300 None:intergenic 40.0%
AGTATCGTAGCTTATCTCCT+AGG - chr1_3:35988655-35988674 Msa0116770:intron 40.0%
TCTTAGAGTGTGTTTGGATG+GGG - chr1_3:35988690-35988709 Msa0116770:intron 40.0%
! TTGGATGGGGAAATGTTTTG+AGG - chr1_3:35988703-35988722 Msa0116770:intron 40.0%
!! TGGATGGGGAAATGTTTTGA+GGG - chr1_3:35988704-35988723 Msa0116770:intron 40.0%
ACATTCCCTCATCCAAACAA+TGG + chr1_3:35988772-35988791 None:intergenic 40.0%
! TCTAAGAGTGTGTTTGGATG+AGG + chr1_3:35988873-35988892 None:intergenic 40.0%
GAGTCTGTATCCCGATAAAT+AGG - chr1_3:35989038-35989057 Msa0116770:CDS 40.0%
CAGTGGTTTAACTGTGTAGA+TGG + chr1_3:35989238-35989257 None:intergenic 40.0%
ATTCATAGCAGTTGCGTTGA+TGG + chr1_3:35989294-35989313 None:intergenic 40.0%
TTTGTGCATACTTATGCTCC+AGG - chr1_3:35989331-35989350 Msa0116770:intron 40.0%
CTTTCTACCTTGTCCCATAT+CGG - chr1_3:35989430-35989449 Msa0116770:intron 40.0%
CTTCCATTAGAGACCGATAT+GGG + chr1_3:35989446-35989465 None:intergenic 40.0%
TCTTCCATTAGAGACCGATA+TGG + chr1_3:35989447-35989466 None:intergenic 40.0%
CCGGTAAATAATTACGTTGC+GGG + chr1_3:35989888-35989907 None:intergenic 40.0%
CCCGCAACGTAATTATTTAC+CGG - chr1_3:35989885-35989904 Msa0116770:intron 40.0%
GCCGGTAAATAATTACGTTG+CGG + chr1_3:35989889-35989908 None:intergenic 40.0%
AGGACCAAACAATGGCTATT+CGG - chr1_3:35990134-35990153 Msa0116770:intron 40.0%
GTAATCTGAACTTTGAGCTG+GGG - chr1_3:35990207-35990226 Msa0116770:intron 40.0%
TGCTCAAACCTCCCTAAAAT+GGG + chr1_3:35990416-35990435 None:intergenic 40.0%
! TGCTGCCTTATTGTTATGGA+TGG + chr1_3:35990529-35990548 None:intergenic 40.0%
! CTTGTGCTGCCTTATTGTTA+TGG + chr1_3:35990533-35990552 None:intergenic 40.0%
GATCCCATTAGCATGTTTCT+AGG - chr1_3:35990588-35990607 Msa0116770:intron 40.0%
AGCCCTAGAAACATGCTAAT+GGG + chr1_3:35990594-35990613 None:intergenic 40.0%
AAGCCCTAGAAACATGCTAA+TGG + chr1_3:35990595-35990614 None:intergenic 40.0%
TCGGAAGAATTCAATGACGT+TGG + chr1_3:35990664-35990683 None:intergenic 40.0%
CGATTGCAAGACAAAACAGT+CGG + chr1_3:35990683-35990702 None:intergenic 40.0%
! CGACTGTTTTGTCTTGCAAT+CGG - chr1_3:35990681-35990700 Msa0116770:intron 40.0%
! GACTGTTTTGTCTTGCAATC+GGG - chr1_3:35990682-35990701 Msa0116770:intron 40.0%
! TCTACAGTTTTCACTTGGCA+TGG - chr1_3:35990706-35990725 Msa0116770:intron 40.0%
! CTACAGTTTTCACTTGGCAT+GGG - chr1_3:35990707-35990726 Msa0116770:intron 40.0%
CAAAGGTCGCAGAATTTCTA+AGG - chr1_3:35990764-35990783 Msa0116770:intron 40.0%
TATGAGGACGAAGAAAATGC+CGG - chr1_3:35991038-35991057 Msa0116770:intron 40.0%
AAGAAAGGAGACTCGAGTTA+CGG - chr1_3:35991194-35991213 Msa0116770:intron 40.0%
GCTTTCCACAAAATCTCTCT+AGG + chr1_3:35991360-35991379 None:intergenic 40.0%
TAGAAGCAAGACGGAGTATA+TGG - chr1_3:35991583-35991602 Msa0116770:intron 40.0%
GGGTCCATAGTACAAAATGA+CGG - chr1_3:35991698-35991717 Msa0116770:intron 40.0%
TAAGCCATCGTATTCAAGCT+GGG - chr1_3:35991738-35991757 Msa0116770:intron 40.0%
TTGAAATGGAGAAGAGCTTC+AGG - chr1_3:35991764-35991783 Msa0116770:intron 40.0%
AAGTAAGTGTAGCAGAGATG+AGG - chr1_3:35991900-35991919 Msa0116770:intron 40.0%
GTGGTAAGACTAGACATGAT+AGG - chr1_3:35991939-35991958 Msa0116770:intron 40.0%
AATGACACCATTAGAGAGAG+TGG - chr1_3:35991968-35991987 Msa0116770:intron 40.0%
ATGACACCATTAGAGAGAGT+GGG - chr1_3:35991969-35991988 Msa0116770:intron 40.0%
AGTCATGTTAGAAGAGGTAG+AGG - chr1_3:35992101-35992120 Msa0116770:intron 40.0%
GGATTTAGAGGTCAATGAGT+TGG - chr1_3:35992160-35992179 Msa0116770:intron 40.0%
! AAGCCTTATCCCACTAAGTA+GGG + chr1_3:35992241-35992260 None:intergenic 40.0%
CAATCTTGTGGTAACCAATG+TGG + chr1_3:35992299-35992318 None:intergenic 40.0%
! TTTTATTCTGCAGGTAGAGG+AGG - chr1_3:35992898-35992917 Msa0116770:intron 40.0%
!! GCAGAAGTGTTTGTTTGGAT+TGG - chr1_3:35992980-35992999 Msa0116770:intron 40.0%
TCTCATATTCCTCTCCTACT+TGG - chr1_3:35993077-35993096 Msa0116770:intron 40.0%
CTCATATTCCTCTCCTACTT+GGG - chr1_3:35993078-35993097 Msa0116770:intron 40.0%
TCATATTCCTCTCCTACTTG+GGG - chr1_3:35993079-35993098 Msa0116770:intron 40.0%
CATAGATATGGCTGCATCTT+TGG - chr1_3:35993138-35993157 Msa0116770:intron 40.0%
AAGAGCTAAGGTATGTCCAA+AGG - chr1_3:35993255-35993274 Msa0116770:intron 40.0%
GTGACATACAGTTGAAGACA+AGG + chr1_3:35993347-35993366 None:intergenic 40.0%
!! TTTTGCATTTCTGTGCTGGT+TGG - chr1_3:35993371-35993390 Msa0116770:intron 40.0%
! GATTGTGAGGTTCATGCTTT+TGG - chr1_3:35993528-35993547 Msa0116770:CDS 40.0%
AAACAGGTGTCTCTACTCTT+TGG - chr1_3:35993626-35993645 Msa0116770:intron 40.0%
AACAGGTGTCTCTACTCTTT+GGG - chr1_3:35993627-35993646 Msa0116770:intron 40.0%
!!! GTTTTGGCTTTCAGTTGTTG+TGG + chr1_3:35993947-35993966 None:intergenic 40.0%
!! ATACGCTTTTTAACCTCGAG+AGG - chr1_3:35994095-35994114 Msa0116770:CDS 40.0%
!! TACGCTTTTTAACCTCGAGA+GGG - chr1_3:35994096-35994115 Msa0116770:CDS 40.0%
TGTGTGAACCACAGAAGTAA+TGG - chr1_3:35994160-35994179 Msa0116770:CDS 40.0%
GTGTGAACCACAGAAGTAAT+GGG - chr1_3:35994161-35994180 Msa0116770:CDS 40.0%
TATGTGACCCATTACTTCTG+TGG + chr1_3:35994171-35994190 None:intergenic 40.0%
! TGTCACTTCACATTCAATCG+CGG - chr1_3:35994266-35994285 Msa0116770:intron 40.0%
CAATAGTGAGAAATTGTGGC+GGG + chr1_3:35994333-35994352 None:intergenic 40.0%
GCCACAATTTCTCACTATTG+AGG - chr1_3:35994333-35994352 Msa0116770:intron 40.0%
TTTCTCACTATTGAGGATCG+TGG - chr1_3:35994340-35994359 Msa0116770:intron 40.0%
AGTTTGTGTTGGACTATCTC+GGG + chr1_3:35994527-35994546 None:intergenic 40.0%
CACGTAACATACACAACTAC+TGG + chr1_3:35994785-35994804 None:intergenic 40.0%
!! TCAATTGAGCCTTGTTTAGC+AGG + chr1_3:35995134-35995153 None:intergenic 40.0%
GGTGACAGGAAAAATCAAAC+GGG - chr1_3:35995158-35995177 Msa0116770:intron 40.0%
GAAAAATCAAACGGGTCAAG+TGG - chr1_3:35995166-35995185 Msa0116770:intron 40.0%
GCTTGAGAAAACAACGAGTA+TGG - chr1_3:35995249-35995268 Msa0116770:intron 40.0%
!! ATTGTTGCTGGTTCTATCTG+TGG - chr1_3:35995381-35995400 Msa0116770:intron 40.0%
!! TTGTTGCTGGTTCTATCTGT+GGG - chr1_3:35995382-35995401 Msa0116770:intron 40.0%
AATGGCTTAGAAGGCAGAAT+GGG + chr1_3:35995425-35995444 None:intergenic 40.0%
CGATTGATTGATCCACAAAG+AGG + chr1_3:35995458-35995477 None:intergenic 40.0%
CAGTCACAAGAGAGATTGAA+TGG - chr1_3:35995641-35995660 Msa0116770:intron 40.0%
TTGAATGGCTTAAACCATGG+AGG - chr1_3:35995656-35995675 Msa0116770:intron 40.0%
! GATCCTTGACCTTTTACAGA+TGG + chr1_3:35995764-35995783 None:intergenic 40.0%
TTACCTGAAATGCTACTCTC+TGG + chr1_3:35995887-35995906 None:intergenic 40.0%
AGAATCCTGCTTACACTGAA+TGG - chr1_3:35996399-35996418 Msa0116770:intron 40.0%
GAATCCTGCTTACACTGAAT+GGG - chr1_3:35996400-35996419 Msa0116770:intron 40.0%
CGAAATCGTTGAAAGAATCC+AGG + chr1_3:35996450-35996469 None:intergenic 40.0%
TCAGAGTCTCTTGCTTCAAT+TGG - chr1_3:35996647-35996666 Msa0116770:intron 40.0%
ACAATAGGGTCAAACTCTTC+AGG + chr1_3:35996722-35996741 None:intergenic 40.0%
GCATTCACACTAGCAACAAT+AGG + chr1_3:35996737-35996756 None:intergenic 40.0%
TAGTGTGAATGCGAAATCTG+AGG - chr1_3:35996745-35996764 Msa0116770:intron 40.0%
GAGAATTAGGACCATGAGAT+TGG + chr1_3:35996895-35996914 None:intergenic 40.0%
CTCTGAATCTTCCACCAAAA+CGG + chr1_3:35997015-35997034 None:intergenic 40.0%
CATTGGATCTTCCACCAAAA+CGG + chr1_3:35997048-35997067 None:intergenic 40.0%
GGACTGTAGTAATCATACTG+TGG + chr1_3:35997136-35997155 None:intergenic 40.0%
TTCTGCATCCATACATTTGG+AGG + chr1_3:35997187-35997206 None:intergenic 40.0%
AGCATTCTGGACAGTTTCTT+AGG - chr1_3:35997221-35997240 Msa0116770:intron 40.0%
GATCAGGTCCATATTGGAAA+TGG - chr1_3:35997412-35997431 Msa0116770:intron 40.0%
GTCCATATTGGAAATGGACA+AGG - chr1_3:35997418-35997437 Msa0116770:intron 40.0%
GGTTTGGCTATTACCTCTAT+TGG - chr1_3:35997439-35997458 Msa0116770:intron 40.0%
TGGTTATAGAGGGAACAAGA+AGG + chr1_3:35997522-35997541 None:intergenic 40.0%
!! AGAGGTATTCTAGGACATGA+TGG - chr1_3:35997649-35997668 Msa0116770:intron 40.0%
TGAGGGACCTAAATGAAAAG+AGG + chr1_3:35997785-35997804 None:intergenic 40.0%
TTTCATTTAGGTCCCTCAAC+TGG - chr1_3:35997787-35997806 Msa0116770:intron 40.0%
! CAGTCTTTTCCTTCCATGTA+TGG - chr1_3:35997880-35997899 Msa0116770:intron 40.0%
TTCCTTCCATGTATGGTATC+TGG - chr1_3:35997887-35997906 Msa0116770:intron 40.0%
!! TACTGCTTGTTGTCTTGGTA+AGG - chr1_3:35998005-35998024 Msa0116770:intron 40.0%
GAAATAGGTATATCCACAGG+AGG + chr1_3:35998124-35998143 None:intergenic 40.0%
! GTGTGAGATTTGAGTTTCAG+AGG + chr1_3:35998189-35998208 None:intergenic 40.0%
ATTTCTGTCCAAACTGATGG+AGG - chr1_3:35998267-35998286 Msa0116770:intron 40.0%
CTGCAACTTACCTTATCAAC+AGG - chr1_3:35998477-35998496 Msa0116770:intron 40.0%
GTGTAGGTAACCTGTTGATA+AGG + chr1_3:35998490-35998509 None:intergenic 40.0%
! TCATTTGCTAAAACGGGTGT+AGG + chr1_3:35998506-35998525 None:intergenic 40.0%
! GTGTGTTCTGTTTTACCAGA+TGG - chr1_3:35998785-35998804 Msa0116770:intron 40.0%
GGGAAGAAAAGTGGATAAAG+TGG + chr1_3:35998813-35998832 None:intergenic 40.0%
ACAGTAAAGGTTGTTGAGAC+AGG + chr1_3:35998839-35998858 None:intergenic 40.0%
!! GAATGAGAATTTTGGGGAGT+AGG + chr1_3:35998869-35998888 None:intergenic 40.0%
GTGTTTGATATGGGAGTAGT+AGG + chr1_3:35998902-35998921 None:intergenic 40.0%
ACTAATAGATGGAGTCTGAG+GGG + chr1_3:35998924-35998943 None:intergenic 40.0%
GAACTAATAGATGGAGTCTG+AGG + chr1_3:35998926-35998945 None:intergenic 40.0%
!!! GAGGAATTTTGAGATGGAGA+GGG + chr1_3:35999016-35999035 None:intergenic 40.0%
!!! TGAGGAATTTTGAGATGGAG+AGG + chr1_3:35999017-35999036 None:intergenic 40.0%
!! TCAGGTGAGGAATTTTGAGA+TGG + chr1_3:35999022-35999041 None:intergenic 40.0%
! CTCATTGAGTGAAGGTTTTG+AGG + chr1_3:35999118-35999137 None:intergenic 40.0%
ATGAGAACGAGAGGTAAACA+TGG - chr1_3:35999133-35999152 Msa0116770:intron 40.0%
! ACATGAGTCAAAAGGAGTGT+AGG + chr1_3:35999181-35999200 None:intergenic 40.0%
! TGCATTGCTAAATGCCACTT+AGG + chr1_3:35999238-35999257 None:intergenic 40.0%
GACATGCCATTGGATGTAAA+TGG - chr1_3:35999320-35999339 Msa0116770:intron 40.0%
TACTTGTTTACAGTGCCATC+TGG + chr1_3:35999367-35999386 None:intergenic 40.0%
TGGCACTGTAAACAAGTACA+AGG - chr1_3:35999369-35999388 Msa0116770:intron 40.0%
! AAGGGTTTTCATCAACAAGC+AGG - chr1_3:35999406-35999425 Msa0116770:intron 40.0%
!! TACAATGAGACTTTTTCCCC+TGG - chr1_3:35999436-35999455 Msa0116770:intron 40.0%
TAATTGGACTCTTCAGCAGT+TGG - chr1_3:35999508-35999527 Msa0116770:intron 40.0%
GTGAACAATGCCTTCCTAAA+TGG - chr1_3:35999533-35999552 Msa0116770:CDS 40.0%
TTGTCAGAAGATTCAAAGCC+AGG + chr1_3:35999593-35999612 None:intergenic 40.0%
! CCTTGTGTAGTTTGCATACA+AGG + chr1_3:35999619-35999638 None:intergenic 40.0%
CCTTGTATGCAAACTACACA+AGG - chr1_3:35999616-35999635 Msa0116770:intron 40.0%
AAACTACACAAGGCTCTCTA+TGG - chr1_3:35999626-35999645 Msa0116770:intron 40.0%
AACTACACAAGGCTCTCTAT+GGG - chr1_3:35999627-35999646 Msa0116770:intron 40.0%
AATCTCTCAAACCATGCTCT+GGG + chr1_3:35999665-35999684 None:intergenic 40.0%
CATCACTGGAAACTCAAAAC+TGG - chr1_3:35999799-35999818 Msa0116770:intron 40.0%
GCAAACTTTGTTCACAGAGT+AGG + chr1_3:36000128-36000147 None:intergenic 40.0%
CAAGGGGATTTGATAAGAAC+TGG + chr1_3:36000150-36000169 None:intergenic 40.0%
GAGGATACTTAGATATCTGC+AGG - chr1_3:36000192-36000211 Msa0116770:intron 40.0%
! TGCAGGGTACTTTAAACCAT+GGG - chr1_3:36000209-36000228 Msa0116770:intron 40.0%
AGTGATTGCAATAGGTTCAG+TGG + chr1_3:36000257-36000276 None:intergenic 40.0%
ACTGAACCTATTGCAATCAC+TGG - chr1_3:36000256-36000275 Msa0116770:intron 40.0%
CAAAAGCCAGTGATTGCAAT+AGG + chr1_3:36000265-36000284 None:intergenic 40.0%
TGCACTAGATCTAGCTACAA+GGG + chr1_3:36000386-36000405 None:intergenic 40.0%
GCAATTCATTGAGAAGAGAC+TGG + chr1_3:36000459-36000478 None:intergenic 40.0%
AAGAACCAAGCACATGGAAT+TGG - chr1_3:36000558-36000577 Msa0116770:intron 40.0%
GAGAGAAAAGGTTATAGGGA+AGG - chr1_3:36000594-36000613 Msa0116770:intron 40.0%
AAGATAAAGGAATCTGGCAG+TGG + chr1_3:36000683-36000702 None:intergenic 40.0%
! GTGGATACCTTTAAAAACCC+TGG - chr1_3:36001424-36001443 Msa0116770:intron 40.0%
! CAATAGGCCAGGGTTTTTAA+AGG + chr1_3:36001434-36001453 None:intergenic 40.0%
TTGCCTATGAAGATTCCTCT+AGG + chr1_3:36001526-36001545 None:intergenic 40.0%
GAGGAATCTTCATAGGCAAT+AGG - chr1_3:36001527-36001546 Msa0116770:intron 40.0%
CGTGTTTACACAACCATTTC+TGG - chr1_3:36001577-36001596 Msa0116770:intron 40.0%
! ACAACCATTTCTGGGTGTTT+CGG - chr1_3:36001586-36001605 Msa0116770:intron 40.0%
AGAAACTTCTTCCACTTCCT+TGG + chr1_3:36001691-36001710 None:intergenic 40.0%
GAACAAGAATATGTGGAGGA+TGG - chr1_3:36001744-36001763 Msa0116770:intron 40.0%
TGAATGTCCTCTGACTACTT+TGG + chr1_3:36001779-36001798 None:intergenic 40.0%
GATTGATCTTAAACGGAGAG+AGG - chr1_3:36001842-36001861 Msa0116770:intron 40.0%
GATTTAATAAAGTCAGGGGC+AGG + chr1_3:36001915-36001934 None:intergenic 40.0%
AGTGCATTTCAAGATTACCG+AGG + chr1_3:36002232-36002251 None:intergenic 40.0%
! TGTTTTATCGATAAACCGCG+TGG - chr1_3:36002268-36002287 Msa0116770:intron 40.0%
ACTGTTCATATGAATCCACG+CGG + chr1_3:36002286-36002305 None:intergenic 40.0%
ATATGAACAGTGATGCTGCA+TGG - chr1_3:36002295-36002314 Msa0116770:intron 40.0%
GCAATGAAGACACTAGAAAC+TGG - chr1_3:36002559-36002578 Msa0116770:intron 40.0%
TGAAGACACTAGAAACTGGA+CGG - chr1_3:36002563-36002582 Msa0116770:intron 40.0%
! AACTAGCGCAGTGGTATTTT+CGG + chr1_3:36002740-36002759 None:intergenic 40.0%
!! GGTCTTTGCTTTTCATGCAT+TGG + chr1_3:36002987-36003006 None:intergenic 40.0%
! GGGGGATTGAATTTCAAGTG+TGG - chr1_3:35979091-35979110 Msa0116770:three_prime_UTR 45.0%
GCGTACAATACACCAAATGG+TGG + chr1_3:35979595-35979614 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr1_3:35979598-35979617 None:intergenic 45.0%
CCAGAGATTGGCACATTAGA+TGG + chr1_3:35979976-35979995 None:intergenic 45.0%
CCATCTAATGTGCCAATCTC+TGG - chr1_3:35979973-35979992 Msa0116770:intron 45.0%
CAAGGATAAGCACCAGAGAT+TGG + chr1_3:35979988-35980007 None:intergenic 45.0%
TAGTCAAGCCGTCAACAACA+AGG + chr1_3:35980006-35980025 None:intergenic 45.0%
ACCGCCAGATTCCAGATTTA+AGG - chr1_3:35980025-35980044 Msa0116770:intron 45.0%
! GCCTTAAATCTGGAATCTGG+CGG + chr1_3:35980029-35980048 None:intergenic 45.0%
CCAAAGATTCGCTCATTCAG+AGG + chr1_3:35980182-35980201 None:intergenic 45.0%
CCTCTGAATGAGCGAATCTT+TGG - chr1_3:35980179-35980198 Msa0116770:intron 45.0%
!! AAAGCTAGCTTTCCACCTAC+AGG + chr1_3:35980507-35980526 None:intergenic 45.0%
!! GTTTTGGATCCTGCATTCCA+GGG - chr1_3:35980882-35980901 Msa0116770:intron 45.0%
TCAGATTTGGGCAATGGAAC+CGG + chr1_3:35981301-35981320 None:intergenic 45.0%
! GTCTAGGATTTGCGTACTAC+AGG + chr1_3:35981390-35981409 None:intergenic 45.0%
TGAATATCCCCCTCCAAAAC+CGG - chr1_3:35981518-35981537 Msa0116770:intron 45.0%
!!! ATTTGATCCGGTTTTGGAGG+GGG + chr1_3:35981528-35981547 None:intergenic 45.0%
!!! CATTTGATCCGGTTTTGGAG+GGG + chr1_3:35981529-35981548 None:intergenic 45.0%
GCTAGACTCTGGATTTCTTG+AGG + chr1_3:35981590-35981609 None:intergenic 45.0%
! TCTAACCCCTTTTCCTACCA+CGG - chr1_3:35981719-35981738 Msa0116770:intron 45.0%
CGACTCTTAGGGTTACTTAC+AGG - chr1_3:35981767-35981786 Msa0116770:intron 45.0%
! TTCTGGGGGATAGTTTCAGT+TGG - chr1_3:35981866-35981885 Msa0116770:intron 45.0%
GGGATAGTTTCAGTTGGCAT+GGG - chr1_3:35981872-35981891 Msa0116770:intron 45.0%
GGATAGTTTCAGTTGGCATG+GGG - chr1_3:35981873-35981892 Msa0116770:intron 45.0%
TTGCAGACAACACAAGGCAA+AGG - chr1_3:35982020-35982039 Msa0116770:intron 45.0%
GATTGGAAAGGATACGAGTC+AGG - chr1_3:35982073-35982092 Msa0116770:intron 45.0%
GTTGAACTTGATGCTGCTCT+TGG - chr1_3:35982325-35982344 Msa0116770:intron 45.0%
GTTTCAAACTCCTCCTCTTC+AGG + chr1_3:35982466-35982485 None:intergenic 45.0%
ACACGCTTGTATGTATGCAG+AGG - chr1_3:35982484-35982503 Msa0116770:intron 45.0%
CACGCTTGTATGTATGCAGA+GGG - chr1_3:35982485-35982504 Msa0116770:intron 45.0%
TGACGTTGCAATTGTTGGTG+AGG - chr1_3:35982762-35982781 Msa0116770:intron 45.0%
! GACGTTGCAATTGTTGGTGA+GGG - chr1_3:35982763-35982782 Msa0116770:intron 45.0%
CTACCCCATATTGCAGATGA+TGG - chr1_3:35982857-35982876 Msa0116770:intron 45.0%
AATTGAGCAGGAATTGCCTC+TGG + chr1_3:35982980-35982999 None:intergenic 45.0%
AGCTTAAGGCTGAGGAAAAG+TGG + chr1_3:35983027-35983046 None:intergenic 45.0%
! GTTTCTTGTTTGACGGGTGT+CGG + chr1_3:35983190-35983209 None:intergenic 45.0%
!! GATGTTGGTGGTTTGGAGAA+GGG + chr1_3:35983342-35983361 None:intergenic 45.0%
!! TGATGTTGGTGGTTTGGAGA+AGG + chr1_3:35983343-35983362 None:intergenic 45.0%
TTTGGATGGGCCATTATCGA+AGG + chr1_3:35983402-35983421 None:intergenic 45.0%
AAGATTCCAACCAGTAGTGC+CGG - chr1_3:35983640-35983659 Msa0116770:intron 45.0%
ACTGTAAGGAATGCTAGAGG+GGG + chr1_3:35983699-35983718 None:intergenic 45.0%
TGCATCCTCACTTGTAGACA+TGG - chr1_3:35983754-35983773 Msa0116770:intron 45.0%
CCAACAATGTGAAGAGGAAG+CGG + chr1_3:35983930-35983949 None:intergenic 45.0%
CAAGATTAGAACGAGGATCG+AGG + chr1_3:35984000-35984019 None:intergenic 45.0%
!! AGAATGGGTTGGAGACAACA+AGG + chr1_3:35984130-35984149 None:intergenic 45.0%
!!! CCCAACTTTTGGGATAAGAG+TGG - chr1_3:35984463-35984482 Msa0116770:intron 45.0%
!!! CTTTTGGGATAAGAGTGGAG+TGG - chr1_3:35984468-35984487 Msa0116770:intron 45.0%
CCCCACAAAATAGGCTTGTA+AGG + chr1_3:35984614-35984633 None:intergenic 45.0%
GTAACACGACCCCACAAAAT+AGG + chr1_3:35984623-35984642 None:intergenic 45.0%
GCTATCAGGTTTCTGCTATC+AGG - chr1_3:35984665-35984684 Msa0116770:intron 45.0%
GTGTGTTAAGAGTCCCACAT+TGG - chr1_3:35984724-35984743 Msa0116770:intron 45.0%
GCAATTGTCACCTTCCAAAC+CGG - chr1_3:35984783-35984802 Msa0116770:intron 45.0%
!! CACCTTCCAAACCGGTTTTA+TGG - chr1_3:35984791-35984810 Msa0116770:intron 45.0%
!! CCTTCCAAACCGGTTTTATG+GGG - chr1_3:35984793-35984812 Msa0116770:intron 45.0%
GAGTTCCAGGAAATGTCACA+AGG - chr1_3:35985461-35985480 Msa0116770:intron 45.0%
GTCCGTAATCTAGTGTACCA+AGG - chr1_3:35985731-35985750 Msa0116770:intron 45.0%
ATGTTGTGTACCAAGGTCGA+AGG - chr1_3:35985765-35985784 Msa0116770:CDS 45.0%
ATTCTCTTTGTCTCTGCCCA+AGG - chr1_3:35985848-35985867 Msa0116770:CDS 45.0%
AAGATCTGCATGGTTGCCTT+GGG + chr1_3:35985867-35985886 None:intergenic 45.0%
GGGCCATTAGTCCATTACTT+AGG - chr1_3:35986009-35986028 Msa0116770:intron 45.0%
!! GGGCCTAAGTAATGGACTAA+TGG + chr1_3:35986015-35986034 None:intergenic 45.0%
! AACCTAGTGGGCCTAAGTAA+TGG + chr1_3:35986023-35986042 None:intergenic 45.0%
AACGGCTGCATAGATTCCAT+CGG + chr1_3:35986343-35986362 None:intergenic 45.0%
! ACTTTTCGGATGATGACTGG+CGG + chr1_3:35986384-35986403 None:intergenic 45.0%
AGGTTGCGATCACCAAATCA+AGG + chr1_3:35986507-35986526 None:intergenic 45.0%
AAATCGGGAGATTCCTCTAC+TGG + chr1_3:35986593-35986612 None:intergenic 45.0%
! TGAAGCTGAAACTTTCGGGT+TGG + chr1_3:35986618-35986637 None:intergenic 45.0%
AGTTGTATGCAGAACCGGTA+GGG + chr1_3:35986772-35986791 None:intergenic 45.0%
AGCACAGTTGTATGCAGAAC+CGG + chr1_3:35986777-35986796 None:intergenic 45.0%
GCACAATGTATACGAACACC+AGG + chr1_3:35986932-35986951 None:intergenic 45.0%
GTGGTTGAATAACAGCTGGA+TGG + chr1_3:35987000-35987019 None:intergenic 45.0%
GAGGATTTCAAAGATGGCTG+CGG + chr1_3:35987059-35987078 None:intergenic 45.0%
!! CAGCCATCTTTGAAATCCTC+TGG - chr1_3:35987059-35987078 Msa0116770:intron 45.0%
GCCTTTGCTACAATCATCTC+TGG - chr1_3:35987093-35987112 Msa0116770:intron 45.0%
GCCAGAGATGATTGTAGCAA+AGG + chr1_3:35987097-35987116 None:intergenic 45.0%
TCTCTAACACTCCCAACATG+TGG + chr1_3:35987167-35987186 None:intergenic 45.0%
!! ACATGTTGGGAGTGTTAGAG+AGG - chr1_3:35987166-35987185 Msa0116770:intron 45.0%
! TGATGGTGAAGTCAAGTCTG+AGG - chr1_3:35987424-35987443 Msa0116770:intron 45.0%
! GTGGTGCTGAGGTATTTATC+TGG - chr1_3:35987501-35987520 Msa0116770:intron 45.0%
!! GGTATTTATCTGGTTTGGCC+GGG - chr1_3:35987511-35987530 Msa0116770:intron 45.0%
!! GTATTTATCTGGTTTGGCCG+GGG - chr1_3:35987512-35987531 Msa0116770:intron 45.0%
TTTGGCCAGAAACAAACTCC+TGG + chr1_3:35987654-35987673 None:intergenic 45.0%
ACAGTACTAGCAGATCCTGA+TGG + chr1_3:35987757-35987776 None:intergenic 45.0%
GGAAAAGGGAAAGTTACAGG+TGG - chr1_3:35987787-35987806 Msa0116770:intron 45.0%
TCAGCATTGCTGAAGCAACA+AGG - chr1_3:35987880-35987899 Msa0116770:intron 45.0%
CAGCATTGCTGAAGCAACAA+GGG - chr1_3:35987881-35987900 Msa0116770:intron 45.0%
ATTGCTGAAGCAACAAGGGA+TGG - chr1_3:35987885-35987904 Msa0116770:intron 45.0%
TTGCTGAAGCAACAAGGGAT+GGG - chr1_3:35987886-35987905 Msa0116770:intron 45.0%
CAACAAGGGATGGGTGTAAA+AGG - chr1_3:35987895-35987914 Msa0116770:intron 45.0%
CCACCTTCTTCAAGCAAATG+TGG + chr1_3:35987955-35987974 None:intergenic 45.0%
CCACATTTGCTTGAAGAAGG+TGG - chr1_3:35987952-35987971 Msa0116770:intron 45.0%
GCTTGAAGAAGGTGGAAAGA+TGG - chr1_3:35987960-35987979 Msa0116770:CDS 45.0%
TGAAGAAGGTGGAAAGATGG+AGG - chr1_3:35987963-35987982 Msa0116770:CDS 45.0%
CAAGACCTCATTACTGAACG+AGG - chr1_3:35988092-35988111 Msa0116770:intron 45.0%
ACACATACCATTCTGGTGAG+AGG - chr1_3:35988157-35988176 Msa0116770:intron 45.0%
CTTCTTTCCTCTCACCAGAA+TGG + chr1_3:35988167-35988186 None:intergenic 45.0%
AAGACTACTTCTTGTGCTGC+TGG - chr1_3:35988184-35988203 Msa0116770:intron 45.0%
! TACTTCTTGTGCTGCTGGTT+TGG - chr1_3:35988189-35988208 Msa0116770:intron 45.0%
CAACAGAATGGTGACAAGAC+AGG + chr1_3:35989195-35989214 None:intergenic 45.0%
TTGACGGTGAACATTGACAG+TGG + chr1_3:35989255-35989274 None:intergenic 45.0%
TTAGAGACCGATATGGGACA+AGG + chr1_3:35989440-35989459 None:intergenic 45.0%
TGTCCCATATCGGTCTCTAA+TGG - chr1_3:35989440-35989459 Msa0116770:intron 45.0%
CCAACCGAATAGCCATTGTT+TGG + chr1_3:35990141-35990160 None:intergenic 45.0%
CCAAACAATGGCTATTCGGT+TGG - chr1_3:35990138-35990157 Msa0116770:intron 45.0%
AGGTCTACCCTTCAAAGAGT+TGG + chr1_3:35990176-35990195 None:intergenic 45.0%
TTTGAAGGGTAGACCTGTTC+AGG - chr1_3:35990180-35990199 Msa0116770:intron 45.0%
!! TTTTCAGGGTCGCATATACG+AGG - chr1_3:35990266-35990285 Msa0116770:intron 45.0%
TTTCAGGGTCGCATATACGA+GGG - chr1_3:35990267-35990286 Msa0116770:intron 45.0%
!! TACTTGTCCCCATTTTAGGG+AGG - chr1_3:35990405-35990424 Msa0116770:intron 45.0%
GCTCAAACCTCCCTAAAATG+GGG + chr1_3:35990415-35990434 None:intergenic 45.0%
GTGCTCAAACCTCCCTAAAA+TGG + chr1_3:35990417-35990436 None:intergenic 45.0%
!! TTTTAGGGAGGTTTGAGCAC+TGG - chr1_3:35990417-35990436 Msa0116770:intron 45.0%
! AGTGATTCGGATAAGCGCAA+CGG + chr1_3:35990499-35990518 None:intergenic 45.0%
GGATGGAAGTTCCAGTGATT+CGG + chr1_3:35990512-35990531 None:intergenic 45.0%
CAGAATGTCCACAACATGGA+GGG + chr1_3:35990802-35990821 None:intergenic 45.0%
TTGGCAGAATGTCCACAACA+TGG + chr1_3:35990806-35990825 None:intergenic 45.0%
! GAGTGCCTAGAGAGATTTTG+TGG - chr1_3:35991352-35991371 Msa0116770:intron 45.0%
! AGAGATTTTGTGGAAAGCCC+TGG - chr1_3:35991362-35991381 Msa0116770:intron 45.0%
! GCAGATGATGTAGTCTTGCT+TGG - chr1_3:35991485-35991504 Msa0116770:intron 45.0%
ACTTCAGCAAACGGAGAAGT+AGG - chr1_3:35991612-35991631 Msa0116770:intron 45.0%
ATCTCCAACTTTCACCTCCA+GGG + chr1_3:35991642-35991661 None:intergenic 45.0%
GTATCATACCCCAAGTTACG+CGG - chr1_3:35991663-35991682 Msa0116770:intron 45.0%
GTAAGCCATCGTATTCAAGC+TGG - chr1_3:35991737-35991756 Msa0116770:intron 45.0%
TTCAAGCTGGGTGGTTGAAA+TGG - chr1_3:35991750-35991769 Msa0116770:intron 45.0%
TGACACCATTAGAGAGAGTG+GGG - chr1_3:35991970-35991989 Msa0116770:intron 45.0%
TCTTCTTACGACGGCATCTA+CGG + chr1_3:35992063-35992082 None:intergenic 45.0%
GAGGAGAGTCATGTTAGAAG+AGG - chr1_3:35992095-35992114 Msa0116770:intron 45.0%
CTTATCCCACTAAGTAGGGT+CGG + chr1_3:35992237-35992256 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+AGG + chr1_3:35992242-35992261 None:intergenic 45.0%
CTACTTAGTGGGATAAGGCT+TGG - chr1_3:35992240-35992259 Msa0116770:intron 45.0%
GGCACTTGAGCTTAACCAAA+AGG + chr1_3:35992353-35992372 None:intergenic 45.0%
!! GCATGCTTTAAAGCAACTCC+TGG + chr1_3:35992503-35992522 None:intergenic 45.0%
GTACAGAAAGCTCAGCTTTC+TGG - chr1_3:35992531-35992550 Msa0116770:intron 45.0%
!! TCAGCTTTCTGGCTTGCATT+AGG - chr1_3:35992542-35992561 Msa0116770:intron 45.0%
!! CACACGCAGAAGTGTTTGTT+TGG - chr1_3:35992975-35992994 Msa0116770:intron 45.0%
GATATGGCTGCATCTTTGGA+AGG - chr1_3:35993142-35993161 Msa0116770:intron 45.0%
! AGTGGGATTTTGAACAGCCA+TGG + chr1_3:35993417-35993436 None:intergenic 45.0%
!!! GAGGTTCATGCTTTTGGAAC+AGG - chr1_3:35993534-35993553 Msa0116770:CDS 45.0%
AGAGTAGAGACACCTGTTTC+TGG + chr1_3:35993625-35993644 None:intergenic 45.0%
!! GTGTCTCTACTCTTTGGGAT+TGG - chr1_3:35993632-35993651 Msa0116770:intron 45.0%
! CAGTTGTTGTGGCTTGTAAC+AGG + chr1_3:35993936-35993955 None:intergenic 45.0%
!! ACGCTTTTTAACCTCGAGAG+GGG - chr1_3:35994097-35994116 Msa0116770:CDS 45.0%
GCGATTGAATGTGAAGTGAC+AGG + chr1_3:35994267-35994286 None:intergenic 45.0%
AGCTAGATAAGAGCCTGCTA+CGG - chr1_3:35994292-35994311 Msa0116770:intron 45.0%
ACTATTGAGGATCGTGGTGA+TGG - chr1_3:35994346-35994365 Msa0116770:intron 45.0%
TATCTGATACTTGCAGTGCC+TGG - chr1_3:35994374-35994393 Msa0116770:intron 45.0%
!! GAATTGCTCTTGCTGTTTCC+AGG + chr1_3:35994395-35994414 None:intergenic 45.0%
TGGACTATCTCGGGGTAATT+TGG + chr1_3:35994518-35994537 None:intergenic 45.0%
GTTTGTGTTGGACTATCTCG+GGG + chr1_3:35994526-35994545 None:intergenic 45.0%
ATGTCTCGACCTGCTAAACA+AGG - chr1_3:35995122-35995141 Msa0116770:intron 45.0%
! GCTCAATTGATTCTGGTGAC+AGG - chr1_3:35995144-35995163 Msa0116770:intron 45.0%
AAATCAAACGGGTCAAGTGG+AGG - chr1_3:35995169-35995188 Msa0116770:intron 45.0%
AATCAAACGGGTCAAGTGGA+GGG - chr1_3:35995170-35995189 Msa0116770:intron 45.0%
AAAGCTTCTGCCCTTTGTCT+TGG + chr1_3:35995199-35995218 None:intergenic 45.0%
AAGACAAAGGGCAGAAGCTT+TGG - chr1_3:35995198-35995217 Msa0116770:intron 45.0%
!! CTGGTTCTATCTGTGGGATT+TGG - chr1_3:35995388-35995407 Msa0116770:intron 45.0%
GAATGGCTTAGAAGGCAGAA+TGG + chr1_3:35995426-35995445 None:intergenic 45.0%
GAGGTTGTGAATGGCTTAGA+AGG + chr1_3:35995434-35995453 None:intergenic 45.0%
CAAAGAGGAGAGGTTGTGAA+TGG + chr1_3:35995443-35995462 None:intergenic 45.0%
TTCACAACCTCTCCTCTTTG+TGG - chr1_3:35995443-35995462 Msa0116770:intron 45.0%
GATTGATCCACAAAGAGGAG+AGG + chr1_3:35995453-35995472 None:intergenic 45.0%
AAAGCTTCCGCTCTTTGTCT+TGG + chr1_3:35995683-35995702 None:intergenic 45.0%
ACTCCTAGGCCATCTGTAAA+AGG - chr1_3:35995752-35995771 Msa0116770:intron 45.0%
! TGACCTTTTACAGATGGCCT+AGG + chr1_3:35995758-35995777 None:intergenic 45.0%
AGGCCATCTGTAAAAGGTCA+AGG - chr1_3:35995758-35995777 Msa0116770:intron 45.0%
!! GAAATGCTACTCTCTGGAAC+AGG + chr1_3:35995881-35995900 None:intergenic 45.0%
GTTCCAGAGAGTAGCATTTC+AGG - chr1_3:35995881-35995900 Msa0116770:intron 45.0%
AGAAGACGTAGCAGTAGACA+TGG + chr1_3:35996171-35996190 None:intergenic 45.0%
!! CGACTTGTTGCTTCCATTGA+AGG + chr1_3:35996283-35996302 None:intergenic 45.0%
CAATGGAAGCAACAAGTCGA+AGG - chr1_3:35996284-35996303 Msa0116770:intron 45.0%
GATTTCACCTGAGATTCCAC+CGG - chr1_3:35996340-35996359 Msa0116770:intron 45.0%
AGATAAACCGGTGGAATCTC+AGG + chr1_3:35996350-35996369 None:intergenic 45.0%
GCTGCATCTGTGAGATAAAC+CGG + chr1_3:35996362-35996381 None:intergenic 45.0%
TCTTCCCATTCAGTGTAAGC+AGG + chr1_3:35996407-35996426 None:intergenic 45.0%
AAGATTCATTGCTCTGCACC+TGG - chr1_3:35996429-35996448 Msa0116770:intron 45.0%
AGTGCGTGAACCTTTCGTAA+TGG + chr1_3:35996594-35996613 None:intergenic 45.0%
!! CGTTTTGGTGGAAGATTCAG+AGG - chr1_3:35997013-35997032 Msa0116770:intron 45.0%
AGAAACTGTCCAGAATGCTG+AGG + chr1_3:35997220-35997239 None:intergenic 45.0%
TGGATCTGAGCCAGTTAAGA+AGG + chr1_3:35997290-35997309 None:intergenic 45.0%
AAAGAGACGTGGAATCCATG+AGG + chr1_3:35997384-35997403 None:intergenic 45.0%
ATGGATTCCACGTCTCTTTC+AGG - chr1_3:35997385-35997404 Msa0116770:intron 45.0%
ATCAGAACCTGAAAGAGACG+TGG + chr1_3:35997395-35997414 None:intergenic 45.0%
!! GTCTCTTTCAGGTTCTGATC+AGG - chr1_3:35997396-35997415 Msa0116770:intron 45.0%
! GGTTCTGATCAGGTCCATAT+TGG - chr1_3:35997406-35997425 Msa0116770:intron 45.0%
! AGCAGTGGTCTTGAATGAGT+TGG + chr1_3:35997695-35997714 None:intergenic 45.0%
!! ATTTTGAGAGACAGGAGCAG+TGG + chr1_3:35997710-35997729 None:intergenic 45.0%
TGCCAGATACCATACATGGA+AGG + chr1_3:35997892-35997911 None:intergenic 45.0%
GCTATGCCAGATACCATACA+TGG + chr1_3:35997896-35997915 None:intergenic 45.0%
ACTTGGACATCCTCATCATG+AGG - chr1_3:35997918-35997937 Msa0116770:intron 45.0%
TATCCACAGGAGGATTCAAC+TGG + chr1_3:35998114-35998133 None:intergenic 45.0%
TGAATCTGTGAGTGATGCCA+AGG + chr1_3:35998329-35998348 None:intergenic 45.0%
!!! CCATTTTGATGGTGAGTGTG+TGG + chr1_3:35998357-35998376 None:intergenic 45.0%
CCACACACTCACCATCAAAA+TGG - chr1_3:35998354-35998373 Msa0116770:intron 45.0%
AAGGTTGTTGAGACAGGAGT+GGG + chr1_3:35998833-35998852 None:intergenic 45.0%
AAAGGTTGTTGAGACAGGAG+TGG + chr1_3:35998834-35998853 None:intergenic 45.0%
!! GTCTGAGGGGTGTTTGATAT+GGG + chr1_3:35998911-35998930 None:intergenic 45.0%
!! AGTCTGAGGGGTGTTTGATA+TGG + chr1_3:35998912-35998931 None:intergenic 45.0%
!! GATAGAATGGTGATGGGTGT+GGG + chr1_3:35998992-35999011 None:intergenic 45.0%
!! AGATAGAATGGTGATGGGTG+TGG + chr1_3:35998993-35999012 None:intergenic 45.0%
GAGGGAGATAGAATGGTGAT+GGG + chr1_3:35998998-35999017 None:intergenic 45.0%
AGAGGGAGATAGAATGGTGA+TGG + chr1_3:35998999-35999018 None:intergenic 45.0%
AGATGGAGAGGGAGATAGAA+TGG + chr1_3:35999005-35999024 None:intergenic 45.0%
GTAACACTAGCAGATGACTC+AGG + chr1_3:35999040-35999059 None:intergenic 45.0%
TGAATTCTGTGAGGAACAGG+AGG + chr1_3:35999094-35999113 None:intergenic 45.0%
GGATGAATTCTGTGAGGAAC+AGG + chr1_3:35999097-35999116 None:intergenic 45.0%
CTCTCGTTCTCATTGAGTGA+AGG + chr1_3:35999126-35999145 None:intergenic 45.0%
CTTCACTCAATGAGAACGAG+AGG - chr1_3:35999124-35999143 Msa0116770:intron 45.0%
TGGGCTCAACATGAGTCAAA+AGG + chr1_3:35999189-35999208 None:intergenic 45.0%
CAAGTACAAGGCACGTTTAG+TGG - chr1_3:35999381-35999400 Msa0116770:intron 45.0%
AAGGCACGTTTAGTGGCTAA+GGG - chr1_3:35999388-35999407 Msa0116770:intron 45.0%
!! TGTAACGGGTTTGACTACCA+GGG + chr1_3:35999456-35999475 None:intergenic 45.0%
TAGTCAAACCCGTTACAGTG+AGG - chr1_3:35999459-35999478 Msa0116770:intron 45.0%
AGAACTGTCCTCACTGTAAC+GGG + chr1_3:35999470-35999489 None:intergenic 45.0%
CAGAACTGTCCTCACTGTAA+CGG + chr1_3:35999471-35999490 None:intergenic 45.0%
TCAGAAGATTCAAAGCCAGG+AGG + chr1_3:35999590-35999609 None:intergenic 45.0%
TAAAACAAGCTCCCAGAGCA+TGG - chr1_3:35999651-35999670 Msa0116770:intron 45.0%
CAATCTCTCAAACCATGCTC+TGG + chr1_3:35999666-35999685 None:intergenic 45.0%
GAGAGAAGTAAAGAGCCAGA+TGG + chr1_3:35999920-35999939 None:intergenic 45.0%
TAATAGCATGCCCTCACCAA+TGG - chr1_3:35999991-36000010 Msa0116770:intron 45.0%
GTACTAGATGCCATTGGTGA+GGG + chr1_3:36000004-36000023 None:intergenic 45.0%
TGTACTAGATGCCATTGGTG+AGG + chr1_3:36000005-36000024 None:intergenic 45.0%
CAAATCCCCTTGAAGATCAC+TGG - chr1_3:36000158-36000177 Msa0116770:intron 45.0%
TGCCTTCCAGTGATCTTCAA+GGG + chr1_3:36000167-36000186 None:intergenic 45.0%
! CTGCAGGGTACTTTAAACCA+TGG - chr1_3:36000208-36000227 Msa0116770:intron 45.0%
CAGGTGTAAGCATTAACCCA+TGG + chr1_3:36000228-36000247 None:intergenic 45.0%
!! TGGCTTTTGTGATGCTGACT+GGG - chr1_3:36000276-36000295 Msa0116770:CDS 45.0%
! TCCTGATGACAGAAGCACAT+CGG - chr1_3:36000306-36000325 Msa0116770:five_prime_UTR 45.0%
ATTGGGACCCAGAAATATGC+AGG + chr1_3:36000335-36000354 None:intergenic 45.0%
! TCCCAATCTAGTTTCCTGGT+GGG - chr1_3:36000348-36000367 Msa0116770:intron 45.0%
CTGCACTAGATCTAGCTACA+AGG + chr1_3:36000387-36000406 None:intergenic 45.0%
TGTAGCTAGATCTAGTGCAG+AGG - chr1_3:36000387-36000406 Msa0116770:intron 45.0%
! CGTAGTGCTATTCAGTCACA+CGG - chr1_3:36001252-36001271 Msa0116770:intron 45.0%
!! AAAAGGCACTCAATAGGCCA+GGG + chr1_3:36001444-36001463 None:intergenic 45.0%
! AGGCTTTTACTTCCACCTAG+AGG - chr1_3:36001508-36001527 Msa0116770:intron 45.0%
CCTATGAAGATTCCTCTAGG+TGG + chr1_3:36001523-36001542 None:intergenic 45.0%
CCACCTAGAGGAATCTTCAT+AGG - chr1_3:36001520-36001539 Msa0116770:intron 45.0%
TGGTTGTGTAAACACGAGTC+AGG + chr1_3:36001573-36001592 None:intergenic 45.0%
TAAGCCGAAACACCCAGAAA+TGG + chr1_3:36001593-36001612 None:intergenic 45.0%
TCTGCAGCAAAAACACCAAC+TGG + chr1_3:36001621-36001640 None:intergenic 45.0%
TGATGAAGCTACAGAAGCCA+AGG - chr1_3:36001671-36001690 Msa0116770:intron 45.0%
TCTCCTGATTCCGATAGCAA+TGG - chr1_3:36001708-36001727 Msa0116770:intron 45.0%
CTCCTGATTCCGATAGCAAT+GGG - chr1_3:36001709-36001728 Msa0116770:intron 45.0%
TCCTGATTCCGATAGCAATG+GGG - chr1_3:36001710-36001729 Msa0116770:intron 45.0%
TCAGGGGCAGGAAAATTCAT+GGG + chr1_3:36001903-36001922 None:intergenic 45.0%
GCATAATCTCCACTTCCTGT+TGG - chr1_3:36002037-36002056 Msa0116770:intron 45.0%
! TGTTGGTAGGCCTAAAGCAA+GGG + chr1_3:36002405-36002424 None:intergenic 45.0%
! ATGTTGGTAGGCCTAAAGCA+AGG + chr1_3:36002406-36002425 None:intergenic 45.0%
GAAGACACTAGAAACTGGAC+GGG - chr1_3:36002564-36002583 Msa0116770:intron 45.0%
!! ATCACTCACGCTGATTTGAC+TGG - chr1_3:36002896-36002915 Msa0116770:five_prime_UTR 45.0%
TTTCTGTATGCATGGTGTGG+TGG + chr1_3:36003053-36003072 None:intergenic 45.0%
!!! TTAATTATAATTTTTTTTTC+TGG - chr1_3:35981426-35981445 Msa0116770:intron 5.0%
!!! TAATAATAATAATTTGTATT+CGG - chr1_3:35985244-35985263 Msa0116770:intron 5.0%
!! AAATAATATGATAATTAATA+AGG + chr1_3:35990918-35990937 None:intergenic 5.0%
!!! TAAATTGTATTTATTTTTAT+TGG - chr1_3:35990937-35990956 Msa0116770:CDS 5.0%
!! AAAAAAAAAAAAAAATACAA+TGG - chr1_3:36000993-36001012 Msa0116770:intron 5.0%
!! AAAAAAAAAAAAAATACAAT+GGG - chr1_3:36000994-36001013 Msa0116770:intron 5.0%
!! AATAAAAAATAATTTAATGT+TGG + chr1_3:36002422-36002441 None:intergenic 5.0%
!!! TAAAGTAAATTTTTATATAT+GGG + chr1_3:36002488-36002507 None:intergenic 5.0%
!!! TTAAAGTAAATTTTTATATA+TGG + chr1_3:36002489-36002508 None:intergenic 5.0%
TGTGGCATCCTCTAGTCTCT+TGG - chr1_3:35979109-35979128 Msa0116770:three_prime_UTR 50.0%
ACACGGTACCAAGAGACTAG+AGG + chr1_3:35979120-35979139 None:intergenic 50.0%
CACACACACACACACACACA+CGG + chr1_3:35979137-35979156 None:intergenic 50.0%
AAGGGCCTGTTTGGGAGTTT+AGG - chr1_3:35979386-35979405 Msa0116770:three_prime_UTR 50.0%
GCCTGTTTGGGAGTTTAGGA+GGG - chr1_3:35979390-35979409 Msa0116770:three_prime_UTR 50.0%
CCTGTTTGGGAGTTTAGGAG+GGG - chr1_3:35979391-35979410 Msa0116770:three_prime_UTR 50.0%
TTTGGGAGTTTAGGAGGGGA+TGG - chr1_3:35979395-35979414 Msa0116770:three_prime_UTR 50.0%
GCTTCCTTGCCTGCATTTCT+TGG - chr1_3:35979717-35979736 Msa0116770:intron 50.0%
AAAACAGTTAACCCGGCTCC+TGG - chr1_3:35980561-35980580 Msa0116770:intron 50.0%
! TGGGAAATACTTGCTGCTGC+CGG - chr1_3:35980635-35980654 Msa0116770:intron 50.0%
TTAGGTGTAGAGAACAGCCC+CGG + chr1_3:35980657-35980676 None:intergenic 50.0%
!!! GGTTTTGGATCCTGCATTCC+AGG - chr1_3:35980881-35980900 Msa0116770:intron 50.0%
CACTCCAACTACTGTAGCAG+AGG + chr1_3:35981678-35981697 None:intergenic 50.0%
TGAGTCCGTGGTAGGAAAAG+GGG + chr1_3:35981727-35981746 None:intergenic 50.0%
GTGAGTCCGTGGTAGGAAAA+GGG + chr1_3:35981728-35981747 None:intergenic 50.0%
AGTGAGTCCGTGGTAGGAAA+AGG + chr1_3:35981729-35981748 None:intergenic 50.0%
GGGGATAGTTTCAGTTGGCA+TGG - chr1_3:35981871-35981890 Msa0116770:intron 50.0%
GGATACGAGTCAGGTAAGCT+TGG - chr1_3:35982082-35982101 Msa0116770:intron 50.0%
GCATTCTTGTAGGATGAGGC+AGG - chr1_3:35982283-35982302 Msa0116770:intron 50.0%
GAACTTGATGCTGCTCTTGG+AGG - chr1_3:35982328-35982347 Msa0116770:intron 50.0%
TTGATGCTGCTCTTGGAGGA+CGG - chr1_3:35982332-35982351 Msa0116770:intron 50.0%
GTGCAGCACAGAGAGATTCA+AGG - chr1_3:35982358-35982377 Msa0116770:intron 50.0%
GATGCAACACCCCTCTCTAA+TGG + chr1_3:35982430-35982449 None:intergenic 50.0%
!! TTAGAGAGGGGTGTTGCATC+TGG - chr1_3:35982430-35982449 Msa0116770:intron 50.0%
TCAGGAAAGAGCCAAGGCTT+TGG - chr1_3:35982696-35982715 Msa0116770:intron 50.0%
!! AAGAGCCAAGGCTTTGGAAG+TGG - chr1_3:35982702-35982721 Msa0116770:intron 50.0%
CTGTACCACTTCCAAAGCCT+TGG + chr1_3:35982710-35982729 None:intergenic 50.0%
CTAGCCTCTTGCATACACAG+AGG - chr1_3:35983478-35983497 Msa0116770:intron 50.0%
AGGACCTCTGTGTATGCAAG+AGG + chr1_3:35983485-35983504 None:intergenic 50.0%
AATGGTCTCCAAGGAAGGTC+CGG + chr1_3:35983662-35983681 None:intergenic 50.0%
ATGTCAGCCAATGGTCTCCA+AGG + chr1_3:35983671-35983690 None:intergenic 50.0%
CCGCTTCCTCTTCACATTGT+TGG - chr1_3:35983927-35983946 Msa0116770:intron 50.0%
AGGTTTCTGCTATCAGGCCA+CGG - chr1_3:35984671-35984690 Msa0116770:intron 50.0%
! ATGTCCAGTCTAAGGTGCGA+GGG - chr1_3:35984699-35984718 Msa0116770:intron 50.0%
!! CCCCATAAAACCGGTTTGGA+AGG + chr1_3:35984796-35984815 None:intergenic 50.0%
ACAGCCCCATAAAACCGGTT+TGG + chr1_3:35984800-35984819 None:intergenic 50.0%
! GATGGGTTCCCTAGGCATTT+AGG - chr1_3:35985048-35985067 Msa0116770:intron 50.0%
! AACCTAGTGGGCCTGACTAA+TGG + chr1_3:35985279-35985298 None:intergenic 50.0%
TAGAGCTGAAGCTGAGTTCC+AGG - chr1_3:35985448-35985467 Msa0116770:intron 50.0%
GAAGATCTGCATGGTTGCCT+TGG + chr1_3:35985868-35985887 None:intergenic 50.0%
GTCCATTACTTAGGCCCACT+AGG - chr1_3:35986018-35986037 Msa0116770:intron 50.0%
GTGGTGAGTGTGGTCTGTAT+TGG - chr1_3:35986265-35986284 Msa0116770:intron 50.0%
CAAGGCACACTTGTTTGTGG+TGG + chr1_3:35986489-35986508 None:intergenic 50.0%
!! TGGTGTTGGTGGTTTGGCAT+AGG + chr1_3:35986573-35986592 None:intergenic 50.0%
!! CTCTACTGGTGTTGGTGGTT+TGG + chr1_3:35986579-35986598 None:intergenic 50.0%
CAAACCACCAACACCAGTAG+AGG - chr1_3:35986577-35986596 Msa0116770:intron 50.0%
! GATTCCTCTACTGGTGTTGG+TGG + chr1_3:35986584-35986603 None:intergenic 50.0%
GGAGATTCCTCTACTGGTGT+TGG + chr1_3:35986587-35986606 None:intergenic 50.0%
GCTTCATCAGACCTGTGATG+TGG - chr1_3:35986632-35986651 Msa0116770:intron 50.0%
TCTGCAACAGGGGACTTCTA+TGG - chr1_3:35986718-35986737 Msa0116770:intron 50.0%
TTGTATGCAGAACCGGTAGG+GGG + chr1_3:35986770-35986789 None:intergenic 50.0%
GTTGTATGCAGAACCGGTAG+GGG + chr1_3:35986771-35986790 None:intergenic 50.0%
CAGTTGTATGCAGAACCGGT+AGG + chr1_3:35986773-35986792 None:intergenic 50.0%
!! GCAAACAGACATTTCTGGCG+CGG - chr1_3:35986832-35986851 Msa0116770:intron 50.0%
TCTCACAGGAGAAGGAACAG+TGG + chr1_3:35987019-35987038 None:intergenic 50.0%
GGCATAGATCTCACAGGAGA+AGG + chr1_3:35987027-35987046 None:intergenic 50.0%
TTGTCGGGCATAGATCTCAC+AGG + chr1_3:35987033-35987052 None:intergenic 50.0%
GATTTCAAAGATGGCTGCGG+TGG + chr1_3:35987056-35987075 None:intergenic 50.0%
! AAGGCAATTTGGCTAGCCAG+AGG + chr1_3:35987078-35987097 None:intergenic 50.0%
GGTGAAGTCAAGTCTGAGGA+AGG - chr1_3:35987428-35987447 Msa0116770:intron 50.0%
GTTCTTCCACTTGTGTTCCC+CGG + chr1_3:35987532-35987551 None:intergenic 50.0%
ATCTGCTAGTACTGTTGCCG+AGG - chr1_3:35987762-35987781 Msa0116770:intron 50.0%
ACTGTTGCCGAGGATGGAAA+AGG - chr1_3:35987772-35987791 Msa0116770:intron 50.0%
CTGTTGCCGAGGATGGAAAA+GGG - chr1_3:35987773-35987792 Msa0116770:intron 50.0%
! CATAGCAGTTGCGTTGATGG+TGG + chr1_3:35989291-35989310 None:intergenic 50.0%
TTATGCTCCAGGTTGTTCGC+TGG - chr1_3:35989342-35989361 Msa0116770:intron 50.0%
! TGTTGCTCTTTTCCACCCCA+TGG - chr1_3:35990308-35990327 Msa0116770:intron 50.0%
CCTTAAGAACTACCATGGGG+TGG + chr1_3:35990323-35990342 None:intergenic 50.0%
CCACCCCATGGTAGTTCTTA+AGG - chr1_3:35990320-35990339 Msa0116770:intron 50.0%
GTTGCGCTTATCCGAATCAC+TGG - chr1_3:35990498-35990517 Msa0116770:intron 50.0%
! CGGGCTCTACAGTTTTCACT+TGG - chr1_3:35990701-35990720 Msa0116770:intron 50.0%
GTTCTGTTCCCTCCATGTTG+TGG - chr1_3:35990791-35990810 Msa0116770:intron 50.0%
GCAGAATGTCCACAACATGG+AGG + chr1_3:35990803-35990822 None:intergenic 50.0%
TATGCCTGGGAAGTCGACTA+TGG - chr1_3:35991233-35991252 Msa0116770:intron 50.0%
CTACTTACTTCGACGCGTGA+TGG - chr1_3:35991263-35991282 Msa0116770:intron 50.0%
TGGAAAGCCCTGGAGAAGAA+AGG - chr1_3:35991372-35991391 Msa0116770:intron 50.0%
GGAAAGCCCTGGAGAAGAAA+GGG - chr1_3:35991373-35991392 Msa0116770:intron 50.0%
GAAAGCCCTGGAGAAGAAAG+GGG - chr1_3:35991374-35991393 Msa0116770:intron 50.0%
CCTAACCCCTTTCTTCTCCA+GGG + chr1_3:35991382-35991401 None:intergenic 50.0%
TCCTAACCCCTTTCTTCTCC+AGG + chr1_3:35991383-35991402 None:intergenic 50.0%
GCGGAAACCATACGCTTCTA+GGG + chr1_3:35991558-35991577 None:intergenic 50.0%
AGCGGAAACCATACGCTTCT+AGG + chr1_3:35991559-35991578 None:intergenic 50.0%
CCGTCTTGCTTCTACTCAAG+CGG + chr1_3:35991577-35991596 None:intergenic 50.0%
CCGCTTGAGTAGAAGCAAGA+CGG - chr1_3:35991574-35991593 Msa0116770:intron 50.0%
TCTACCCTGGAGGTGAAAGT+TGG - chr1_3:35991635-35991654 Msa0116770:intron 50.0%
GATCTCCAACTTTCACCTCC+AGG + chr1_3:35991643-35991662 None:intergenic 50.0%
ACCACCCAGCTTGAATACGA+TGG + chr1_3:35991745-35991764 None:intergenic 50.0%
CTATCGGACAGCAGTCAAGT+CGG - chr1_3:35991832-35991851 Msa0116770:intron 50.0%
GTCAAGTCGGCGATGTTGTA+TGG - chr1_3:35991845-35991864 Msa0116770:intron 50.0%
CAGAGATGAGGATGTTGCGT+TGG - chr1_3:35991912-35991931 Msa0116770:intron 50.0%
AGGATGTTGCGTTGGATGAG+TGG - chr1_3:35991920-35991939 Msa0116770:intron 50.0%
GACACCATTAGAGAGAGTGG+GGG - chr1_3:35991971-35991990 Msa0116770:intron 50.0%
CTTCTTACGACGGCATCTAC+GGG + chr1_3:35992062-35992081 None:intergenic 50.0%
GAAGAGGTAGAGGAAGACCT+AGG - chr1_3:35992111-35992130 Msa0116770:intron 50.0%
ACTAAGTAGGGTCGGCTACA+TGG + chr1_3:35992229-35992248 None:intergenic 50.0%
ATGTAGCCGACCCTACTTAG+TGG - chr1_3:35992228-35992247 Msa0116770:intron 50.0%
TGTAGCCGACCCTACTTAGT+GGG - chr1_3:35992229-35992248 Msa0116770:intron 50.0%
CGACCCTACTTAGTGGGATA+AGG - chr1_3:35992235-35992254 Msa0116770:intron 50.0%
AAGCTCAAGTGCCTAACTCG+TGG - chr1_3:35992360-35992379 Msa0116770:intron 50.0%
GTCTCAGGAAACCACGAGTT+AGG + chr1_3:35992374-35992393 None:intergenic 50.0%
AAGCAACTCCTGGCTGAACA+TGG + chr1_3:35992493-35992512 None:intergenic 50.0%
!! GCTTTCTGGCTTGCATTAGG+AGG - chr1_3:35992545-35992564 Msa0116770:intron 50.0%
TCAAGTACCCCAAGTAGGAG+AGG + chr1_3:35993089-35993108 None:intergenic 50.0%
CGGGAACTCATTCCAGAAAC+AGG - chr1_3:35993610-35993629 Msa0116770:intron 50.0%
CTACTTGTCTCTACCGTAGC+AGG + chr1_3:35994308-35994327 None:intergenic 50.0%
ATCAAACGGGTCAAGTGGAG+GGG - chr1_3:35995171-35995190 Msa0116770:intron 50.0%
CTCTCTTGTGACTGCAAGAG+TGG + chr1_3:35995635-35995654 None:intergenic 50.0%
CTCTTTGTCTTGGTCCTCCA+TGG + chr1_3:35995673-35995692 None:intergenic 50.0%
TGGAGGACCAAGACAAAGAG+CGG - chr1_3:35995673-35995692 Msa0116770:intron 50.0%
CGTCAGTTCTTACTGCTGAG+AGG - chr1_3:35995813-35995832 Msa0116770:intron 50.0%
ATCACCTGATACCTCTCCTG+TGG - chr1_3:35995844-35995863 Msa0116770:intron 50.0%
GTTATGCGTTGCGCATCAGA+GGG + chr1_3:35996200-35996219 None:intergenic 50.0%
AGTTATGCGTTGCGCATCAG+AGG + chr1_3:35996201-35996220 None:intergenic 50.0%
!! CAAGTCGAAGGTGTTCTTCG+CGG - chr1_3:35996296-35996315 Msa0116770:intron 50.0%
TGTTCTTCGCGGAACGAAGA+TGG - chr1_3:35996307-35996326 Msa0116770:intron 50.0%
GCATCTGTGAGATAAACCGG+TGG + chr1_3:35996359-35996378 None:intergenic 50.0%
ACGAATCGCGAAAGTAGCGA+AGG + chr1_3:35996473-35996492 None:intergenic 50.0%
TTGGAGATCCAGTCTCTCAC+AGG - chr1_3:35996666-35996685 Msa0116770:intron 50.0%
TGGAGATCCAGTCTCTCACA+GGG - chr1_3:35996667-35996686 Msa0116770:intron 50.0%
GGAAGAAATGGCCAGTTCAG+AGG - chr1_3:35996980-35996999 Msa0116770:intron 50.0%
CATACTGTGGGGCAGAGAAA+CGG + chr1_3:35997123-35997142 None:intergenic 50.0%
ACGGTGCACCTCCAAATGTA+TGG - chr1_3:35997176-35997195 Msa0116770:intron 50.0%
ATGTCACGTCCTCAGCATTC+TGG - chr1_3:35997208-35997227 Msa0116770:intron 50.0%
GTTTCTTAGGCCTCCTACAC+AGG - chr1_3:35997234-35997253 Msa0116770:intron 50.0%
TGAGCCAGTTAAGAAGGCCT+GGG + chr1_3:35997284-35997303 None:intergenic 50.0%
GATGAGTAGCACCTGAGTCA+GGG + chr1_3:35997339-35997358 None:intergenic 50.0%
TGATGAGTAGCACCTGAGTC+AGG + chr1_3:35997340-35997359 None:intergenic 50.0%
CATGAGGTTGGATGCATCAG+GGG + chr1_3:35997368-35997387 None:intergenic 50.0%
CCATGAGGTTGGATGCATCA+GGG + chr1_3:35997369-35997388 None:intergenic 50.0%
TCCATGAGGTTGGATGCATC+AGG + chr1_3:35997370-35997389 None:intergenic 50.0%
AGACGTGGAATCCATGAGGT+TGG + chr1_3:35997380-35997399 None:intergenic 50.0%
GCAGAGTTGTCAGTTTGTGC+TGG + chr1_3:35997763-35997782 None:intergenic 50.0%
GGTATCTGGCATAGCAGACT+TGG - chr1_3:35997901-35997920 Msa0116770:intron 50.0%
!! CTTTGGAGCACCTCATGATG+AGG + chr1_3:35997931-35997950 None:intergenic 50.0%
TCTGTCCAAACTGATGGAGG+TGG - chr1_3:35998270-35998289 Msa0116770:intron 50.0%
ACTCACCACCTCCATCAGTT+TGG + chr1_3:35998278-35998297 None:intergenic 50.0%
GTGGATAAAGTGGGACCATC+TGG + chr1_3:35998803-35998822 None:intergenic 50.0%
GACAGGAGTGGGAAGAAAAG+TGG + chr1_3:35998822-35998841 None:intergenic 50.0%
!! TGGTGATGGGTGTGGGATTT+AGG + chr1_3:35998985-35999004 None:intergenic 50.0%
ACTAGCAGATGACTCAGGTG+AGG + chr1_3:35999035-35999054 None:intergenic 50.0%
ATTCTGTGAGGAACAGGAGG+AGG + chr1_3:35999091-35999110 None:intergenic 50.0%
CAGCTCTTCAGGATCCTAAG+TGG - chr1_3:35999221-35999240 Msa0116770:intron 50.0%
GCATGTCTGTTTGCAGGAAG+AGG + chr1_3:35999307-35999326 None:intergenic 50.0%
CCAATGGCATGTCTGTTTGC+AGG + chr1_3:35999313-35999332 None:intergenic 50.0%
CCTGCAAACAGACATGCCAT+TGG - chr1_3:35999310-35999329 Msa0116770:intron 50.0%
CAAGGCACGTTTAGTGGCTA+AGG - chr1_3:35999387-35999406 Msa0116770:intron 50.0%
!! GTAACGGGTTTGACTACCAG+GGG + chr1_3:35999455-35999474 None:intergenic 50.0%
!! CTGTAACGGGTTTGACTACC+AGG + chr1_3:35999457-35999476 None:intergenic 50.0%
TCCCCTTGAAGATCACTGGA+AGG - chr1_3:36000162-36000181 Msa0116770:intron 50.0%
GCCTTCCAGTGATCTTCAAG+GGG + chr1_3:36000166-36000185 None:intergenic 50.0%
CTGCCTTCCAGTGATCTTCA+AGG + chr1_3:36000168-36000187 None:intergenic 50.0%
ATCACTGGAAGGCAGTCAAG+AGG - chr1_3:36000173-36000192 Msa0116770:intron 50.0%
TGCAATAGGTTCAGTGGAGC+TGG + chr1_3:36000251-36000270 None:intergenic 50.0%
!! CTGGCTTTTGTGATGCTGAC+TGG - chr1_3:36000275-36000294 Msa0116770:CDS 50.0%
! CCTGATGACAGAAGCACATC+GGG - chr1_3:36000307-36000326 Msa0116770:five_prime_UTR 50.0%
ATCGGGAGCCTGCATATTTC+TGG - chr1_3:36000324-36000343 Msa0116770:five_prime_UTR 50.0%
TCGGGAGCCTGCATATTTCT+GGG - chr1_3:36000325-36000344 Msa0116770:five_prime_UTR 50.0%
! TGGGTCCCAATCTAGTTTCC+TGG - chr1_3:36000344-36000363 Msa0116770:intron 50.0%
! GTCCCAATCTAGTTTCCTGG+TGG - chr1_3:36000347-36000366 Msa0116770:intron 50.0%
GCCCACCAGGAAACTAGATT+GGG + chr1_3:36000352-36000371 None:intergenic 50.0%
TGCCCACCAGGAAACTAGAT+TGG + chr1_3:36000353-36000372 None:intergenic 50.0%
! ATCTAGTTTCCTGGTGGGCA+AGG - chr1_3:36000353-36000372 Msa0116770:intron 50.0%
TCTCAGCAGAAGCTTGTGCA+AGG + chr1_3:36000426-36000445 None:intergenic 50.0%
TGGTTCTTGAGTGCAGGACT+GGG + chr1_3:36000546-36000565 None:intergenic 50.0%
! TTGGTTCTTGAGTGCAGGAC+TGG + chr1_3:36000547-36000566 None:intergenic 50.0%
! TGTGCTTGGTTCTTGAGTGC+AGG + chr1_3:36000552-36000571 None:intergenic 50.0%
GCACTCAAGAACCAAGCACA+TGG - chr1_3:36000552-36000571 Msa0116770:intron 50.0%
TAGTCAAGACATCTGCCCAC+TGG + chr1_3:36000651-36000670 None:intergenic 50.0%
! TTGTGACACCCTCGGTTTGA+AGG - chr1_3:36000720-36000739 Msa0116770:five_prime_UTR 50.0%
! TGTGACACCCTCGGTTTGAA+GGG - chr1_3:36000721-36000740 Msa0116770:five_prime_UTR 50.0%
!! CAAAAGGCACTCAATAGGCC+AGG + chr1_3:36001445-36001464 None:intergenic 50.0%
AGCTACAGAAGCCAAGGAAG+TGG - chr1_3:36001677-36001696 Msa0116770:intron 50.0%
CCTGATTCCGATAGCAATGG+GGG - chr1_3:36001711-36001730 Msa0116770:intron 50.0%
TTCCAGACCCCCATTGCTAT+CGG + chr1_3:36001721-36001740 None:intergenic 50.0%
GTCAGGGGCAGGAAAATTCA+TGG + chr1_3:36001904-36001923 None:intergenic 50.0%
ATCTCCACTTCCTGTTGGTC+AGG - chr1_3:36002042-36002061 Msa0116770:intron 50.0%
GAAAGATAGGCCTGACCAAC+AGG + chr1_3:36002055-36002074 None:intergenic 50.0%
TTTACATCACAGCCGACCCA+AGG - chr1_3:36002365-36002384 Msa0116770:intron 50.0%
TTAGCAGCCTTACCTTGGGT+CGG + chr1_3:36002380-36002399 None:intergenic 50.0%
! GGCTTTAGCAGCCTTACCTT+GGG + chr1_3:36002384-36002403 None:intergenic 50.0%
GCTGCTAAAGCCCTTGCTTT+AGG - chr1_3:36002392-36002411 Msa0116770:intron 50.0%
! CACGAGCGAAAAGTGTAAGG+CGG + chr1_3:36002704-36002723 None:intergenic 50.0%
! GAGCACGAGCGAAAAGTGTA+AGG + chr1_3:36002707-36002726 None:intergenic 50.0%
! GCGCAGTGGTATTTTCGGAA+TGG + chr1_3:36002735-36002754 None:intergenic 50.0%
CGCTAGTTAAACTAGCGCAG+TGG + chr1_3:36002749-36002768 None:intergenic 50.0%
GTGGTGGTTAATTCGTGTGG+TGG + chr1_3:36003037-36003056 None:intergenic 50.0%
GGTGTGGTGGTTAATTCGTG+TGG + chr1_3:36003040-36003059 None:intergenic 50.0%
GGCCTGTTTGGGAGTTTAGG+AGG - chr1_3:35979389-35979408 Msa0116770:three_prime_UTR 55.0%
CCCCTCCTAAACTCCCAAAC+AGG + chr1_3:35979394-35979413 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG + chr1_3:35979550-35979569 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG - chr1_3:35979554-35979573 Msa0116770:intron 55.0%
CTAAAGCTCCCGCATACGCA+GGG - chr1_3:35979555-35979574 Msa0116770:intron 55.0%
CGACACGACACCCTAATCGT+TGG - chr1_3:35980309-35980328 Msa0116770:intron 55.0%
AGGATGAGAAGACCAGGAGC+CGG + chr1_3:35980576-35980595 None:intergenic 55.0%
! GGGAAATACTTGCTGCTGCC+GGG - chr1_3:35980636-35980655 Msa0116770:intron 55.0%
! GGAAATACTTGCTGCTGCCG+GGG - chr1_3:35980637-35980656 Msa0116770:intron 55.0%
GATCCTGCATTCCAGGGAGT+GGG - chr1_3:35980888-35980907 Msa0116770:intron 55.0%
ACAATCTCTGACCCACTCCC+TGG + chr1_3:35980902-35980921 None:intergenic 55.0%
TCTGTGAGTGAGTCCGTGGT+AGG + chr1_3:35981735-35981754 None:intergenic 55.0%
TACCACGGACTCACTCACAG+AGG - chr1_3:35981734-35981753 Msa0116770:intron 55.0%
GCCAGGCCATTCGACTCTTA+GGG - chr1_3:35981756-35981775 Msa0116770:intron 55.0%
ACCCTAAGAGTCGAATGGCC+TGG + chr1_3:35981760-35981779 None:intergenic 55.0%
TGATGCTGCTCTTGGAGGAC+GGG - chr1_3:35982333-35982352 Msa0116770:intron 55.0%
TTTGGCAGGTCCCGTTTGCA+AGG - chr1_3:35982593-35982612 Msa0116770:intron 55.0%
GGACCTTCCTTGGAGACCAT+TGG - chr1_3:35983661-35983680 Msa0116770:intron 55.0%
CAGCCAATGGTCTCCAAGGA+AGG + chr1_3:35983667-35983686 None:intergenic 55.0%
GGGGACTGAATGTCAGCCAA+TGG + chr1_3:35983680-35983699 None:intergenic 55.0%
TGGAGGGAACGATAGGCACA+AGG + chr1_3:35983789-35983808 None:intergenic 55.0%
CGAGGATCGAGGTTCACATG+AGG + chr1_3:35983989-35984008 None:intergenic 55.0%
TAGACTGGACATCTGGACCG+TGG + chr1_3:35984691-35984710 None:intergenic 55.0%
CGGTCCAGATGTCCAGTCTA+AGG - chr1_3:35984691-35984710 Msa0116770:intron 55.0%
CGCACCTTAGACTGGACATC+TGG + chr1_3:35984698-35984717 None:intergenic 55.0%
! GATGTCCAGTCTAAGGTGCG+AGG - chr1_3:35984698-35984717 Msa0116770:intron 55.0%
! TGTCCAGTCTAAGGTGCGAG+GGG - chr1_3:35984700-35984719 Msa0116770:intron 55.0%
CCAGCACAGCCCCATAAAAC+CGG + chr1_3:35984805-35984824 None:intergenic 55.0%
GTCCATTAGTCAGGCCCACT+AGG - chr1_3:35985274-35985293 Msa0116770:intron 55.0%
TGGCACCTCGCAGACAACAA+CGG + chr1_3:35986361-35986380 None:intergenic 55.0%
TTTCGGATGATGACTGGCGG+TGG + chr1_3:35986381-35986400 None:intergenic 55.0%
! ACCCAGCTGCGCTACTTTCT+GGG - chr1_3:35986442-35986461 Msa0116770:intron 55.0%
!! TTGTGGTGGTGGCTGGTTGT+GGG + chr1_3:35986475-35986494 None:intergenic 55.0%
!! TTTGTGGTGGTGGCTGGTTG+TGG + chr1_3:35986476-35986495 None:intergenic 55.0%
!! CACTTGTTTGTGGTGGTGGC+TGG + chr1_3:35986482-35986501 None:intergenic 55.0%
GGCACACTTGTTTGTGGTGG+TGG + chr1_3:35986486-35986505 None:intergenic 55.0%
!! AGCTACGCTTCTGGTGATGG+AGG + chr1_3:35986527-35986546 None:intergenic 55.0%
AGCAGCTACGCTTCTGGTGA+TGG + chr1_3:35986530-35986549 None:intergenic 55.0%
TCTAGCAGCAGCTACGCTTC+TGG + chr1_3:35986536-35986555 None:intergenic 55.0%
AAGTCCCCTGTTGCAGATCC+AGG + chr1_3:35986715-35986734 None:intergenic 55.0%
ATAAGGTTGCCTCCCCCTAC+CGG - chr1_3:35986755-35986774 Msa0116770:intron 55.0%
!! AACAGACATTTCTGGCGCGG+AGG - chr1_3:35986835-35986854 Msa0116770:intron 55.0%
AAGATGGCTGCGGTGGTTGT+CGG + chr1_3:35987049-35987068 None:intergenic 55.0%
! TTTGCTGGACTGTGGTGCTG+AGG - chr1_3:35987490-35987509 Msa0116770:intron 55.0%
GCTAGTACTGTTGCCGAGGA+TGG - chr1_3:35987766-35987785 Msa0116770:intron 55.0%
AGGTCACAGAGGATAGAGCC+AGG + chr1_3:35989175-35989194 None:intergenic 55.0%
GGTGACAAGACAGGTCACAG+AGG + chr1_3:35989186-35989205 None:intergenic 55.0%
GAAGATGCCAGCGAACAACC+TGG + chr1_3:35989352-35989371 None:intergenic 55.0%
TGCTAGCTGCTGCTGTTCGA+TGG + chr1_3:35990743-35990762 None:intergenic 55.0%
ACAGCAGCAGCTAGCAGCAA+AGG - chr1_3:35990747-35990766 Msa0116770:intron 55.0%
CGAAGAAAATGCCGGACGAG+TGG - chr1_3:35991046-35991065 Msa0116770:intron 55.0%
GTGCTTCTTCTCCACTCGTC+CGG + chr1_3:35991060-35991079 None:intergenic 55.0%
! GCTTCCATAGTCGACTTCCC+AGG + chr1_3:35991240-35991259 None:intergenic 55.0%
! GACGCGTGATGGAGAGCTAT+CGG - chr1_3:35991274-35991293 Msa0116770:intron 55.0%
! CGTGATGGAGAGCTATCGGA+TGG - chr1_3:35991278-35991297 Msa0116770:intron 55.0%
CCCTGGAGAAGAAAGGGGTT+AGG - chr1_3:35991379-35991398 Msa0116770:intron 55.0%
! TAGTCTTGCTTGGTGAGCCG+AGG - chr1_3:35991495-35991514 Msa0116770:intron 55.0%
! AGTCTTGCTTGGTGAGCCGA+GGG - chr1_3:35991496-35991515 Msa0116770:intron 55.0%
GAGCCGAGGGAGGAATTGAA+CGG - chr1_3:35991509-35991528 Msa0116770:intron 55.0%
AGCCGAGGGAGGAATTGAAC+GGG - chr1_3:35991510-35991529 Msa0116770:intron 55.0%
CTCCCGTTCAATTCCTCCCT+CGG + chr1_3:35991515-35991534 None:intergenic 55.0%
! AGGCAAGCCCTAGAAGCGTA+TGG - chr1_3:35991548-35991567 Msa0116770:intron 55.0%
ACGGAGAAGTAGGTCTACCC+TGG - chr1_3:35991622-35991641 Msa0116770:intron 55.0%
GAGAAGTAGGTCTACCCTGG+AGG - chr1_3:35991625-35991644 Msa0116770:intron 55.0%
GCCATCGTATTCAAGCTGGG+TGG - chr1_3:35991741-35991760 Msa0116770:intron 55.0%
GCTACCCCCACTCTCTCTAA+TGG + chr1_3:35991978-35991997 None:intergenic 55.0%
!! CTTTGGGATTGGCCATGCTG+TGG - chr1_3:35993643-35993662 Msa0116770:CDS 55.0%
AGGACTGTACCTCCACAGCA+TGG + chr1_3:35993658-35993677 None:intergenic 55.0%
TCAAACGGGTCAAGTGGAGG+GGG - chr1_3:35995172-35995191 Msa0116770:intron 55.0%
GAAGGCAGAATGGGCATGAG+AGG + chr1_3:35995416-35995435 None:intergenic 55.0%
!! CTCTGGAACAGGACTGTCAC+TGG + chr1_3:35995870-35995889 None:intergenic 55.0%
CGTAGCAGTAGACATGGCTC+TGG + chr1_3:35996165-35996184 None:intergenic 55.0%
ATCAGGTCCCTGTGAGAGAC+TGG + chr1_3:35996677-35996696 None:intergenic 55.0%
AATGGCCAGTTCAGAGGACG+TGG - chr1_3:35996986-35997005 Msa0116770:intron 55.0%
GGTGGAAGATTCAGAGGACG+TGG - chr1_3:35997019-35997038 Msa0116770:intron 55.0%
GGAAGATTCAGAGGACGTGG+TGG - chr1_3:35997022-35997041 Msa0116770:intron 55.0%
TACAGTCCCTATGGCTCACC+AGG - chr1_3:35997148-35997167 Msa0116770:intron 55.0%
TAGCCTCCTGGTGAGCCATA+GGG + chr1_3:35997157-35997176 None:intergenic 55.0%
TATGGCTCACCAGGAGGCTA+CGG - chr1_3:35997157-35997176 Msa0116770:intron 55.0%
TTAGGCCTCCTACACAGGCT+GGG - chr1_3:35997239-35997258 Msa0116770:intron 55.0%
TGATTCCCAGCCTGTGTAGG+AGG + chr1_3:35997247-35997266 None:intergenic 55.0%
CTCTGATTCCCAGCCTGTGT+AGG + chr1_3:35997250-35997269 None:intergenic 55.0%
ACACAGGCTGGGAATCAGAG+AGG - chr1_3:35997250-35997269 Msa0116770:intron 55.0%
GAGCCAGTTAAGAAGGCCTG+GGG + chr1_3:35997283-35997302 None:intergenic 55.0%
CTGAGCCAGTTAAGAAGGCC+TGG + chr1_3:35997285-35997304 None:intergenic 55.0%
AATGCCTGGTACCCTGACTC+AGG - chr1_3:35997325-35997344 Msa0116770:intron 55.0%
CCCTGATGCATCCAACCTCA+TGG - chr1_3:35997366-35997385 Msa0116770:intron 55.0%
CAGGAGGATTCAACTGGTGC+AGG + chr1_3:35998108-35998127 None:intergenic 55.0%
GCACCAGTTGAATCCTCCTG+TGG - chr1_3:35998108-35998127 Msa0116770:intron 55.0%
GAGGTGCATCACTCACCATC+TGG - chr1_3:35999902-35999921 Msa0116770:intron 55.0%
ATAGGTTCAGTGGAGCTGGC+AGG + chr1_3:36000247-36000266 None:intergenic 55.0%
CCCGATGTGCTTCTGTCATC+AGG + chr1_3:36000310-36000329 None:intergenic 55.0%
ATGTGCCTGCTCAAGACCAG+TGG - chr1_3:36000632-36000651 Msa0116770:intron 55.0%
TGTGCCTGCTCAAGACCAGT+GGG - chr1_3:36000633-36000652 Msa0116770:intron 55.0%
AGGAATCTGGCAGTGGACAG+AGG + chr1_3:36000676-36000695 None:intergenic 55.0%
CTGAGGGTTTGTGACACCCT+CGG - chr1_3:36000712-36000731 Msa0116770:five_prime_UTR 55.0%
! GTGACACCCTCGGTTTGAAG+GGG - chr1_3:36000722-36000741 Msa0116770:five_prime_UTR 55.0%
! TGACACCCTCGGTTTGAAGG+GGG - chr1_3:36000723-36000742 Msa0116770:five_prime_UTR 55.0%
ACATCCCCCCTTCAAACCGA+GGG + chr1_3:36000731-36000750 None:intergenic 55.0%
AACATCCCCCCTTCAAACCG+AGG + chr1_3:36000732-36000751 None:intergenic 55.0%
CCCCCATTGCTATCGGAATC+AGG + chr1_3:36001714-36001733 None:intergenic 55.0%
TTCCGATAGCAATGGGGGTC+TGG - chr1_3:36001716-36001735 Msa0116770:intron 55.0%
GGGGCAGGAAAATTCATGGG+AGG + chr1_3:36001900-36001919 None:intergenic 55.0%
TAGGCCTGACCAACAGGAAG+TGG + chr1_3:36002049-36002068 None:intergenic 55.0%
AGCAGGTCTCGCTTCCATCT+TGG + chr1_3:36002133-36002152 None:intergenic 55.0%
ATCACAGCCGACCCAAGGTA+AGG - chr1_3:36002370-36002389 Msa0116770:intron 55.0%
! GGGCTTTAGCAGCCTTACCT+TGG + chr1_3:36002385-36002404 None:intergenic 55.0%
! TGCGGGAGCTTTAGTGCACC+GGG + chr1_3:35979549-35979568 None:intergenic 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr1_3:35979582-35979601 None:intergenic 60.0%
GGATGAGAAGACCAGGAGCC+GGG + chr1_3:35980575-35980594 None:intergenic 60.0%
GGATCCTGCATTCCAGGGAG+TGG - chr1_3:35980887-35980906 Msa0116770:intron 60.0%
TGACCCACTCCCTGGAATGC+AGG + chr1_3:35980894-35980913 None:intergenic 60.0%
AGATGGGCAGGGCTAGACTC+TGG + chr1_3:35981601-35981620 None:intergenic 60.0%
GGCCAGGCCATTCGACTCTT+AGG - chr1_3:35981755-35981774 Msa0116770:intron 60.0%
!! TTTGACGGGTGTCGGCAGGA+AGG + chr1_3:35983182-35983201 None:intergenic 60.0%
!! CTTGTTTGACGGGTGTCGGC+AGG + chr1_3:35983186-35983205 None:intergenic 60.0%
GAAGGTCCGGCACTACTGGT+TGG + chr1_3:35983649-35983668 None:intergenic 60.0%
CAAGGAAGGTCCGGCACTAC+TGG + chr1_3:35983653-35983672 None:intergenic 60.0%
! CAGTAGTGCCGGACCTTCCT+TGG - chr1_3:35983651-35983670 Msa0116770:intron 60.0%
ACACCCCTCGCACCTTAGAC+TGG + chr1_3:35984706-35984725 None:intergenic 60.0%
!! CCGGTTTTATGGGGCTGTGC+TGG - chr1_3:35984802-35984821 Msa0116770:intron 60.0%
TGCAGCCGTTGTTGTCTGCG+AGG - chr1_3:35986353-35986372 Msa0116770:intron 60.0%
AAAGTAGCGCAGCTGGGTGG+CGG + chr1_3:35986440-35986459 None:intergenic 60.0%
CAGAAAGTAGCGCAGCTGGG+TGG + chr1_3:35986443-35986462 None:intergenic 60.0%
! CACCCAGCTGCGCTACTTTC+TGG - chr1_3:35986441-35986460 Msa0116770:intron 60.0%
CCCCAGAAAGTAGCGCAGCT+GGG + chr1_3:35986446-35986465 None:intergenic 60.0%
! CCCAGCTGCGCTACTTTCTG+GGG - chr1_3:35986443-35986462 Msa0116770:intron 60.0%
TCCCCAGAAAGTAGCGCAGC+TGG + chr1_3:35986447-35986466 None:intergenic 60.0%
! AGCTGCGCTACTTTCTGGGG+AGG - chr1_3:35986446-35986465 Msa0116770:intron 60.0%
GGCGAGTGTGACCACATCAC+AGG + chr1_3:35986646-35986665 None:intergenic 60.0%
TCGCGCCTGGATCTGCAACA+GGG - chr1_3:35986707-35986726 Msa0116770:intron 60.0%
GGGGGAGGCAACCTTATCTC+AGG + chr1_3:35986752-35986771 None:intergenic 60.0%
TATGCAGAACCGGTAGGGGG+AGG + chr1_3:35986767-35986786 None:intergenic 60.0%
!! GCGCGGAGGTATCCTCTTCA+TGG - chr1_3:35986849-35986868 Msa0116770:intron 60.0%
AGATGGCTGCGGTGGTTGTC+GGG + chr1_3:35987048-35987067 None:intergenic 60.0%
GTTTGGCCGGGGAACACAAG+TGG - chr1_3:35987523-35987542 Msa0116770:intron 60.0%
AGCAGCTTGCCAAGCTGCTG+AGG - chr1_3:35987556-35987575 Msa0116770:intron 60.0%
CGAGGGAGGAATTGAACGGG+AGG - chr1_3:35991513-35991532 Msa0116770:intron 60.0%
TGAACGGGAGGCTAGACACC+TGG - chr1_3:35991525-35991544 Msa0116770:intron 60.0%
CTGCGTGTGTGTCGAGTACG+AGG + chr1_3:35992964-35992983 None:intergenic 60.0%
!! TGGGATTGGCCATGCTGTGG+AGG - chr1_3:35993646-35993665 Msa0116770:CDS 60.0%
ACACACACACACCCCTCTCG+AGG + chr1_3:35994111-35994130 None:intergenic 60.0%
CAAACGGGTCAAGTGGAGGG+GGG - chr1_3:35995173-35995192 Msa0116770:intron 60.0%
TGGAGGGGGGCCAAGACAAA+GGG - chr1_3:35995186-35995205 Msa0116770:intron 60.0%
!! CTGGCCACAGGAGAGGTATC+AGG + chr1_3:35995851-35995870 None:intergenic 60.0%
ACTGTCACTGGCCACAGGAG+AGG + chr1_3:35995858-35995877 None:intergenic 60.0%
ACAGGACTGTCACTGGCCAC+AGG + chr1_3:35995863-35995882 None:intergenic 60.0%
CGTTGCGCATCAGAGGGAGT+AGG + chr1_3:35996194-35996213 None:intergenic 60.0%
TCGTTCTCCTTCGCCACTCG+TGG - chr1_3:35996489-35996508 Msa0116770:intron 60.0%
AAACCTGCCACGAGTGGCGA+AGG + chr1_3:35996499-35996518 None:intergenic 60.0%
TTCGCCACTCGTGGCAGGTT+TGG - chr1_3:35996498-35996517 Msa0116770:intron 60.0%
TCGCCACTCGTGGCAGGTTT+GGG - chr1_3:35996499-35996518 Msa0116770:intron 60.0%
CATCCCAAACCTGCCACGAG+TGG + chr1_3:35996505-35996524 None:intergenic 60.0%
! AGAGGACGTGGTGGCCGTTT+TGG - chr1_3:35996998-35997017 Msa0116770:intron 60.0%
! AGAGGACGTGGTGGCCGTTT+TGG - chr1_3:35996998-35997017 Msa0116770:intron 60.0%
AGTCCCTATGGCTCACCAGG+AGG - chr1_3:35997151-35997170 Msa0116770:intron 60.0%
GTAGCCTCCTGGTGAGCCAT+AGG + chr1_3:35997158-35997177 None:intergenic 60.0%
CTTAGGCCTCCTACACAGGC+TGG - chr1_3:35997238-35997257 Msa0116770:intron 60.0%
TCAGAGAGGTCAAGCTCCCC+AGG - chr1_3:35997264-35997283 Msa0116770:intron 60.0%
GCTCCCCAGGCCTTCTTAAC+TGG - chr1_3:35997277-35997296 Msa0116770:intron 60.0%
! AGCACCTGAGTCAGGGTACC+AGG + chr1_3:35997332-35997351 None:intergenic 60.0%
GTCTACATGGTGCAGCCTCC+TGG - chr1_3:35999572-35999591 Msa0116770:CDS 60.0%
GGTCTGTTTCCTTGCCCACC+AGG + chr1_3:36000365-36000384 None:intergenic 60.0%
!! TCTGCCCACTGGTCTTGAGC+AGG + chr1_3:36000640-36000659 None:intergenic 60.0%
! GACACCCTCGGTTTGAAGGG+GGG - chr1_3:36000724-36000743 Msa0116770:five_prime_UTR 60.0%
TTCCCGGACCCTGCGTATGC+GGG + chr1_3:35979566-35979585 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG + chr1_3:35979567-35979586 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG - chr1_3:35979566-35979585 Msa0116770:intron 65.0%
CATACGCAGGGTCCGGGAAG+GGG - chr1_3:35979567-35979586 Msa0116770:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr1_3:35979580-35979599 Msa0116770:intron 65.0%
GGCCTCTGTGAGTGAGTCCG+TGG + chr1_3:35981739-35981758 None:intergenic 65.0%
CGGACTCACTCACAGAGGCC+AGG - chr1_3:35981739-35981758 Msa0116770:intron 65.0%
TGCTGCTCTTGGAGGACGGG+CGG - chr1_3:35982336-35982355 Msa0116770:intron 65.0%
GTCGCGCCTGGATCTGCAAC+AGG - chr1_3:35986706-35986725 Msa0116770:intron 65.0%
CGCGCCTGGATCTGCAACAG+GGG - chr1_3:35986708-35986727 Msa0116770:intron 65.0%
! CTTGCTTGGTGAGCCGAGGG+AGG - chr1_3:35991499-35991518 Msa0116770:intron 65.0%
ACGGGAGGCTAGACACCTGG+AGG - chr1_3:35991528-35991547 Msa0116770:intron 65.0%
!! CGCTTCTAGGGCTTGCCTCC+AGG + chr1_3:35991546-35991565 None:intergenic 65.0%
GTGGAGGGGGGCCAAGACAA+AGG - chr1_3:35995185-35995204 Msa0116770:intron 65.0%
ACAGATGCAGCGCGCGAAGC+AGG - chr1_3:35996371-35996390 Msa0116770:intron 65.0%
TCTCCTTCGCCACTCGTGGC+AGG - chr1_3:35996493-35996512 Msa0116770:intron 65.0%
GGCCAGTTCAGAGGACGTGG+TGG - chr1_3:35996989-35997008 Msa0116770:intron 65.0%
GGCCACCACGTCCTCTGAAC+TGG + chr1_3:35996994-35997013 None:intergenic 65.0%
!! GGACGTGGTGGCCGTTTTGG+TGG - chr1_3:35997001-35997020 Msa0116770:intron 65.0%
!! GGACGTGGTGGCCGTTTTGG+TGG - chr1_3:35997001-35997020 Msa0116770:intron 65.0%
GCTCCCGCATACGCAGGGTC+CGG - chr1_3:35979560-35979579 Msa0116770:intron 70.0%
CTCCCGCATACGCAGGGTCC+GGG - chr1_3:35979561-35979580 Msa0116770:intron 70.0%
CGCATACGCAGGGTCCGGGA+AGG - chr1_3:35979565-35979584 Msa0116770:intron 70.0%
!! CGGGTGTCGGCAGGAAGGAC+TGG + chr1_3:35983177-35983196 None:intergenic 70.0%
GGCGCGACTGACTGCAGTGG+TGG + chr1_3:35986694-35986713 None:intergenic 70.0%
CCAGGCGCGACTGACTGCAG+TGG + chr1_3:35986697-35986716 None:intergenic 70.0%
CCACTGCAGTCAGTCGCGCC+TGG - chr1_3:35986694-35986713 Msa0116770:intron 70.0%
! GGAGGTGCACCGTAGCCTCC+TGG + chr1_3:35997169-35997188 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 35978552 36003073 35978552 ID=Msa0116770;Name=Msa0116770
chr1_3 mRNA 35978552 36003073 35978552 ID=Msa0116770-mRNA-1;Parent=Msa0116770;Name=Msa0116770-mRNA-1;_AED=0.13;_eAED=0.13;_QI=395|0.83|0.94|1|0.83|0.89|19|896|691
chr1_3 exon 35978552 35979561 35978552 ID=Msa0116770-mRNA-1:exon:11649;Parent=Msa0116770-mRNA-1
chr1_3 exon 35979762 35979985 35979762 ID=Msa0116770-mRNA-1:exon:11648;Parent=Msa0116770-mRNA-1
chr1_3 exon 35985735 35985981 35985735 ID=Msa0116770-mRNA-1:exon:11647;Parent=Msa0116770-mRNA-1
chr1_3 exon 35986355 35986459 35986355 ID=Msa0116770-mRNA-1:exon:11646;Parent=Msa0116770-mRNA-1
chr1_3 exon 35987958 35988020 35987958 ID=Msa0116770-mRNA-1:exon:11645;Parent=Msa0116770-mRNA-1
chr1_3 exon 35988361 35988492 35988361 ID=Msa0116770-mRNA-1:exon:11644;Parent=Msa0116770-mRNA-1
chr1_3 exon 35989021 35989125 35989021 ID=Msa0116770-mRNA-1:exon:11643;Parent=Msa0116770-mRNA-1
chr1_3 exon 35990839 35990967 35990839 ID=Msa0116770-mRNA-1:exon:11642;Parent=Msa0116770-mRNA-1
chr1_3 exon 35991065 35991202 35991065 ID=Msa0116770-mRNA-1:exon:11641;Parent=Msa0116770-mRNA-1
chr1_3 exon 35991284 35991352 35991284 ID=Msa0116770-mRNA-1:exon:11640;Parent=Msa0116770-mRNA-1
chr1_3 exon 35991424 35991492 35991424 ID=Msa0116770-mRNA-1:exon:11639;Parent=Msa0116770-mRNA-1
chr1_3 exon 35993398 35993556 35993398 ID=Msa0116770-mRNA-1:exon:11638;Parent=Msa0116770-mRNA-1
chr1_3 exon 35993641 35993741 35993641 ID=Msa0116770-mRNA-1:exon:11637;Parent=Msa0116770-mRNA-1
chr1_3 exon 35993820 35993970 35993820 ID=Msa0116770-mRNA-1:exon:11636;Parent=Msa0116770-mRNA-1
chr1_3 exon 35994048 35994207 35994048 ID=Msa0116770-mRNA-1:exon:11635;Parent=Msa0116770-mRNA-1
chr1_3 exon 35999531 35999599 35999531 ID=Msa0116770-mRNA-1:exon:11634;Parent=Msa0116770-mRNA-1
chr1_3 exon 36000262 36000361 36000262 ID=Msa0116770-mRNA-1:exon:11633;Parent=Msa0116770-mRNA-1
chr1_3 exon 36000706 36000792 36000706 ID=Msa0116770-mRNA-1:exon:11632;Parent=Msa0116770-mRNA-1
chr1_3 exon 36002825 36003073 36002825 ID=Msa0116770-mRNA-1:exon:11631;Parent=Msa0116770-mRNA-1
chr1_3 five_prime_UTR 36002825 36003073 36002825 ID=Msa0116770-mRNA-1:five_prime_utr;Parent=Msa0116770-mRNA-1
chr1_3 five_prime_UTR 36000706 36000792 36000706 ID=Msa0116770-mRNA-1:five_prime_utr;Parent=Msa0116770-mRNA-1
chr1_3 five_prime_UTR 36000303 36000361 36000303 ID=Msa0116770-mRNA-1:five_prime_utr;Parent=Msa0116770-mRNA-1
chr1_3 CDS 36000262 36000302 36000262 ID=Msa0116770-mRNA-1:cds;Parent=Msa0116770-mRNA-1
chr1_3 CDS 35999531 35999599 35999531 ID=Msa0116770-mRNA-1:cds;Parent=Msa0116770-mRNA-1
chr1_3 CDS 35994048 35994207 35994048 ID=Msa0116770-mRNA-1:cds;Parent=Msa0116770-mRNA-1
chr1_3 CDS 35993820 35993970 35993820 ID=Msa0116770-mRNA-1:cds;Parent=Msa0116770-mRNA-1
chr1_3 CDS 35993641 35993741 35993641 ID=Msa0116770-mRNA-1:cds;Parent=Msa0116770-mRNA-1
chr1_3 CDS 35993398 35993556 35993398 ID=Msa0116770-mRNA-1:cds;Parent=Msa0116770-mRNA-1
chr1_3 CDS 35991424 35991492 35991424 ID=Msa0116770-mRNA-1:cds;Parent=Msa0116770-mRNA-1
chr1_3 CDS 35991284 35991352 35991284 ID=Msa0116770-mRNA-1:cds;Parent=Msa0116770-mRNA-1
chr1_3 CDS 35991065 35991202 35991065 ID=Msa0116770-mRNA-1:cds;Parent=Msa0116770-mRNA-1
chr1_3 CDS 35990839 35990967 35990839 ID=Msa0116770-mRNA-1:cds;Parent=Msa0116770-mRNA-1
chr1_3 CDS 35989021 35989125 35989021 ID=Msa0116770-mRNA-1:cds;Parent=Msa0116770-mRNA-1
chr1_3 CDS 35988361 35988492 35988361 ID=Msa0116770-mRNA-1:cds;Parent=Msa0116770-mRNA-1
chr1_3 CDS 35987958 35988020 35987958 ID=Msa0116770-mRNA-1:cds;Parent=Msa0116770-mRNA-1
chr1_3 CDS 35986355 35986459 35986355 ID=Msa0116770-mRNA-1:cds;Parent=Msa0116770-mRNA-1
chr1_3 CDS 35985735 35985981 35985735 ID=Msa0116770-mRNA-1:cds;Parent=Msa0116770-mRNA-1
chr1_3 CDS 35979762 35979985 35979762 ID=Msa0116770-mRNA-1:cds;Parent=Msa0116770-mRNA-1
chr1_3 CDS 35979448 35979561 35979448 ID=Msa0116770-mRNA-1:cds;Parent=Msa0116770-mRNA-1
chr1_3 three_prime_UTR 35978552 35979447 35978552 ID=Msa0116770-mRNA-1:three_prime_utr;Parent=Msa0116770-mRNA-1
Gene Sequence

>Msa0116770

ATGGGAAATTCTACATGGGGGATTCATATATCATCTTGCAGACAACACAAGGCAAAGGAGCTGCTTATTTTTATGATTTACACTTCTGGATTGGAAAGGATACGAGTCAGTATCATTGATGGTGAAGTCAAGTCTGAGGAAGGTGAACTTTCTAAGTCACTGTTGGAGAACAACAAATGCTATTTGCTGGACTGTGGTGCTGAGGTATTTATCTGGTTTGGCCGGGGAACACAAGTGGAAGAACGGAAAGCAGCTTGCCAAGCTGCTGAGGAGTTTGTTTCTGGCCAAAATAGGCCAAAATCTACAAGGATAACAAGGATTACTCAAGGTTATGAGACACGTTCATTTAAGTCTAACTTTGATTCTTGGCCATCAGGATCTGCTAGTACTGTTGCCGAGGATGGAAAAGGGAAAGTTACAGCATTGCTGAAGCAACAAGGGATGGGTGTAAAAGGAATGACAAAAAGTACCCCTGTAAATGAGGAAATTCCACATTTGCTTGAAGAAGGTGGAAAGATGGAGGCATGGAGAATCGATGGAAGTGACAAGACCTCATTACTGAACGAGGACATTGGTAAATTTCATAGTGGAGATTGTTACATTGTACTGTACACATACCATTCTGGTGAGAGGAAAGAAGACTACTTCTTGTGCTGCTGGTTTGGCAAAGATAGTATTGAGGAGGACCAAACAATGGCTATTCGGTTGGCTAATACAATGTCCAACTCTTTGAAGGGTAGACCTGTTCAGGGTCGCATATACGAGGGTAAAGAGTCACCACAATTTGTTGCTCTTTTCCACCCCATGGTAGTTCTTAAGGGAGGTTTGAGCACTGGATACAAAAAGTTCATAGCTGACAAAGGTTTATCAGATGAGACATACACAGAAGAATCCGTTGCGCTTATCCGAATCACTGGAACTTCCATCCATAACAATAAGGCAGCACAAGTTGATGCAGTGCCAACGTCATTGAATTCTTCCGACTGTTTTGTCTTGCAATCGGGCTCTACAGTTTTCACTTGGCATGGGAATAAATGTTCCATCGAACAGCAGCAGCTAGCAGCAAAGGTCGCAGAATTTCTAAGGCCAGGAGTTGCTTTAAAGCATGCTAAAGAAGGTACAGAAAGCTCAGCTTTCTGGCTTGCATTAGGAGGAAAACAAAACTACACCAGCAAGAAAGTTACTAATGAGAAATACATAGATATGGCTGCATCTTTGGAAGGACTATCTGCACGTGTACCCTTATATAAAGTAACAGAAGGGAACGAACCTTTCTTTTTCACTACATACTTTTCATGGGATTGGGATTATACAAGAGCTAAGGTTCACGGGAACTCATTCCAGAAACAGGTGTCTCTACTCTTTGGGATTGGCCATGCTGTGGAGGAAAAATCAAACGGGTCAAGTGGAGGGGGGCCAAGACAAAGGGCAGAAGCTTTGGCTGCTTTAACTTCTGCTTTTAAATCATCGCTTGAGAAAACAACGAGTATGTCACAAGAGAGATTGAATGGCTTAAACCATGGAGGACCAAGACAAAGAGCGGAAGCTTTAGCTGCCTTAAACTCCGCATTTAGTTCTTCATCAACAACAAAGAAAGTTACTCCTAGGCCATCTGTAAAAGGTCAAGGATCACAAAGAGCAGCAGCTGTAGCTGCTCTTTCGTCAGTTCTTACTGCTGAGAGGAAGAAACAATCACCTGATACCTCTCCTGTGGCCAGTGACAGTCCTGTTCCAGAGAAAGCTAAAAGTGAAAGTGAATATTCTGAAGTTGATGAAGCTACAGAAGCCAAGGAAGTGGAAGAAGTTTCTCCTGATTCCGATAGCAATGGGGGTCTGGAATCTGAACAAGAATATGTGGAGGATGGAGATAATGACCAAAGTAGTCAGAGGACATTCAGTTATGATCAATTAAAGACTACATCAGGAAAAAATGTGTCTAGGATTGATCTTAAACGGAGAGAGGCCTATCTTTCAGACGAAGATTTTGAAACTGTGTTTGGAATGGTAAAAGAAGCATTTTATAAGTTGCCAAGATGGAAGCGAGACCTGCTGAAAAAGAAATATGAATTGTTCTAG
Protein sequence

>Msa0116770

MGNSTWGIHISSCRQHKAKELLIFMIYTSGLERIRVSIIDGEVKSEEGELSKSLLENNKCYLLDCGAEVFIWFGRGTQVEERKAACQAAEEFVSGQNRPKSTRITRITQGYETRSFKSNFDSWPSGSASTVAEDGKGKVTALLKQQGMGVKGMTKSTPVNEEIPHLLEEGGKMEAWRIDGSDKTSLLNEDIGKFHSGDCYIVLYTYHSGERKEDYFLCCWFGKDSIEEDQTMAIRLANTMSNSLKGRPVQGRIYEGKESPQFVALFHPMVVLKGGLSTGYKKFIADKGLSDETYTEESVALIRITGTSIHNNKAAQVDAVPTSLNSSDCFVLQSGSTVFTWHGNKCSIEQQQLAAKVAEFLRPGVALKHAKEGTESSAFWLALGGKQNYTSKKVTNEKYIDMAASLEGLSARVPLYKVTEGNEPFFFTTYFSWDWDYTRAKVHGNSFQKQVSLLFGIGHAVEEKSNGSSGGGPRQRAEALAALTSAFKSSLEKTTSMSQERLNGLNHGGPRQRAEALAALNSAFSSSSTTKKVTPRPSVKGQGSQRAAAVAALSSVLTAERKKQSPDTSPVASDSPVPEKAKSESEYSEVDEATEAKEVEEVSPDSDSNGGLESEQEYVEDGDNDQSSQRTFSYDQLKTTSGKNVSRIDLKRREAYLSDEDFETVFGMVKEAFYKLPRWKRDLLKKKYELF*