AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0157300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0157300 MtrunA17_Chr1g0187801 98.673 603 8 0 1 603 1 603 0.0 1234
Msa0157300 MtrunA17_Chr1g0167721 76.910 602 132 6 4 601 2 600 0.0 936
Msa0157300 MtrunA17_Chr5g0426121 55.719 612 244 7 2 596 5 606 0.0 696
Msa0157300 MtrunA17_Chr4g0003821 28.731 536 334 19 1 510 11 524 1.49e-51 186
Msa0157300 MtrunA17_Chr3g0138841 28.163 490 278 18 2 446 94 554 2.40e-28 120
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0157300 AT1G04400.1 69.340 561 159 4 5 562 6 556 0.0 807
Msa0157300 AT1G04400.2 69.340 561 159 4 5 562 6 556 0.0 807
Msa0157300 AT4G08920.1 55.872 596 243 7 7 593 15 599 0.0 667
Msa0157300 AT3G15620.1 29.735 528 315 17 6 501 26 529 2.74e-53 191
Msa0157300 AT5G24850.1 30.105 475 270 20 2 444 82 526 4.12e-34 137
Msa0157300 AT3G15620.2 29.009 424 249 15 6 397 26 429 6.09e-32 129

Find 228 sgRNAs with CRISPR-Local

Find 365 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTAATTATGTTTCTAAATT+AGG 0.046710 1_4:+24429595 Msa0157300:five_prime_UTR
TCTGATAGCAATTCCTTTAT+TGG 0.107689 1_4:+24434481 Msa0157300:three_prime_UTR
CAAGGCTTTAACAGAATTTA+TGG 0.120110 1_4:+24431296 Msa0157300:CDS
ACTCTTCCTTGCACCCTTTC+AGG 0.148344 1_4:-24434381 None:intergenic
CACAGAAAACAGTTCATTTA+TGG 0.162448 1_4:-24433875 None:intergenic
TAAAATTGTCCTTCCTCTTT+AGG 0.172518 1_4:-24430099 None:intergenic
CAAGACTATCAAAATATTTA+AGG 0.174603 1_4:-24433981 None:intergenic
TCAGAAAGTGCCGGCATTTC+AGG 0.176635 1_4:+24433193 Msa0157300:CDS
TCGTCTACTAGATTAGTTTA+TGG 0.184761 1_4:-24434014 None:intergenic
GCCATATCTATATCAATTAT+TGG 0.201692 1_4:-24432999 None:intergenic
TGCCTTACATATTCTCCTTC+TGG 0.214099 1_4:-24432864 None:intergenic
AATGGGGAATGAAGTATTTC+TGG 0.219485 1_4:+24431766 Msa0157300:CDS
TGGCTATATTCTCAATAAAA+TGG 0.230875 1_4:+24433896 Msa0157300:three_prime_UTR
TCTTATCTAAGTTGAAAATA+AGG 0.233821 1_4:-24429442 None:intergenic
AATTTCCCACATCTTGAATA+TGG 0.234109 1_4:-24433042 None:intergenic
TTTGAAGCCTAGATATAATA+TGG 0.235090 1_4:+24429966 Msa0157300:exon
CTGTATTCCCTGTGTTTATA+TGG 0.246769 1_4:+24430073 Msa0157300:CDS
CTAATAGGTAGTTCATTCTT+AGG 0.252046 1_4:-24433218 None:intergenic
TTAATTATGTTTCTAAATTA+GGG 0.252907 1_4:+24429596 Msa0157300:five_prime_UTR
ATAATGTTATTAACTCAATA+AGG 0.254817 1_4:-24434266 None:intergenic
GTATTTCTGGGACACGCTTT+TGG 0.272715 1_4:+24431779 Msa0157300:CDS
GAACCATTGTTTGGTTTAGA+AGG 0.277961 1_4:+24429998 Msa0157300:CDS
AAGCTTGCTATGGAAATTCT+AGG 0.296623 1_4:+24434550 Msa0157300:three_prime_UTR
AAGAAAATCCACCAATCTAT+AGG 0.299613 1_4:-24434459 None:intergenic
ACTCATGAGAGAGCACTTCT+TGG 0.306648 1_4:+24431561 Msa0157300:CDS
CATGTGGGCTGAGTTGGTTT+TGG 0.306649 1_4:+24429677 Msa0157300:five_prime_UTR
TCCTTAAGGAGGACAACTTT+TGG 0.310889 1_4:-24433137 None:intergenic
CTAAGAATGAACTACCTATT+AGG 0.318143 1_4:+24433219 Msa0157300:CDS
TTGCATACTACTTTGCTATC+TGG 0.318194 1_4:-24429712 None:intergenic
AAATGTTCAATAGAGGATTT+AGG 0.326416 1_4:+24431198 Msa0157300:CDS
CAAGCAGCATCAAAAGCTTC+TGG 0.339324 1_4:+24433065 Msa0157300:CDS
CTCCAAGTCTTGAAGTTTGA+CGG 0.343433 1_4:-24431615 None:intergenic
TATTATACAAAAGGCCTTGA+TGG 0.344194 1_4:-24434406 None:intergenic
TTATCAGTGAAAAGCTATAA+TGG 0.349616 1_4:+24430775 Msa0157300:CDS
TGTTGCTTCTACCTTGGAAA+TGG 0.350799 1_4:+24431748 Msa0157300:CDS
TGCAAGCATCTCTGCCAAAA+AGG 0.354280 1_4:-24430862 None:intergenic
TTGCTACCCATATTATATCT+AGG 0.355825 1_4:-24429973 None:intergenic
TATCAGTGAAAAGCTATAAT+GGG 0.356330 1_4:+24430776 Msa0157300:CDS
CTGTAGAGCAAGTGTCTTCA+TGG 0.357346 1_4:-24433328 None:intergenic
CTGGATTGTCCTCAATTCTA+AGG 0.360401 1_4:-24430023 None:intergenic
ATTCCTTTATTGAGCCTTGA+TGG 0.361770 1_4:+24434296 Msa0157300:three_prime_UTR
TCCAAAAGTTGTCCTCCTTA+AGG 0.363395 1_4:+24433136 Msa0157300:CDS
CTCTTAGTCCAATTGCTCTA+AGG 0.366113 1_4:-24431503 None:intergenic
CAAGGTTGTTGCTCCAATAA+AGG 0.367546 1_4:-24434494 None:intergenic
ATAAGCTATAAGTACTTGTT+AGG 0.370776 1_4:+24429748 Msa0157300:five_prime_UTR
GTTGCTTCTACCTTGGAAAT+GGG 0.372170 1_4:+24431749 Msa0157300:CDS
ATGAGCACTGCAGCTGCTAC+TGG 0.373841 1_4:-24433837 None:intergenic
CACCACCTTGAAACTCTTCC+TGG 0.373919 1_4:-24430123 None:intergenic
TCCAATAATTGATATAGATA+TGG 0.381151 1_4:+24432998 Msa0157300:CDS
AAACCAAGCAACGCGTTACT+AGG 0.385656 1_4:+24431240 Msa0157300:CDS
CAGTGCTCATGGAAAGAAAA+TGG 0.390156 1_4:+24433850 Msa0157300:three_prime_UTR
TGTATGTAGGAATGGAAGAT+AGG 0.391374 1_4:-24429368 None:intergenic
TGCAGGAATGAGAGAACTTT+GGG 0.399544 1_4:+24431668 Msa0157300:CDS
TCTATATCAATTATTGGATT+CGG 0.400812 1_4:-24432993 None:intergenic
GTTGTGTTTAACCATCTCTA+TGG 0.405567 1_4:+24430273 Msa0157300:CDS
ATATGCATCAAGTTCCAAAA+AGG 0.405729 1_4:-24434075 None:intergenic
TTATCCCCGTATCTCCATTT+CGG 0.407052 1_4:+24431381 Msa0157300:CDS
TGGTCTCGAACCAGTGAAAC+AGG 0.407880 1_4:-24430721 None:intergenic
TTCCCATCAAGGCTCAATAA+AGG 0.408230 1_4:-24434299 None:intergenic
AGAAAATCCACCAATCTATA+GGG 0.409775 1_4:-24434458 None:intergenic
CTCATTCCTGCATCAACTAA+AGG 0.411661 1_4:-24431657 None:intergenic
ATAAGTATTAAGAATAAGAT+TGG 0.412388 1_4:-24434346 None:intergenic
CGTCCTAGTAACGCGTTGCT+TGG 0.415085 1_4:-24431243 None:intergenic
CGCTCAAGCTCGTGACCGTC+TGG 0.421155 1_4:-24431855 None:intergenic
ATGAGAGAACTTTGGGCTAC+AGG 0.422513 1_4:+24431675 Msa0157300:CDS
ATATTTAAGGACTTCTCATT+CGG 0.428113 1_4:-24433968 None:intergenic
CTTAGTGTGCTTAGAGCATC+AGG 0.428735 1_4:+24432948 Msa0157300:CDS
CAAGGTGGAATAAGCGAAAC+AGG 0.434780 1_4:-24430898 None:intergenic
TTTATCAGATCCTGTTTCAC+TGG 0.435781 1_4:+24430711 Msa0157300:intron
CTTATCTAAGTTGAAAATAA+GGG 0.436200 1_4:-24429441 None:intergenic
GTAGCAATAGAACCATTGTT+TGG 0.440981 1_4:+24429989 Msa0157300:CDS
TGTCCCTTTCACAAGTTTGA+AGG 0.442030 1_4:-24429656 None:intergenic
CAGCACTAGCTGCTGCTGCT+AGG 0.442114 1_4:+24430043 Msa0157300:CDS
ATGCAGGAATGAGAGAACTT+TGG 0.446720 1_4:+24431667 Msa0157300:CDS
TCTTGAATATGGCTTGAGTC+AGG 0.448589 1_4:-24433031 None:intergenic
CTAGCAGCAGCAGCTAGTGC+TGG 0.448793 1_4:-24430042 None:intergenic
TGAAAATGTTGCTTCTACCT+TGG 0.450718 1_4:+24431742 Msa0157300:CDS
GATGTAACCTCCTCTGATGA+TGG 0.452559 1_4:+24434517 Msa0157300:three_prime_UTR
TCTCGAACCAAGTGATTTCA+AGG 0.453164 1_4:-24430178 None:intergenic
TCACACTCAACTCTCCGAAA+TGG 0.453446 1_4:-24431395 None:intergenic
ACTATCTTTCACATGATTCA+CGG 0.453888 1_4:-24433288 None:intergenic
TAATGTTATTAACTCAATAA+GGG 0.454184 1_4:-24434265 None:intergenic
TTGAAACTATAACTCTGATT+CGG 0.455014 1_4:-24431710 None:intergenic
AAAGTAGTGTCCCTATAGAT+TGG 0.456375 1_4:+24434448 Msa0157300:three_prime_UTR
TTGGAACTTGATGCATATGA+AGG 0.457765 1_4:+24434080 Msa0157300:three_prime_UTR
CACTACTTTGAAAGAAGTCT+TGG 0.464493 1_4:-24434434 None:intergenic
GGCTACCCTTTAGTTGATGC+AGG 0.466577 1_4:+24431651 Msa0157300:CDS
TTGGCACATTATTATACAAA+AGG 0.466771 1_4:-24434415 None:intergenic
TCATTCCTGCATCAACTAAA+GGG 0.470820 1_4:-24431656 None:intergenic
CTGAGTGGATCCATCATCCT+TGG 0.471071 1_4:+24432916 Msa0157300:CDS
CCAAAATCTTATCAAAGAAA+AGG 0.471643 1_4:-24429407 None:intergenic
AGCACTAGCTGCTGCTGCTA+GGG 0.473785 1_4:+24430044 Msa0157300:CDS
GAGATGCTTGCACAAGCAAA+TGG 0.474718 1_4:+24430873 Msa0157300:CDS
CGGTCACGAGCTTGAGCGCT+TGG 0.474915 1_4:+24431860 Msa0157300:CDS
TAGAAGGGACCTTAGAATTG+AGG 0.477865 1_4:+24430014 Msa0157300:CDS
AACTCTCCGAAATGGAGATA+CGG 0.477912 1_4:-24431387 None:intergenic
CTCGGCTGGCAGTATATCTC+AGG 0.480304 1_4:+24431825 Msa0157300:CDS
CCTTGATGGGAACTCATCAT+TGG 0.480346 1_4:+24434310 Msa0157300:three_prime_UTR
CTAGCTGCTGCTGCTAGGGA+TGG 0.482748 1_4:+24430048 Msa0157300:CDS
AAAGAAAAGCTAGTGGAACT+TGG 0.484127 1_4:+24430751 Msa0157300:CDS
ATCCGTCAAACTTCAAGACT+TGG 0.488443 1_4:+24431613 Msa0157300:CDS
AGTCAAGAAATGTTCAATAG+AGG 0.489309 1_4:+24431191 Msa0157300:CDS
CTAGGACGAGCATGGTCTCC+AGG 0.489522 1_4:+24431258 Msa0157300:CDS
ACTCTCCGAAATGGAGATAC+GGG 0.489556 1_4:-24431386 None:intergenic
TTCTTAGGATCCTGAAATGC+CGG 0.490558 1_4:-24433203 None:intergenic
GACATGTATACATGCTAGAA+AGG 0.494362 1_4:+24434123 Msa0157300:three_prime_UTR
ATCCAGAAGGAGAATATGTA+AGG 0.496224 1_4:+24432862 Msa0157300:CDS
GATCAGTCCTTGAAATCACT+TGG 0.496518 1_4:+24430171 Msa0157300:CDS
ATGCCTTCAAACTTGTGAAA+GGG 0.496931 1_4:+24429653 Msa0157300:five_prime_UTR
TACTTCACTACTCCAAGAAT+AGG 0.498999 1_4:+24431328 Msa0157300:CDS
GAGTACTCTCAATGCTCTCT+TGG 0.499541 1_4:+24430221 Msa0157300:CDS
AGTAGCAGCTGCAGTGCTCA+TGG 0.499803 1_4:+24433839 Msa0157300:three_prime_UTR
GGATCTGTTGTATGAGCCTT+GGG 0.500509 1_4:+24430798 Msa0157300:CDS
CTTTATTGGAGCAACAACCT+TGG 0.503468 1_4:+24434495 Msa0157300:three_prime_UTR
TTTATCCAGGAAGAGTTTCA+AGG 0.505143 1_4:+24430118 Msa0157300:CDS
TTGTCAGCATTGCTCCAACC+TGG 0.505947 1_4:-24431276 None:intergenic
AACCATTGTTTGGTTTAGAA+GGG 0.509245 1_4:+24429999 Msa0157300:CDS
AGATCACATGTCAAGGAGAA+AGG 0.510272 1_4:-24429286 None:intergenic
TGAAGAGAAGAGAAAGAACA+AGG 0.511587 1_4:+24433259 Msa0157300:CDS
CTACTCCAAGAATAGGCAAA+AGG 0.511893 1_4:+24431335 Msa0157300:CDS
AAGGGACATGTGGGCTGAGT+TGG 0.512399 1_4:+24429671 Msa0157300:five_prime_UTR
TTCCTTTATTGAGCCTTGAT+GGG 0.513632 1_4:+24434297 Msa0157300:three_prime_UTR
ATTATACAAAAGGCCTTGAT+GGG 0.516458 1_4:-24434405 None:intergenic
AGCCGAGGATATCACATTCA+AGG 0.517876 1_4:-24431809 None:intergenic
AGCTTCTGGCTCTGAAGCAA+GGG 0.519234 1_4:+24433079 Msa0157300:CDS
CAAACTTGAGAACTAAGATA+AGG 0.520144 1_4:-24429506 None:intergenic
ATGGGGAATGAAGTATTTCT+GGG 0.522424 1_4:+24431767 Msa0157300:CDS
GAAGCAGTCTTTAGTTCACT+TGG 0.523042 1_4:+24430149 Msa0157300:CDS
AAGCTTCTGGCTCTGAAGCA+AGG 0.524562 1_4:+24433078 Msa0157300:CDS
TGTTCACAAGTGTTTATCAC+CGG 0.530213 1_4:-24434594 None:intergenic
CAGGAAGAGTTTCAAGGTGG+TGG 0.530377 1_4:+24430124 Msa0157300:CDS
GTCGATGTCCCTCCACTGCA+TGG 0.531062 1_4:-24434778 None:intergenic
GATGCCTTCAAACTTGTGAA+AGG 0.535690 1_4:+24429652 Msa0157300:five_prime_UTR
ACATGCAGTGTATGTAGGAA+TGG 0.537066 1_4:-24429376 None:intergenic
TTGTGGAACAGAAAATGAAT+AGG 0.538477 1_4:-24433387 None:intergenic
GTTTACAAAGAAGCTTGCTA+TGG 0.539191 1_4:+24434540 Msa0157300:three_prime_UTR
TCGCATAAAGCAGATATTGT+GGG 0.539284 1_4:+24431437 Msa0157300:CDS
GGGATCTGTTGTATGAGCCT+TGG 0.542320 1_4:+24430797 Msa0157300:CDS
ATGTAACCTCCTCTGATGAT+GGG 0.543378 1_4:+24434518 Msa0157300:three_prime_UTR
CTCAAGCCATATTCAAGATG+TGG 0.544153 1_4:+24433036 Msa0157300:CDS
AAGAATAGGCAAAAGGTTGG+TGG 0.546393 1_4:+24431342 Msa0157300:CDS
GACGAGCATGGTCTCCAGGT+TGG 0.548035 1_4:+24431262 Msa0157300:CDS
GTTGGCATTCTCGCCAACTC+AGG 0.548803 1_4:-24432894 None:intergenic
TTGAAGCCTAGATATAATAT+GGG 0.550311 1_4:+24429967 Msa0157300:exon
GTGGTGCATTCCAAGGATGA+TGG 0.551180 1_4:-24432926 None:intergenic
AAGGCAATGGCTACCTGAGT+TGG 0.551193 1_4:+24432881 Msa0157300:CDS
CAATAACATGCAGTGTATGT+AGG 0.551922 1_4:-24429381 None:intergenic
TTGAATGTGATATCCTCGGC+TGG 0.555532 1_4:+24431811 Msa0157300:CDS
AGGTTGGAGCAATGCTGACA+AGG 0.556873 1_4:+24431278 Msa0157300:CDS
TGCTACTGGATTTATAGATA+AGG 0.557884 1_4:-24433823 None:intergenic
TTGGGAAGTATATGATGAGA+AGG 0.559387 1_4:+24430816 Msa0157300:CDS
ACTTGGAGACAAGGTAGGAC+TGG 0.559715 1_4:+24431630 Msa0157300:CDS
TACTTCATTCCCCATTTCCA+AGG 0.559892 1_4:-24431759 None:intergenic
AGAGCATCAGGAGTCGAGCT+AGG 0.561014 1_4:+24432960 Msa0157300:CDS
TTCTCATCATATACTTCCCA+AGG 0.561654 1_4:-24430814 None:intergenic
TGAGCGCTTGGATGATCCTG+AGG 0.562126 1_4:+24431872 Msa0157300:CDS
TTAATGTGCATACCTTCAGC+AGG 0.564087 1_4:-24430931 None:intergenic
GGATCTAGGTTTGATCCAGA+AGG 0.564228 1_4:+24432849 Msa0157300:CDS
CTGTTTCGCTTATTCCACCT+TGG 0.564355 1_4:+24430899 Msa0157300:CDS
GCAAGGAAGAGTTCCCATCA+AGG 0.565323 1_4:+24434392 Msa0157300:three_prime_UTR
GTTTATATGGTGTCCTAAAG+AGG 0.569764 1_4:+24430086 Msa0157300:CDS
ACACTAAGTGGTGCATTCCA+AGG 0.571610 1_4:-24432933 None:intergenic
TGGCAATTAATTCCTGCTGA+AGG 0.571990 1_4:+24430919 Msa0157300:CDS
TTGCTTCTACCTTGGAAATG+GGG 0.574156 1_4:+24431750 Msa0157300:CDS
GACCTTGAATGTGATATCCT+CGG 0.577392 1_4:+24431807 Msa0157300:CDS
AGCTAATGATCAGAAAGTGC+CGG 0.577971 1_4:+24433184 Msa0157300:CDS
CTCGCATAAAGCAGATATTG+TGG 0.579056 1_4:+24431436 Msa0157300:CDS
CCAATGATGAGTTCCCATCA+AGG 0.579073 1_4:-24434310 None:intergenic
AAACTTGTGAAAGGGACATG+TGG 0.579526 1_4:+24429661 Msa0157300:five_prime_UTR
TCAAGCCATATTCAAGATGT+GGG 0.581508 1_4:+24433037 Msa0157300:CDS
TACATAGTCAAAGTCTACAT+TGG 0.582002 1_4:+24434241 Msa0157300:three_prime_UTR
AGCTTGCTATGGAAATTCTA+GGG 0.582029 1_4:+24434551 Msa0157300:three_prime_UTR
TAGCAAAGTAGTATGCAAGT+TGG 0.582266 1_4:+24429717 Msa0157300:five_prime_UTR
GAAGATGAGGAACATTGTTG+TGG 0.582759 1_4:-24433404 None:intergenic
CTTTGTAAACCCATCATCAG+AGG 0.583687 1_4:-24434527 None:intergenic
AAGGAGAATATGTAAGGCAA+TGG 0.584996 1_4:+24432868 Msa0157300:CDS
CAGATATTGTGGGGAAACGA+AGG 0.585311 1_4:+24431447 Msa0157300:CDS
CAAGAGATCCATGCAGTGGA+GGG 0.587364 1_4:+24434770 Msa0157300:three_prime_UTR
GAGAACTTTGGGCTACAGGA+TGG 0.589010 1_4:+24431679 Msa0157300:CDS
GGATGATGGATCCACTCAGT+TGG 0.589489 1_4:-24432912 None:intergenic
TCCAAGAATAGGCAAAAGGT+TGG 0.591255 1_4:+24431339 Msa0157300:CDS
AGTGCTCTCTCATGAGTGAA+CGG 0.592898 1_4:-24431555 None:intergenic
ATCAGAGGAGGTTACATCCA+AGG 0.595406 1_4:-24434512 None:intergenic
TCACAGCCTGAAAGGGTGCA+AGG 0.598339 1_4:+24434375 Msa0157300:three_prime_UTR
AAGTAAATAATATACAATGT+TGG 0.599908 1_4:-24433943 None:intergenic
GATGCTCTAAGCACACTAAG+TGG 0.600085 1_4:-24432945 None:intergenic
GGAAACGAAGGCAACAGTGT+TGG 0.600244 1_4:+24431459 Msa0157300:CDS
ATACTACTTTGCTATCTGGA+AGG 0.601501 1_4:-24429708 None:intergenic
CTGAGATATACTGCCAGCCG+AGG 0.601742 1_4:-24431824 None:intergenic
GTAGTGTCCCTATAGATTGG+TGG 0.603110 1_4:+24434451 Msa0157300:three_prime_UTR
TTTGACGGATCAGCATTCCA+AGG 0.608296 1_4:-24431600 None:intergenic
TCAAGACTTGGAGACAAGGT+AGG 0.609400 1_4:+24431625 Msa0157300:CDS
TCAGCAGGAATTAATTGCCA+AGG 0.610860 1_4:-24430916 None:intergenic
TTTCATGCAGGGGCGACAGG+AGG 0.611889 1_4:+24433790 Msa0157300:intron
ATATGGTGTCCTAAAGAGGA+AGG 0.616143 1_4:+24430090 Msa0157300:CDS
TTAGGACACCATATAAACAC+AGG 0.616586 1_4:-24430081 None:intergenic
TTGACGGATCAGCATTCCAA+GGG 0.619378 1_4:-24431599 None:intergenic
AACTTCAAGACTTGGAGACA+AGG 0.622090 1_4:+24431621 Msa0157300:CDS
CGCATAAAGCAGATATTGTG+GGG 0.626353 1_4:+24431438 Msa0157300:CDS
AGCACTACTTACCATAGAGA+TGG 0.626546 1_4:-24430284 None:intergenic
CAACATCAAAGAAAAGCTAG+TGG 0.627181 1_4:+24430744 Msa0157300:CDS
ATCTCAGGATGCTTACCAGA+CGG 0.628095 1_4:+24431840 Msa0157300:CDS
TGTAAACCCATCATCAGAGG+AGG 0.632539 1_4:-24434524 None:intergenic
TTCTCACTAGGCATAAGTCA+TGG 0.633959 1_4:+24434044 Msa0157300:three_prime_UTR
ATCAGTGAAAAGCTATAATG+GGG 0.635939 1_4:+24430777 Msa0157300:CDS
GTCCCTTCTAAACCAAACAA+TGG 0.637331 1_4:-24430001 None:intergenic
GTTCACAAGTGTTTATCACC+GGG 0.640346 1_4:-24434593 None:intergenic
TTAAATGTAATCATATATGT+CGG 0.641334 1_4:+24434156 Msa0157300:three_prime_UTR
GGATCTCTTGTTGTAAACGT+TGG 0.641567 1_4:-24434757 None:intergenic
ACGCGTTACTAGGACGAGCA+TGG 0.642349 1_4:+24431250 Msa0157300:CDS
GCAGGAATTAATTGCCAAGG+TGG 0.644364 1_4:-24430913 None:intergenic
AATGTAATCATATATGTCGG+TGG 0.647016 1_4:+24434159 Msa0157300:three_prime_UTR
GTGGAGAAGATCACATGTCA+AGG 0.648414 1_4:-24429293 None:intergenic
ACAAGAGATCCATGCAGTGG+AGG 0.649604 1_4:+24434769 Msa0157300:three_prime_UTR
TTAGCTGAAATAGTAGCAGA+CGG 0.651586 1_4:-24433167 None:intergenic
AACTTGTGAAAGGGACATGT+GGG 0.652408 1_4:+24429662 Msa0157300:five_prime_UTR
TGGGAAGTATATGATGAGAA+GGG 0.652926 1_4:+24430817 Msa0157300:CDS
TGGCGAGAATGCCAACTGAG+TGG 0.660213 1_4:+24432901 Msa0157300:CDS
ATTTCGGAGAGTTGAGTGTG+AGG 0.666895 1_4:+24431397 Msa0157300:CDS
ACAACAAGAGATCCATGCAG+TGG 0.685539 1_4:+24434766 Msa0157300:three_prime_UTR
CTCTCCGAAATGGAGATACG+GGG 0.691586 1_4:-24431385 None:intergenic
ATCCAGGAAGAGTTTCAAGG+TGG 0.698355 1_4:+24430121 Msa0157300:CDS
ATATGATTGAGTGTGTGTGA+AGG 0.700592 1_4:-24429339 None:intergenic
ATACGGGGATAACAGCGAGG+TGG 0.704873 1_4:-24431370 None:intergenic
GACGATAAATTATTCTCACT+AGG 0.709024 1_4:+24434032 Msa0157300:three_prime_UTR
TAGGACACCATATAAACACA+GGG 0.720737 1_4:-24430080 None:intergenic
GAGATACGGGGATAACAGCG+AGG 0.744456 1_4:-24431373 None:intergenic
ATTAGTGTATGATGATCACG+TGG 0.765451 1_4:-24429312 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTATGTTTCTAAATTA+GGG + chr1_4:24429596-24429615 Msa0157300:five_prime_UTR 10.0%
!! AAAATACACAAAAAAAAATA+TGG - chr1_4:24429626-24429645 None:intergenic 10.0%
!!! GTTAATTATGTTTCTAAATT+AGG + chr1_4:24429595-24429614 Msa0157300:five_prime_UTR 15.0%
!!! TTCATTTATAGTATAGTTTT+TGG + chr1_4:24430970-24430989 Msa0157300:intron 15.0%
!! TGAATAAATTATTGAATACA+GGG - chr1_4:24431950-24431969 None:intergenic 15.0%
!! TTGAATAAATTATTGAATAC+AGG - chr1_4:24431951-24431970 None:intergenic 15.0%
!! GCTTATAACATATATTAAAA+TGG - chr1_4:24432531-24432550 None:intergenic 15.0%
!! AAGTAAATAATATACAATGT+TGG - chr1_4:24433946-24433965 None:intergenic 15.0%
!! TTAAATGTAATCATATATGT+CGG + chr1_4:24434156-24434175 Msa0157300:three_prime_UTR 15.0%
!! ATAAGTATTAAGAATAAGAT+TGG - chr1_4:24434349-24434368 None:intergenic 15.0%
!!! CTTATCTAAGTTGAAAATAA+GGG - chr1_4:24429444-24429463 None:intergenic 20.0%
!!! TCTTATCTAAGTTGAAAATA+AGG - chr1_4:24429445-24429464 None:intergenic 20.0%
!! AAAATTGATACACTAAAAAC+TGG - chr1_4:24429868-24429887 None:intergenic 20.0%
!!! AAACCATTTTTAAACTTTTG+AGG + chr1_4:24429916-24429935 Msa0157300:five_prime_UTR 20.0%
!!! TTTGGTTACACTTAATATTT+TGG + chr1_4:24430383-24430402 Msa0157300:intron 20.0%
!!! TTTTTCTATTAGTAACATAG+AGG + chr1_4:24430435-24430454 Msa0157300:intron 20.0%
!! TTGTTGTATCATAATAACTA+TGG - chr1_4:24431134-24431153 None:intergenic 20.0%
!!! TAGATAATAGCTTTTATATC+TGG + chr1_4:24432126-24432145 Msa0157300:intron 20.0%
!! TAAAATTTCAAAGTACAAAC+TGG - chr1_4:24432253-24432272 None:intergenic 20.0%
!!! TATAGGAAACAAGTTTTATT+AGG + chr1_4:24432729-24432748 Msa0157300:intron 20.0%
!! TCTATATCAATTATTGGATT+CGG - chr1_4:24432996-24433015 None:intergenic 20.0%
!! TCCAATAATTGATATAGATA+TGG + chr1_4:24432998-24433017 Msa0157300:CDS 20.0%
!!! ATCCTTAGGTTTATTTTTTT+AGG + chr1_4:24433607-24433626 Msa0157300:intron 20.0%
!!! TCCTTAGGTTTATTTTTTTA+GGG + chr1_4:24433608-24433627 Msa0157300:intron 20.0%
!! CAAGACTATCAAAATATTTA+AGG - chr1_4:24433984-24434003 None:intergenic 20.0%
! CCAAAATCTTATCAAAGAAA+AGG - chr1_4:24429410-24429429 None:intergenic 25.0%
!! CCTTTTCTTTGATAAGATTT+TGG + chr1_4:24429407-24429426 Msa0157300:five_prime_UTR 25.0%
! ATAAGCTATAAGTACTTGTT+AGG + chr1_4:24429748-24429767 Msa0157300:five_prime_UTR 25.0%
! TCACCTCAAAAGTTTAAAAA+TGG - chr1_4:24429922-24429941 None:intergenic 25.0%
!! TTTGAAGCCTAGATATAATA+TGG + chr1_4:24429966-24429985 Msa0157300:exon 25.0%
! TTGAAGCCTAGATATAATAT+GGG + chr1_4:24429967-24429986 Msa0157300:exon 25.0%
!!! GATTTGATTTGATTCATGTT+TGG + chr1_4:24430365-24430384 Msa0157300:intron 25.0%
! ATGTTACTAATAGAAAAAGC+CGG - chr1_4:24430433-24430452 None:intergenic 25.0%
! TTATCAGTGAAAAGCTATAA+TGG + chr1_4:24430775-24430794 Msa0157300:CDS 25.0%
! TATCAGTGAAAAGCTATAAT+GGG + chr1_4:24430776-24430795 Msa0157300:CDS 25.0%
!!! TATAGTTTTTGGTTCTACAT+TGG + chr1_4:24430981-24431000 Msa0157300:intron 25.0%
!! AAAAGATGATACTTTCGTTT+TGG - chr1_4:24431097-24431116 None:intergenic 25.0%
! AAATGTTCAATAGAGGATTT+AGG + chr1_4:24431198-24431217 Msa0157300:CDS 25.0%
! TTGAAACTATAACTCTGATT+CGG - chr1_4:24431713-24431732 None:intergenic 25.0%
! ATAAATTATTGAATACAGGG+TGG - chr1_4:24431947-24431966 None:intergenic 25.0%
! CAAATTAGATATTTAACGAG+CGG - chr1_4:24432181-24432200 None:intergenic 25.0%
!!! TTGCTTTTAACACAGATTAT+TGG + chr1_4:24432198-24432217 Msa0157300:intron 25.0%
! TAAGTTCGTTTATTCAAACA+GGG - chr1_4:24432423-24432442 None:intergenic 25.0%
!!! GGTATTACTTTTTCGTATAT+AGG + chr1_4:24432712-24432731 Msa0157300:intron 25.0%
! GCCATATCTATATCAATTAT+TGG - chr1_4:24433002-24433021 None:intergenic 25.0%
! TCCCTAAAAAAATAAACCTA+AGG - chr1_4:24433612-24433631 None:intergenic 25.0%
!! AAGAATTTTCATTTTCATGC+AGG + chr1_4:24433778-24433797 Msa0157300:intron 25.0%
!! AGAATTTTCATTTTCATGCA+GGG + chr1_4:24433779-24433798 Msa0157300:intron 25.0%
! TGGCTATATTCTCAATAAAA+TGG + chr1_4:24433896-24433915 Msa0157300:three_prime_UTR 25.0%
! ATATTTAAGGACTTCTCATT+CGG - chr1_4:24433971-24433990 None:intergenic 25.0%
!! CATTTTCGTATATGAAGTAT+CGG + chr1_4:24434215-24434234 Msa0157300:three_prime_UTR 25.0%
! TTGGCACATTATTATACAAA+AGG - chr1_4:24434418-24434437 None:intergenic 25.0%
!!! CTATATTTTTGGATAAAACC+CGG + chr1_4:24434575-24434594 Msa0157300:three_prime_UTR 25.0%
CAAACTTGAGAACTAAGATA+AGG - chr1_4:24429509-24429528 None:intergenic 30.0%
TTGCTACCCATATTATATCT+AGG - chr1_4:24429976-24429995 None:intergenic 30.0%
! AACCATTGTTTGGTTTAGAA+GGG + chr1_4:24429999-24430018 Msa0157300:CDS 30.0%
TAAAATTGTCCTTCCTCTTT+AGG - chr1_4:24430102-24430121 None:intergenic 30.0%
GTAAAATGCTGGATTCTTAT+TGG + chr1_4:24430528-24430547 Msa0157300:intron 30.0%
GAACTGTAAAGAAACATATC+AGG - chr1_4:24430652-24430671 None:intergenic 30.0%
ACAATCATGGTACAAAATGT+TGG - chr1_4:24430691-24430710 None:intergenic 30.0%
AGGATCTGATAAAACAATCA+TGG - chr1_4:24430704-24430723 None:intergenic 30.0%
ATCAGTGAAAAGCTATAATG+GGG + chr1_4:24430777-24430796 Msa0157300:CDS 30.0%
AGTAAGTTAGTAGTTGTGTT+GGG - chr1_4:24431061-24431080 None:intergenic 30.0%
TAGTAAGTTAGTAGTTGTGT+TGG - chr1_4:24431062-24431081 None:intergenic 30.0%
!! ATGATACTTTCGTTTTGGAT+AGG - chr1_4:24431092-24431111 None:intergenic 30.0%
AGTCAAGAAATGTTCAATAG+AGG + chr1_4:24431191-24431210 Msa0157300:CDS 30.0%
! CAAGGCTTTAACAGAATTTA+TGG + chr1_4:24431296-24431315 Msa0157300:CDS 30.0%
!! TGTGAGGAAAGTTTTTCAAA+TGG + chr1_4:24431413-24431432 Msa0157300:CDS 30.0%
TCCAATCAACTGCATAAATT+TGG + chr1_4:24432088-24432107 Msa0157300:intron 30.0%
ACCAAATTTATGCAGTTGAT+TGG - chr1_4:24432092-24432111 None:intergenic 30.0%
CAACTATTATAGTCATGCTA+AGG - chr1_4:24432363-24432382 None:intergenic 30.0%
GTAAGTTCGTTTATTCAAAC+AGG - chr1_4:24432424-24432443 None:intergenic 30.0%
!! GCTATTTTCGTAAACTATCT+TGG + chr1_4:24432549-24432568 Msa0157300:intron 30.0%
AAACTATCTTGGAGATCTTA+TGG + chr1_4:24432560-24432579 Msa0157300:intron 30.0%
! AATGAACAGATAACAGCTTT+TGG + chr1_4:24432584-24432603 Msa0157300:intron 30.0%
AGTAATACCAATCTCACTTA+GGG - chr1_4:24432701-24432720 None:intergenic 30.0%
AAGTAATACCAATCTCACTT+AGG - chr1_4:24432702-24432721 None:intergenic 30.0%
!! GTTTTATTAGGTTTGTTCGT+TGG + chr1_4:24432741-24432760 Msa0157300:intron 30.0%
! TAGCGTGATTTCTCTAATTT+TGG + chr1_4:24432803-24432822 Msa0157300:intron 30.0%
! TCATTGTTTGTCCAGATTTT+AGG + chr1_4:24432828-24432847 Msa0157300:intron 30.0%
AATTTCCCACATCTTGAATA+TGG - chr1_4:24433045-24433064 None:intergenic 30.0%
CTAATAGGTAGTTCATTCTT+AGG - chr1_4:24433221-24433240 None:intergenic 30.0%
CTAAGAATGAACTACCTATT+AGG + chr1_4:24433219-24433238 Msa0157300:CDS 30.0%
! CATTTTGTTCTCTTCCTAAT+AGG - chr1_4:24433236-24433255 None:intergenic 30.0%
ACTATCTTTCACATGATTCA+CGG - chr1_4:24433291-24433310 None:intergenic 30.0%
TTGTGGAACAGAAAATGAAT+AGG - chr1_4:24433390-24433409 None:intergenic 30.0%
! CCATTTTAGATTTGAAGATG+AGG - chr1_4:24433420-24433439 None:intergenic 30.0%
CCTCATCTTCAAATCTAAAA+TGG + chr1_4:24433417-24433436 Msa0157300:intron 30.0%
!! AGTTACTTCTATTTTTCTCG+TGG - chr1_4:24433552-24433571 None:intergenic 30.0%
ACCTAAGGATTAAATTGTCT+CGG - chr1_4:24433597-24433616 None:intergenic 30.0%
! AAGAGTGAAGACTCATTTTA+GGG - chr1_4:24433496-24433515 None:intergenic 30.0%
! AAAGAGTGAAGACTCATTTT+AGG - chr1_4:24433662-24433681 None:intergenic 30.0%
ATCACTGTGTTTCATAATGA+GGG + chr1_4:24433702-24433721 Msa0157300:intron 30.0%
!!! CACTCTTTTTTACACTTTGT+TGG + chr1_4:24433735-24433754 Msa0157300:intron 30.0%
! GAATTTTCATTTTCATGCAG+GGG + chr1_4:24433780-24433799 Msa0157300:intron 30.0%
TGCTACTGGATTTATAGATA+AGG - chr1_4:24433826-24433845 None:intergenic 30.0%
CACAGAAAACAGTTCATTTA+TGG - chr1_4:24433878-24433897 None:intergenic 30.0%
! CATAAATGAACTGTTTTCTG+TGG + chr1_4:24433876-24433895 Msa0157300:three_prime_UTR 30.0%
!! TCGTCTACTAGATTAGTTTA+TGG - chr1_4:24434017-24434036 None:intergenic 30.0%
GACGATAAATTATTCTCACT+AGG + chr1_4:24434032-24434051 Msa0157300:three_prime_UTR 30.0%
ATATGCATCAAGTTCCAAAA+AGG - chr1_4:24434078-24434097 None:intergenic 30.0%
AATGTAATCATATATGTCGG+TGG + chr1_4:24434159-24434178 Msa0157300:three_prime_UTR 30.0%
TACATAGTCAAAGTCTACAT+TGG + chr1_4:24434241-24434260 Msa0157300:three_prime_UTR 30.0%
!! ATTTTATTTCACAGCCTGAA+AGG + chr1_4:24434367-24434386 Msa0157300:three_prime_UTR 30.0%
!! TTTTATTTCACAGCCTGAAA+GGG + chr1_4:24434368-24434387 Msa0157300:three_prime_UTR 30.0%
ATTATACAAAAGGCCTTGAT+GGG - chr1_4:24434408-24434427 None:intergenic 30.0%
TATTATACAAAAGGCCTTGA+TGG - chr1_4:24434409-24434428 None:intergenic 30.0%
AGAAAATCCACCAATCTATA+GGG - chr1_4:24434461-24434480 None:intergenic 30.0%
AAGAAAATCCACCAATCTAT+AGG - chr1_4:24434462-24434481 None:intergenic 30.0%
TCTGATAGCAATTCCTTTAT+TGG + chr1_4:24434481-24434500 Msa0157300:three_prime_UTR 30.0%
!!! AATTCTAGGGCCTATATTTT+TGG + chr1_4:24434564-24434583 Msa0157300:three_prime_UTR 30.0%
!! CGGGTTTTATCCAAAAATAT+AGG - chr1_4:24434577-24434596 None:intergenic 30.0%
!! TCATTTGTTATAAGCTGCAA+AGG + chr1_4:24434619-24434638 Msa0157300:intron 30.0%
ATTAGTGTATGATGATCACG+TGG - chr1_4:24429315-24429334 None:intergenic 35.0%
ATATGATTGAGTGTGTGTGA+AGG - chr1_4:24429342-24429361 None:intergenic 35.0%
TGTATGTAGGAATGGAAGAT+AGG - chr1_4:24429371-24429390 None:intergenic 35.0%
CAATAACATGCAGTGTATGT+AGG - chr1_4:24429384-24429403 None:intergenic 35.0%
ATGCCTTCAAACTTGTGAAA+GGG + chr1_4:24429653-24429672 Msa0157300:five_prime_UTR 35.0%
! ATACTACTTTGCTATCTGGA+AGG - chr1_4:24429711-24429730 None:intergenic 35.0%
! TTGCATACTACTTTGCTATC+TGG - chr1_4:24429715-24429734 None:intergenic 35.0%
TAGCAAAGTAGTATGCAAGT+TGG + chr1_4:24429717-24429736 Msa0157300:five_prime_UTR 35.0%
! CTATTTTCAGCAGTGATTTG+AGG + chr1_4:24429772-24429791 Msa0157300:five_prime_UTR 35.0%
TAAAAACTGGCTACAAAGGT+TGG - chr1_4:24429855-24429874 None:intergenic 35.0%
ACACTAAAAACTGGCTACAA+AGG - chr1_4:24429859-24429878 None:intergenic 35.0%
GTAGCAATAGAACCATTGTT+TGG + chr1_4:24429989-24430008 Msa0157300:CDS 35.0%
! GAACCATTGTTTGGTTTAGA+AGG + chr1_4:24429998-24430017 Msa0157300:CDS 35.0%
CTGTATTCCCTGTGTTTATA+TGG + chr1_4:24430073-24430092 Msa0157300:CDS 35.0%
TAGGACACCATATAAACACA+GGG - chr1_4:24430083-24430102 None:intergenic 35.0%
TTAGGACACCATATAAACAC+AGG - chr1_4:24430084-24430103 None:intergenic 35.0%
GTTTATATGGTGTCCTAAAG+AGG + chr1_4:24430086-24430105 Msa0157300:CDS 35.0%
TTTATCCAGGAAGAGTTTCA+AGG + chr1_4:24430118-24430137 Msa0157300:CDS 35.0%
GTTGTGTTTAACCATCTCTA+TGG + chr1_4:24430273-24430292 Msa0157300:CDS 35.0%
!! TGGTAAGTAGTGCTGTTTAT+AGG + chr1_4:24430293-24430312 Msa0157300:intron 35.0%
CAAAAGTTGAAGAATCAAGC+CGG + chr1_4:24430411-24430430 Msa0157300:intron 35.0%
GTTATGTGTGGCAAAATGAA+GGG - chr1_4:24430507-24430526 None:intergenic 35.0%
AGTTATGTGTGGCAAAATGA+AGG - chr1_4:24430508-24430527 None:intergenic 35.0%
! CAGCATTTTACAGTTATGTG+TGG - chr1_4:24430519-24430538 None:intergenic 35.0%
CACACATAACTGTAAAATGC+TGG + chr1_4:24430517-24430536 Msa0157300:intron 35.0%
TTTATCAGATCCTGTTTCAC+TGG + chr1_4:24430711-24430730 Msa0157300:intron 35.0%
!! CTAGCTTTTCTTTGATGTTG+TGG - chr1_4:24430744-24430763 None:intergenic 35.0%
CAACATCAAAGAAAAGCTAG+TGG + chr1_4:24430744-24430763 Msa0157300:CDS 35.0%
AAAGAAAAGCTAGTGGAACT+TGG + chr1_4:24430751-24430770 Msa0157300:CDS 35.0%
TTCTCATCATATACTTCCCA+AGG - chr1_4:24430817-24430836 None:intergenic 35.0%
! TTGGGAAGTATATGATGAGA+AGG + chr1_4:24430816-24430835 Msa0157300:CDS 35.0%
! TGGGAAGTATATGATGAGAA+GGG + chr1_4:24430817-24430836 Msa0157300:CDS 35.0%
! TTACAACCTTCGATCCTTTT+TGG + chr1_4:24430848-24430867 Msa0157300:CDS 35.0%
!! TTCTACATTGGTAGCTTTGT+TGG + chr1_4:24430993-24431012 Msa0157300:intron 35.0%
TACTTCACTACTCCAAGAAT+AGG + chr1_4:24431328-24431347 Msa0157300:CDS 35.0%
TCGCATAAAGCAGATATTGT+GGG + chr1_4:24431437-24431456 Msa0157300:CDS 35.0%
TCATTCCTGCATCAACTAAA+GGG - chr1_4:24431659-24431678 None:intergenic 35.0%
! TGAAAATGTTGCTTCTACCT+TGG + chr1_4:24431742-24431761 Msa0157300:CDS 35.0%
! AATGGGGAATGAAGTATTTC+TGG + chr1_4:24431766-24431785 Msa0157300:CDS 35.0%
! ATGGGGAATGAAGTATTTCT+GGG + chr1_4:24431767-24431786 Msa0157300:CDS 35.0%
AAAAATTGGCACATGAGGAT+GGG - chr1_4:24432049-24432068 None:intergenic 35.0%
ATCTCAAAAATTGGCACATG+AGG - chr1_4:24432054-24432073 None:intergenic 35.0%
!!! ATGTGCCAATTTTTGAGATC+TGG + chr1_4:24432055-24432074 Msa0157300:intron 35.0%
!!! TGTGCCAATTTTTGAGATCT+GGG + chr1_4:24432056-24432075 Msa0157300:intron 35.0%
GCGGTGAAGTTTAATATGAA+AGG - chr1_4:24432162-24432181 None:intergenic 35.0%
AGATTGTTTGGGAGAGATTT+CGG - chr1_4:24432628-24432647 None:intergenic 35.0%
AAGCACTTGTGAGATTGTTT+GGG - chr1_4:24432639-24432658 None:intergenic 35.0%
TAAGCACTTGTGAGATTGTT+TGG - chr1_4:24432640-24432659 None:intergenic 35.0%
!! TCTTGTTGTGAGGATCTTTT+TGG - chr1_4:24432778-24432797 None:intergenic 35.0%
!!! TTGTCCAGATTTTAGGATCT+AGG + chr1_4:24432835-24432854 Msa0157300:intron 35.0%
CAAACCTAGATCCTAAAATC+TGG - chr1_4:24432842-24432861 None:intergenic 35.0%
ATCCAGAAGGAGAATATGTA+AGG + chr1_4:24432862-24432881 Msa0157300:CDS 35.0%
AAGGAGAATATGTAAGGCAA+TGG + chr1_4:24432868-24432887 Msa0157300:CDS 35.0%
TCAAGCCATATTCAAGATGT+GGG + chr1_4:24433037-24433056 Msa0157300:CDS 35.0%
TTAGCTGAAATAGTAGCAGA+CGG - chr1_4:24433170-24433189 None:intergenic 35.0%
TGAAGAGAAGAGAAAGAACA+AGG + chr1_4:24433259-24433278 Msa0157300:CDS 35.0%
! CTTCAAATCTAAAATGGCCA+TGG + chr1_4:24433423-24433442 Msa0157300:intron 35.0%
!! GTCTCGGTTTATTTTCTTCA+TGG - chr1_4:24433581-24433600 None:intergenic 35.0%
ACCGAGACAATTTAATCCTT+AGG + chr1_4:24433593-24433612 Msa0157300:intron 35.0%
!!! GAAGTTGCGTTATTTTTCTC+AGG + chr1_4:24433635-24433654 Msa0157300:intron 35.0%
TCTTCACTCTTTACCATCAT+AGG + chr1_4:24433670-24433689 Msa0157300:intron 35.0%
TGATGTAGAAAGTCCTATGA+TGG - chr1_4:24433686-24433705 None:intergenic 35.0%
CATCACTGTGTTTCATAATG+AGG + chr1_4:24433701-24433720 Msa0157300:intron 35.0%
! TCATGGTGCTTTTACCTTTT+TGG + chr1_4:24434061-24434080 Msa0157300:three_prime_UTR 35.0%
TTGGAACTTGATGCATATGA+AGG + chr1_4:24434080-24434099 Msa0157300:three_prime_UTR 35.0%
GACATGTATACATGCTAGAA+AGG + chr1_4:24434123-24434142 Msa0157300:three_prime_UTR 35.0%
ATTCCTTTATTGAGCCTTGA+TGG + chr1_4:24434296-24434315 Msa0157300:three_prime_UTR 35.0%
TTCCTTTATTGAGCCTTGAT+GGG + chr1_4:24434297-24434316 Msa0157300:three_prime_UTR 35.0%
! CACTACTTTGAAAGAAGTCT+TGG - chr1_4:24434437-24434456 None:intergenic 35.0%
AAAGTAGTGTCCCTATAGAT+TGG + chr1_4:24434448-24434467 Msa0157300:three_prime_UTR 35.0%
!! GTTTACAAAGAAGCTTGCTA+TGG + chr1_4:24434540-24434559 Msa0157300:three_prime_UTR 35.0%
!! AAGCTTGCTATGGAAATTCT+AGG + chr1_4:24434550-24434569 Msa0157300:three_prime_UTR 35.0%
!! AGCTTGCTATGGAAATTCTA+GGG + chr1_4:24434551-24434570 Msa0157300:three_prime_UTR 35.0%
TGTTCACAAGTGTTTATCAC+CGG - chr1_4:24434597-24434616 None:intergenic 35.0%
AGATCACATGTCAAGGAGAA+AGG - chr1_4:24429289-24429308 None:intergenic 40.0%
ACATGCAGTGTATGTAGGAA+TGG - chr1_4:24429379-24429398 None:intergenic 40.0%
GATGCCTTCAAACTTGTGAA+AGG + chr1_4:24429652-24429671 Msa0157300:five_prime_UTR 40.0%
TGTCCCTTTCACAAGTTTGA+AGG - chr1_4:24429659-24429678 None:intergenic 40.0%
AAACTTGTGAAAGGGACATG+TGG + chr1_4:24429661-24429680 Msa0157300:five_prime_UTR 40.0%
AACTTGTGAAAGGGACATGT+GGG + chr1_4:24429662-24429681 Msa0157300:five_prime_UTR 40.0%
GTCCCTTCTAAACCAAACAA+TGG - chr1_4:24430004-24430023 None:intergenic 40.0%
TAGAAGGGACCTTAGAATTG+AGG + chr1_4:24430014-24430033 Msa0157300:CDS 40.0%
CTGGATTGTCCTCAATTCTA+AGG - chr1_4:24430026-24430045 None:intergenic 40.0%
ATATGGTGTCCTAAAGAGGA+AGG + chr1_4:24430090-24430109 Msa0157300:CDS 40.0%
! GAGGAAGGACAATTTTATCC+AGG + chr1_4:24430105-24430124 Msa0157300:CDS 40.0%
! GAAGCAGTCTTTAGTTCACT+TGG + chr1_4:24430149-24430168 Msa0157300:CDS 40.0%
GATCAGTCCTTGAAATCACT+TGG + chr1_4:24430171-24430190 Msa0157300:CDS 40.0%
TCTCGAACCAAGTGATTTCA+AGG - chr1_4:24430181-24430200 None:intergenic 40.0%
AGCACTACTTACCATAGAGA+TGG - chr1_4:24430287-24430306 None:intergenic 40.0%
! CGGCTTGATTCTTCAACTTT+TGG - chr1_4:24430413-24430432 None:intergenic 40.0%
GCAAAATGAAGGGTTCTCAT+CGG - chr1_4:24430497-24430516 None:intergenic 40.0%
TCCAGTAACGTTAAGCGAAA+GGG - chr1_4:24430593-24430612 None:intergenic 40.0%
TTCCAGTAACGTTAAGCGAA+AGG - chr1_4:24430594-24430613 None:intergenic 40.0%
TCAGCAGGAATTAATTGCCA+AGG - chr1_4:24430919-24430938 None:intergenic 40.0%
TGGCAATTAATTCCTGCTGA+AGG + chr1_4:24430919-24430938 Msa0157300:CDS 40.0%
TTAATGTGCATACCTTCAGC+AGG - chr1_4:24430934-24430953 None:intergenic 40.0%
! CTGAAGGTATGCACATTAAC+AGG + chr1_4:24430935-24430954 Msa0157300:intron 40.0%
CCTCTGTCGTAAAACTTCTT+TGG - chr1_4:24431032-24431051 None:intergenic 40.0%
! CCAAAGAAGTTTTACGACAG+AGG + chr1_4:24431029-24431048 Msa0157300:intron 40.0%
! AGAAGTTTTACGACAGAGGT+CGG + chr1_4:24431033-24431052 Msa0157300:intron 40.0%
TCTCTTCTGCTGTGTATTAC+AGG + chr1_4:24431165-24431184 Msa0157300:intron 40.0%
CTACTCCAAGAATAGGCAAA+AGG + chr1_4:24431335-24431354 Msa0157300:CDS 40.0%
TCCAAGAATAGGCAAAAGGT+TGG + chr1_4:24431339-24431358 Msa0157300:CDS 40.0%
! ACCAACCTTTTGCCTATTCT+TGG - chr1_4:24431343-24431362 None:intergenic 40.0%
AAGAATAGGCAAAAGGTTGG+TGG + chr1_4:24431342-24431361 Msa0157300:CDS 40.0%
TTATCCCCGTATCTCCATTT+CGG + chr1_4:24431381-24431400 Msa0157300:CDS 40.0%
AACTCTCCGAAATGGAGATA+CGG - chr1_4:24431390-24431409 None:intergenic 40.0%
CTCGCATAAAGCAGATATTG+TGG + chr1_4:24431436-24431455 Msa0157300:CDS 40.0%
CGCATAAAGCAGATATTGTG+GGG + chr1_4:24431438-24431457 Msa0157300:CDS 40.0%
! GCTCTTTTCCTTAGAGCAAT+TGG + chr1_4:24431495-24431514 Msa0157300:CDS 40.0%
CTCTTAGTCCAATTGCTCTA+AGG - chr1_4:24431506-24431525 None:intergenic 40.0%
!!! GACACTTGAGTTTTTTCCCT+TGG + chr1_4:24431583-24431602 Msa0157300:CDS 40.0%
ATCCGTCAAACTTCAAGACT+TGG + chr1_4:24431613-24431632 Msa0157300:CDS 40.0%
CTCCAAGTCTTGAAGTTTGA+CGG - chr1_4:24431618-24431637 None:intergenic 40.0%
AACTTCAAGACTTGGAGACA+AGG + chr1_4:24431621-24431640 Msa0157300:CDS 40.0%
CTCATTCCTGCATCAACTAA+AGG - chr1_4:24431660-24431679 None:intergenic 40.0%
ATGCAGGAATGAGAGAACTT+TGG + chr1_4:24431667-24431686 Msa0157300:CDS 40.0%
TGCAGGAATGAGAGAACTTT+GGG + chr1_4:24431668-24431687 Msa0157300:CDS 40.0%
! TGTTGCTTCTACCTTGGAAA+TGG + chr1_4:24431748-24431767 Msa0157300:CDS 40.0%
GTTGCTTCTACCTTGGAAAT+GGG + chr1_4:24431749-24431768 Msa0157300:CDS 40.0%
TTGCTTCTACCTTGGAAATG+GGG + chr1_4:24431750-24431769 Msa0157300:CDS 40.0%
TACTTCATTCCCCATTTCCA+AGG - chr1_4:24431762-24431781 None:intergenic 40.0%
GACCTTGAATGTGATATCCT+CGG + chr1_4:24431807-24431826 Msa0157300:CDS 40.0%
AGAAAAACGTGACAAACCTC+AGG - chr1_4:24431891-24431910 None:intergenic 40.0%
CAGAATGTGATGTGTGATAC+AGG - chr1_4:24431979-24431998 None:intergenic 40.0%
CAAAAATTGGCACATGAGGA+TGG - chr1_4:24432050-24432069 None:intergenic 40.0%
ACCACCCAGATCTCAAAAAT+TGG - chr1_4:24432063-24432082 None:intergenic 40.0%
CTTAGATGCATTTCCCTCTT+AGG + chr1_4:24432397-24432416 Msa0157300:intron 40.0%
TATTCAAACAGGGCCTAAGA+GGG - chr1_4:24432413-24432432 None:intergenic 40.0%
TTATTCAAACAGGGCCTAAG+AGG - chr1_4:24432414-24432433 None:intergenic 40.0%
! ACAGCTTTTGGACATGTCAT+AGG + chr1_4:24432596-24432615 Msa0157300:intron 40.0%
AATCTCACTTAGGGACTGTT+TGG - chr1_4:24432692-24432711 None:intergenic 40.0%
AAACAGTCCCTAAGTGAGAT+TGG + chr1_4:24432691-24432710 Msa0157300:intron 40.0%
! CGCTATTTACTCTTGTTGTG+AGG - chr1_4:24432788-24432807 None:intergenic 40.0%
TGCCTTACATATTCTCCTTC+TGG - chr1_4:24432867-24432886 None:intergenic 40.0%
TCTTGAATATGGCTTGAGTC+AGG - chr1_4:24433034-24433053 None:intergenic 40.0%
CTCAAGCCATATTCAAGATG+TGG + chr1_4:24433036-24433055 Msa0157300:CDS 40.0%
TCCAAAAGTTGTCCTCCTTA+AGG + chr1_4:24433136-24433155 Msa0157300:CDS 40.0%
! TCCTTAAGGAGGACAACTTT+TGG - chr1_4:24433140-24433159 None:intergenic 40.0%
! AGCTAATGATCAGAAAGTGC+CGG + chr1_4:24433184-24433203 Msa0157300:CDS 40.0%
TTCTTAGGATCCTGAAATGC+CGG - chr1_4:24433206-24433225 None:intergenic 40.0%
GAAGATGAGGAACATTGTTG+TGG - chr1_4:24433407-24433426 None:intergenic 40.0%
!! AGAGTGTCACAGTTTTTCTC+AGG - chr1_4:24433522-24433541 None:intergenic 40.0%
CAGTGCTCATGGAAAGAAAA+TGG + chr1_4:24433850-24433869 Msa0157300:three_prime_UTR 40.0%
TTCTCACTAGGCATAAGTCA+TGG + chr1_4:24434044-24434063 Msa0157300:three_prime_UTR 40.0%
TTCCCATCAAGGCTCAATAA+AGG - chr1_4:24434302-24434321 None:intergenic 40.0%
CAAGGTTGTTGCTCCAATAA+AGG - chr1_4:24434497-24434516 None:intergenic 40.0%
CTTTATTGGAGCAACAACCT+TGG + chr1_4:24434495-24434514 Msa0157300:three_prime_UTR 40.0%
ATGTAACCTCCTCTGATGAT+GGG + chr1_4:24434518-24434537 Msa0157300:three_prime_UTR 40.0%
CTTTGTAAACCCATCATCAG+AGG - chr1_4:24434530-24434549 None:intergenic 40.0%
GTTCACAAGTGTTTATCACC+GGG - chr1_4:24434596-24434615 None:intergenic 40.0%
!! AAACGTTGGTGATCTTATGC+AGG - chr1_4:24434746-24434765 None:intergenic 40.0%
! GGATCTCTTGTTGTAAACGT+TGG - chr1_4:24434760-24434779 None:intergenic 40.0%
GTGGAGAAGATCACATGTCA+AGG - chr1_4:24429296-24429315 None:intergenic 45.0%
ATCCAGGAAGAGTTTCAAGG+TGG + chr1_4:24430121-24430140 Msa0157300:CDS 45.0%
GAGTACTCTCAATGCTCTCT+TGG + chr1_4:24430221-24430240 Msa0157300:CDS 45.0%
CCAGTAACGTTAAGCGAAAG+GGG - chr1_4:24430592-24430611 None:intergenic 45.0%
GGATCTGTTGTATGAGCCTT+GGG + chr1_4:24430798-24430817 Msa0157300:CDS 45.0%
TCTCTGCCAAAAAGGATCGA+AGG - chr1_4:24430857-24430876 None:intergenic 45.0%
TGCAAGCATCTCTGCCAAAA+AGG - chr1_4:24430865-24430884 None:intergenic 45.0%
GAGATGCTTGCACAAGCAAA+TGG + chr1_4:24430873-24430892 Msa0157300:CDS 45.0%
CAAGGTGGAATAAGCGAAAC+AGG - chr1_4:24430901-24430920 None:intergenic 45.0%
CTGTTTCGCTTATTCCACCT+TGG + chr1_4:24430899-24430918 Msa0157300:CDS 45.0%
GCAGGAATTAATTGCCAAGG+TGG - chr1_4:24430916-24430935 None:intergenic 45.0%
AAACCAAGCAACGCGTTACT+AGG + chr1_4:24431240-24431259 Msa0157300:CDS 45.0%
ACTCTCCGAAATGGAGATAC+GGG - chr1_4:24431389-24431408 None:intergenic 45.0%
TCACACTCAACTCTCCGAAA+TGG - chr1_4:24431398-24431417 None:intergenic 45.0%
ATTTCGGAGAGTTGAGTGTG+AGG + chr1_4:24431397-24431416 Msa0157300:CDS 45.0%
CAGATATTGTGGGGAAACGA+AGG + chr1_4:24431447-24431466 Msa0157300:CDS 45.0%
AGTGCTCTCTCATGAGTGAA+CGG - chr1_4:24431558-24431577 None:intergenic 45.0%
!! ACTCATGAGAGAGCACTTCT+TGG + chr1_4:24431561-24431580 Msa0157300:CDS 45.0%
! TTGACGGATCAGCATTCCAA+GGG - chr1_4:24431602-24431621 None:intergenic 45.0%
! TTTGACGGATCAGCATTCCA+AGG - chr1_4:24431603-24431622 None:intergenic 45.0%
TCAAGACTTGGAGACAAGGT+AGG + chr1_4:24431625-24431644 Msa0157300:CDS 45.0%
ATGAGAGAACTTTGGGCTAC+AGG + chr1_4:24431675-24431694 Msa0157300:CDS 45.0%
!!! GTATTTCTGGGACACGCTTT+TGG + chr1_4:24431779-24431798 Msa0157300:CDS 45.0%
AGCCGAGGATATCACATTCA+AGG - chr1_4:24431812-24431831 None:intergenic 45.0%
TTGAATGTGATATCCTCGGC+TGG + chr1_4:24431811-24431830 Msa0157300:CDS 45.0%
ATCTCAGGATGCTTACCAGA+CGG + chr1_4:24431840-24431859 Msa0157300:CDS 45.0%
!!! GCCAATTTTTGAGATCTGGG+TGG + chr1_4:24432059-24432078 Msa0157300:intron 45.0%
CTCACAAGTGCTTATGTCAG+TGG + chr1_4:24432646-24432665 Msa0157300:intron 45.0%
CACTTAGGGACTGTTTGGAT+TGG - chr1_4:24432687-24432706 None:intergenic 45.0%
GGATCTAGGTTTGATCCAGA+AGG + chr1_4:24432849-24432868 Msa0157300:CDS 45.0%
ACACTAAGTGGTGCATTCCA+AGG - chr1_4:24432936-24432955 None:intergenic 45.0%
! GATGCTCTAAGCACACTAAG+TGG - chr1_4:24432948-24432967 None:intergenic 45.0%
! CTTAGTGTGCTTAGAGCATC+AGG + chr1_4:24432948-24432967 Msa0157300:CDS 45.0%
CAAGCAGCATCAAAAGCTTC+TGG + chr1_4:24433065-24433084 Msa0157300:CDS 45.0%
!! ACGGAGCTTTTTCCTTAAGG+AGG - chr1_4:24433151-24433170 None:intergenic 45.0%
!! CAGACGGAGCTTTTTCCTTA+AGG - chr1_4:24433154-24433173 None:intergenic 45.0%
CTGTAGAGCAAGTGTCTTCA+TGG - chr1_4:24433331-24433350 None:intergenic 45.0%
ATGTCTGTCTGTTCTTGCCA+TGG - chr1_4:24433443-24433462 None:intergenic 45.0%
ATGGCAAGAACAGACAGACA+TGG + chr1_4:24433442-24433461 Msa0157300:intron 45.0%
CCAATGATGAGTTCCCATCA+AGG - chr1_4:24434313-24434332 None:intergenic 45.0%
CCTTGATGGGAACTCATCAT+TGG + chr1_4:24434310-24434329 Msa0157300:three_prime_UTR 45.0%
GTAGTGTCCCTATAGATTGG+TGG + chr1_4:24434451-24434470 Msa0157300:three_prime_UTR 45.0%
ATCAGAGGAGGTTACATCCA+AGG - chr1_4:24434515-24434534 None:intergenic 45.0%
GATGTAACCTCCTCTGATGA+TGG + chr1_4:24434517-24434536 Msa0157300:three_prime_UTR 45.0%
TGTAAACCCATCATCAGAGG+AGG - chr1_4:24434527-24434546 None:intergenic 45.0%
ACAACAAGAGATCCATGCAG+TGG + chr1_4:24434766-24434785 Msa0157300:three_prime_UTR 45.0%
!!! CATGTGGGCTGAGTTGGTTT+TGG + chr1_4:24429677-24429696 Msa0157300:five_prime_UTR 50.0%
CACCACCTTGAAACTCTTCC+TGG - chr1_4:24430126-24430145 None:intergenic 50.0%
CAGGAAGAGTTTCAAGGTGG+TGG + chr1_4:24430124-24430143 Msa0157300:CDS 50.0%
CCCCTTTCGCTTAACGTTAC+TGG + chr1_4:24430589-24430608 Msa0157300:intron 50.0%
TGGTCTCGAACCAGTGAAAC+AGG - chr1_4:24430724-24430743 None:intergenic 50.0%
GGGATCTGTTGTATGAGCCT+TGG + chr1_4:24430797-24430816 Msa0157300:CDS 50.0%
TTGTCAGCATTGCTCCAACC+TGG - chr1_4:24431279-24431298 None:intergenic 50.0%
AGGTTGGAGCAATGCTGACA+AGG + chr1_4:24431278-24431297 Msa0157300:CDS 50.0%
CTCTCCGAAATGGAGATACG+GGG - chr1_4:24431388-24431407 None:intergenic 50.0%
GGAAACGAAGGCAACAGTGT+TGG + chr1_4:24431459-24431478 Msa0157300:CDS 50.0%
ACTTGGAGACAAGGTAGGAC+TGG + chr1_4:24431630-24431649 Msa0157300:CDS 50.0%
! GGCTACCCTTTAGTTGATGC+AGG + chr1_4:24431651-24431670 Msa0157300:CDS 50.0%
GAGAACTTTGGGCTACAGGA+TGG + chr1_4:24431679-24431698 Msa0157300:CDS 50.0%
AAGGCAATGGCTACCTGAGT+TGG + chr1_4:24432881-24432900 Msa0157300:CDS 50.0%
!! GGATGATGGATCCACTCAGT+TGG - chr1_4:24432915-24432934 None:intergenic 50.0%
CTGAGTGGATCCATCATCCT+TGG + chr1_4:24432916-24432935 Msa0157300:CDS 50.0%
GTGGTGCATTCCAAGGATGA+TGG - chr1_4:24432929-24432948 None:intergenic 50.0%
! GGCTTGAGTCAGGTTTTCTC+TGG - chr1_4:24433024-24433043 None:intergenic 50.0%
!! AAGCTTCTGGCTCTGAAGCA+AGG + chr1_4:24433078-24433097 Msa0157300:CDS 50.0%
!! AGCTTCTGGCTCTGAAGCAA+GGG + chr1_4:24433079-24433098 Msa0157300:CDS 50.0%
!! TCAGAAAGTGCCGGCATTTC+AGG + chr1_4:24433193-24433212 Msa0157300:CDS 50.0%
ACAGACATGGAGCAAAGCTC+AGG + chr1_4:24433455-24433474 Msa0157300:intron 50.0%
CAGACATGGAGCAAAGCTCA+GGG + chr1_4:24433456-24433475 Msa0157300:intron 50.0%
GAGCAAAGCTCAGGGAAAGA+TGG + chr1_4:24433464-24433483 Msa0157300:intron 50.0%
ACTCTTCCTTGCACCCTTTC+AGG - chr1_4:24434384-24434403 None:intergenic 50.0%
GCAAGGAAGAGTTCCCATCA+AGG + chr1_4:24434392-24434411 Msa0157300:three_prime_UTR 50.0%
ACAAGAGATCCATGCAGTGG+AGG + chr1_4:24434769-24434788 Msa0157300:three_prime_UTR 50.0%
CAAGAGATCCATGCAGTGGA+GGG + chr1_4:24434770-24434789 Msa0157300:three_prime_UTR 50.0%
! AAGGGACATGTGGGCTGAGT+TGG + chr1_4:24429671-24429690 Msa0157300:five_prime_UTR 55.0%
AGCACTAGCTGCTGCTGCTA+GGG + chr1_4:24430044-24430063 Msa0157300:CDS 55.0%
CGTCCTAGTAACGCGTTGCT+TGG - chr1_4:24431246-24431265 None:intergenic 55.0%
ACGCGTTACTAGGACGAGCA+TGG + chr1_4:24431250-24431269 Msa0157300:CDS 55.0%
ATACGGGGATAACAGCGAGG+TGG - chr1_4:24431373-24431392 None:intergenic 55.0%
GAGATACGGGGATAACAGCG+AGG - chr1_4:24431376-24431395 None:intergenic 55.0%
CTGAGATATACTGCCAGCCG+AGG - chr1_4:24431827-24431846 None:intergenic 55.0%
CTCGGCTGGCAGTATATCTC+AGG + chr1_4:24431825-24431844 Msa0157300:CDS 55.0%
TGAGCGCTTGGATGATCCTG+AGG + chr1_4:24431872-24431891 Msa0157300:CDS 55.0%
GTTGGCATTCTCGCCAACTC+AGG - chr1_4:24432897-24432916 None:intergenic 55.0%
TGGCGAGAATGCCAACTGAG+TGG + chr1_4:24432901-24432920 Msa0157300:CDS 55.0%
! AGAGCATCAGGAGTCGAGCT+AGG + chr1_4:24432960-24432979 Msa0157300:CDS 55.0%
! CATTTTCATGCAGGGGCGAC+AGG + chr1_4:24433787-24433806 Msa0157300:intron 55.0%
! ATGAGCACTGCAGCTGCTAC+TGG - chr1_4:24433840-24433859 None:intergenic 55.0%
AGTAGCAGCTGCAGTGCTCA+TGG + chr1_4:24433839-24433858 Msa0157300:three_prime_UTR 55.0%
! TCACAGCCTGAAAGGGTGCA+AGG + chr1_4:24434375-24434394 Msa0157300:three_prime_UTR 55.0%
CTAGCAGCAGCAGCTAGTGC+TGG - chr1_4:24430045-24430064 None:intergenic 60.0%
CAGCACTAGCTGCTGCTGCT+AGG + chr1_4:24430043-24430062 Msa0157300:CDS 60.0%
CTAGCTGCTGCTGCTAGGGA+TGG + chr1_4:24430048-24430067 Msa0157300:CDS 60.0%
CTAGGACGAGCATGGTCTCC+AGG + chr1_4:24431258-24431277 Msa0157300:CDS 60.0%
GACGAGCATGGTCTCCAGGT+TGG + chr1_4:24431262-24431281 Msa0157300:CDS 60.0%
TTTCATGCAGGGGCGACAGG+AGG + chr1_4:24433790-24433809 Msa0157300:intron 60.0%
GTCGATGTCCCTCCACTGCA+TGG - chr1_4:24434781-24434800 None:intergenic 60.0%
CGCTCAAGCTCGTGACCGTC+TGG - chr1_4:24431858-24431877 None:intergenic 65.0%
CGGTCACGAGCTTGAGCGCT+TGG + chr1_4:24431860-24431879 Msa0157300:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 24429279 24434800 24429279 ID=Msa0157300;Name=Msa0157300
chr1_4 mRNA 24429279 24434800 24429279 ID=Msa0157300-mRNA-1;Parent=Msa0157300;Name=Msa0157300-mRNA-1;_AED=0.08;_eAED=0.08;_QI=706|0.8|0.83|1|0.6|0.5|6|873|608
chr1_4 exon 24429279 24430294 24429279 ID=Msa0157300-mRNA-1:exon:8433;Parent=Msa0157300-mRNA-1
chr1_4 exon 24430719 24430940 24430719 ID=Msa0157300-mRNA-1:exon:8434;Parent=Msa0157300-mRNA-1
chr1_4 exon 24431187 24431893 24431187 ID=Msa0157300-mRNA-1:exon:8435;Parent=Msa0157300-mRNA-1
chr1_4 exon 24432843 24433413 24432843 ID=Msa0157300-mRNA-1:exon:8436;Parent=Msa0157300-mRNA-1
chr1_4 exon 24433800 24434635 24433800 ID=Msa0157300-mRNA-1:exon:8437;Parent=Msa0157300-mRNA-1
chr1_4 exon 24434747 24434800 24434747 ID=Msa0157300-mRNA-1:exon:8438;Parent=Msa0157300-mRNA-1
chr1_4 five_prime_UTR 24429279 24429984 24429279 ID=Msa0157300-mRNA-1:five_prime_utr;Parent=Msa0157300-mRNA-1
chr1_4 CDS 24429985 24430294 24429985 ID=Msa0157300-mRNA-1:cds;Parent=Msa0157300-mRNA-1
chr1_4 CDS 24430719 24430940 24430719 ID=Msa0157300-mRNA-1:cds;Parent=Msa0157300-mRNA-1
chr1_4 CDS 24431187 24431893 24431187 ID=Msa0157300-mRNA-1:cds;Parent=Msa0157300-mRNA-1
chr1_4 CDS 24432843 24433413 24432843 ID=Msa0157300-mRNA-1:cds;Parent=Msa0157300-mRNA-1
chr1_4 CDS 24433800 24433816 24433800 ID=Msa0157300-mRNA-1:cds;Parent=Msa0157300-mRNA-1
chr1_4 three_prime_UTR 24433817 24434635 24433817 ID=Msa0157300-mRNA-1:three_prime_utr;Parent=Msa0157300-mRNA-1
chr1_4 three_prime_UTR 24434747 24434800 24434747 ID=Msa0157300-mRNA-1:three_prime_utr;Parent=Msa0157300-mRNA-1
Gene Sequence

>Msa0157300

ATGGGTAGCAATAGAACCATTGTTTGGTTTAGAAGGGACCTTAGAATTGAGGACAATCCAGCACTAGCTGCTGCTGCTAGGGATGGTTCTGTATTCCCTGTGTTTATATGGTGTCCTAAAGAGGAAGGACAATTTTATCCAGGAAGAGTTTCAAGGTGGTGGCTGAAGCAGTCTTTAGTTCACTTGGATCAGTCCTTGAAATCACTTGGTTCGAGACTCGTGTTGATCAAAACTGAGAGTACTCTCAATGCTCTCTTGGATTGTATAAATGCTATTCAAGCTACAAAAGTTGTGTTTAACCATCTCTATGATCCTGTTTCACTGGTTCGAGACCACAACATCAAAGAAAAGCTAGTGGAACTTGGCTTATCAGTGAAAAGCTATAATGGGGATCTGTTGTATGAGCCTTGGGAAGTATATGATGAGAAGGGACATGCTTTTACAACCTTCGATCCTTTTTGGCAGAGATGCTTGCACAAGCAAATGGAACCTGTTTCGCTTATTCCACCTTGGCAATTAATTCCTGCTGAAGGAAAAGTCAAGAAATGTTCAATAGAGGATTTAGGTCTCGAAAATGAATTAGAAAAACCAAGCAACGCGTTACTAGGACGAGCATGGTCTCCAGGTTGGAGCAATGCTGACAAGGCTTTAACAGAATTTATGGACAAGCAGCTACTTCACTACTCCAAGAATAGGCAAAAGGTTGGTGGAGACTCCACCTCGCTGTTATCCCCGTATCTCCATTTCGGAGAGTTGAGTGTGAGGAAAGTTTTTCAAATGGCTCGCATAAAGCAGATATTGTGGGGAAACGAAGGCAACAGTGTTGGAGAAGAAAGTGTAGCTCTTTTCCTTAGAGCAATTGGACTAAGAGAGTACTCGCGTTATCTTTGTTTCAATTTTCCGTTCACTCATGAGAGAGCACTTCTTGGACACTTGAGTTTTTTCCCTTGGAATGCTGATCCGTCAAACTTCAAGACTTGGAGACAAGGTAGGACTGGCTACCCTTTAGTTGATGCAGGAATGAGAGAACTTTGGGCTACAGGATGGATGCATAACCGAATCAGAGTTATAGTTTCAAGTTTTGCTGTGAAAATGTTGCTTCTACCTTGGAAATGGGGAATGAAGTATTTCTGGGACACGCTTTTGGATGCAGACCTTGAATGTGATATCCTCGGCTGGCAGTATATCTCAGGATGCTTACCAGACGGTCACGAGCTTGAGCGCTTGGATGATCCTGAGATTTTAGGATCTAGGTTTGATCCAGAAGGAGAATATGTAAGGCAATGGCTACCTGAGTTGGCGAGAATGCCAACTGAGTGGATCCATCATCCTTGGAATGCACCACTTAGTGTGCTTAGAGCATCAGGAGTCGAGCTAGGTCAAAACTATCCGAATCCAATAATTGATATAGATATGGCCAGAGAAAACCTGACTCAAGCCATATTCAAGATGTGGGAAATTCAAGCAGCATCAAAAGCTTCTGGCTCTGAAGCAAGGGATGAAGTTGTTGCTGAAAGTGAATATCTAGACATTCCAAAAGTTGTCCTCCTTAAGGAAAAAGCTCCGTCTGCTACTATTTCAGCTAATGATCAGAAAGTGCCGGCATTTCAGGATCCTAAGAATGAACTACCTATTAGGAAGAGAACAAAATGTTTTGAAGAGAAGAGAAAGAACAAGGAAAATTCCGTGAATCATGTGAAAGATAGTAATGTTTCAAGCTCTGACCATGAAGACACTTGCTCTACAGCTGACTCTTCACGTAAGAAGCAGTGTAGTACAAGCACCTATTCATTTTCTGTTCCACAACAATGGGCGACAGGAGGTTGA
Protein sequence

>Msa0157300

MGSNRTIVWFRRDLRIEDNPALAAAARDGSVFPVFIWCPKEEGQFYPGRVSRWWLKQSLVHLDQSLKSLGSRLVLIKTESTLNALLDCINAIQATKVVFNHLYDPVSLVRDHNIKEKLVELGLSVKSYNGDLLYEPWEVYDEKGHAFTTFDPFWQRCLHKQMEPVSLIPPWQLIPAEGKVKKCSIEDLGLENELEKPSNALLGRAWSPGWSNADKALTEFMDKQLLHYSKNRQKVGGDSTSLLSPYLHFGELSVRKVFQMARIKQILWGNEGNSVGEESVALFLRAIGLREYSRYLCFNFPFTHERALLGHLSFFPWNADPSNFKTWRQGRTGYPLVDAGMRELWATGWMHNRIRVIVSSFAVKMLLLPWKWGMKYFWDTLLDADLECDILGWQYISGCLPDGHELERLDDPEILGSRFDPEGEYVRQWLPELARMPTEWIHHPWNAPLSVLRASGVELGQNYPNPIIDIDMARENLTQAIFKMWEIQAASKASGSEARDEVVAESEYLDIPKVVLLKEKAPSATISANDQKVPAFQDPKNELPIRKRTKCFEEKRKNKENSVNHVKDSNVSSSDHEDTCSTADSSRKKQCSTSTYSFSVPQQWATGG*