Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0126160 | XP_013468867.1 | 98.462 | 520 | 8 | 0 | 1 | 520 | 1 | 520 | 0.0 | 1057 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0126160 | sp|Q9FHY8|HLB1_ARATH | 64.632 | 557 | 147 | 13 | 5 | 520 | 18 | 565 | 0.0 | 676 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0126160 | A0A072VLP9 | 98.462 | 520 | 8 | 0 | 1 | 520 | 1 | 520 | 0.0 | 1057 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0078360 | Msa0126160 | 0.837119 | 6.271126e-57 | -8.615850e-47 |
| Msa0126160 | Msa0218040 | 0.805903 | 1.066045e-49 | -8.615850e-47 |
| Msa0126160 | Msa0301520 | 0.802751 | 4.834294e-49 | -8.615850e-47 |
| Msa0126160 | Msa0428210 | 0.867013 | 1.871333e-65 | -8.615850e-47 |
| Msa0126160 | Msa0430230 | 0.851215 | 1.025868e-60 | -8.615850e-47 |
| Msa0126160 | Msa0474570 | 0.831771 | 1.382215e-55 | -8.615850e-47 |
| Msa0126160 | Msa0479620 | 0.807481 | 4.950339e-50 | -8.615850e-47 |
| Msa0126160 | Msa0508180 | 0.805808 | 1.116257e-49 | -8.615850e-47 |
| Msa0126160 | Msa0519150 | 0.866107 | 3.630228e-65 | -8.615850e-47 |
| Msa0126160 | Msa0525880 | 0.807420 | 5.098693e-50 | -8.615850e-47 |
| Msa0126160 | Msa0563090 | 0.807099 | 5.963621e-50 | -8.615850e-47 |
| Msa0126160 | Msa1070890 | 0.822864 | 1.885839e-53 | -8.615850e-47 |
| Msa0126160 | Msa1078830 | 0.810809 | 9.581228e-51 | -8.615850e-47 |
| Msa0126160 | Msa1078890 | 0.830953 | 2.196198e-55 | -8.615850e-47 |
| Msa0126160 | Msa1331300 | 0.807522 | 4.850827e-50 | -8.615850e-47 |
| Msa0126160 | Msa1373170 | 0.822750 | 2.004006e-53 | -8.615850e-47 |
| Msa0126160 | Msa1375130 | 0.835885 | 1.293222e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0126160 | MtrunA17_Chr1g0189021 | 98.462 | 520 | 8 | 0 | 1 | 520 | 1 | 520 | 0.0 | 1057 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0126160 | AT5G41950.1 | 64.632 | 557 | 147 | 13 | 5 | 520 | 18 | 565 | 0.0 | 676 |
Find 157 sgRNAs with CRISPR-Local
Find 596 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGTTCTGGTTCGGTTTC+TGG | 0.053405 | 1_3:+55077657 | None:intergenic |
| TATTTCAGGCGCTTAATAAT+TGG | 0.142305 | 1_3:-55073311 | Msa0126160:intron |
| TGTACTTGTTCTTGTGATTC+TGG | 0.181604 | 1_3:+55077636 | None:intergenic |
| TCGTGATTCGATTTGGATTC+TGG | 0.191653 | 1_3:+55077693 | None:intergenic |
| AGATTCTGGTTCAGACATTT+TGG | 0.197543 | 1_3:+55077770 | None:intergenic |
| GAGCTAACATCTTCTCTTTC+GGG | 0.200894 | 1_3:+55077423 | None:intergenic |
| CGGTTAAATATCCAACTTTA+AGG | 0.206145 | 1_3:+55070356 | None:intergenic |
| TGGCTTCTTACTGAATAATT+TGG | 0.228506 | 1_3:+55071033 | None:intergenic |
| TGTTAATTGCATTACCAATT+TGG | 0.239005 | 1_3:-55069168 | Msa0126160:three_prime_UTR |
| CTCAATTTGACAGACCAAAT+TGG | 0.255916 | 1_3:+55069154 | None:intergenic |
| TCTTGTGATTCTGGTTGTTC+TGG | 0.283706 | 1_3:+55077645 | None:intergenic |
| CACCGGGCAATTTACAATCT+TGG | 0.286151 | 1_3:-55071304 | Msa0126160:CDS |
| TACAGTGCATCATAATCTTC+AGG | 0.287071 | 1_3:+55076286 | None:intergenic |
| AAGATGTTAGCTCTCCTTAC+AGG | 0.291498 | 1_3:-55077413 | Msa0126160:intron |
| TTCGATTTGGATTCTGGTTC+GGG | 0.300423 | 1_3:+55077699 | None:intergenic |
| TCTTATAAAATATGAATTAT+CGG | 0.315234 | 1_3:+55068997 | None:intergenic |
| ATTTCAGGCGCTTAATAATT+GGG | 0.322345 | 1_3:-55073310 | Msa0126160:intron |
| ATCAGGTTCGTGATTCGATT+TGG | 0.335445 | 1_3:+55077686 | None:intergenic |
| AGAGCTAACATCTTCTCTTT+CGG | 0.335566 | 1_3:+55077422 | None:intergenic |
| CCTCTAATTTGATACTTCAT+TGG | 0.336009 | 1_3:-55068908 | Msa0126160:three_prime_UTR |
| TAATTGGGGACTTGCGCTTC+AGG | 0.337641 | 1_3:-55073295 | Msa0126160:intron |
| TCTGCATCGTTGTTAACTTC+TGG | 0.345818 | 1_3:+55077582 | None:intergenic |
| TGCTGACTCTTGGGAATCAT+TGG | 0.349651 | 1_3:-55069286 | Msa0126160:CDS |
| GTACAACTGGAACCGGAATC+TGG | 0.351097 | 1_3:-55077618 | Msa0126160:CDS |
| TTACAATCTTGGAACTGTTC+TGG | 0.353539 | 1_3:-55071293 | Msa0126160:intron |
| TCGGTTTCTGGTTGAGGATC+AGG | 0.353910 | 1_3:+55077669 | None:intergenic |
| ATTATGATGCACTGTACAAT+TGG | 0.360131 | 1_3:-55076279 | Msa0126160:CDS |
| CTGACTTTGCCACCTGGTGC+TGG | 0.360992 | 1_3:-55069988 | Msa0126160:CDS |
| CCAATGAAGTATCAAATTAG+AGG | 0.365718 | 1_3:+55068908 | None:intergenic |
| GATTGGCTGTACAATTCATT+TGG | 0.366257 | 1_3:+55071090 | None:intergenic |
| CAATTGGGCATTGGTACTTC+AGG | 0.369935 | 1_3:-55076263 | Msa0126160:intron |
| GCTGTTGCTGTTGACTATCT+TGG | 0.373402 | 1_3:+55076611 | None:intergenic |
| ATTCGATTTGGATTCTGGTT+CGG | 0.373895 | 1_3:+55077698 | None:intergenic |
| CTGAGGATGCGGTGAAGAAT+TGG | 0.382580 | 1_3:+55077518 | None:intergenic |
| TTAGAAGGTGAAGTGGAATC+TGG | 0.383082 | 1_3:+55074749 | None:intergenic |
| ATTGGTACCAACGACTTCAT+TGG | 0.388352 | 1_3:+55077536 | None:intergenic |
| ACCATGAGAGAATTGCTTCA+TGG | 0.392969 | 1_3:-55077465 | Msa0126160:CDS |
| CCGTCCTGAGATTGTGGTTC+GGG | 0.393515 | 1_3:+55077726 | None:intergenic |
| AATCCACGACATTTAATAGA+TGG | 0.401089 | 1_3:+55069023 | None:intergenic |
| GCAGAGGACACTTTAAGAAC+AGG | 0.403120 | 1_3:-55071141 | Msa0126160:CDS |
| ATCAAATTAGAGGATCAAAC+AGG | 0.403785 | 1_3:+55068918 | None:intergenic |
| TGCTTGCCTCTGTTCAACTC+TGG | 0.404309 | 1_3:+55070113 | None:intergenic |
| TTATCAAGGTTGCTGACTCT+TGG | 0.405651 | 1_3:-55069296 | Msa0126160:intron |
| ATCACAAGAACAAGTACAAC+TGG | 0.406670 | 1_3:-55077631 | Msa0126160:CDS |
| CTTGCGGTTGGTACGATCTA+TGG | 0.407275 | 1_3:-55070815 | Msa0126160:intron |
| TTAAAGCAGTCCAACTCAAC+TGG | 0.408233 | 1_3:-55073547 | Msa0126160:CDS |
| GTATCCAGGCTTACTACAAT+TGG | 0.408555 | 1_3:-55073883 | Msa0126160:intron |
| ATTCATGGCATCTCCTGATC+TGG | 0.410632 | 1_3:+55070074 | None:intergenic |
| TGATTCTGGTTGTTCTGGTT+CGG | 0.411227 | 1_3:+55077650 | None:intergenic |
| TCAAGCAGAGCATCTTTAGA+AGG | 0.411824 | 1_3:+55074734 | None:intergenic |
| TCTGGTTCGGTTTCTGGTTG+AGG | 0.412637 | 1_3:+55077663 | None:intergenic |
| CAAAGTCTCTCAACCAGATC+AGG | 0.413385 | 1_3:-55070087 | Msa0126160:CDS |
| TATCAAGGTTGCTGACTCTT+GGG | 0.414988 | 1_3:-55069295 | Msa0126160:intron |
| CAAGACATAACAGATGTAAA+AGG | 0.417047 | 1_3:+55068950 | None:intergenic |
| CTCTGCATTGATACAGTTCA+TGG | 0.422436 | 1_3:-55069964 | Msa0126160:CDS |
| TTCTTCGTTCAGCATTGCAT+TGG | 0.424964 | 1_3:-55077887 | Msa0126160:five_prime_UTR |
| AGCTGAAGAGCTATGGAAAC+AGG | 0.425760 | 1_3:-55073813 | Msa0126160:intron |
| GTATTGGCGGGTATTATAAC+AGG | 0.435968 | 1_3:-55069204 | Msa0126160:CDS |
| CCGCTACCACACCTTAAAGT+TGG | 0.441526 | 1_3:-55070367 | Msa0126160:CDS |
| GATCAGGAGATGCCATGAAT+GGG | 0.443681 | 1_3:-55070071 | Msa0126160:CDS |
| ATCGTTGTTAACTTCTGGAT+CGG | 0.445981 | 1_3:+55077587 | None:intergenic |
| TGAGATTGTGGTTCGGGTGA+TGG | 0.446870 | 1_3:+55077732 | None:intergenic |
| GGAATCATTGGATGGATGGC+TGG | 0.453718 | 1_3:-55069274 | Msa0126160:CDS |
| AGATCAGGAGATGCCATGAA+TGG | 0.456962 | 1_3:-55070072 | Msa0126160:CDS |
| TATTTAACCGCACCTCCTGC+GGG | 0.458286 | 1_3:-55070343 | Msa0126160:CDS |
| TCGTTGTTAACTTCTGGATC+GGG | 0.458987 | 1_3:+55077588 | None:intergenic |
| TGGAATGATGAATTGGGGAG+AGG | 0.463462 | 1_3:+55077806 | None:intergenic |
| GATCGTTTCCAGTCATTATG+AGG | 0.464366 | 1_3:+55070307 | None:intergenic |
| TCCGTCCTGAGATTGTGGTT+CGG | 0.464441 | 1_3:+55077725 | None:intergenic |
| AGTTCATGGATCAGTTTACT+TGG | 0.466595 | 1_3:-55069950 | Msa0126160:intron |
| GAGTTGATAAACAGCGTTGT+AGG | 0.474591 | 1_3:-55076562 | Msa0126160:CDS |
| AGAACAAGTACAACTGGAAC+CGG | 0.477279 | 1_3:-55077625 | Msa0126160:CDS |
| ACTCAACTGGAACAGTCCTC+AGG | 0.484214 | 1_3:-55073534 | Msa0126160:intron |
| ATGATGAATTGGGGAGAGGA+AGG | 0.488948 | 1_3:+55077810 | None:intergenic |
| AGTTGCAATTTGATTTCCAC+CGG | 0.493039 | 1_3:-55071321 | Msa0126160:CDS |
| GAAGAAGAAGAATGAATGAA+TGG | 0.495376 | 1_3:+55077904 | None:intergenic |
| ATCACCCGAACCACAATCTC+AGG | 0.495672 | 1_3:-55077730 | Msa0126160:CDS |
| TTCATTGGTATACATTGGTA+AGG | 0.499899 | 1_3:-55068893 | Msa0126160:three_prime_UTR |
| ATATTTAACCGCACCTCCTG+CGG | 0.501162 | 1_3:-55070344 | Msa0126160:CDS |
| GCTTGCCTCTGTTCAACTCT+GGG | 0.504813 | 1_3:+55070114 | None:intergenic |
| CAAAGGAAGCTGAAGAGCTA+TGG | 0.504826 | 1_3:-55073820 | Msa0126160:CDS |
| TGTGGTTCGGGTGATGGTTG+AGG | 0.504894 | 1_3:+55077738 | None:intergenic |
| GGATCACGAAAAGCTTCAGC+AGG | 0.507858 | 1_3:-55070272 | Msa0126160:intron |
| GATACTTCATTGGTATACAT+TGG | 0.510939 | 1_3:-55068898 | Msa0126160:three_prime_UTR |
| CTTGGGAATCATTGGATGGA+TGG | 0.512023 | 1_3:-55069278 | Msa0126160:CDS |
| CTGCAATATATATTGCAGAT+TGG | 0.512331 | 1_3:+55071073 | None:intergenic |
| ACAGTGCATCATAATCTTCA+GGG | 0.517083 | 1_3:+55076287 | None:intergenic |
| TTCCAAGATTGTAAATTGCC+CGG | 0.521530 | 1_3:+55071302 | None:intergenic |
| GCTGATCTGACTTTGCCACC+TGG | 0.523003 | 1_3:-55069994 | Msa0126160:CDS |
| GAGGACTGTTCCAGTTGAGT+TGG | 0.523242 | 1_3:+55073537 | None:intergenic |
| AGTTCGCAAAGAAGTGCAAA+AGG | 0.525716 | 1_3:+55069114 | None:intergenic |
| GAAATCAAATTGCAACTGTA+TGG | 0.525917 | 1_3:+55071327 | None:intergenic |
| GGTGCTCCGTCCTGAGATTG+TGG | 0.526798 | 1_3:+55077720 | None:intergenic |
| TATCCAGGCTTACTACAATT+GGG | 0.527161 | 1_3:-55073882 | Msa0126160:intron |
| AGAACAGAACAATGCTGCTA+TGG | 0.535089 | 1_3:-55076584 | Msa0126160:CDS |
| TTGATGAGGAGGGACGGTCT+AGG | 0.539601 | 1_3:-55076537 | Msa0126160:CDS |
| TTATGATGCACTGTACAATT+GGG | 0.539658 | 1_3:-55076278 | Msa0126160:CDS |
| TTTCAGGCGCTTAATAATTG+GGG | 0.541226 | 1_3:-55073309 | Msa0126160:intron |
| TAGCCATCTATTAAATGTCG+TGG | 0.545540 | 1_3:-55069026 | Msa0126160:three_prime_UTR |
| GACTCTTGGGAATCATTGGA+TGG | 0.547060 | 1_3:-55069282 | Msa0126160:CDS |
| TAGTTGCACCTCATAATGAC+TGG | 0.549693 | 1_3:-55070315 | Msa0126160:CDS |
| CAGAGGACACTTTAAGAACA+GGG | 0.561148 | 1_3:-55071140 | Msa0126160:CDS |
| GCGAGGCAAAAGTGATGTAT+TGG | 0.562011 | 1_3:-55069220 | Msa0126160:CDS |
| GGCAAAAGTGATGTATTGGC+GGG | 0.563534 | 1_3:-55069216 | Msa0126160:CDS |
| TTCTAAAGATGCTCTGCTTG+AGG | 0.564390 | 1_3:-55074732 | Msa0126160:CDS |
| ATTGCAACTGTATGGCTGAA+CGG | 0.567248 | 1_3:+55071335 | None:intergenic |
| AGGCAAAAGTGATGTATTGG+CGG | 0.568848 | 1_3:-55069217 | Msa0126160:CDS |
| GCTCTTCAGCTTCCTTTGTG+CGG | 0.573547 | 1_3:+55073825 | None:intergenic |
| TAAGAATTTCAGAATTTGTG+TGG | 0.574174 | 1_3:-55068979 | Msa0126160:three_prime_UTR |
| AGCATCTTTAGAAGGTGAAG+TGG | 0.579092 | 1_3:+55074742 | None:intergenic |
| CGTTGTAGGTGTTGATGAGG+AGG | 0.579367 | 1_3:-55076548 | Msa0126160:CDS |
| GTCTACACTATTTATGTGCG+AGG | 0.583038 | 1_3:-55069237 | Msa0126160:CDS |
| GGTTGAGCGGAAAACCTGTA+AGG | 0.583881 | 1_3:+55077399 | None:intergenic |
| AGGAGGGACGGTCTAGGCAA+CGG | 0.587494 | 1_3:-55076531 | Msa0126160:CDS |
| CATCATGTAGTGTGGGACAA+AGG | 0.588356 | 1_3:+55074678 | None:intergenic |
| TCCATGAAGCAATTCTCTCA+TGG | 0.592727 | 1_3:+55077464 | None:intergenic |
| ATCAATTCCAATGAAGTCGT+TGG | 0.594314 | 1_3:-55077543 | Msa0126160:CDS |
| CTTACATACATCATGTAGTG+TGG | 0.595760 | 1_3:+55074670 | None:intergenic |
| GGAGAGGAAGGAGTTTCGAT+CGG | 0.599511 | 1_3:+55077822 | None:intergenic |
| CACGCAAACACAGTAGACGC+GGG | 0.601453 | 1_3:+55077851 | None:intergenic |
| AAATATCCAACTTTAAGGTG+TGG | 0.603114 | 1_3:+55070361 | None:intergenic |
| TCAATGCAGAGGCCAGCACC+AGG | 0.604478 | 1_3:+55069976 | None:intergenic |
| AGATGGCTAATGAGTAAACT+CGG | 0.611762 | 1_3:+55069040 | None:intergenic |
| CAGCGTTGTAGGTGTTGATG+AGG | 0.612108 | 1_3:-55076551 | Msa0126160:CDS |
| TGTTTGCATGCAGGAAAGTG+CGG | 0.614003 | 1_3:-55074783 | Msa0126160:intron |
| TTTAACCGCACCTCCTGCGG+GGG | 0.615781 | 1_3:-55070341 | Msa0126160:CDS |
| TTCTTACATTTGCTGCCAAG+AGG | 0.617598 | 1_3:-55076507 | Msa0126160:intron |
| CCAACTTTAAGGTGTGGTAG+CGG | 0.619422 | 1_3:+55070367 | None:intergenic |
| ATATAGCAGTGCCTTGCGGT+TGG | 0.626613 | 1_3:-55070827 | Msa0126160:CDS |
| TTACATACATCATGTAGTGT+GGG | 0.629806 | 1_3:+55074671 | None:intergenic |
| CAAACACAGTAGACGCGGGG+AGG | 0.639834 | 1_3:+55077855 | None:intergenic |
| TAGGTGTTGATGAGGAGGGA+CGG | 0.640085 | 1_3:-55076543 | Msa0126160:CDS |
| GGTATGCTGCTGCTATTGAG+AGG | 0.640973 | 1_3:-55076312 | Msa0126160:CDS |
| TGCACTGTACAATTGGGCAT+TGG | 0.643214 | 1_3:-55076272 | Msa0126160:CDS |
| ATCAGGAGATGCCATGAATG+GGG | 0.644427 | 1_3:-55070070 | Msa0126160:CDS |
| ATTTAACCGCACCTCCTGCG+GGG | 0.650150 | 1_3:-55070342 | Msa0126160:CDS |
| GAGGACACTTTAAGAACAGG+GGG | 0.652005 | 1_3:-55071138 | Msa0126160:CDS |
| CATGAACTGTATCAATGCAG+AGG | 0.654472 | 1_3:+55069965 | None:intergenic |
| TGTACGAACTGCTATCAGCA+AGG | 0.656315 | 1_3:-55071474 | Msa0126160:intron |
| GTTGTAGGTGTTGATGAGGA+GGG | 0.661388 | 1_3:-55076547 | Msa0126160:CDS |
| GACTTCATTGGAATTGATCG+CGG | 0.661709 | 1_3:+55077548 | None:intergenic |
| CATAGATCGTACCAACCGCA+AGG | 0.665616 | 1_3:+55070816 | None:intergenic |
| TCAAATTAGAGGATCAAACA+GGG | 0.667541 | 1_3:+55068919 | None:intergenic |
| CCCGAACCACAATCTCAGGA+CGG | 0.671784 | 1_3:-55077726 | Msa0126160:CDS |
| ACACGCAAACACAGTAGACG+CGG | 0.676931 | 1_3:+55077850 | None:intergenic |
| GTTGCAATTTGATTTCCACC+GGG | 0.682764 | 1_3:-55071320 | Msa0126160:CDS |
| ACGCAAACACAGTAGACGCG+GGG | 0.684515 | 1_3:+55077852 | None:intergenic |
| TCTGATCGTGCAAAGATGCG+AGG | 0.685281 | 1_3:-55073848 | Msa0126160:CDS |
| AAAGATGCGAGGCCGCACAA+AGG | 0.686655 | 1_3:-55073837 | Msa0126160:CDS |
| TTTACAGTACGGATTAGCAG+AGG | 0.686728 | 1_3:-55071157 | Msa0126160:intron |
| ATGCAGAGGCCAGCACCAGG+TGG | 0.687236 | 1_3:+55069979 | None:intergenic |
| AGGTATATAGCAGTGCCTTG+CGG | 0.692086 | 1_3:-55070831 | Msa0126160:CDS |
| TAGTGTGGGACAAAGGCGAG+TGG | 0.693067 | 1_3:+55074685 | None:intergenic |
| CAAGATTGTAAATTGCCCGG+TGG | 0.696463 | 1_3:+55071305 | None:intergenic |
| AGAGGACACTTTAAGAACAG+GGG | 0.707286 | 1_3:-55071139 | Msa0126160:CDS |
| AGGTACCCAGAGTTGAACAG+AGG | 0.741985 | 1_3:-55070119 | Msa0126160:CDS |
| AGGACACTTTAAGAACAGGG+GGG | 0.806890 | 1_3:-55071137 | Msa0126160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTATTTAATTTAAATTT+TGG | + | chr1_3:55076615-55076634 | None:intergenic | 0.0% |
| !!! | AAAAATGTTTTTTTTTAACT+TGG | + | chr1_3:55069928-55069947 | None:intergenic | 10.0% |
| !!! | AATTTTATCATAACTAATTT+TGG | - | chr1_3:55069992-55070011 | Msa0126160:CDS | 10.0% |
| !! | TTATATTCATATTTATATTC+TGG | + | chr1_3:55072254-55072273 | None:intergenic | 10.0% |
| !!! | TTTTTCAAATTATTATCAAA+TGG | + | chr1_3:55072572-55072591 | None:intergenic | 10.0% |
| !!! | ATATGATTTTAATTTTTAAG+TGG | - | chr1_3:55072610-55072629 | Msa0126160:intron | 10.0% |
| !! | AAAATTTAACAAAAATTAGA+TGG | + | chr1_3:55073178-55073197 | None:intergenic | 10.0% |
| !! | TCTTATAAAATATGAATTAT+CGG | + | chr1_3:55077778-55077797 | None:intergenic | 10.0% |
| !! | ATCTATATAAATGCTAAAAT+TGG | + | chr1_3:55069652-55069671 | None:intergenic | 15.0% |
| !! | TATAGATATTGAATTATTGA+AGG | - | chr1_3:55069725-55069744 | Msa0126160:intron | 15.0% |
| !!! | AAACTTATAATTTTCTTACT+TGG | - | chr1_3:55070429-55070448 | Msa0126160:intron | 15.0% |
| !!! | GTATTTTATTAGAAAACATA+GGG | + | chr1_3:55071715-55071734 | None:intergenic | 15.0% |
| !!! | TCATTTACAACTTTAATTTT+AGG | + | chr1_3:55072177-55072196 | None:intergenic | 15.0% |
| !! | TTTCAAGATTGAAATATATT+GGG | + | chr1_3:55072444-55072463 | None:intergenic | 15.0% |
| !! | ATTTCAAGATTGAAATATAT+TGG | + | chr1_3:55072445-55072464 | None:intergenic | 15.0% |
| !! | ATATATTTCAATCTTGAAAT+TGG | - | chr1_3:55072445-55072464 | Msa0126160:intron | 15.0% |
| !! | AAATTATTATCAAATGGAAT+GGG | + | chr1_3:55072566-55072585 | None:intergenic | 15.0% |
| !!! | TTAGTTGATTAATTTGAATT+TGG | + | chr1_3:55072772-55072791 | None:intergenic | 15.0% |
| !! | AAAATGAAAAATAGTAAAAC+AGG | + | chr1_3:55073880-55073899 | None:intergenic | 15.0% |
| !! | ATTATTATTATTATGCTCAT+CGG | - | chr1_3:55074409-55074428 | Msa0126160:intron | 15.0% |
| !!! | TTATAATCCTTATAATCTTT+TGG | - | chr1_3:55074544-55074563 | Msa0126160:intron | 15.0% |
| !!! | TATATAACATAGTTTTACTT+TGG | - | chr1_3:55074785-55074804 | Msa0126160:intron | 15.0% |
| !! | AAAAAATATTGAGAATTCTT+TGG | - | chr1_3:55074915-55074934 | Msa0126160:intron | 15.0% |
| !! | AGAGAATAAATTATATTCAA+AGG | + | chr1_3:55075381-55075400 | None:intergenic | 15.0% |
| !! | CTTAAAAAAATTCAATTTGT+CGG | + | chr1_3:55076532-55076551 | None:intergenic | 15.0% |
| !!! | ACAAATTGAATTTTTTTAAG+AGG | - | chr1_3:55076532-55076551 | Msa0126160:CDS | 15.0% |
| !!! | TTTTATAATGAAAAAGTTCA+TGG | + | chr1_3:55076992-55077011 | None:intergenic | 15.0% |
| !!! | AGAACAATTTTTAATTACAT+TGG | + | chr1_3:55077323-55077342 | None:intergenic | 15.0% |
| !! | TTTATAATCTTACTAAAACT+TGG | + | chr1_3:55077353-55077372 | None:intergenic | 15.0% |
| !!! | AAGTTTTAGTAAGATTATAA+AGG | - | chr1_3:55077352-55077371 | Msa0126160:intron | 15.0% |
| !!! | AGTTTTAGTAAGATTATAAA+GGG | - | chr1_3:55077353-55077372 | Msa0126160:intron | 15.0% |
| !!! | ATAGATAGATGTTGAATTTT+AGG | - | chr1_3:55069672-55069691 | Msa0126160:intron | 20.0% |
| !!! | TAGATAGATGTTGAATTTTA+GGG | - | chr1_3:55069673-55069692 | Msa0126160:intron | 20.0% |
| !! | AATATCTATATCTTCACAAA+TGG | + | chr1_3:55069715-55069734 | None:intergenic | 20.0% |
| !! | AAGGATTTGATTAATTTACA+CGG | - | chr1_3:55069744-55069763 | Msa0126160:intron | 20.0% |
| !! | TTAAGCTCATTATTGAATTA+TGG | - | chr1_3:55070060-55070079 | Msa0126160:CDS | 20.0% |
| !! | TAAGCTCATTATTGAATTAT+GGG | - | chr1_3:55070061-55070080 | Msa0126160:CDS | 20.0% |
| !!! | TATTTTTTTGTTAGAACACT+TGG | - | chr1_3:55070617-55070636 | Msa0126160:intron | 20.0% |
| !! | TATAATTTCATTTGAGAGTT+GGG | - | chr1_3:55070782-55070801 | Msa0126160:intron | 20.0% |
| !! | ATCTTGTATTCAATAGTAAT+TGG | + | chr1_3:55071034-55071053 | None:intergenic | 20.0% |
| !! | CTACAAATAATTAGGTAAAA+AGG | - | chr1_3:55071547-55071566 | Msa0126160:intron | 20.0% |
| !!! | GGTATTTTATTAGAAAACAT+AGG | + | chr1_3:55071716-55071735 | None:intergenic | 20.0% |
| !!! | TTTTATTTGTACATAAGTAC+AGG | - | chr1_3:55071780-55071799 | Msa0126160:intron | 20.0% |
| !!! | TTTTACATATGAAAAATCCT+TGG | - | chr1_3:55071879-55071898 | Msa0126160:intron | 20.0% |
| !!! | TCATTTAAGATTTTCTTTAG+TGG | + | chr1_3:55072290-55072309 | None:intergenic | 20.0% |
| !! | ACTAAAGAAAATCTTAAATG+AGG | - | chr1_3:55072289-55072308 | Msa0126160:intron | 20.0% |
| !! | CTAAAGAAAATCTTAAATGA+GGG | - | chr1_3:55072290-55072309 | Msa0126160:intron | 20.0% |
| !! | TTCAAGATTGAAATATATTG+GGG | + | chr1_3:55072443-55072462 | None:intergenic | 20.0% |
| !! | AAAATATGTATTACAGATGT+AGG | - | chr1_3:55072477-55072496 | Msa0126160:intron | 20.0% |
| !! | CAAATTATTATCAAATGGAA+TGG | + | chr1_3:55072567-55072586 | None:intergenic | 20.0% |
| !! | TGTAACAAACATCATTTAAT+AGG | + | chr1_3:55073096-55073115 | None:intergenic | 20.0% |
| !! | GAATTCATATTGAATTTGAA+TGG | - | chr1_3:55073121-55073140 | Msa0126160:intron | 20.0% |
| !!! | TGTTAAATTTTTTTTTTCCC+AGG | - | chr1_3:55073187-55073206 | Msa0126160:intron | 20.0% |
| !! | TGATAAAGCAAATATTTACT+GGG | + | chr1_3:55073346-55073365 | None:intergenic | 20.0% |
| !! | ATGATAAAGCAAATATTTAC+TGG | + | chr1_3:55073347-55073366 | None:intergenic | 20.0% |
| !! | AAACAAAATATATTGAACTG+AGG | + | chr1_3:55074226-55074245 | None:intergenic | 20.0% |
| !!! | ACATTTCAAGATTTTAAAAC+TGG | + | chr1_3:55074461-55074480 | None:intergenic | 20.0% |
| !!! | ATTTTCCAATAGGATTTTTT+TGG | + | chr1_3:55074616-55074635 | None:intergenic | 20.0% |
| !!! | TTTTTTGACCAAATTTTACA+TGG | + | chr1_3:55074859-55074878 | None:intergenic | 20.0% |
| !!! | TACCATAACAAAAGTTTTAT+AGG | + | chr1_3:55074959-55074978 | None:intergenic | 20.0% |
| !!! | TACCATAACTAAAGTTTTAT+AGG | + | chr1_3:55075004-55075023 | None:intergenic | 20.0% |
| !! | TTTAGTTATGGTAAATTACA+AGG | - | chr1_3:55075011-55075030 | Msa0126160:intron | 20.0% |
| !! | AATGTTATCATATGACTAAA+AGG | + | chr1_3:55075117-55075136 | None:intergenic | 20.0% |
| !! | TATGAAGTACAATATTTGAA+GGG | + | chr1_3:55075160-55075179 | None:intergenic | 20.0% |
| !! | TTATGAAGTACAATATTTGA+AGG | + | chr1_3:55075161-55075180 | None:intergenic | 20.0% |
| !!! | TATTTTCTTCTCTGAAAATT+TGG | - | chr1_3:55075222-55075241 | Msa0126160:intron | 20.0% |
| !!! | AAGGTAGATATTTTTTAGAA+GGG | - | chr1_3:55075317-55075336 | Msa0126160:intron | 20.0% |
| !! | AGAATAAGGTAAAGTTAAAA+GGG | + | chr1_3:55075406-55075425 | None:intergenic | 20.0% |
| !! | AAGAATAAGGTAAAGTTAAA+AGG | + | chr1_3:55075407-55075426 | None:intergenic | 20.0% |
| !! | CTTCCTTTACAAATATTTAT+TGG | - | chr1_3:55075774-55075793 | Msa0126160:intron | 20.0% |
| !! | TAGCCAATAAATATTTGTAA+AGG | + | chr1_3:55075780-55075799 | None:intergenic | 20.0% |
| !! | GTTGCAAAAAAATTAATAAC+AGG | + | chr1_3:55075881-55075900 | None:intergenic | 20.0% |
| !! | TAGAATTAGAAACATGATTT+AGG | + | chr1_3:55075997-55076016 | None:intergenic | 20.0% |
| !!! | ATGACATAAATTTTCTCTTT+CGG | - | chr1_3:55076070-55076089 | Msa0126160:intron | 20.0% |
| !!! | ATATGGTATAGTTGTTTTAT+TGG | - | chr1_3:55076214-55076233 | Msa0126160:intron | 20.0% |
| !!! | ACATTAAGTTTTGAATTCAT+TGG | - | chr1_3:55076561-55076580 | Msa0126160:CDS | 20.0% |
| !! | GTCTTTGGTTAAAATTTATT+TGG | + | chr1_3:55076941-55076960 | None:intergenic | 20.0% |
| !!! | AATAAATTGTCGACTTTAAT+TGG | - | chr1_3:55077134-55077153 | Msa0126160:intron | 20.0% |
| ! | TGACAATTATGACTAATTGT+CGG | + | chr1_3:55069954-55069973 | None:intergenic | 25.0% |
| ! | TCTAATCTTTCGTGAATATT+AGG | - | chr1_3:55070338-55070357 | Msa0126160:CDS | 25.0% |
| !! | TTTTCTTACTTGGATTTTCT+AGG | - | chr1_3:55070439-55070458 | Msa0126160:intron | 25.0% |
| !!! | TGTAGACTTTATTTCTGTAT+TGG | - | chr1_3:55070593-55070612 | Msa0126160:intron | 25.0% |
| !!! | GTAGACTTTATTTCTGTATT+GGG | - | chr1_3:55070594-55070613 | Msa0126160:intron | 25.0% |
| !!! | TTGATAGGTTTGTTAATTGA+GGG | - | chr1_3:55070653-55070672 | Msa0126160:intron | 25.0% |
| ! | TGTTACGTATAGATAAAAAG+AGG | - | chr1_3:55070743-55070762 | Msa0126160:intron | 25.0% |
| ! | GTTACGTATAGATAAAAAGA+GGG | - | chr1_3:55070744-55070763 | Msa0126160:intron | 25.0% |
| ! | TTACGTATAGATAAAAAGAG+GGG | - | chr1_3:55070745-55070764 | Msa0126160:intron | 25.0% |
| ! | GTATAATTTCATTTGAGAGT+TGG | - | chr1_3:55070781-55070800 | Msa0126160:intron | 25.0% |
| !!! | GCTGTTTTTATAAGCTATAT+TGG | - | chr1_3:55071411-55071430 | Msa0126160:intron | 25.0% |
| !!! | ATTTATATTCTGGCTCATTT+AGG | + | chr1_3:55072244-55072263 | None:intergenic | 25.0% |
| ! | GATAAAGCAAATATTTACTG+GGG | + | chr1_3:55073345-55073364 | None:intergenic | 25.0% |
| !! | AAGAAAACTTAAAGGTGTAT+AGG | + | chr1_3:55073388-55073407 | None:intergenic | 25.0% |
| ! | ATAAACACACATTTAACTGA+GGG | + | chr1_3:55073617-55073636 | None:intergenic | 25.0% |
| ! | AATAAACACACATTTAACTG+AGG | + | chr1_3:55073618-55073637 | None:intergenic | 25.0% |
| !!! | ATAAATTACCAAAGTGCTTT+TGG | + | chr1_3:55073777-55073796 | None:intergenic | 25.0% |
| !! | TTTGTACCTTTTAATGTAGT+TGG | - | chr1_3:55073941-55073960 | Msa0126160:intron | 25.0% |
| ! | ATTGTTCCAACTACATTAAA+AGG | + | chr1_3:55073950-55073969 | None:intergenic | 25.0% |
| !!! | ATGTTTTTTATGAAACCCAA+TGG | + | chr1_3:55074028-55074047 | None:intergenic | 25.0% |
| !! | CAATAGAACATTTTCGTTTA+AGG | - | chr1_3:55074059-55074078 | Msa0126160:intron | 25.0% |
| !!! | CGTTTAAGGTTTGTTATTAA+TGG | - | chr1_3:55074073-55074092 | Msa0126160:intron | 25.0% |
| ! | AGTTCAACTTCAATAAAAAC+TGG | + | chr1_3:55074127-55074146 | None:intergenic | 25.0% |
| !!! | ATTTGATCTACTTTTCTCAT+TGG | - | chr1_3:55074154-55074173 | Msa0126160:intron | 25.0% |
| ! | GTAAAATTTGGTCAAAAAAC+AGG | - | chr1_3:55074860-55074879 | Msa0126160:intron | 25.0% |
| !! | CTTTGGCAAAATATTTTACT+TGG | - | chr1_3:55074932-55074951 | Msa0126160:intron | 25.0% |
| !! | GTCCTATAAAACTTTTGTTA+TGG | - | chr1_3:55074954-55074973 | Msa0126160:intron | 25.0% |
| ! | TTGTTATGGTAAACTACAAA+AGG | - | chr1_3:55074968-55074987 | Msa0126160:intron | 25.0% |
| ! | TGTTATGGTAAACTACAAAA+GGG | - | chr1_3:55074969-55074988 | Msa0126160:intron | 25.0% |
| ! | GTCCTATAAAACTTTAGTTA+TGG | - | chr1_3:55074999-55075018 | Msa0126160:intron | 25.0% |
| ! | TTATGGTAAATTACAAGGAA+GGG | - | chr1_3:55075016-55075035 | Msa0126160:intron | 25.0% |
| ! | ATGAAGTACAATATTTGAAG+GGG | + | chr1_3:55075159-55075178 | None:intergenic | 25.0% |
| !! | GAAAATTTGGTTTCCAATTT+AGG | - | chr1_3:55075235-55075254 | Msa0126160:intron | 25.0% |
| !!! | CAAGGTAGATATTTTTTAGA+AGG | - | chr1_3:55075316-55075335 | Msa0126160:intron | 25.0% |
| ! | GAATAAGGTAAAGTTAAAAG+GGG | + | chr1_3:55075405-55075424 | None:intergenic | 25.0% |
| ! | TAATAACAGGACAAAATAGA+AGG | + | chr1_3:55075868-55075887 | None:intergenic | 25.0% |
| !! | AAGTAACCAAACTGTTTTAT+TGG | - | chr1_3:55076125-55076144 | Msa0126160:intron | 25.0% |
| ! | TGAAATCCAATAAAACAGTT+TGG | + | chr1_3:55076134-55076153 | None:intergenic | 25.0% |
| ! | CTAACAGAAAGATACAAATA+GGG | + | chr1_3:55076158-55076177 | None:intergenic | 25.0% |
| ! | TCTAACAGAAAGATACAAAT+AGG | + | chr1_3:55076159-55076178 | None:intergenic | 25.0% |
| ! | TTAACTTCTAACAGAAAGAT+AGG | + | chr1_3:55076165-55076184 | None:intergenic | 25.0% |
| ! | TATACAATACAAATACACTC+AGG | + | chr1_3:55076866-55076885 | None:intergenic | 25.0% |
| !!! | TTAAAATTTATTTGGTGCTC+TGG | + | chr1_3:55076933-55076952 | None:intergenic | 25.0% |
| ! | GGTAATTTCATTATTGAATG+TGG | + | chr1_3:55077024-55077043 | None:intergenic | 25.0% |
| ! | AACTAATGTTACAAGTTGTT+GGG | + | chr1_3:55077058-55077077 | None:intergenic | 25.0% |
| ! | AAACTAATGTTACAAGTTGT+TGG | + | chr1_3:55077059-55077078 | None:intergenic | 25.0% |
| !! | TTTTGTACATTGCTTTATCA+AGG | - | chr1_3:55077462-55077481 | Msa0126160:CDS | 25.0% |
| ! | TGTTAATTGCATTACCAATT+TGG | - | chr1_3:55077604-55077623 | Msa0126160:CDS | 25.0% |
| ! | TAAGAATTTCAGAATTTGTG+TGG | - | chr1_3:55077793-55077812 | Msa0126160:five_prime_UTR | 25.0% |
| TTTGTAGAGCATAGATATTG+TGG | - | chr1_3:55069443-55069462 | Msa0126160:intron | 30.0% | |
| ATATGCATTGAGAAACTATG+TGG | - | chr1_3:55069485-55069504 | Msa0126160:intron | 30.0% | |
| ACATCTTTAATCAGAAACGT+CGG | + | chr1_3:55069513-55069532 | None:intergenic | 30.0% | |
| GTTTCTGATTAAAGATGTTG+TGG | - | chr1_3:55069515-55069534 | Msa0126160:intron | 30.0% | |
| TACTATTGATATCAACGTGT+CGG | - | chr1_3:55069594-55069613 | Msa0126160:intron | 30.0% | |
| !! | TAATTTTGGCGTAACTCATA+TGG | - | chr1_3:55070006-55070025 | Msa0126160:CDS | 30.0% |
| AAAGCATAACATATTCCTAG+CGG | + | chr1_3:55070319-55070338 | None:intergenic | 30.0% | |
| ATTATGATGCACTGTACAAT+TGG | - | chr1_3:55070493-55070512 | Msa0126160:intron | 30.0% | |
| TTATGATGCACTGTACAATT+GGG | - | chr1_3:55070494-55070513 | Msa0126160:intron | 30.0% | |
| !! | GTTGATAGGTTTGTTAATTG+AGG | - | chr1_3:55070652-55070671 | Msa0126160:intron | 30.0% |
| ! | TTAGTTGGTTAGTTAGTAGT+TGG | - | chr1_3:55070684-55070703 | Msa0126160:intron | 30.0% |
| ! | TAAGACATGTTTCTATCAAG+TGG | - | chr1_3:55070822-55070841 | Msa0126160:CDS | 30.0% |
| AAACACATTCTAGACAATCT+TGG | - | chr1_3:55070910-55070929 | Msa0126160:intron | 30.0% | |
| AGTTTCAAAAAGAGAACTCT+AGG | - | chr1_3:55070950-55070969 | Msa0126160:intron | 30.0% | |
| ACATCTAGGAATCACAATAT+TGG | - | chr1_3:55070977-55070996 | Msa0126160:intron | 30.0% | |
| AATCACAATATTGGTAAGAG+AGG | - | chr1_3:55070986-55071005 | Msa0126160:intron | 30.0% | |
| ! | TGGATGTTATTTGATAACAC+TGG | - | chr1_3:55071219-55071238 | Msa0126160:intron | 30.0% |
| AATTAGCTGTTTATCCAAAC+AGG | + | chr1_3:55071279-55071298 | None:intergenic | 30.0% | |
| AGCTATATTGGTGAACTTAT+TGG | - | chr1_3:55071423-55071442 | Msa0126160:intron | 30.0% | |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | + | chr1_3:55071472-55071491 | None:intergenic | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | + | chr1_3:55071473-55071492 | None:intergenic | 30.0% |
| ! | TGAATAAGTTTGATAGCAAC+TGG | + | chr1_3:55071737-55071756 | None:intergenic | 30.0% |
| TTACATACATCATGTAGTGT+GGG | + | chr1_3:55072104-55072123 | None:intergenic | 30.0% | |
| CTGTATGATGTTTAGATGAA+CGG | - | chr1_3:55072136-55072155 | Msa0126160:intron | 30.0% | |
| TGTATGATGTTTAGATGAAC+GGG | - | chr1_3:55072137-55072156 | Msa0126160:intron | 30.0% | |
| ACATGCTTCCTTCTATTAAA+TGG | - | chr1_3:55072994-55073013 | Msa0126160:intron | 30.0% | |
| CGTAAAAGCCATTTAATAGA+AGG | + | chr1_3:55073005-55073024 | None:intergenic | 30.0% | |
| ! | AATGGCTTTTACGCATATTT+AGG | - | chr1_3:55073012-55073031 | Msa0126160:intron | 30.0% |
| ! | GGGGAAATTGATATGATTTT+TGG | - | chr1_3:55073039-55073058 | Msa0126160:intron | 30.0% |
| CATCATTTAATAGGCATCAA+CGG | + | chr1_3:55073087-55073106 | None:intergenic | 30.0% | |
| AGCTTGTGAAGAAAACTTAA+AGG | + | chr1_3:55073396-55073415 | None:intergenic | 30.0% | |
| TATTTCAGGCGCTTAATAAT+TGG | - | chr1_3:55073461-55073480 | Msa0126160:intron | 30.0% | |
| ATTTCAGGCGCTTAATAATT+GGG | - | chr1_3:55073462-55073481 | Msa0126160:intron | 30.0% | |
| !! | ATGCTTCTAATAGCTTGTTA+GGG | - | chr1_3:55073583-55073602 | Msa0126160:intron | 30.0% |
| TAAACACACATTTAACTGAG+GGG | + | chr1_3:55073616-55073635 | None:intergenic | 30.0% | |
| TGTATACATGATAACACTCT+TGG | + | chr1_3:55073809-55073828 | None:intergenic | 30.0% | |
| TATATTGAACTGAGGCATAT+GGG | + | chr1_3:55074218-55074237 | None:intergenic | 30.0% | |
| ATATATTGAACTGAGGCATA+TGG | + | chr1_3:55074219-55074238 | None:intergenic | 30.0% | |
| AAGCATACAACTAAATGACA+AGG | + | chr1_3:55074309-55074328 | None:intergenic | 30.0% | |
| TGATAATAGATTGAGAGGAT+AGG | + | chr1_3:55074362-55074381 | None:intergenic | 30.0% | |
| ATGACTGATAATAGATTGAG+AGG | + | chr1_3:55074367-55074386 | None:intergenic | 30.0% | |
| TGGATAAAAGATTATGGAAG+TGG | + | chr1_3:55074484-55074503 | None:intergenic | 30.0% | |
| TTGTCGACCAAAAGATTATA+AGG | + | chr1_3:55074554-55074573 | None:intergenic | 30.0% | |
| CTGATAGTATTTCAAGACTA+GGG | - | chr1_3:55074588-55074607 | Msa0126160:intron | 30.0% | |
| ATGTAATGCAAAATAGGCAA+GGG | + | chr1_3:55074644-55074663 | None:intergenic | 30.0% | |
| AATGTAATGCAAAATAGGCA+AGG | + | chr1_3:55074645-55074664 | None:intergenic | 30.0% | |
| ! | TGCCTATTTTGCATTACATT+TGG | - | chr1_3:55074645-55074664 | Msa0126160:intron | 30.0% |
| CACCAAATGTAATGCAAAAT+AGG | + | chr1_3:55074650-55074669 | None:intergenic | 30.0% | |
| AGGATGCTTGAAAATAGAAT+TGG | + | chr1_3:55074696-55074715 | None:intergenic | 30.0% | |
| TCTACTAAGTTGCTAATGTT+AGG | + | chr1_3:55074743-55074762 | None:intergenic | 30.0% | |
| GGCACTAAAAACAATAAAAG+AGG | + | chr1_3:55074834-55074853 | None:intergenic | 30.0% | |
| GTTATGGTAAACTACAAAAG+GGG | - | chr1_3:55074970-55074989 | Msa0126160:intron | 30.0% | |
| GTTATGGTAAATTACAAGGA+AGG | - | chr1_3:55075015-55075034 | Msa0126160:intron | 30.0% | |
| AAGGTGACAAATTGAAGTTA+TGG | + | chr1_3:55075098-55075117 | None:intergenic | 30.0% | |
| AACATTCATAACTGTTTCCA+AGG | - | chr1_3:55075131-55075150 | Msa0126160:intron | 30.0% | |
| !!! | TTTTTTAGAAGGGAATCACA+TGG | - | chr1_3:55075327-55075346 | Msa0126160:intron | 30.0% |
| GAAATCAAATTGCAACTGTA+TGG | + | chr1_3:55075448-55075467 | None:intergenic | 30.0% | |
| TGCTAAATGACTTTACAGTA+CGG | - | chr1_3:55075604-55075623 | Msa0126160:intron | 30.0% | |
| CTGCAATATATATTGCAGAT+TGG | + | chr1_3:55075702-55075721 | None:intergenic | 30.0% | |
| TGGCTTCTTACTGAATAATT+TGG | + | chr1_3:55075742-55075761 | None:intergenic | 30.0% | |
| AAAGGAAGATGATTAGACAA+TGG | + | chr1_3:55075762-55075781 | None:intergenic | 30.0% | |
| ! | TATTGGCTATGTGCATTATT+TGG | - | chr1_3:55075791-55075810 | Msa0126160:intron | 30.0% |
| !!! | GAAATCAGCCCATAATTTTT+TGG | - | chr1_3:55075910-55075929 | Msa0126160:intron | 30.0% |
| GTCACACACCAAAAAATTAT+GGG | + | chr1_3:55075921-55075940 | None:intergenic | 30.0% | |
| TGTCACACACCAAAAAATTA+TGG | + | chr1_3:55075922-55075941 | None:intergenic | 30.0% | |
| !!! | ATAATTTTTTGGTGTGTGAC+AGG | - | chr1_3:55075921-55075940 | Msa0126160:intron | 30.0% |
| TTCTATAGTAGCTTTCAATC+TGG | - | chr1_3:55076012-55076031 | Msa0126160:intron | 30.0% | |
| TCTATAGTAGCTTTCAATCT+GGG | - | chr1_3:55076013-55076032 | Msa0126160:intron | 30.0% | |
| TTGAATTGATATGCGCTATA+TGG | - | chr1_3:55076197-55076216 | Msa0126160:intron | 30.0% | |
| CTAACAGAAAGATAGGAATA+GGG | + | chr1_3:55076247-55076266 | None:intergenic | 30.0% | |
| TCTAACAGAAAGATAGGAAT+AGG | + | chr1_3:55076248-55076267 | None:intergenic | 30.0% | |
| TTGAATTGATATGCGCTATA+TGG | - | chr1_3:55076197-55076216 | Msa0126160:intron | 30.0% | |
| !! | AAATATCCAACTTTAAGGTG+TGG | + | chr1_3:55076414-55076433 | None:intergenic | 30.0% |
| CGGTTAAATATCCAACTTTA+AGG | + | chr1_3:55076419-55076438 | None:intergenic | 30.0% | |
| ! | GAAACGATCAGAATTCTTTT+TGG | - | chr1_3:55076479-55076498 | Msa0126160:intron | 30.0% |
| !!! | AGTTTTTTTATCCCCATTCA+TGG | + | chr1_3:55076716-55076735 | None:intergenic | 30.0% |
| CAATTGCTCTATATTGTCTT+TGG | + | chr1_3:55076956-55076975 | None:intergenic | 30.0% | |
| AAGACAATATAGAGCAATTG+TGG | - | chr1_3:55076956-55076975 | Msa0126160:intron | 30.0% | |
| !!! | TTAGTTTGCCATTTTTGCTA+TGG | - | chr1_3:55077078-55077097 | Msa0126160:intron | 30.0% |
| !! | TTTAGCCTTATATCAAAGCA+CGG | + | chr1_3:55077258-55077277 | None:intergenic | 30.0% |
| !! | TAATTACATTGGTGTTGAGT+CGG | + | chr1_3:55077312-55077331 | None:intergenic | 30.0% |
| ATCTTACTAAAACTTGGACT+TGG | + | chr1_3:55077347-55077366 | None:intergenic | 30.0% | |
| GTAAGATTATAAAGGGTTGA+TGG | - | chr1_3:55077360-55077379 | Msa0126160:intron | 30.0% | |
| ! | TAAAGAGATTCTCATGCTTT+TGG | + | chr1_3:55077413-55077432 | None:intergenic | 30.0% |
| AATCCACGACATTTAATAGA+TGG | + | chr1_3:55077752-55077771 | None:intergenic | 30.0% | |
| CAAGACATAACAGATGTAAA+AGG | + | chr1_3:55077825-55077844 | None:intergenic | 30.0% | |
| TCAAATTAGAGGATCAAACA+GGG | + | chr1_3:55077856-55077875 | None:intergenic | 30.0% | |
| ATCAAATTAGAGGATCAAAC+AGG | + | chr1_3:55077857-55077876 | None:intergenic | 30.0% | |
| ! | CCAATGAAGTATCAAATTAG+AGG | + | chr1_3:55077867-55077886 | None:intergenic | 30.0% |
| CCTCTAATTTGATACTTCAT+TGG | - | chr1_3:55077864-55077883 | Msa0126160:five_prime_UTR | 30.0% | |
| GATACTTCATTGGTATACAT+TGG | - | chr1_3:55077874-55077893 | Msa0126160:five_prime_UTR | 30.0% | |
| TTCATTGGTATACATTGGTA+AGG | - | chr1_3:55077879-55077898 | Msa0126160:five_prime_UTR | 30.0% | |
| !!! | GGTTTTGGAATGATGAATTG+GGG | + | chr1_3:55068974-55068993 | None:intergenic | 35.0% |
| !!! | GGGTTTTGGAATGATGAATT+GGG | + | chr1_3:55068975-55068994 | None:intergenic | 35.0% |
| !!! | AGGGTTTTGGAATGATGAAT+TGG | + | chr1_3:55068976-55068995 | None:intergenic | 35.0% |
| !!! | ATTTTGGAGTGTTAGGGTTT+TGG | + | chr1_3:55068989-55069008 | None:intergenic | 35.0% |
| !!! | TCAGACATTTTGGAGTGTTA+GGG | + | chr1_3:55068995-55069014 | None:intergenic | 35.0% |
| !!! | TTCAGACATTTTGGAGTGTT+AGG | + | chr1_3:55068996-55069015 | None:intergenic | 35.0% |
| !!! | AGATTCTGGTTCAGACATTT+TGG | + | chr1_3:55069005-55069024 | None:intergenic | 35.0% |
| !! | ATTCGATTTGGATTCTGGTT+CGG | + | chr1_3:55069077-55069096 | None:intergenic | 35.0% |
| TGTACTTGTTCTTGTGATTC+TGG | + | chr1_3:55069139-55069158 | None:intergenic | 35.0% | |
| ATCACAAGAACAAGTACAAC+TGG | - | chr1_3:55069141-55069160 | Msa0126160:three_prime_UTR | 35.0% | |
| ATCGTTGTTAACTTCTGGAT+CGG | + | chr1_3:55069188-55069207 | None:intergenic | 35.0% | |
| ATCAATTCCAATGAAGTCGT+TGG | - | chr1_3:55069229-55069248 | Msa0126160:CDS | 35.0% | |
| AGAGCTAACATCTTCTCTTT+CGG | + | chr1_3:55069353-55069372 | None:intergenic | 35.0% | |
| GATGAAATTGAAAGGTTGAG+CGG | + | chr1_3:55069389-55069408 | None:intergenic | 35.0% | |
| GCTCTAACGATGAAATTGAA+AGG | + | chr1_3:55069397-55069416 | None:intergenic | 35.0% | |
| AGTGGTTCATAGTTGAGAAA+TGG | - | chr1_3:55069624-55069643 | Msa0126160:intron | 35.0% | |
| !! | ATTTTTACACCGACTGTGTT+GGG | - | chr1_3:55069779-55069798 | Msa0126160:intron | 35.0% |
| ATGTTGGACAAGTTCTTACA+TGG | - | chr1_3:55069834-55069853 | Msa0126160:intron | 35.0% | |
| !!! | TGATTTGCTTTTGCTTCTCA+GGG | - | chr1_3:55070388-55070407 | Msa0126160:intron | 35.0% |
| ACAGTGCATCATAATCTTCA+GGG | + | chr1_3:55070488-55070507 | None:intergenic | 35.0% | |
| TACAGTGCATCATAATCTTC+AGG | + | chr1_3:55070489-55070508 | None:intergenic | 35.0% | |
| ! | TATGTAGTATTGAAGTGTGC+TGG | - | chr1_3:55070555-55070574 | Msa0126160:intron | 35.0% |
| ! | ATGTAGTATTGAAGTGTGCT+GGG | - | chr1_3:55070556-55070575 | Msa0126160:intron | 35.0% |
| GGCTTCATATCAATGTTGAT+AGG | - | chr1_3:55070638-55070657 | Msa0126160:intron | 35.0% | |
| TTGAGGGAGTTAAACTTAGT+TGG | - | chr1_3:55070669-55070688 | Msa0126160:intron | 35.0% | |
| GATAAAAAGAGGGGTTTAGA+AGG | - | chr1_3:55070754-55070773 | Msa0126160:intron | 35.0% | |
| !! | TGTCTTATTTAGTTGCCCAA+AGG | + | chr1_3:55070809-55070828 | None:intergenic | 35.0% |
| GACAATCTTGGAGAATTAAG+TGG | - | chr1_3:55070922-55070941 | Msa0126160:intron | 35.0% | |
| ! | CCTAGTAGTGTTATTGATTG+CGG | - | chr1_3:55071076-55071095 | Msa0126160:CDS | 35.0% |
| TATAGCCAATTTGTGAAGGA+CGG | + | chr1_3:55071177-55071196 | None:intergenic | 35.0% | |
| TGTCTCATGTAAGTTCAACT+AGG | + | chr1_3:55071247-55071266 | None:intergenic | 35.0% | |
| GCTTATCATAATAAGCGCTT+GGG | - | chr1_3:55071318-55071337 | Msa0126160:CDS | 35.0% | |
| TTTGGGAGAACTTGAGAAAA+CGG | + | chr1_3:55071455-55071474 | None:intergenic | 35.0% | |
| GCTTATTTGAGCTTATCTAC+TGG | + | chr1_3:55071497-55071516 | None:intergenic | 35.0% | |
| TCAAATAAGCCAATCCAAAC+AGG | - | chr1_3:55071507-55071526 | Msa0126160:CDS | 35.0% | |
| TGTTGCCTACAAATAAGAAG+AGG | - | chr1_3:55071572-55071591 | Msa0126160:intron | 35.0% | |
| GTTGCCTACAAATAAGAAGA+GGG | - | chr1_3:55071573-55071592 | Msa0126160:intron | 35.0% | |
| TTGCCTACAAATAAGAAGAG+GGG | - | chr1_3:55071574-55071593 | Msa0126160:intron | 35.0% | |
| !!! | TCTTGTCATTTTGAGAGTTG+AGG | - | chr1_3:55071616-55071635 | Msa0126160:intron | 35.0% |
| ! | TATTAGCTGACAGAAGTGTA+TGG | + | chr1_3:55071806-55071825 | None:intergenic | 35.0% |
| GAGAAAATGCAAAATACACG+AGG | + | chr1_3:55071843-55071862 | None:intergenic | 35.0% | |
| GTATGTTCGTAATGTATCCA+AGG | + | chr1_3:55071899-55071918 | None:intergenic | 35.0% | |
| GAATGAACTACTTCAAAGCT+TGG | + | chr1_3:55071963-55071982 | None:intergenic | 35.0% | |
| TTCATTCATTGTTTGCATGC+AGG | - | chr1_3:55071980-55071999 | Msa0126160:intron | 35.0% | |
| AGCTTGCAAAAAATATGACG+AGG | - | chr1_3:55072064-55072083 | Msa0126160:intron | 35.0% | |
| CTTACATACATCATGTAGTG+TGG | + | chr1_3:55072105-55072124 | None:intergenic | 35.0% | |
| CACACTACATGATGTATGTA+AGG | - | chr1_3:55072103-55072122 | Msa0126160:intron | 35.0% | |
| ! | GTGAAAAGTACGGATAAACT+AGG | + | chr1_3:55072809-55072828 | None:intergenic | 35.0% |
| TATCCAGGCTTACTACAATT+GGG | - | chr1_3:55072890-55072909 | Msa0126160:intron | 35.0% | |
| ! | TTTTACGCATATTTAGGCTC+TGG | - | chr1_3:55073018-55073037 | Msa0126160:intron | 35.0% |
| TTTACGCATATTTAGGCTCT+GGG | - | chr1_3:55073019-55073038 | Msa0126160:intron | 35.0% | |
| !!! | TTTTTTTTTTCCCAGGCAAC+AGG | - | chr1_3:55073194-55073213 | Msa0126160:intron | 35.0% |
| !!! | TTTTTTTTTCCCAGGCAACA+GGG | - | chr1_3:55073195-55073214 | Msa0126160:intron | 35.0% |
| AAAAAAGAGAGAAGAACCTG+AGG | + | chr1_3:55073257-55073276 | None:intergenic | 35.0% | |
| TTCGATGAGAGTCAGTAAAA+GGG | + | chr1_3:55073439-55073458 | None:intergenic | 35.0% | |
| ATTCGATGAGAGTCAGTAAA+AGG | + | chr1_3:55073440-55073459 | None:intergenic | 35.0% | |
| ACTCTCATCGAATCTATTTC+AGG | - | chr1_3:55073447-55073466 | Msa0126160:intron | 35.0% | |
| TTTCAGGCGCTTAATAATTG+GGG | - | chr1_3:55073463-55073482 | Msa0126160:intron | 35.0% | |
| !! | CATGCTTCTAATAGCTTGTT+AGG | - | chr1_3:55073582-55073601 | Msa0126160:intron | 35.0% |
| ! | TTTCATCCTTTTCTATGAGC+TGG | - | chr1_3:55073720-55073739 | Msa0126160:intron | 35.0% |
| !! | GTTTCATACCAAAAGCACTT+TGG | - | chr1_3:55073766-55073785 | Msa0126160:intron | 35.0% |
| ACATGATAACACTCTTGGAT+AGG | + | chr1_3:55073804-55073823 | None:intergenic | 35.0% | |
| ATGACTGTCTTGATACATAG+AGG | + | chr1_3:55073845-55073864 | None:intergenic | 35.0% | |
| GAACAATGTGTTCAAACACT+AGG | - | chr1_3:55073963-55073982 | Msa0126160:intron | 35.0% | |
| TCAATGTCAATCAATGCCAT+TGG | - | chr1_3:55074009-55074028 | Msa0126160:intron | 35.0% | |
| CAATGTCAATCAATGCCATT+GGG | - | chr1_3:55074010-55074029 | Msa0126160:intron | 35.0% | |
| GGAAGGGTCAATAAATTTCA+AGG | + | chr1_3:55074272-55074291 | None:intergenic | 35.0% | |
| GAGGGTTGGATAAAAGATTA+TGG | + | chr1_3:55074490-55074509 | None:intergenic | 35.0% | |
| AGAAAGCGAGAAATTCAAGA+GGG | + | chr1_3:55074508-55074527 | None:intergenic | 35.0% | |
| AAGAAAGCGAGAAATTCAAG+AGG | + | chr1_3:55074509-55074528 | None:intergenic | 35.0% | |
| !! | CCTAGTCTTGAAATACTATC+AGG | + | chr1_3:55074590-55074609 | None:intergenic | 35.0% |
| CCTGATAGTATTTCAAGACT+AGG | - | chr1_3:55074587-55074606 | Msa0126160:intron | 35.0% | |
| ! | AAGGGTTCACATTTTCCAAT+AGG | + | chr1_3:55074626-55074645 | None:intergenic | 35.0% |
| ATCCTTGTAGAACATTACTC+AGG | - | chr1_3:55074711-55074730 | Msa0126160:CDS | 35.0% | |
| TACCTGAGTAATGTTCTACA+AGG | + | chr1_3:55074716-55074735 | None:intergenic | 35.0% | |
| ! | TTGACCAAATTTTACATGGC+TGG | + | chr1_3:55074855-55074874 | None:intergenic | 35.0% |
| TAAACTACAAAAGGGGAACT+TGG | - | chr1_3:55074977-55074996 | Msa0126160:intron | 35.0% | |
| ACCAACAATAAACCCACAAT+TGG | + | chr1_3:55075045-55075064 | None:intergenic | 35.0% | |
| ! | TCCTGATTTGCATTTGTAAG+AGG | - | chr1_3:55075066-55075085 | Msa0126160:intron | 35.0% |
| !!! | ATTTTTTGCTTTTCTCGAGC+AGG | + | chr1_3:55075278-55075297 | None:intergenic | 35.0% |
| ! | AGTTGCAATTTGATTTCCAC+CGG | - | chr1_3:55075451-55075470 | Msa0126160:intron | 35.0% |
| TTCCAAGATTGTAAATTGCC+CGG | + | chr1_3:55075473-55075492 | None:intergenic | 35.0% | |
| TTACAATCTTGGAACTGTTC+TGG | - | chr1_3:55075479-55075498 | Msa0126160:intron | 35.0% | |
| ! | GATTGGCTGTACAATTCATT+TGG | + | chr1_3:55075685-55075704 | None:intergenic | 35.0% |
| GCTATGTGCATTATTTGGAT+TGG | - | chr1_3:55075796-55075815 | Msa0126160:intron | 35.0% | |
| ! | GTGCATTATTTGGATTGGAA+AGG | - | chr1_3:55075801-55075820 | Msa0126160:intron | 35.0% |
| CGCATATCAATTCAAGTAGA+AGG | + | chr1_3:55076192-55076211 | None:intergenic | 35.0% | |
| CGCATATCAATTCAAGTAGA+AGG | + | chr1_3:55076192-55076211 | None:intergenic | 35.0% | |
| GAATTCATTGGATAACCTCT+AGG | - | chr1_3:55076573-55076592 | Msa0126160:CDS | 35.0% | |
| AGTTCATGGATCAGTTTACT+TGG | - | chr1_3:55076822-55076841 | Msa0126160:intron | 35.0% | |
| AGAACAAGCCATAGCAAAAA+TGG | + | chr1_3:55077089-55077108 | None:intergenic | 35.0% | |
| ! | CTCTTGTTGTGCTATTGAAA+TGG | - | chr1_3:55077181-55077200 | Msa0126160:intron | 35.0% |
| ! | TTGTTGTGCTATTGAAATGG+TGG | - | chr1_3:55077184-55077203 | Msa0126160:intron | 35.0% |
| TAAAAAGGTCATGCCATCAA+GGG | + | chr1_3:55077217-55077236 | None:intergenic | 35.0% | |
| ATAAAAAGGTCATGCCATCA+AGG | + | chr1_3:55077218-55077237 | None:intergenic | 35.0% | |
| CTAAACCCTATGTATTTCCT+GGG | - | chr1_3:55077273-55077292 | Msa0126160:intron | 35.0% | |
| !! | AATTACATTGGTGTTGAGTC+GGG | + | chr1_3:55077311-55077330 | None:intergenic | 35.0% |
| CTCAATTTGACAGACCAAAT+TGG | + | chr1_3:55077621-55077640 | None:intergenic | 35.0% | |
| AGATGGCTAATGAGTAAACT+CGG | + | chr1_3:55077735-55077754 | None:intergenic | 35.0% | |
| TAGCCATCTATTAAATGTCG+TGG | - | chr1_3:55077746-55077765 | Msa0126160:CDS | 35.0% | |
| TTCTTCGTTCAGCATTGCAT+TGG | - | chr1_3:55068885-55068904 | Msa0126160:three_prime_UTR | 40.0% | |
| !!! | TGAGGTTCGTTTTGAGATTC+TGG | + | chr1_3:55069019-55069038 | None:intergenic | 40.0% |
| !! | TTCGATTTGGATTCTGGTTC+GGG | + | chr1_3:55069076-55069095 | None:intergenic | 40.0% |
| !! | TCGTGATTCGATTTGGATTC+TGG | + | chr1_3:55069082-55069101 | None:intergenic | 40.0% |
| ATCAGGTTCGTGATTCGATT+TGG | + | chr1_3:55069089-55069108 | None:intergenic | 40.0% | |
| ! | TGATTCTGGTTGTTCTGGTT+CGG | + | chr1_3:55069125-55069144 | None:intergenic | 40.0% |
| ! | TCTTGTGATTCTGGTTGTTC+TGG | + | chr1_3:55069130-55069149 | None:intergenic | 40.0% |
| AGAACAAGTACAACTGGAAC+CGG | - | chr1_3:55069147-55069166 | Msa0126160:three_prime_UTR | 40.0% | |
| TCGTTGTTAACTTCTGGATC+GGG | + | chr1_3:55069187-55069206 | None:intergenic | 40.0% | |
| TCTGCATCGTTGTTAACTTC+TGG | + | chr1_3:55069193-55069212 | None:intergenic | 40.0% | |
| GACTTCATTGGAATTGATCG+CGG | + | chr1_3:55069227-55069246 | None:intergenic | 40.0% | |
| ATTGGTACCAACGACTTCAT+TGG | + | chr1_3:55069239-55069258 | None:intergenic | 40.0% | |
| !!! | TCTTTTTTCAGCTGAGGATG+CGG | + | chr1_3:55069268-55069287 | None:intergenic | 40.0% |
| !!! | CCTTCATCTTTTTTCAGCTG+AGG | + | chr1_3:55069274-55069293 | None:intergenic | 40.0% |
| CCTCAGCTGAAAAAAGATGA+AGG | - | chr1_3:55069271-55069290 | Msa0126160:CDS | 40.0% | |
| ACCATGAGAGAATTGCTTCA+TGG | - | chr1_3:55069307-55069326 | Msa0126160:intron | 40.0% | |
| TCCATGAAGCAATTCTCTCA+TGG | + | chr1_3:55069311-55069330 | None:intergenic | 40.0% | |
| GAGCTAACATCTTCTCTTTC+GGG | + | chr1_3:55069352-55069371 | None:intergenic | 40.0% | |
| ! | AAGATGTTAGCTCTCCTTAC+AGG | - | chr1_3:55069359-55069378 | Msa0126160:intron | 40.0% |
| CTGATTAAAGATGTTGTGGC+CGG | - | chr1_3:55069519-55069538 | Msa0126160:intron | 40.0% | |
| !! | CATTTTTACACCGACTGTGT+TGG | - | chr1_3:55069778-55069797 | Msa0126160:intron | 40.0% |
| ! | AGAGCATAGCTCTGTATAGA+TGG | + | chr1_3:55069805-55069824 | None:intergenic | 40.0% |
| ATCTATACAGAGCTATGCTC+TGG | - | chr1_3:55069804-55069823 | Msa0126160:intron | 40.0% | |
| !! | ATGCTCTGGCTTTACTATGT+TGG | - | chr1_3:55069818-55069837 | Msa0126160:intron | 40.0% |
| TTTGGCGTAACTCATATGGT+TGG | - | chr1_3:55070010-55070029 | Msa0126160:CDS | 40.0% | |
| AGAACAGAACAATGCTGCTA+TGG | - | chr1_3:55070188-55070207 | Msa0126160:intron | 40.0% | |
| !! | GAGTTGATAAACAGCGTTGT+AGG | - | chr1_3:55070210-55070229 | Msa0126160:intron | 40.0% |
| ! | TTCTTACATTTGCTGCCAAG+AGG | - | chr1_3:55070265-55070284 | Msa0126160:intron | 40.0% |
| GTAGAACCTAGAAGTGATTG+TGG | + | chr1_3:55070293-55070312 | None:intergenic | 40.0% | |
| CATAACATATTCCTAGCGGT+AGG | + | chr1_3:55070315-55070334 | None:intergenic | 40.0% | |
| !!! | CTGATTTGCTTTTGCTTCTC+AGG | - | chr1_3:55070387-55070406 | Msa0126160:intron | 40.0% |
| ! | TTAGTTAGTAGTTGGTGCCT+TGG | - | chr1_3:55070692-55070711 | Msa0126160:intron | 40.0% |
| ! | TAGTTAGTAGTTGGTGCCTT+GGG | - | chr1_3:55070693-55070712 | Msa0126160:intron | 40.0% |
| TTTAATGATTCCAGCTCCCA+AGG | + | chr1_3:55070712-55070731 | None:intergenic | 40.0% | |
| AAAAAGAGGGGTTTAGAAGG+AGG | - | chr1_3:55070757-55070776 | Msa0126160:intron | 40.0% | |
| ATTTGAGAGTTGGGTCCTTT+GGG | - | chr1_3:55070791-55070810 | Msa0126160:intron | 40.0% | |
| ! | GAACTCTAGGAGAAACATCT+AGG | - | chr1_3:55070963-55070982 | Msa0126160:intron | 40.0% |
| CCGCAATCAATAACACTACT+AGG | + | chr1_3:55071079-55071098 | None:intergenic | 40.0% | |
| ! | GTAGTGTTATTGATTGCGGA+TGG | - | chr1_3:55071080-55071099 | Msa0126160:CDS | 40.0% |
| CTGCTATAGCCAATTTGTGA+AGG | + | chr1_3:55071181-55071200 | None:intergenic | 40.0% | |
| CACAAATTGGCTATAGCAGT+TGG | - | chr1_3:55071182-55071201 | Msa0126160:intron | 40.0% | |
| AGTTGGCAAGTATTCTGTCA+TGG | - | chr1_3:55071199-55071218 | Msa0126160:intron | 40.0% | |
| CGCTTATCATAATAAGCGCT+TGG | - | chr1_3:55071317-55071336 | Msa0126160:CDS | 40.0% | |
| GTTCGGGGCTACAAATAATT+AGG | - | chr1_3:55071539-55071558 | Msa0126160:intron | 40.0% | |
| ! | CAACCCCTCTTCTTATTTGT+AGG | + | chr1_3:55071580-55071599 | None:intergenic | 40.0% |
| !! | ATTTTGAGAGTTGAGGCCAT+TGG | - | chr1_3:55071623-55071642 | Msa0126160:intron | 40.0% |
| !! | TTTTGAGAGTTGAGGCCATT+GGG | - | chr1_3:55071624-55071643 | Msa0126160:intron | 40.0% |
| GGAAAATCTGTAATGACTGC+AGG | + | chr1_3:55071694-55071713 | None:intergenic | 40.0% | |
| TTAGAAGGTGAAGTGGAATC+TGG | + | chr1_3:55072026-55072045 | None:intergenic | 40.0% | |
| ! | AGCATCTTTAGAAGGTGAAG+TGG | + | chr1_3:55072033-55072052 | None:intergenic | 40.0% |
| ! | TCAAGCAGAGCATCTTTAGA+AGG | + | chr1_3:55072041-55072060 | None:intergenic | 40.0% |
| ! | TTCTAAAGATGCTCTGCTTG+AGG | - | chr1_3:55072040-55072059 | Msa0126160:intron | 40.0% |
| ATCGCTCTCAGTGAAAAGTA+CGG | + | chr1_3:55072819-55072838 | None:intergenic | 40.0% | |
| GTATCCAGGCTTACTACAAT+TGG | - | chr1_3:55072889-55072908 | Msa0126160:intron | 40.0% | |
| AAGAGCTATGGAAACAGGTT+AGG | - | chr1_3:55072964-55072983 | Msa0126160:intron | 40.0% | |
| TTACGCATATTTAGGCTCTG+GGG | - | chr1_3:55073020-55073039 | Msa0126160:intron | 40.0% | |
| TTAAAGCAGTCCAACTCAAC+TGG | - | chr1_3:55073225-55073244 | Msa0126160:intron | 40.0% | |
| TTAGCGTCTTCTTGTTGAAC+TGG | - | chr1_3:55073290-55073309 | Msa0126160:intron | 40.0% | |
| TCGATGAGAGTCAGTAAAAG+GGG | + | chr1_3:55073438-55073457 | None:intergenic | 40.0% | |
| AAAGCTCCAGCTCATAGAAA+AGG | + | chr1_3:55073729-55073748 | None:intergenic | 40.0% | |
| TTCAAACACTAGGTGTGACT+GGG | - | chr1_3:55073973-55073992 | Msa0126160:intron | 40.0% | |
| ! | TAATGGTTTCTCCGTTTTCG+CGG | - | chr1_3:55074090-55074109 | Msa0126160:intron | 40.0% |
| GGGTGCCAAAAAAATCCTAT+TGG | - | chr1_3:55074608-55074627 | Msa0126160:intron | 40.0% | |
| AGAATTGGATGAGCTAGTAG+TGG | + | chr1_3:55074681-55074700 | None:intergenic | 40.0% | |
| AGTGCCAGCCATGTAAAATT+TGG | - | chr1_3:55074848-55074867 | Msa0126160:intron | 40.0% | |
| GCCAATTGTGGGTTTATTGT+TGG | - | chr1_3:55075041-55075060 | Msa0126160:intron | 40.0% | |
| GCCTCTTACAAATGCAAATC+AGG | + | chr1_3:55075070-55075089 | None:intergenic | 40.0% | |
| GATTTGCATTTGTAAGAGGC+TGG | - | chr1_3:55075070-55075089 | Msa0126160:intron | 40.0% | |
| ! | ATGGCACTGAGTTCCTAAAT+TGG | + | chr1_3:55075251-55075270 | None:intergenic | 40.0% |
| CGGAACTGCATTGAAGAATA+AGG | + | chr1_3:55075420-55075439 | None:intergenic | 40.0% | |
| ATTGCAACTGTATGGCTGAA+CGG | + | chr1_3:55075440-55075459 | None:intergenic | 40.0% | |
| ! | GTTGCAATTTGATTTCCACC+GGG | - | chr1_3:55075452-55075471 | Msa0126160:intron | 40.0% |
| CATGTTATGCTCTGTTGTCT+TGG | - | chr1_3:55075538-55075557 | Msa0126160:intron | 40.0% | |
| !! | TTTACAGTACGGATTAGCAG+AGG | - | chr1_3:55075615-55075634 | Msa0126160:intron | 40.0% |
| ! | CAGAGGACACTTTAAGAACA+GGG | - | chr1_3:55075632-55075651 | Msa0126160:intron | 40.0% |
| ! | AGAGGACACTTTAAGAACAG+GGG | - | chr1_3:55075633-55075652 | Msa0126160:intron | 40.0% |
| TAGTTGCACCTCATAATGAC+TGG | - | chr1_3:55076457-55076476 | Msa0126160:intron | 40.0% | |
| GATCGTTTCCAGTCATTATG+AGG | + | chr1_3:55076468-55076487 | None:intergenic | 40.0% | |
| CATGAACTGTATCAATGCAG+AGG | + | chr1_3:55076810-55076829 | None:intergenic | 40.0% | |
| ! | CTCTGCATTGATACAGTTCA+TGG | - | chr1_3:55076808-55076827 | Msa0126160:intron | 40.0% |
| CCTACAACAAGTGTAGAAGA+AGG | + | chr1_3:55076901-55076920 | None:intergenic | 40.0% | |
| !! | CCTTCTTCTACACTTGTTGT+AGG | - | chr1_3:55076898-55076917 | Msa0126160:intron | 40.0% |
| ! | GCACTACTGGAAGCATAAAA+AGG | + | chr1_3:55077232-55077251 | None:intergenic | 40.0% |
| GCTAAACCCTATGTATTTCC+TGG | - | chr1_3:55077272-55077291 | Msa0126160:intron | 40.0% | |
| AGTCACCCAGGAAATACATA+GGG | + | chr1_3:55077281-55077300 | None:intergenic | 40.0% | |
| !! | ATTACATTGGTGTTGAGTCG+GGG | + | chr1_3:55077310-55077329 | None:intergenic | 40.0% |
| !! | TTATCAAGGTTGCTGACTCT+TGG | - | chr1_3:55077476-55077495 | Msa0126160:CDS | 40.0% |
| !! | TATCAAGGTTGCTGACTCTT+GGG | - | chr1_3:55077477-55077496 | Msa0126160:CDS | 40.0% |
| GTCTACACTATTTATGTGCG+AGG | - | chr1_3:55077535-55077554 | Msa0126160:CDS | 40.0% | |
| AGGCAAAAGTGATGTATTGG+CGG | - | chr1_3:55077555-55077574 | Msa0126160:CDS | 40.0% | |
| ! | GTATTGGCGGGTATTATAAC+AGG | - | chr1_3:55077568-55077587 | Msa0126160:CDS | 40.0% |
| ! | AGTTCGCAAAGAAGTGCAAA+AGG | + | chr1_3:55077661-55077680 | None:intergenic | 40.0% |
| ATGATGAATTGGGGAGAGGA+AGG | + | chr1_3:55068965-55068984 | None:intergenic | 45.0% | |
| TGGAATGATGAATTGGGGAG+AGG | + | chr1_3:55068969-55068988 | None:intergenic | 45.0% | |
| !! | TCGGGTTTTGATCCAGATTC+CGG | + | chr1_3:55069169-55069188 | None:intergenic | 45.0% |
| TATAGATGGCCCAACACAGT+CGG | + | chr1_3:55069791-55069810 | None:intergenic | 45.0% | |
| GTTCTTACATGGCTTTCCTC+TGG | - | chr1_3:55069845-55069864 | Msa0126160:intron | 45.0% | |
| ! | GCTTTCCTCTGGCTTCAATA+TGG | - | chr1_3:55069856-55069875 | Msa0126160:intron | 45.0% |
| TATGGTCCTCTGCTAGTAGA+CGG | - | chr1_3:55069874-55069893 | Msa0126160:intron | 45.0% | |
| ! | GCTGTTGCTGTTGACTATCT+TGG | + | chr1_3:55070164-55070183 | None:intergenic | 45.0% |
| !! | GTTGTAGGTGTTGATGAGGA+GGG | - | chr1_3:55070225-55070244 | Msa0126160:intron | 45.0% |
| GAAGTGATTGTGGTACCTCT+TGG | + | chr1_3:55070283-55070302 | None:intergenic | 45.0% | |
| ! | GAGGTACCACAATCACTTCT+AGG | - | chr1_3:55070284-55070303 | Msa0126160:CDS | 45.0% |
| ATTAGGAACCCTCCCTATCA+TGG | - | chr1_3:55070355-55070374 | Msa0126160:CDS | 45.0% | |
| TGCACTGTACAATTGGGCAT+TGG | - | chr1_3:55070500-55070519 | Msa0126160:intron | 45.0% | |
| !! | CAATTGGGCATTGGTACTTC+AGG | - | chr1_3:55070509-55070528 | Msa0126160:intron | 45.0% |
| CATTTGAGAGTTGGGTCCTT+TGG | - | chr1_3:55070790-55070809 | Msa0126160:intron | 45.0% | |
| ! | TGGTGTTGAAGCTCTGTTCT+TGG | - | chr1_3:55070842-55070861 | Msa0126160:intron | 45.0% |
| TTGGTAAGAGAGGATGCATG+TGG | - | chr1_3:55070996-55071015 | Msa0126160:intron | 45.0% | |
| TAAGAGAGGATGCATGTGGA+TGG | - | chr1_3:55071000-55071019 | Msa0126160:intron | 45.0% | |
| ! | GTGTTATTGATTGCGGATGG+TGG | - | chr1_3:55071083-55071102 | Msa0126160:CDS | 45.0% |
| AGACAGAGTTAGAGCCTGTT+TGG | - | chr1_3:55071262-55071281 | Msa0126160:intron | 45.0% | |
| TCATAAGGGCCTGTTTGGAT+TGG | + | chr1_3:55071519-55071538 | None:intergenic | 45.0% | |
| CAAACAGGCCCTTATGAGTT+CGG | - | chr1_3:55071522-55071541 | Msa0126160:intron | 45.0% | |
| AAACAGGCCCTTATGAGTTC+GGG | - | chr1_3:55071523-55071542 | Msa0126160:intron | 45.0% | |
| TTGTAGCCCCGAACTCATAA+GGG | + | chr1_3:55071533-55071552 | None:intergenic | 45.0% | |
| TTTGTAGCCCCGAACTCATA+AGG | + | chr1_3:55071534-55071553 | None:intergenic | 45.0% | |
| TAAGAAGAGGGGTTGTTGAG+AGG | - | chr1_3:55071585-55071604 | Msa0126160:intron | 45.0% | |
| AAGAAGAGGGGTTGTTGAGA+GGG | - | chr1_3:55071586-55071605 | Msa0126160:intron | 45.0% | |
| ATAAACCTCCCTATGCCCAA+TGG | + | chr1_3:55071642-55071661 | None:intergenic | 45.0% | |
| ATTGGGCATAGGGAGGTTTA+TGG | - | chr1_3:55071641-55071660 | Msa0126160:intron | 45.0% | |
| GCAGCATTGCGAAATTTCGA+AGG | + | chr1_3:55071668-55071687 | None:intergenic | 45.0% | |
| TGTTTGCATGCAGGAAAGTG+CGG | - | chr1_3:55071989-55072008 | Msa0126160:intron | 45.0% | |
| CATCATGTAGTGTGGGACAA+AGG | + | chr1_3:55072097-55072116 | None:intergenic | 45.0% | |
| !!! | CTAGTATTTTAGCTGTGCCC+AGG | + | chr1_3:55072216-55072235 | None:intergenic | 45.0% |
| ! | GTACTTTTCACTGAGAGCGA+TGG | - | chr1_3:55072818-55072837 | Msa0126160:intron | 45.0% |
| TTGCCCAATTGTAGTAAGCC+TGG | + | chr1_3:55072896-55072915 | None:intergenic | 45.0% | |
| CAAAGGAAGCTGAAGAGCTA+TGG | - | chr1_3:55072952-55072971 | Msa0126160:intron | 45.0% | |
| AGCTGAAGAGCTATGGAAAC+AGG | - | chr1_3:55072959-55072978 | Msa0126160:intron | 45.0% | |
| AACATAGTTCCCTGTTGCCT+GGG | + | chr1_3:55073207-55073226 | None:intergenic | 45.0% | |
| TAACATAGTTCCCTGTTGCC+TGG | + | chr1_3:55073208-55073227 | None:intergenic | 45.0% | |
| !!! | GAGCTGGAGCTTTTAACTTC+TGG | - | chr1_3:55073736-55073755 | Msa0126160:intron | 45.0% |
| GTTCAAACACTAGGTGTGAC+TGG | - | chr1_3:55073972-55073991 | Msa0126160:intron | 45.0% | |
| TCAAACACTAGGTGTGACTG+GGG | - | chr1_3:55073974-55073993 | Msa0126160:intron | 45.0% | |
| ! | AATGGTTTCTCCGTTTTCGC+GGG | - | chr1_3:55074091-55074110 | Msa0126160:intron | 45.0% |
| ! | GGGAGCTTACAAGAGGTTTT+AGG | + | chr1_3:55074198-55074217 | None:intergenic | 45.0% |
| GGCACTGTGTAATCTTGGAA+GGG | + | chr1_3:55074288-55074307 | None:intergenic | 45.0% | |
| ! | AGGCACTGTGTAATCTTGGA+AGG | + | chr1_3:55074289-55074308 | None:intergenic | 45.0% |
| !! | GACAAGGCACTGTGTAATCT+TGG | + | chr1_3:55074293-55074312 | None:intergenic | 45.0% |
| AGCGAGAAATTCAAGAGGGT+TGG | + | chr1_3:55074504-55074523 | None:intergenic | 45.0% | |
| AAGGAAGGGTTGCCAATTGT+GGG | - | chr1_3:55075030-55075049 | Msa0126160:intron | 45.0% | |
| CAATATTTGAAGGGGAGCCT+TGG | + | chr1_3:55075151-55075170 | None:intergenic | 45.0% | |
| ! | CTTTTCTCGAGCAGGAACAA+TGG | + | chr1_3:55075270-55075289 | None:intergenic | 45.0% |
| TGTACGAACTGCTATCAGCA+AGG | - | chr1_3:55075298-55075317 | Msa0126160:intron | 45.0% | |
| CAAGATTGTAAATTGCCCGG+TGG | + | chr1_3:55075470-55075489 | None:intergenic | 45.0% | |
| CACCGGGCAATTTACAATCT+TGG | - | chr1_3:55075468-55075487 | Msa0126160:intron | 45.0% | |
| ! | GCAGAGGACACTTTAAGAAC+AGG | - | chr1_3:55075631-55075650 | Msa0126160:intron | 45.0% |
| ! | GAGGACACTTTAAGAACAGG+GGG | - | chr1_3:55075634-55075653 | Msa0126160:intron | 45.0% |
| ! | AGGACACTTTAAGAACAGGG+GGG | - | chr1_3:55075635-55075654 | Msa0126160:intron | 45.0% |
| AGGTATATAGCAGTGCCTTG+CGG | - | chr1_3:55075941-55075960 | Msa0126160:intron | 45.0% | |
| !! | CCAACTTTAAGGTGTGGTAG+CGG | + | chr1_3:55076408-55076427 | None:intergenic | 45.0% |
| ATATTTAACCGCACCTCCTG+CGG | - | chr1_3:55076428-55076447 | Msa0126160:intron | 45.0% | |
| CGAAAAGCTTCAGCAGGTAA+TGG | - | chr1_3:55076506-55076525 | Msa0126160:intron | 45.0% | |
| ATTGGATAACCTCTAGGCTC+TGG | - | chr1_3:55076579-55076598 | Msa0126160:CDS | 45.0% | |
| TTTCTCATACCAGAGCCTAG+AGG | + | chr1_3:55076591-55076610 | None:intergenic | 45.0% | |
| CAAAGTCTCTCAACCAGATC+AGG | - | chr1_3:55076685-55076704 | Msa0126160:intron | 45.0% | |
| ATTCATGGCATCTCCTGATC+TGG | + | chr1_3:55076701-55076720 | None:intergenic | 45.0% | |
| AGATCAGGAGATGCCATGAA+TGG | - | chr1_3:55076700-55076719 | Msa0126160:intron | 45.0% | |
| GATCAGGAGATGCCATGAAT+GGG | - | chr1_3:55076701-55076720 | Msa0126160:intron | 45.0% | |
| ATCAGGAGATGCCATGAATG+GGG | - | chr1_3:55076702-55076721 | Msa0126160:intron | 45.0% | |
| GTTACAAGTTGTTGGGACTG+CGG | + | chr1_3:55077051-55077070 | None:intergenic | 45.0% | |
| GCACACCGTGCTTTGATATA+AGG | - | chr1_3:55077250-55077269 | Msa0126160:intron | 45.0% | |
| CAGTCACCCAGGAAATACAT+AGG | + | chr1_3:55077282-55077301 | None:intergenic | 45.0% | |
| CTATGTATTTCCTGGGTGAC+TGG | - | chr1_3:55077280-55077299 | Msa0126160:intron | 45.0% | |
| !! | TGCTGACTCTTGGGAATCAT+TGG | - | chr1_3:55077486-55077505 | Msa0126160:CDS | 45.0% |
| GACTCTTGGGAATCATTGGA+TGG | - | chr1_3:55077490-55077509 | Msa0126160:CDS | 45.0% | |
| CTTGGGAATCATTGGATGGA+TGG | - | chr1_3:55077494-55077513 | Msa0126160:CDS | 45.0% | |
| GCGAGGCAAAAGTGATGTAT+TGG | - | chr1_3:55077552-55077571 | Msa0126160:CDS | 45.0% | |
| ! | GGCAAAAGTGATGTATTGGC+GGG | - | chr1_3:55077556-55077575 | Msa0126160:CDS | 45.0% |
| ACACGCAAACACAGTAGACG+CGG | + | chr1_3:55068925-55068944 | None:intergenic | 50.0% | |
| GGAGAGGAAGGAGTTTCGAT+CGG | + | chr1_3:55068953-55068972 | None:intergenic | 50.0% | |
| ! | TGAGATTGTGGTTCGGGTGA+TGG | + | chr1_3:55069043-55069062 | None:intergenic | 50.0% |
| ATCACCCGAACCACAATCTC+AGG | - | chr1_3:55069042-55069061 | Msa0126160:three_prime_UTR | 50.0% | |
| TCCGTCCTGAGATTGTGGTT+CGG | + | chr1_3:55069050-55069069 | None:intergenic | 50.0% | |
| !! | TCGGTTTCTGGTTGAGGATC+AGG | + | chr1_3:55069106-55069125 | None:intergenic | 50.0% |
| !! | TCTGGTTCGGTTTCTGGTTG+AGG | + | chr1_3:55069112-55069131 | None:intergenic | 50.0% |
| !! | GGTTGTTCTGGTTCGGTTTC+TGG | + | chr1_3:55069118-55069137 | None:intergenic | 50.0% |
| GTACAACTGGAACCGGAATC+TGG | - | chr1_3:55069154-55069173 | Msa0126160:three_prime_UTR | 50.0% | |
| CTGAGGATGCGGTGAAGAAT+TGG | + | chr1_3:55069257-55069276 | None:intergenic | 50.0% | |
| GGTTGAGCGGAAAACCTGTA+AGG | + | chr1_3:55069376-55069395 | None:intergenic | 50.0% | |
| !! | TCACATGTCAGTGTCGACAC+CGG | + | chr1_3:55069541-55069560 | None:intergenic | 50.0% |
| !! | CAACGTGTCGGTTGTGTTAG+TGG | - | chr1_3:55069606-55069625 | Msa0126160:intron | 50.0% |
| GAGGACCATATTGAAGCCAG+AGG | + | chr1_3:55069864-55069883 | None:intergenic | 50.0% | |
| !! | GGTGGGATTAGTCCGTCTTT+GGG | - | chr1_3:55069895-55069914 | Msa0126160:intron | 50.0% |
| CTTGGTATCCTGCCCAAAGA+CGG | + | chr1_3:55069910-55069929 | None:intergenic | 50.0% | |
| !! | CAGCGTTGTAGGTGTTGATG+AGG | - | chr1_3:55070221-55070240 | Msa0126160:intron | 50.0% |
| !! | CGTTGTAGGTGTTGATGAGG+AGG | - | chr1_3:55070224-55070243 | Msa0126160:intron | 50.0% |
| !! | TAGGTGTTGATGAGGAGGGA+CGG | - | chr1_3:55070229-55070248 | Msa0126160:intron | 50.0% |
| TCTAGGTTCTACCTACCGCT+AGG | - | chr1_3:55070301-55070320 | Msa0126160:CDS | 50.0% | |
| CAGAAATCCCCGCCATGATA+GGG | + | chr1_3:55070370-55070389 | None:intergenic | 50.0% | |
| TCAGAAATCCCCGCCATGAT+AGG | + | chr1_3:55070371-55070390 | None:intergenic | 50.0% | |
| ! | TGCTTTTGCTTCTCAGGGAC+AGG | - | chr1_3:55070393-55070412 | Msa0126160:intron | 50.0% |
| ! | GCTTTTGCTTCTCAGGGACA+GGG | - | chr1_3:55070394-55070413 | Msa0126160:intron | 50.0% |
| ! | CTTTTGCTTCTCAGGGACAG+GGG | - | chr1_3:55070395-55070414 | Msa0126160:intron | 50.0% |
| GGTATGCTGCTGCTATTGAG+AGG | - | chr1_3:55070460-55070479 | Msa0126160:intron | 50.0% | |
| AAGCTCTGTTCTTGGAGCTG+TGG | - | chr1_3:55070850-55070869 | Msa0126160:intron | 50.0% | |
| AGCTCTGTTCTTGGAGCTGT+GGG | - | chr1_3:55070851-55070870 | Msa0126160:intron | 50.0% | |
| !! | GGATGGTGGATCATGACAGA+AGG | - | chr1_3:55071097-55071116 | Msa0126160:CDS | 50.0% |
| ! | GGCAGCATGGTGTTTTATGG+TGG | + | chr1_3:55071153-55071172 | None:intergenic | 50.0% |
| ! | GGTGGCAGCATGGTGTTTTA+TGG | + | chr1_3:55071156-55071175 | None:intergenic | 50.0% |
| TGCCACCGTCCTTCACAAAT+TGG | - | chr1_3:55071169-55071188 | Msa0126160:intron | 50.0% | |
| AGCCAATTTGTGAAGGACGG+TGG | + | chr1_3:55071174-55071193 | None:intergenic | 50.0% | |
| CGAACTCATAAGGGCCTGTT+TGG | + | chr1_3:55071524-55071543 | None:intergenic | 50.0% | |
| AACAGGCCCTTATGAGTTCG+GGG | - | chr1_3:55071524-55071543 | Msa0126160:intron | 50.0% | |
| AGTTGAGGCCATTGGGCATA+GGG | - | chr1_3:55071631-55071650 | Msa0126160:intron | 50.0% | |
| AGCCGAACAATAGCATGCCT+GGG | - | chr1_3:55072196-55072215 | Msa0126160:intron | 50.0% | |
| TGCCCAGGCATGCTATTGTT+CGG | + | chr1_3:55072201-55072220 | None:intergenic | 50.0% | |
| GAGGGTCTGCAAACATATGC+AGG | - | chr1_3:55072308-55072327 | Msa0126160:intron | 50.0% | |
| AGCCTGGATACAGTCAGACA+GGG | + | chr1_3:55072880-55072899 | None:intergenic | 50.0% | |
| AAGCCTGGATACAGTCAGAC+AGG | + | chr1_3:55072881-55072900 | None:intergenic | 50.0% | |
| TCTGATCGTGCAAAGATGCG+AGG | - | chr1_3:55072924-55072943 | Msa0126160:intron | 50.0% | |
| GCTCTTCAGCTTCCTTTGTG+CGG | + | chr1_3:55072950-55072969 | None:intergenic | 50.0% | |
| GAGGACTGTTCCAGTTGAGT+TGG | + | chr1_3:55073238-55073257 | None:intergenic | 50.0% | |
| ACTCAACTGGAACAGTCCTC+AGG | - | chr1_3:55073238-55073257 | Msa0126160:intron | 50.0% | |
| TAATTGGGGACTTGCGCTTC+AGG | - | chr1_3:55073477-55073496 | Msa0126160:intron | 50.0% | |
| CTAGGTGTGACTGGGGTATA+TGG | - | chr1_3:55073981-55074000 | Msa0126160:intron | 50.0% | |
| TGCATGTAGACCCGCGAAAA+CGG | + | chr1_3:55074104-55074123 | None:intergenic | 50.0% | |
| GGCATATGGGAGCTTACAAG+AGG | + | chr1_3:55074205-55074224 | None:intergenic | 50.0% | |
| CAAGGAAGGGTTGCCAATTG+TGG | - | chr1_3:55075029-55075048 | Msa0126160:intron | 50.0% | |
| ATATAGCAGTGCCTTGCGGT+TGG | - | chr1_3:55075945-55075964 | Msa0126160:intron | 50.0% | |
| CATAGATCGTACCAACCGCA+AGG | + | chr1_3:55075959-55075978 | None:intergenic | 50.0% | |
| ! | CTTGCGGTTGGTACGATCTA+TGG | - | chr1_3:55075957-55075976 | Msa0126160:intron | 50.0% |
| CCGCTACCACACCTTAAAGT+TGG | - | chr1_3:55076405-55076424 | Msa0126160:intron | 50.0% | |
| TATTTAACCGCACCTCCTGC+GGG | - | chr1_3:55076429-55076448 | Msa0126160:intron | 50.0% | |
| GGATCACGAAAAGCTTCAGC+AGG | - | chr1_3:55076500-55076519 | Msa0126160:intron | 50.0% | |
| TTACATGCCTCCCTTCGTAC+AGG | - | chr1_3:55076633-55076652 | Msa0126160:intron | 50.0% | |
| ACTCTGGGTACCTGTACGAA+GGG | + | chr1_3:55076646-55076665 | None:intergenic | 50.0% | |
| AACTCTGGGTACCTGTACGA+AGG | + | chr1_3:55076647-55076666 | None:intergenic | 50.0% | |
| AGGTACCCAGAGTTGAACAG+AGG | - | chr1_3:55076653-55076672 | Msa0126160:intron | 50.0% | |
| GCTTGCCTCTGTTCAACTCT+GGG | + | chr1_3:55076661-55076680 | None:intergenic | 50.0% | |
| TGCTTGCCTCTGTTCAACTC+TGG | + | chr1_3:55076662-55076681 | None:intergenic | 50.0% | |
| TGGTGGAAACAGACCCTTGA+TGG | - | chr1_3:55077201-55077220 | Msa0126160:intron | 50.0% | |
| GGAATCATTGGATGGATGGC+TGG | - | chr1_3:55077498-55077517 | Msa0126160:CDS | 50.0% | |
| ACGCAAACACAGTAGACGCG+GGG | + | chr1_3:55068923-55068942 | None:intergenic | 55.0% | |
| CACGCAAACACAGTAGACGC+GGG | + | chr1_3:55068924-55068943 | None:intergenic | 55.0% | |
| ! | TGTGGTTCGGGTGATGGTTG+AGG | + | chr1_3:55069037-55069056 | None:intergenic | 55.0% |
| CCGTCCTGAGATTGTGGTTC+GGG | + | chr1_3:55069049-55069068 | None:intergenic | 55.0% | |
| CCCGAACCACAATCTCAGGA+CGG | - | chr1_3:55069046-55069065 | Msa0126160:three_prime_UTR | 55.0% | |
| GTCCTCTGCTAGTAGACGGT+GGG | - | chr1_3:55069878-55069897 | Msa0126160:intron | 55.0% | |
| ATCCCACCGTCTACTAGCAG+AGG | + | chr1_3:55069883-55069902 | None:intergenic | 55.0% | |
| !! | CGGTGGGATTAGTCCGTCTT+TGG | - | chr1_3:55069894-55069913 | Msa0126160:intron | 55.0% |
| !! | GGATTAGTCCGTCTTTGGGC+AGG | - | chr1_3:55069899-55069918 | Msa0126160:intron | 55.0% |
| TTGATGAGGAGGGACGGTCT+AGG | - | chr1_3:55070235-55070254 | Msa0126160:intron | 55.0% | |
| AGGAACCCTCCCTATCATGG+CGG | - | chr1_3:55070358-55070377 | Msa0126160:CDS | 55.0% | |
| AATCCCCGCCATGATAGGGA+GGG | + | chr1_3:55070366-55070385 | None:intergenic | 55.0% | |
| AAATCCCCGCCATGATAGGG+AGG | + | chr1_3:55070367-55070386 | None:intergenic | 55.0% | |
| GCTCTGTTCTTGGAGCTGTG+GGG | - | chr1_3:55070852-55070871 | Msa0126160:intron | 55.0% | |
| GAGTTGAGGCCATTGGGCAT+AGG | - | chr1_3:55071630-55071649 | Msa0126160:intron | 55.0% | |
| TAGTGTGGGACAAAGGCGAG+TGG | + | chr1_3:55072090-55072109 | None:intergenic | 55.0% | |
| GAGCCGAACAATAGCATGCC+TGG | - | chr1_3:55072195-55072214 | Msa0126160:intron | 55.0% | |
| TCCCCTGTCTGACTGTATCC+AGG | - | chr1_3:55072875-55072894 | Msa0126160:intron | 55.0% | |
| GCCTGGATACAGTCAGACAG+GGG | + | chr1_3:55072879-55072898 | None:intergenic | 55.0% | |
| AAAGATGCGAGGCCGCACAA+AGG | - | chr1_3:55072935-55072954 | Msa0126160:intron | 55.0% | |
| ATTTAACCGCACCTCCTGCG+GGG | - | chr1_3:55076430-55076449 | Msa0126160:intron | 55.0% | |
| GCTGATCTGACTTTGCCACC+TGG | - | chr1_3:55076778-55076797 | Msa0126160:intron | 55.0% | |
| AGTTGTTGGGACTGCGGAAG+TGG | + | chr1_3:55077045-55077064 | None:intergenic | 55.0% | |
| CAAAGCACGGTGTGCACTAC+TGG | + | chr1_3:55077245-55077264 | None:intergenic | 55.0% | |
| !! | CATTGGTGTTGAGTCGGGGA+GGG | + | chr1_3:55077306-55077325 | None:intergenic | 55.0% |
| !! | ACATTGGTGTTGAGTCGGGG+AGG | + | chr1_3:55077307-55077326 | None:intergenic | 55.0% |
| CAAACACAGTAGACGCGGGG+AGG | + | chr1_3:55068920-55068939 | None:intergenic | 60.0% | |
| GGTGCTCCGTCCTGAGATTG+TGG | + | chr1_3:55069055-55069074 | None:intergenic | 60.0% | |
| GGTCCTCTGCTAGTAGACGG+TGG | - | chr1_3:55069877-55069896 | Msa0126160:intron | 60.0% | |
| AGGAGGGACGGTCTAGGCAA+CGG | - | chr1_3:55070241-55070260 | Msa0126160:intron | 60.0% | |
| GGAACCCTCCCTATCATGGC+GGG | - | chr1_3:55070359-55070378 | Msa0126160:CDS | 60.0% | |
| GAACCCTCCCTATCATGGCG+GGG | - | chr1_3:55070360-55070379 | Msa0126160:CDS | 60.0% | |
| ! | GTAGTTGGTGCCTTGGGAGC+TGG | - | chr1_3:55070699-55070718 | Msa0126160:intron | 60.0% |
| TGTGAAGGACGGTGGCAGCA+TGG | + | chr1_3:55071166-55071185 | None:intergenic | 60.0% | |
| TGAGGCCATTGGGCATAGGG+AGG | - | chr1_3:55071634-55071653 | Msa0126160:intron | 60.0% | |
| TTTAACCGCACCTCCTGCGG+GGG | - | chr1_3:55076431-55076450 | Msa0126160:intron | 60.0% | |
| CTGGGTACCTGTACGAAGGG+AGG | + | chr1_3:55076643-55076662 | None:intergenic | 60.0% | |
| CTGACTTTGCCACCTGGTGC+TGG | - | chr1_3:55076784-55076803 | Msa0126160:intron | 60.0% | |
| TCAATGCAGAGGCCAGCACC+AGG | + | chr1_3:55076799-55076818 | None:intergenic | 60.0% | |
| TATTGCCCCCGCAGGAGGTG+CGG | + | chr1_3:55076439-55076458 | None:intergenic | 65.0% | |
| GCAACTATTGCCCCCGCAGG+AGG | + | chr1_3:55076444-55076463 | None:intergenic | 65.0% | |
| GGTGCAACTATTGCCCCCGC+AGG | + | chr1_3:55076447-55076466 | None:intergenic | 65.0% | |
| ATGCAGAGGCCAGCACCAGG+TGG | + | chr1_3:55076796-55076815 | None:intergenic | 65.0% | |
| TCGGGGAGGGCCAGTCACCC+AGG | + | chr1_3:55077293-55077312 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 55068870 | 55077924 | 55068870 | ID=Msa0126160;Name=Msa0126160 |
| chr1_3 | mRNA | 55068870 | 55077924 | 55068870 | ID=Msa0126160-mRNA-1;Parent=Msa0126160;Name=Msa0126160-mRNA-1;_AED=0.13;_eAED=0.13;_QI=137|1|1|1|1|1|14|330|520 |
| chr1_3 | exon | 55068870 | 55069310 | 55068870 | ID=Msa0126160-mRNA-1:exon:17041;Parent=Msa0126160-mRNA-1 |
| chr1_3 | exon | 55069951 | 55070139 | 55069951 | ID=Msa0126160-mRNA-1:exon:17040;Parent=Msa0126160-mRNA-1 |
| chr1_3 | exon | 55070273 | 55070392 | 55070273 | ID=Msa0126160-mRNA-1:exon:17039;Parent=Msa0126160-mRNA-1 |
| chr1_3 | exon | 55070816 | 55070851 | 55070816 | ID=Msa0126160-mRNA-1:exon:17038;Parent=Msa0126160-mRNA-1 |
| chr1_3 | exon | 55071044 | 55071172 | 55071044 | ID=Msa0126160-mRNA-1:exon:17037;Parent=Msa0126160-mRNA-1 |
| chr1_3 | exon | 55071294 | 55071359 | 55071294 | ID=Msa0126160-mRNA-1:exon:17036;Parent=Msa0126160-mRNA-1 |
| chr1_3 | exon | 55071475 | 55071537 | 55071475 | ID=Msa0126160-mRNA-1:exon:17035;Parent=Msa0126160-mRNA-1 |
| chr1_3 | exon | 55073296 | 55073325 | 55073296 | ID=Msa0126160-mRNA-1:exon:17034;Parent=Msa0126160-mRNA-1 |
| chr1_3 | exon | 55073535 | 55073585 | 55073535 | ID=Msa0126160-mRNA-1:exon:17033;Parent=Msa0126160-mRNA-1 |
| chr1_3 | exon | 55073814 | 55073897 | 55073814 | ID=Msa0126160-mRNA-1:exon:17032;Parent=Msa0126160-mRNA-1 |
| chr1_3 | exon | 55074679 | 55074792 | 55074679 | ID=Msa0126160-mRNA-1:exon:17031;Parent=Msa0126160-mRNA-1 |
| chr1_3 | exon | 55076264 | 55076333 | 55076264 | ID=Msa0126160-mRNA-1:exon:17030;Parent=Msa0126160-mRNA-1 |
| chr1_3 | exon | 55076508 | 55076633 | 55076508 | ID=Msa0126160-mRNA-1:exon:17029;Parent=Msa0126160-mRNA-1 |
| chr1_3 | exon | 55077414 | 55077924 | 55077414 | ID=Msa0126160-mRNA-1:exon:17028;Parent=Msa0126160-mRNA-1 |
| chr1_3 | five_prime_UTR | 55077788 | 55077924 | 55077788 | ID=Msa0126160-mRNA-1:five_prime_utr;Parent=Msa0126160-mRNA-1 |
| chr1_3 | CDS | 55077414 | 55077787 | 55077414 | ID=Msa0126160-mRNA-1:cds;Parent=Msa0126160-mRNA-1 |
| chr1_3 | CDS | 55076508 | 55076633 | 55076508 | ID=Msa0126160-mRNA-1:cds;Parent=Msa0126160-mRNA-1 |
| chr1_3 | CDS | 55076264 | 55076333 | 55076264 | ID=Msa0126160-mRNA-1:cds;Parent=Msa0126160-mRNA-1 |
| chr1_3 | CDS | 55074679 | 55074792 | 55074679 | ID=Msa0126160-mRNA-1:cds;Parent=Msa0126160-mRNA-1 |
| chr1_3 | CDS | 55073814 | 55073897 | 55073814 | ID=Msa0126160-mRNA-1:cds;Parent=Msa0126160-mRNA-1 |
| chr1_3 | CDS | 55073535 | 55073585 | 55073535 | ID=Msa0126160-mRNA-1:cds;Parent=Msa0126160-mRNA-1 |
| chr1_3 | CDS | 55073296 | 55073325 | 55073296 | ID=Msa0126160-mRNA-1:cds;Parent=Msa0126160-mRNA-1 |
| chr1_3 | CDS | 55071475 | 55071537 | 55071475 | ID=Msa0126160-mRNA-1:cds;Parent=Msa0126160-mRNA-1 |
| chr1_3 | CDS | 55071294 | 55071359 | 55071294 | ID=Msa0126160-mRNA-1:cds;Parent=Msa0126160-mRNA-1 |
| chr1_3 | CDS | 55071044 | 55071172 | 55071044 | ID=Msa0126160-mRNA-1:cds;Parent=Msa0126160-mRNA-1 |
| chr1_3 | CDS | 55070816 | 55070851 | 55070816 | ID=Msa0126160-mRNA-1:cds;Parent=Msa0126160-mRNA-1 |
| chr1_3 | CDS | 55070273 | 55070392 | 55070273 | ID=Msa0126160-mRNA-1:cds;Parent=Msa0126160-mRNA-1 |
| chr1_3 | CDS | 55069951 | 55070139 | 55069951 | ID=Msa0126160-mRNA-1:cds;Parent=Msa0126160-mRNA-1 |
| chr1_3 | CDS | 55069200 | 55069310 | 55069200 | ID=Msa0126160-mRNA-1:cds;Parent=Msa0126160-mRNA-1 |
| chr1_3 | three_prime_UTR | 55068870 | 55069199 | 55068870 | ID=Msa0126160-mRNA-1:three_prime_utr;Parent=Msa0126160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
