Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0433530 | XP_003603563.1 | 97.455 | 393 | 9 | 1 | 1 | 393 | 1 | 392 | 0.0 | 791 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0433530 | sp|Q8VZQ0|NRX3_ARATH | 60.106 | 376 | 150 | 0 | 11 | 386 | 11 | 386 | 1.78e-172 | 489 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0433530 | G7J2U5 | 97.455 | 393 | 9 | 1 | 1 | 393 | 1 | 392 | 0.0 | 791 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010760 | Msa0433530 | 0.810478 | 1.130225e-50 | -8.615850e-47 |
| Msa0014800 | Msa0433530 | 0.800253 | 1.572127e-48 | -8.615850e-47 |
| Msa0015090 | Msa0433530 | 0.837465 | 5.117029e-57 | -8.615850e-47 |
| Msa0017320 | Msa0433530 | 0.808477 | 3.038056e-50 | -8.615850e-47 |
| Msa0037880 | Msa0433530 | 0.829426 | 5.183140e-55 | -8.615850e-47 |
| Msa0043730 | Msa0433530 | 0.839507 | 1.520101e-57 | -8.615850e-47 |
| Msa0049750 | Msa0433530 | 0.839826 | 1.255978e-57 | -8.615850e-47 |
| Msa0051210 | Msa0433530 | 0.809024 | 2.321726e-50 | -8.615850e-47 |
| Msa0051450 | Msa0433530 | 0.821042 | 4.983578e-53 | -8.615850e-47 |
| Msa0051860 | Msa0433530 | 0.800938 | 1.139523e-48 | -8.615850e-47 |
| Msa0051930 | Msa0433530 | 0.805264 | 1.451597e-49 | -8.615850e-47 |
| Msa0052030 | Msa0433530 | 0.855899 | 4.627195e-62 | -8.615850e-47 |
| Msa0061150 | Msa0433530 | 0.841889 | 3.612630e-58 | -8.615850e-47 |
| Msa0064300 | Msa0433530 | 0.803853 | 2.858428e-49 | -8.615850e-47 |
| Msa0065950 | Msa0433530 | 0.834483 | 2.919517e-56 | -8.615850e-47 |
| Msa0078750 | Msa0433530 | 0.804756 | 1.853721e-49 | -8.615850e-47 |
| Msa0084430 | Msa0433530 | 0.827391 | 1.605196e-54 | -8.615850e-47 |
| Msa0085720 | Msa0433530 | 0.817742 | 2.815702e-52 | -8.615850e-47 |
| Msa0090390 | Msa0433530 | 0.809245 | 2.081716e-50 | -8.615850e-47 |
| Msa0092990 | Msa0433530 | 0.817686 | 2.899270e-52 | -8.615850e-47 |
| Msa0096980 | Msa0433530 | 0.804248 | 2.366072e-49 | -8.615850e-47 |
| Msa0101830 | Msa0433530 | 0.824134 | 9.512584e-54 | -8.615850e-47 |
| Msa0102120 | Msa0433530 | 0.812040 | 5.178374e-51 | -8.615850e-47 |
| Msa0105700 | Msa0433530 | 0.850314 | 1.839929e-60 | -8.615850e-47 |
| Msa0108560 | Msa0433530 | 0.837050 | 6.532276e-57 | -8.615850e-47 |
| Msa0120340 | Msa0433530 | 0.837083 | 6.408177e-57 | -8.615850e-47 |
| Msa0124550 | Msa0433530 | 0.804744 | 1.864981e-49 | -8.615850e-47 |
| Msa0130520 | Msa0433530 | 0.844805 | 6.022630e-59 | -8.615850e-47 |
| Msa0137570 | Msa0433530 | 0.815702 | 8.072585e-52 | -8.615850e-47 |
| Msa0137870 | Msa0433530 | 0.801406 | 9.139428e-49 | -8.615850e-47 |
| Msa0138220 | Msa0433530 | 0.806316 | 8.727016e-50 | -8.615850e-47 |
| Msa0142280 | Msa0433530 | 0.807173 | 5.753489e-50 | -8.615850e-47 |
| Msa0144620 | Msa0433530 | 0.812742 | 3.638662e-51 | -8.615850e-47 |
| Msa0145010 | Msa0433530 | 0.804709 | 1.896184e-49 | -8.615850e-47 |
| Msa0152170 | Msa0433530 | 0.854918 | 8.935529e-62 | -8.615850e-47 |
| Msa0153830 | Msa0433530 | 0.833853 | 4.200711e-56 | -8.615850e-47 |
| Msa0155340 | Msa0433530 | 0.816933 | 4.283483e-52 | -8.615850e-47 |
| Msa0159770 | Msa0433530 | 0.808516 | 2.980691e-50 | -8.615850e-47 |
| Msa0169820 | Msa0433530 | 0.812008 | 5.260841e-51 | -8.615850e-47 |
| Msa0175050 | Msa0433530 | 0.821436 | 4.042458e-53 | -8.615850e-47 |
| Msa0176330 | Msa0433530 | 0.829621 | 4.647276e-55 | -8.615850e-47 |
| Msa0182570 | Msa0433530 | 0.819046 | 1.426238e-52 | -8.615850e-47 |
| Msa0183410 | Msa0433530 | 0.801811 | 7.550184e-49 | -8.615850e-47 |
| Msa0187060 | Msa0433530 | 0.808695 | 2.729739e-50 | -8.615850e-47 |
| Msa0187220 | Msa0433530 | 0.813550 | 2.418751e-51 | -8.615850e-47 |
| Msa0206010 | Msa0433530 | 0.813928 | 1.996823e-51 | -8.615850e-47 |
| Msa0216530 | Msa0433530 | 0.807346 | 5.286436e-50 | -8.615850e-47 |
| Msa0220440 | Msa0433530 | 0.803356 | 3.624605e-49 | -8.615850e-47 |
| Msa0225470 | Msa0433530 | 0.839103 | 1.935612e-57 | -8.615850e-47 |
| Msa0226180 | Msa0433530 | 0.808254 | 3.389950e-50 | -8.615850e-47 |
| Msa0365490 | Msa0433530 | 0.806541 | 7.823032e-50 | -8.615850e-47 |
| Msa0376910 | Msa0433530 | 0.803452 | 3.462587e-49 | -8.615850e-47 |
| Msa0379640 | Msa0433530 | 0.808808 | 2.581616e-50 | -8.615850e-47 |
| Msa0383350 | Msa0433530 | 0.868234 | 7.595082e-66 | -8.615850e-47 |
| Msa0388840 | Msa0433530 | 0.820376 | 7.086424e-53 | -8.615850e-47 |
| Msa0389810 | Msa0433530 | 0.876839 | 1.014885e-68 | -8.615850e-47 |
| Msa0392710 | Msa0433530 | 0.801354 | 9.365957e-49 | -8.615850e-47 |
| Msa0394340 | Msa0433530 | 0.861087 | 1.312438e-63 | -8.615850e-47 |
| Msa0404030 | Msa0433530 | 0.800825 | 1.201884e-48 | -8.615850e-47 |
| Msa0412840 | Msa0433530 | 0.800638 | 1.312056e-48 | -8.615850e-47 |
| Msa0427910 | Msa0433530 | 0.803322 | 3.684414e-49 | -8.615850e-47 |
| Msa0433530 | Msa0436190 | 0.829589 | 4.729948e-55 | -8.615850e-47 |
| Msa0433530 | Msa0438040 | 0.822890 | 1.859273e-53 | -8.615850e-47 |
| Msa0433530 | Msa0440600 | 0.812550 | 4.007922e-51 | -8.615850e-47 |
| Msa0433530 | Msa0442200 | 0.831461 | 1.647886e-55 | -8.615850e-47 |
| Msa0433530 | Msa0464900 | 0.814511 | 1.484423e-51 | -8.615850e-47 |
| Msa0433530 | Msa0468130 | 0.878817 | 2.066192e-69 | -8.615850e-47 |
| Msa0433530 | Msa0471900 | 0.804817 | 1.800139e-49 | -8.615850e-47 |
| Msa0433530 | Msa0473240 | 0.805590 | 1.240419e-49 | -8.615850e-47 |
| Msa0433530 | Msa0477260 | 0.968927 | 2.232019e-129 | -8.615850e-47 |
| Msa0433530 | Msa0482190 | -0.820014 | 8.580662e-53 | -8.615850e-47 |
| Msa0433530 | Msa0484780 | 0.805842 | 1.098015e-49 | -8.615850e-47 |
| Msa0433530 | Msa0485500 | -0.812177 | 4.833449e-51 | -8.615850e-47 |
| Msa0433530 | Msa0488270 | 0.824388 | 8.294822e-54 | -8.615850e-47 |
| Msa0433530 | Msa0489610 | 0.876083 | 1.850369e-68 | -8.615850e-47 |
| Msa0433530 | Msa0500720 | 0.816720 | 4.781187e-52 | -8.615850e-47 |
| Msa0433530 | Msa0517490 | 0.807896 | 4.040423e-50 | -8.615850e-47 |
| Msa0433530 | Msa0524600 | 0.822439 | 2.367230e-53 | -8.615850e-47 |
| Msa0433530 | Msa0526410 | 0.814121 | 1.810645e-51 | -8.615850e-47 |
| Msa0433530 | Msa0530650 | 0.820580 | 6.364760e-53 | -8.615850e-47 |
| Msa0433530 | Msa0531550 | 0.824557 | 7.568971e-54 | -8.615850e-47 |
| Msa0433530 | Msa0534410 | 0.861220 | 1.195402e-63 | -8.615850e-47 |
| Msa0433530 | Msa0549780 | 0.801518 | 8.670319e-49 | -8.615850e-47 |
| Msa0433530 | Msa0562440 | 0.819605 | 1.063616e-52 | -8.615850e-47 |
| Msa0433530 | Msa0570330 | 0.834452 | 2.973283e-56 | -8.615850e-47 |
| Msa0433530 | Msa0587030 | 0.826034 | 3.385484e-54 | -8.615850e-47 |
| Msa0433530 | Msa0587190 | 0.831656 | 1.475076e-55 | -8.615850e-47 |
| Msa0433530 | Msa0588240 | 0.841418 | 4.810932e-58 | -8.615850e-47 |
| Msa0433530 | Msa0590650 | 0.842104 | 3.169347e-58 | -8.615850e-47 |
| Msa0433530 | Msa0591710 | 0.815128 | 1.083353e-51 | -8.615850e-47 |
| Msa0433530 | Msa0599580 | 0.817453 | 3.271947e-52 | -8.615850e-47 |
| Msa0433530 | Msa0608710 | 0.826289 | 2.943105e-54 | -8.615850e-47 |
| Msa0433530 | Msa0615340 | 0.816792 | 4.607118e-52 | -8.615850e-47 |
| Msa0433530 | Msa0626850 | 0.828837 | 7.198813e-55 | -8.615850e-47 |
| Msa0433530 | Msa0626990 | 0.818968 | 1.485648e-52 | -8.615850e-47 |
| Msa0433530 | Msa0627350 | 0.820539 | 6.502537e-53 | -8.615850e-47 |
| Msa0433530 | Msa0628740 | 0.833545 | 5.015062e-56 | -8.615850e-47 |
| Msa0433530 | Msa0630950 | 0.857817 | 1.260768e-62 | -8.615850e-47 |
| Msa0433530 | Msa0631980 | 0.805482 | 1.306877e-49 | -8.615850e-47 |
| Msa0433530 | Msa0631990 | 0.810189 | 1.304742e-50 | -8.615850e-47 |
| Msa0433530 | Msa0649130 | 0.811141 | 8.119385e-51 | -8.615850e-47 |
| Msa0433530 | Msa0653490 | 0.830001 | 3.754544e-55 | -8.615850e-47 |
| Msa0433530 | Msa0660300 | 0.829255 | 5.700766e-55 | -8.615850e-47 |
| Msa0433530 | Msa0662650 | 0.800547 | 1.369119e-48 | -8.615850e-47 |
| Msa0433530 | Msa0664970 | 0.809430 | 1.899370e-50 | -8.615850e-47 |
| Msa0433530 | Msa0666140 | 0.832642 | 8.414103e-56 | -8.615850e-47 |
| Msa0433530 | Msa0669190 | 0.825570 | 4.362908e-54 | -8.615850e-47 |
| Msa0433530 | Msa0670660 | 0.829375 | 5.331976e-55 | -8.615850e-47 |
| Msa0433530 | Msa0673470 | 0.819147 | 1.353205e-52 | -8.615850e-47 |
| Msa0433530 | Msa0679550 | 0.837275 | 5.723046e-57 | -8.615850e-47 |
| Msa0433530 | Msa0692110 | 0.838937 | 2.137161e-57 | -8.615850e-47 |
| Msa0433530 | Msa0693790 | 0.800698 | 1.275325e-48 | -8.615850e-47 |
| Msa0433530 | Msa0696420 | 0.811187 | 7.935492e-51 | -8.615850e-47 |
| Msa0433530 | Msa0704730 | 0.831498 | 1.613602e-55 | -8.615850e-47 |
| Msa0433530 | Msa0715410 | 0.801342 | 9.422244e-49 | -8.615850e-47 |
| Msa0433530 | Msa0724560 | 0.823459 | 1.369232e-53 | -8.615850e-47 |
| Msa0433530 | Msa0731180 | 0.861839 | 7.738659e-64 | -8.615850e-47 |
| Msa0433530 | Msa0747260 | 0.830903 | 2.259798e-55 | -8.615850e-47 |
| Msa0433530 | Msa0748070 | 0.800406 | 1.462794e-48 | -8.615850e-47 |
| Msa0433530 | Msa0751210 | 0.809688 | 1.671692e-50 | -8.615850e-47 |
| Msa0433530 | Msa0763400 | 0.804782 | 1.831403e-49 | -8.615850e-47 |
| Msa0433530 | Msa0765180 | 0.819010 | 1.453780e-52 | -8.615850e-47 |
| Msa0433530 | Msa0771580 | 0.840435 | 8.713366e-58 | -8.615850e-47 |
| Msa0433530 | Msa0771720 | 0.800785 | 1.224387e-48 | -8.615850e-47 |
| Msa0433530 | Msa0786070 | 0.800904 | 1.157810e-48 | -8.615850e-47 |
| Msa0433530 | Msa0788540 | 0.802885 | 4.536878e-49 | -8.615850e-47 |
| Msa0433530 | Msa0792090 | 0.818253 | 2.158880e-52 | -8.615850e-47 |
| Msa0433530 | Msa0793240 | 0.801089 | 1.061243e-48 | -8.615850e-47 |
| Msa0433530 | Msa0793380 | 0.811206 | 7.859693e-51 | -8.615850e-47 |
| Msa0433530 | Msa0794320 | 0.826734 | 2.305856e-54 | -8.615850e-47 |
| Msa0433530 | Msa0795080 | 0.803252 | 3.809232e-49 | -8.615850e-47 |
| Msa0433530 | Msa0799060 | 0.803792 | 2.944263e-49 | -8.615850e-47 |
| Msa0433530 | Msa0801740 | 0.807006 | 6.240714e-50 | -8.615850e-47 |
| Msa0433530 | Msa0805920 | 0.832896 | 7.276579e-56 | -8.615850e-47 |
| Msa0433530 | Msa0831590 | 0.803154 | 3.990642e-49 | -8.615850e-47 |
| Msa0433530 | Msa0835730 | 0.801376 | 9.270779e-49 | -8.615850e-47 |
| Msa0433530 | Msa0848900 | 0.813996 | 1.929048e-51 | -8.615850e-47 |
| Msa0433530 | Msa0860570 | 0.807278 | 5.464443e-50 | -8.615850e-47 |
| Msa0433530 | Msa0869120 | 0.826678 | 2.377954e-54 | -8.615850e-47 |
| Msa0433530 | Msa0871990 | 0.810081 | 1.375966e-50 | -8.615850e-47 |
| Msa0433530 | Msa0872440 | 0.807069 | 6.050400e-50 | -8.615850e-47 |
| Msa0433530 | Msa0876360 | 0.814006 | 1.918686e-51 | -8.615850e-47 |
| Msa0433530 | Msa0882510 | 0.819798 | 9.610447e-53 | -8.615850e-47 |
| Msa0433530 | Msa0905380 | 0.819646 | 1.041305e-52 | -8.615850e-47 |
| Msa0433530 | Msa0935850 | 0.815049 | 1.128199e-51 | -8.615850e-47 |
| Msa0433530 | Msa0937330 | 0.811688 | 6.177124e-51 | -8.615850e-47 |
| Msa0433530 | Msa0944550 | 0.824608 | 7.360939e-54 | -8.615850e-47 |
| Msa0433530 | Msa0945100 | 0.809300 | 2.025443e-50 | -8.615850e-47 |
| Msa0433530 | Msa0945120 | 0.809590 | 1.755307e-50 | -8.615850e-47 |
| Msa0433530 | Msa0947760 | 0.812351 | 4.428430e-51 | -8.615850e-47 |
| Msa0433530 | Msa0960160 | 0.834068 | 3.711750e-56 | -8.615850e-47 |
| Msa0433530 | Msa0974630 | 0.806907 | 6.547756e-50 | -8.615850e-47 |
| Msa0433530 | Msa0976250 | 0.807297 | 5.413632e-50 | -8.615850e-47 |
| Msa0433530 | Msa0978700 | 0.807750 | 4.338542e-50 | -8.615850e-47 |
| Msa0433530 | Msa0982270 | 0.868005 | 9.004941e-66 | -8.615850e-47 |
| Msa0433530 | Msa0994370 | 0.803396 | 3.556705e-49 | -8.615850e-47 |
| Msa0433530 | Msa1005410 | 0.819502 | 1.122903e-52 | -8.615850e-47 |
| Msa0433530 | Msa1021510 | 0.809015 | 2.331838e-50 | -8.615850e-47 |
| Msa0433530 | Msa1023180 | 0.845001 | 5.330600e-59 | -8.615850e-47 |
| Msa0433530 | Msa1026760 | 0.805172 | 1.517568e-49 | -8.615850e-47 |
| Msa0433530 | Msa1026790 | 0.802374 | 5.784194e-49 | -8.615850e-47 |
| Msa0433530 | Msa1039880 | 0.824043 | 9.997265e-54 | -8.615850e-47 |
| Msa0433530 | Msa1043050 | 0.841654 | 4.169247e-58 | -8.615850e-47 |
| Msa0433530 | Msa1047720 | 0.809462 | 1.870265e-50 | -8.615850e-47 |
| Msa0433530 | Msa1077070 | 0.800928 | 1.145054e-48 | -8.615850e-47 |
| Msa0433530 | Msa1085920 | 0.819074 | 1.405688e-52 | -8.615850e-47 |
| Msa0433530 | Msa1087990 | 0.802813 | 4.694506e-49 | -8.615850e-47 |
| Msa0433530 | Msa1090260 | 0.815970 | 7.035042e-52 | -8.615850e-47 |
| Msa0433530 | Msa1092090 | 0.824003 | 1.021162e-53 | -8.615850e-47 |
| Msa0433530 | Msa1094280 | 0.805439 | 1.334439e-49 | -8.615850e-47 |
| Msa0433530 | Msa1109820 | 0.812346 | 4.440398e-51 | -8.615850e-47 |
| Msa0433530 | Msa1115280 | 0.815495 | 8.976246e-52 | -8.615850e-47 |
| Msa0433530 | Msa1116690 | 0.814793 | 1.285552e-51 | -8.615850e-47 |
| Msa0433530 | Msa1150710 | 0.844836 | 5.906034e-59 | -8.615850e-47 |
| Msa0433530 | Msa1166390 | 0.802639 | 5.098752e-49 | -8.615850e-47 |
| Msa0433530 | Msa1171800 | 0.802144 | 6.448013e-49 | -8.615850e-47 |
| Msa0433530 | Msa1172230 | 0.800907 | 1.156507e-48 | -8.615850e-47 |
| Msa0433530 | Msa1174310 | 0.856374 | 3.359240e-62 | -8.615850e-47 |
| Msa0433530 | Msa1177780 | 0.805312 | 1.418641e-49 | -8.615850e-47 |
| Msa0433530 | Msa1206100 | 0.804226 | 2.391111e-49 | -8.615850e-47 |
| Msa0433530 | Msa1208380 | 0.812716 | 3.685306e-51 | -8.615850e-47 |
| Msa0433530 | Msa1217430 | -0.816880 | 4.402026e-52 | -8.615850e-47 |
| Msa0433530 | Msa1230830 | 0.800329 | 1.516448e-48 | -8.615850e-47 |
| Msa0433530 | Msa1233500 | 0.832191 | 1.088085e-55 | -8.615850e-47 |
| Msa0433530 | Msa1235400 | 0.848786 | 4.909434e-60 | -8.615850e-47 |
| Msa0433530 | Msa1258380 | -0.816789 | 4.613177e-52 | -8.615850e-47 |
| Msa0433530 | Msa1267260 | 0.814646 | 1.385898e-51 | -8.615850e-47 |
| Msa0433530 | Msa1270660 | 0.818364 | 2.037402e-52 | -8.615850e-47 |
| Msa0433530 | Msa1270730 | 0.825805 | 3.837023e-54 | -8.615850e-47 |
| Msa0433530 | Msa1276440 | 0.845378 | 4.215549e-59 | -8.615850e-47 |
| Msa0433530 | Msa1276510 | 0.810394 | 1.178260e-50 | -8.615850e-47 |
| Msa0433530 | Msa1287680 | 0.821433 | 4.048001e-53 | -8.615850e-47 |
| Msa0433530 | Msa1295330 | 0.808187 | 3.502815e-50 | -8.615850e-47 |
| Msa0433530 | Msa1300350 | -0.824617 | 7.325829e-54 | -8.615850e-47 |
| Msa0433530 | Msa1302190 | -0.811210 | 7.846160e-51 | -8.615850e-47 |
| Msa0433530 | Msa1303160 | 0.803283 | 3.753826e-49 | -8.615850e-47 |
| Msa0433530 | Msa1306750 | 0.852533 | 4.338139e-61 | -8.615850e-47 |
| Msa0433530 | Msa1307740 | 0.880834 | 3.960681e-70 | -8.615850e-47 |
| Msa0433530 | Msa1314770 | 0.864232 | 1.410193e-64 | -8.615850e-47 |
| Msa0433530 | Msa1329550 | 0.807001 | 6.256049e-50 | -8.615850e-47 |
| Msa0433530 | Msa1333420 | 0.814696 | 1.350915e-51 | -8.615850e-47 |
| Msa0433530 | Msa1335230 | 0.805992 | 1.020992e-49 | -8.615850e-47 |
| Msa0433530 | Msa1335710 | 0.800123 | 1.670528e-48 | -8.615850e-47 |
| Msa0433530 | Msa1339190 | 0.801947 | 7.078600e-49 | -8.615850e-47 |
| Msa0433530 | Msa1344660 | 0.813413 | 2.592538e-51 | -8.615850e-47 |
| Msa0433530 | Msa1348600 | 0.959815 | 7.375631e-118 | -8.615850e-47 |
| Msa0433530 | Msa1348850 | 0.835784 | 1.371281e-56 | -8.615850e-47 |
| Msa0433530 | Msa1377080 | 0.813665 | 2.282043e-51 | -8.615850e-47 |
| Msa0433530 | Msa1396940 | 0.808904 | 2.462074e-50 | -8.615850e-47 |
| Msa0433530 | Msa1397120 | 0.808585 | 2.881085e-50 | -8.615850e-47 |
| Msa0433530 | Msa1404550 | 0.809359 | 1.967947e-50 | -8.615850e-47 |
| Msa0433530 | Msa1407600 | 0.802916 | 4.469491e-49 | -8.615850e-47 |
| Msa0433530 | Msa1420270 | 0.800231 | 1.588407e-48 | -8.615850e-47 |
| Msa0433530 | Msa1438700 | 0.810586 | 1.070914e-50 | -8.615850e-47 |
| Msa0433530 | Msa1438840 | 0.809843 | 1.548259e-50 | -8.615850e-47 |
| Msa0433530 | Msa1443610 | 0.805340 | 1.399266e-49 | -8.615850e-47 |
| Msa0433530 | Msa1444250 | -0.826354 | 2.841263e-54 | -8.615850e-47 |
| Msa0433530 | Msa1444740 | 0.824291 | 8.741956e-54 | -8.615850e-47 |
| Msa0433530 | Msa1448630 | 0.848431 | 6.157863e-60 | -8.615850e-47 |
| Msa0433530 | Msa1451620 | -0.802414 | 5.674668e-49 | -8.615850e-47 |
| Msa0433530 | Msa1462060 | 0.812729 | 3.661613e-51 | -8.615850e-47 |
| Msa0433530 | Msa1466730 | 0.805552 | 1.263087e-49 | -8.615850e-47 |
| Msa0256330 | Msa0433530 | 0.817881 | 2.619824e-52 | -8.615850e-47 |
| Msa0257500 | Msa0433530 | 0.801337 | 9.443033e-49 | -8.615850e-47 |
| Msa0269450 | Msa0433530 | 0.811129 | 8.168376e-51 | -8.615850e-47 |
| Msa0271580 | Msa0433530 | 0.811869 | 5.642264e-51 | -8.615850e-47 |
| Msa0271650 | Msa0433530 | 0.806420 | 8.298181e-50 | -8.615850e-47 |
| Msa0284820 | Msa0433530 | 0.800598 | 1.337121e-48 | -8.615850e-47 |
| Msa0295330 | Msa0433530 | 0.810413 | 1.167172e-50 | -8.615850e-47 |
| Msa0299580 | Msa0433530 | 0.830554 | 2.751417e-55 | -8.615850e-47 |
| Msa0304840 | Msa0433530 | 0.806073 | 9.820919e-50 | -8.615850e-47 |
| Msa0305890 | Msa0433530 | 0.805817 | 1.111506e-49 | -8.615850e-47 |
| Msa0307470 | Msa0433530 | 0.837244 | 5.829391e-57 | -8.615850e-47 |
| Msa0319130 | Msa0433530 | 0.803289 | 3.742394e-49 | -8.615850e-47 |
| Msa0319170 | Msa0433530 | 0.816467 | 5.448681e-52 | -8.615850e-47 |
| Msa0326110 | Msa0433530 | 0.812721 | 3.675962e-51 | -8.615850e-47 |
| Msa0337060 | Msa0433530 | 0.829452 | 5.108324e-55 | -8.615850e-47 |
| Msa0340810 | Msa0433530 | 0.804628 | 1.971792e-49 | -8.615850e-47 |
| Msa0341230 | Msa0433530 | 0.800903 | 1.158701e-48 | -8.615850e-47 |
| Msa0347610 | Msa0433530 | 0.852387 | 4.774583e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0433530 | MtrunA17_Chr3g0139141 | 97.455 | 393 | 9 | 1 | 1 | 393 | 1 | 392 | 0.0 | 791 |
| Msa0433530 | MtrunA17_Chr8g0365761 | 39.726 | 365 | 219 | 1 | 20 | 383 | 175 | 539 | 3.10e-99 | 306 |
| Msa0433530 | MtrunA17_Chr8g0365761 | 36.778 | 329 | 203 | 5 | 14 | 339 | 9 | 335 | 6.71e-67 | 222 |
| Msa0433530 | MtrunA17_Chr3g0143311 | 37.186 | 398 | 231 | 6 | 12 | 390 | 32 | 429 | 2.46e-83 | 261 |
| Msa0433530 | MtrunA17_Chr8g0365791 | 37.821 | 312 | 193 | 1 | 27 | 337 | 182 | 493 | 2.61e-76 | 244 |
| Msa0433530 | MtrunA17_Chr8g0365791 | 33.245 | 376 | 239 | 7 | 14 | 385 | 9 | 376 | 7.37e-66 | 218 |
| Msa0433530 | MtrunA17_Chr8g0365791 | 37.179 | 156 | 96 | 2 | 20 | 173 | 335 | 490 | 2.69e-29 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0433530 | AT4G31240.1 | 60.106 | 376 | 150 | 0 | 11 | 386 | 11 | 386 | 1.81e-173 | 489 |
| Msa0433530 | AT4G31240.2 | 60.106 | 376 | 150 | 0 | 11 | 386 | 11 | 386 | 1.81e-173 | 489 |
| Msa0433530 | AT1G60420.1 | 37.705 | 366 | 225 | 3 | 20 | 383 | 179 | 543 | 1.35e-94 | 295 |
| Msa0433530 | AT1G60420.1 | 37.255 | 357 | 214 | 6 | 13 | 363 | 12 | 364 | 6.78e-69 | 228 |
Find 96 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGACATTGAATTCTTTA+AGG | 0.137026 | 3_2:+86001496 | None:intergenic |
| GGACGCAACTTTCTCATTTC+AGG | 0.197560 | 3_2:-86001895 | Msa0433530:CDS |
| CTTATCCTCGATTCAGTAAA+TGG | 0.202499 | 3_2:+86001303 | None:intergenic |
| TTTGTAATTGTATACTTATT+TGG | 0.216763 | 3_2:-86000817 | Msa0433530:three_prime_UTR |
| GCATGAACATGTACTTAAAT+TGG | 0.232241 | 3_2:-86001217 | Msa0433530:CDS |
| TTTATGATGATCACGTAATA+TGG | 0.267560 | 3_2:+86002987 | None:intergenic |
| TGCCTTGTTCTGTCTTCATA+TGG | 0.269042 | 3_2:+86001447 | None:intergenic |
| AAAACGCGAAGAAGTAAATT+TGG | 0.274011 | 3_2:-86001938 | Msa0433530:CDS |
| CCTTCCCTTCACAAGATAAA+AGG | 0.288638 | 3_2:+86002582 | None:intergenic |
| AAGCCTCTCCTTCCTTTCTC+AGG | 0.320765 | 3_2:+86001265 | None:intergenic |
| TATCATTTAATGAAAAGTTT+AGG | 0.327025 | 3_2:-86000884 | Msa0433530:three_prime_UTR |
| GAAGACTGATTGATAGATAT+CGG | 0.330938 | 3_2:-86002107 | Msa0433530:CDS |
| ATTGAGTGGATTGAGGATTA+TGG | 0.350211 | 3_2:-86002021 | Msa0433530:CDS |
| GTAAGAAACAAGGCAAGTTC+TGG | 0.355815 | 3_2:-86001164 | Msa0433530:CDS |
| ACATGTACTTAAATTGGATA+TGG | 0.376466 | 3_2:-86001211 | Msa0433530:CDS |
| TCCCTTCCTTTAGAAGTGTA+TGG | 0.376495 | 3_2:-86000857 | Msa0433530:three_prime_UTR |
| GGAAAAGTCATTAGTTTGAA+TGG | 0.389791 | 3_2:-86001363 | Msa0433530:CDS |
| AGGAGAGGCTTTGCCTCAAC+AGG | 0.399694 | 3_2:-86001253 | Msa0433530:CDS |
| AAACTTACCCTTCAAATAGT+AGG | 0.402552 | 3_2:+86000941 | None:intergenic |
| CTTATATTCATGAGCTACTT+TGG | 0.411333 | 3_2:-86001035 | Msa0433530:three_prime_UTR |
| GTTAAGGCATCAGAACATAA+TGG | 0.434095 | 3_2:+86002060 | None:intergenic |
| GGCTTTAACAACTTAATGAT+AGG | 0.435311 | 3_2:+86000962 | None:intergenic |
| AACTAGCCGGGAAAACTGTT+GGG | 0.444358 | 3_2:-86001647 | Msa0433530:CDS |
| ATGAGCTACTTTGGTAGTGA+TGG | 0.446519 | 3_2:-86001026 | Msa0433530:three_prime_UTR |
| GCCTTGTTCTGTCTTCATAT+GGG | 0.446620 | 3_2:+86001448 | None:intergenic |
| TGTTAAAGCCTACTATTTGA+AGG | 0.450574 | 3_2:-86000949 | Msa0433530:three_prime_UTR |
| TGAGCTACTTTGGTAGTGAT+GGG | 0.455339 | 3_2:-86001025 | Msa0433530:three_prime_UTR |
| AGAATCACATACATATGCTT+TGG | 0.462446 | 3_2:+86001188 | None:intergenic |
| TATATCCCATACACTTCTAA+AGG | 0.474795 | 3_2:+86000851 | None:intergenic |
| GGCTTTGCCTCAACAGGTTG+AGG | 0.481541 | 3_2:-86001247 | Msa0433530:CDS |
| GAACTAGCCGGGAAAACTGT+TGG | 0.484272 | 3_2:-86001648 | Msa0433530:CDS |
| TACCCTTGTCTGATTGCAAT+GGG | 0.484415 | 3_2:-86002338 | Msa0433530:CDS |
| GAACATAATGGAATGAATGA+TGG | 0.484930 | 3_2:+86002072 | None:intergenic |
| CCTTTGACCATGACGAGGAT+GGG | 0.489378 | 3_2:-86002191 | Msa0433530:CDS |
| TTTAGAAGCGGCCCTGAGAA+AGG | 0.496110 | 3_2:-86001277 | Msa0433530:CDS |
| TCATGTCTCTTCCTTGTGAA+AGG | 0.497231 | 3_2:+86001985 | None:intergenic |
| AAAAGCTTCTGCTCCGTATG+AGG | 0.498346 | 3_2:+86001326 | None:intergenic |
| CCCTTCCTTTAGAAGTGTAT+GGG | 0.501598 | 3_2:-86000856 | Msa0433530:three_prime_UTR |
| AAACATGATTGAGTGGATTG+AGG | 0.505573 | 3_2:-86002028 | Msa0433530:CDS |
| TCCTTTGACCATGACGAGGA+TGG | 0.507388 | 3_2:-86002192 | Msa0433530:CDS |
| TTGACCTTCTCAAGACAACT+AGG | 0.509346 | 3_2:+86001105 | None:intergenic |
| GGTCCAATGAAAACCAAAGC+TGG | 0.509568 | 3_2:+86001390 | None:intergenic |
| AGCCTCTCCTTCCTTTCTCA+GGG | 0.514000 | 3_2:+86001266 | None:intergenic |
| TTATGATGATCACGTAATAT+GGG | 0.521041 | 3_2:+86002988 | None:intergenic |
| AACAATCTGAAGGATACAAA+AGG | 0.521437 | 3_2:-86001558 | Msa0433530:CDS |
| AACATAATGGAATGAATGAT+GGG | 0.522116 | 3_2:+86002073 | None:intergenic |
| GTTAAAGCCTACTATTTGAA+GGG | 0.527887 | 3_2:-86000948 | Msa0433530:three_prime_UTR |
| CATTTCAGGAGATGATAGAA+AGG | 0.533685 | 3_2:-86001881 | Msa0433530:intron |
| TCTTTATTCACATGTCACAT+AGG | 0.533693 | 3_2:-86002954 | Msa0433530:intron |
| AAGTAGCTCATGAATATAAG+TGG | 0.533999 | 3_2:+86001038 | None:intergenic |
| AAGACTGATTGATAGATATC+GGG | 0.537244 | 3_2:-86002106 | Msa0433530:CDS |
| GTGCTTGTATCTGAACTAGC+CGG | 0.540763 | 3_2:-86001660 | Msa0433530:CDS |
| CTGATGCATTTCCTTTCACA+AGG | 0.543510 | 3_2:-86001996 | Msa0433530:CDS |
| TCCCATACACTTCTAAAGGA+AGG | 0.544175 | 3_2:+86000855 | None:intergenic |
| TGACAGCTTTGATGTTCTGA+AGG | 0.544346 | 3_2:-86002630 | Msa0433530:CDS |
| ATTCTATTCTCTACCAACAT+TGG | 0.544674 | 3_2:+86001076 | None:intergenic |
| CCCATCCTCGTCATGGTCAA+AGG | 0.545313 | 3_2:+86002191 | None:intergenic |
| TCATCCTAGTTGTCTTGAGA+AGG | 0.553361 | 3_2:-86001109 | Msa0433530:CDS |
| TGCTTGTATCTGAACTAGCC+GGG | 0.560596 | 3_2:-86001659 | Msa0433530:CDS |
| CTTTAAACCCATCCTCGTCA+TGG | 0.563938 | 3_2:+86002184 | None:intergenic |
| GCAGAATCATCTTCTTACAC+AGG | 0.565045 | 3_2:-86003019 | Msa0433530:five_prime_UTR |
| TCAACAGAACTAGCATGCCT+TGG | 0.565333 | 3_2:-86001479 | Msa0433530:CDS |
| CCCATACACTTCTAAAGGAA+GGG | 0.567275 | 3_2:+86000856 | None:intergenic |
| TTTCTGAGGCTCTTATGGCA+GGG | 0.573123 | 3_2:-86002679 | Msa0433530:exon |
| TTTCCCATTGCAATCAGACA+AGG | 0.573755 | 3_2:+86002335 | None:intergenic |
| GTACCCTTGTCTGATTGCAA+TGG | 0.575133 | 3_2:-86002339 | Msa0433530:CDS |
| CAGTTCATGATCTCCTCATA+CGG | 0.577540 | 3_2:-86001339 | Msa0433530:CDS |
| GAAGCGGCCCTGAGAAAGGA+AGG | 0.578716 | 3_2:-86001273 | Msa0433530:CDS |
| TATGAAACACTGAGAAAGAG+AGG | 0.589929 | 3_2:-86002240 | Msa0433530:CDS |
| AGGTCAACAATGACCAATGT+TGG | 0.598627 | 3_2:-86001089 | Msa0433530:CDS |
| TTGATATCCTCAACCTGTTG+AGG | 0.598633 | 3_2:+86001240 | None:intergenic |
| GTATGCATCTGCAAGTTGAA+TGG | 0.602371 | 3_2:+86001581 | None:intergenic |
| TCATAAAGATCAACAAGATG+AGG | 0.609670 | 3_2:+86002258 | None:intergenic |
| CATCTCCTTTGACCATGACG+AGG | 0.615057 | 3_2:-86002196 | Msa0433530:CDS |
| ATGACAAGGAGGAGACCAGT+AGG | 0.615127 | 3_2:+86001611 | None:intergenic |
| TCCCATATGAAGACAGAACA+AGG | 0.616146 | 3_2:-86001449 | Msa0433530:CDS |
| TTGGATGAATTATTGACACA+TGG | 0.617894 | 3_2:-86001919 | Msa0433530:CDS |
| TGAGGAATGAAAAGTCTGCA+AGG | 0.618484 | 3_2:+86002276 | None:intergenic |
| ATCTGCAAGTTGAATGGTGA+AGG | 0.619741 | 3_2:+86001587 | None:intergenic |
| ATGAAACACTGAGAAAGAGA+GGG | 0.621375 | 3_2:-86002239 | Msa0433530:CDS |
| GGCCCTGAGAAAGGAAGGAG+AGG | 0.626905 | 3_2:-86001268 | Msa0433530:CDS |
| TCTGCAAGGTCTACACCAGT+TGG | 0.627906 | 3_2:+86002290 | None:intergenic |
| CTAAAACAATCTCAAAGCAG+TGG | 0.631342 | 3_2:+86001535 | None:intergenic |
| TGAATGGTGAAGGCATGACA+AGG | 0.638241 | 3_2:+86001597 | None:intergenic |
| GATGAATTATTGACACATGG+AGG | 0.644306 | 3_2:-86001916 | Msa0433530:CDS |
| TTCCCATTGCAATCAGACAA+GGG | 0.647330 | 3_2:+86002336 | None:intergenic |
| TGTGATTCTTGTAAGAAACA+AGG | 0.649097 | 3_2:-86001174 | Msa0433530:CDS |
| AGATGCATACAACAATCTGA+AGG | 0.652915 | 3_2:-86001568 | Msa0433530:CDS |
| TGATGATCACGTAATATGGG+AGG | 0.656993 | 3_2:+86002991 | None:intergenic |
| TTTCACAAGGAAGAGACATG+AGG | 0.657371 | 3_2:-86001983 | Msa0433530:CDS |
| TCATATGGGATAGCAAGCCA+AGG | 0.668435 | 3_2:+86001462 | None:intergenic |
| TCAAATGGGACAGCTAGCCA+CGG | 0.675819 | 3_2:+86002144 | None:intergenic |
| TTATATCAAAGATTCTACAG+AGG | 0.694670 | 3_2:+86001421 | None:intergenic |
| AACACATCAAGAGTATGCCG+TGG | 0.699138 | 3_2:-86002161 | Msa0433530:CDS |
| ATGGTGAAGGCATGACAAGG+AGG | 0.703664 | 3_2:+86001600 | None:intergenic |
| GAGGATAAGAGATTTAGAAG+CGG | 0.713748 | 3_2:-86001289 | Msa0433530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCATTTAATGAAAAGTTT+AGG | - | chr3_2:86002931-86002950 | Msa0433530:intron | 15.0% |
| !! | TTTGTAATTGTATACTTATT+TGG | - | chr3_2:86002998-86003017 | Msa0433530:five_prime_UTR | 15.0% |
| !! | TATCATTTAATGAAAAGTTT+AGG | - | chr3_2:86002931-86002950 | Msa0433530:intron | 15.0% |
| !! | TTTGTAATTGTATACTTATT+TGG | - | chr3_2:86002998-86003017 | Msa0433530:five_prime_UTR | 15.0% |
| !!! | TTTTGAAACCTAAATAATCA+AGG | + | chr3_2:86001088-86001107 | None:intergenic | 20.0% |
| !!! | TATTCAATTTTGCATCAAAT+GGG | + | chr3_2:86001688-86001707 | None:intergenic | 20.0% |
| !! | TATAAAAAAAATTCCAGCTT+TGG | - | chr3_2:86002412-86002431 | Msa0433530:intron | 20.0% |
| !!! | TTTTGAAACCTAAATAATCA+AGG | + | chr3_2:86001088-86001107 | None:intergenic | 20.0% |
| !!! | TATTCAATTTTGCATCAAAT+GGG | + | chr3_2:86001688-86001707 | None:intergenic | 20.0% |
| !! | TATAAAAAAAATTCCAGCTT+TGG | - | chr3_2:86002412-86002431 | Msa0433530:intron | 20.0% |
| ! | TTATGATGATCACGTAATAT+GGG | + | chr3_2:86000830-86000849 | None:intergenic | 25.0% |
| ! | TTTATGATGATCACGTAATA+TGG | + | chr3_2:86000831-86000850 | None:intergenic | 25.0% |
| ! | TTGCTTATCCTTGATTATTT+AGG | - | chr3_2:86001077-86001096 | Msa0433530:exon | 25.0% |
| !! | ATTTCCTTTTATCTTGTGAA+GGG | - | chr3_2:86001229-86001248 | Msa0433530:CDS | 25.0% |
| ! | TCACAAAACTAAGCAAATTA+TGG | + | chr3_2:86001408-86001427 | None:intergenic | 25.0% |
| !! | CTATTCAATTTTGCATCAAA+TGG | + | chr3_2:86001689-86001708 | None:intergenic | 25.0% |
| !! | AACATAATGGAATGAATGAT+GGG | + | chr3_2:86001745-86001764 | None:intergenic | 25.0% |
| ! | GTAAACAAAAACTTCAAGTA+GGG | + | chr3_2:86001970-86001989 | None:intergenic | 25.0% |
| ! | AGTAAACAAAAACTTCAAGT+AGG | + | chr3_2:86001971-86001990 | None:intergenic | 25.0% |
| !! | GTAATCACGATTTTAAATTG+TGG | - | chr3_2:86001999-86002018 | Msa0433530:CDS | 25.0% |
| !!! | TTGTTTTAGTTTCAACAGAT+AGG | - | chr3_2:86002294-86002313 | Msa0433530:CDS | 25.0% |
| !!! | TGTTTTAGTTTCAACAGATA+GGG | - | chr3_2:86002295-86002314 | Msa0433530:CDS | 25.0% |
| ! | TGTTGACATTGAATTCTTTA+AGG | + | chr3_2:86002322-86002341 | None:intergenic | 25.0% |
| ! | TTATATCAAAGATTCTACAG+AGG | + | chr3_2:86002397-86002416 | None:intergenic | 25.0% |
| ! | ACATGTACTTAAATTGGATA+TGG | - | chr3_2:86002604-86002623 | Msa0433530:CDS | 25.0% |
| ! | TTATGATGATCACGTAATAT+GGG | + | chr3_2:86000830-86000849 | None:intergenic | 25.0% |
| ! | TTTATGATGATCACGTAATA+TGG | + | chr3_2:86000831-86000850 | None:intergenic | 25.0% |
| ! | TTGCTTATCCTTGATTATTT+AGG | - | chr3_2:86001077-86001096 | Msa0433530:exon | 25.0% |
| !! | ATTTCCTTTTATCTTGTGAA+GGG | - | chr3_2:86001229-86001248 | Msa0433530:CDS | 25.0% |
| ! | TCACAAAACTAAGCAAATTA+TGG | + | chr3_2:86001408-86001427 | None:intergenic | 25.0% |
| !! | CTATTCAATTTTGCATCAAA+TGG | + | chr3_2:86001689-86001708 | None:intergenic | 25.0% |
| !! | AACATAATGGAATGAATGAT+GGG | + | chr3_2:86001745-86001764 | None:intergenic | 25.0% |
| ! | GTAAACAAAAACTTCAAGTA+GGG | + | chr3_2:86001970-86001989 | None:intergenic | 25.0% |
| ! | AGTAAACAAAAACTTCAAGT+AGG | + | chr3_2:86001971-86001990 | None:intergenic | 25.0% |
| !! | GTAATCACGATTTTAAATTG+TGG | - | chr3_2:86001999-86002018 | Msa0433530:CDS | 25.0% |
| !!! | TTGTTTTAGTTTCAACAGAT+AGG | - | chr3_2:86002294-86002313 | Msa0433530:CDS | 25.0% |
| !!! | TGTTTTAGTTTCAACAGATA+GGG | - | chr3_2:86002295-86002314 | Msa0433530:CDS | 25.0% |
| ! | TGTTGACATTGAATTCTTTA+AGG | + | chr3_2:86002322-86002341 | None:intergenic | 25.0% |
| ! | TTATATCAAAGATTCTACAG+AGG | + | chr3_2:86002397-86002416 | None:intergenic | 25.0% |
| ! | ACATGTACTTAAATTGGATA+TGG | - | chr3_2:86002604-86002623 | Msa0433530:CDS | 25.0% |
| TCTTTATTCACATGTCACAT+AGG | - | chr3_2:86000861-86000880 | Msa0433530:three_prime_UTR | 30.0% | |
| !! | AAAAGTATTCAACAAGTGTG+AGG | - | chr3_2:86000985-86001004 | Msa0433530:three_prime_UTR | 30.0% |
| !! | GGGTTATGTTTTTATCGATA+AGG | - | chr3_2:86001013-86001032 | Msa0433530:three_prime_UTR | 30.0% |
| ! | GATTTCCTTTTATCTTGTGA+AGG | - | chr3_2:86001228-86001247 | Msa0433530:CDS | 30.0% |
| !!! | TTTGCTTAGTTTTGTGATCT+TGG | - | chr3_2:86001411-86001430 | Msa0433530:CDS | 30.0% |
| CTAATCTCATGATTCAAAGA+TGG | + | chr3_2:86001456-86001475 | None:intergenic | 30.0% | |
| CATCTTTGAATCATGAGATT+AGG | - | chr3_2:86001454-86001473 | Msa0433530:CDS | 30.0% | |
| TCATAAAGATCAACAAGATG+AGG | + | chr3_2:86001560-86001579 | None:intergenic | 30.0% | |
| GAAGACTGATTGATAGATAT+CGG | - | chr3_2:86001708-86001727 | Msa0433530:intron | 30.0% | |
| AAGACTGATTGATAGATATC+GGG | - | chr3_2:86001709-86001728 | Msa0433530:intron | 30.0% | |
| ! | GAACATAATGGAATGAATGA+TGG | + | chr3_2:86001746-86001765 | None:intergenic | 30.0% |
| !! | CATGTTTTTGTCAACAGTTA+AGG | + | chr3_2:86001774-86001793 | None:intergenic | 30.0% |
| TTGACAAAAACATGATTGAG+TGG | - | chr3_2:86001780-86001799 | Msa0433530:intron | 30.0% | |
| ! | TTCGCGTTTTCTTTTATCTA+TGG | + | chr3_2:86001867-86001886 | None:intergenic | 30.0% |
| AAAACGCGAAGAAGTAAATT+TGG | - | chr3_2:86001877-86001896 | Msa0433530:intron | 30.0% | |
| TTGGATGAATTATTGACACA+TGG | - | chr3_2:86001896-86001915 | Msa0433530:CDS | 30.0% | |
| ! | ACGATTTTAAATTGTGGTTG+CGG | - | chr3_2:86002005-86002024 | Msa0433530:CDS | 30.0% |
| !!! | AAAACTGTTGGGCTATTTTT+CGG | - | chr3_2:86002179-86002198 | Msa0433530:CDS | 30.0% |
| AACAATCTGAAGGATACAAA+AGG | - | chr3_2:86002257-86002276 | Msa0433530:CDS | 30.0% | |
| ! | AAACTAATGACTTTTCCATC+TGG | + | chr3_2:86002449-86002468 | None:intergenic | 30.0% |
| ! | GGAAAAGTCATTAGTTTGAA+TGG | - | chr3_2:86002452-86002471 | Msa0433530:intron | 30.0% |
| GCATGAACATGTACTTAAAT+TGG | - | chr3_2:86002598-86002617 | Msa0433530:CDS | 30.0% | |
| AGAATCACATACATATGCTT+TGG | + | chr3_2:86002630-86002649 | None:intergenic | 30.0% | |
| TGTGATTCTTGTAAGAAACA+AGG | - | chr3_2:86002641-86002660 | Msa0433530:CDS | 30.0% | |
| ATTCTATTCTCTACCAACAT+TGG | + | chr3_2:86002742-86002761 | None:intergenic | 30.0% | |
| AAGTAGCTCATGAATATAAG+TGG | + | chr3_2:86002780-86002799 | None:intergenic | 30.0% | |
| CTTATATTCATGAGCTACTT+TGG | - | chr3_2:86002780-86002799 | Msa0433530:intron | 30.0% | |
| ! | GGCTTTAACAACTTAATGAT+AGG | + | chr3_2:86002856-86002875 | None:intergenic | 30.0% |
| TGTTAAAGCCTACTATTTGA+AGG | - | chr3_2:86002866-86002885 | Msa0433530:intron | 30.0% | |
| GTTAAAGCCTACTATTTGAA+GGG | - | chr3_2:86002867-86002886 | Msa0433530:intron | 30.0% | |
| AAACTTACCCTTCAAATAGT+AGG | + | chr3_2:86002877-86002896 | None:intergenic | 30.0% | |
| ! | TTGAAGGGTAAGTTTTTGTA+AGG | - | chr3_2:86002882-86002901 | Msa0433530:intron | 30.0% |
| ! | TGAAGGGTAAGTTTTTGTAA+GGG | - | chr3_2:86002883-86002902 | Msa0433530:intron | 30.0% |
| TATATCCCATACACTTCTAA+AGG | + | chr3_2:86002967-86002986 | None:intergenic | 30.0% | |
| TCTTTATTCACATGTCACAT+AGG | - | chr3_2:86000861-86000880 | Msa0433530:three_prime_UTR | 30.0% | |
| !! | AAAAGTATTCAACAAGTGTG+AGG | - | chr3_2:86000985-86001004 | Msa0433530:three_prime_UTR | 30.0% |
| !! | GGGTTATGTTTTTATCGATA+AGG | - | chr3_2:86001013-86001032 | Msa0433530:three_prime_UTR | 30.0% |
| ! | GATTTCCTTTTATCTTGTGA+AGG | - | chr3_2:86001228-86001247 | Msa0433530:CDS | 30.0% |
| !!! | TTTGCTTAGTTTTGTGATCT+TGG | - | chr3_2:86001411-86001430 | Msa0433530:CDS | 30.0% |
| CTAATCTCATGATTCAAAGA+TGG | + | chr3_2:86001456-86001475 | None:intergenic | 30.0% | |
| CATCTTTGAATCATGAGATT+AGG | - | chr3_2:86001454-86001473 | Msa0433530:CDS | 30.0% | |
| TCATAAAGATCAACAAGATG+AGG | + | chr3_2:86001560-86001579 | None:intergenic | 30.0% | |
| GAAGACTGATTGATAGATAT+CGG | - | chr3_2:86001708-86001727 | Msa0433530:intron | 30.0% | |
| AAGACTGATTGATAGATATC+GGG | - | chr3_2:86001709-86001728 | Msa0433530:intron | 30.0% | |
| ! | GAACATAATGGAATGAATGA+TGG | + | chr3_2:86001746-86001765 | None:intergenic | 30.0% |
| !! | CATGTTTTTGTCAACAGTTA+AGG | + | chr3_2:86001774-86001793 | None:intergenic | 30.0% |
| TTGACAAAAACATGATTGAG+TGG | - | chr3_2:86001780-86001799 | Msa0433530:intron | 30.0% | |
| ! | TTCGCGTTTTCTTTTATCTA+TGG | + | chr3_2:86001867-86001886 | None:intergenic | 30.0% |
| AAAACGCGAAGAAGTAAATT+TGG | - | chr3_2:86001877-86001896 | Msa0433530:intron | 30.0% | |
| TTGGATGAATTATTGACACA+TGG | - | chr3_2:86001896-86001915 | Msa0433530:CDS | 30.0% | |
| ! | ACGATTTTAAATTGTGGTTG+CGG | - | chr3_2:86002005-86002024 | Msa0433530:CDS | 30.0% |
| !!! | AAAACTGTTGGGCTATTTTT+CGG | - | chr3_2:86002179-86002198 | Msa0433530:CDS | 30.0% |
| AACAATCTGAAGGATACAAA+AGG | - | chr3_2:86002257-86002276 | Msa0433530:CDS | 30.0% | |
| ! | AAACTAATGACTTTTCCATC+TGG | + | chr3_2:86002449-86002468 | None:intergenic | 30.0% |
| ! | GGAAAAGTCATTAGTTTGAA+TGG | - | chr3_2:86002452-86002471 | Msa0433530:intron | 30.0% |
| GCATGAACATGTACTTAAAT+TGG | - | chr3_2:86002598-86002617 | Msa0433530:CDS | 30.0% | |
| AGAATCACATACATATGCTT+TGG | + | chr3_2:86002630-86002649 | None:intergenic | 30.0% | |
| TGTGATTCTTGTAAGAAACA+AGG | - | chr3_2:86002641-86002660 | Msa0433530:CDS | 30.0% | |
| ATTCTATTCTCTACCAACAT+TGG | + | chr3_2:86002742-86002761 | None:intergenic | 30.0% | |
| AAGTAGCTCATGAATATAAG+TGG | + | chr3_2:86002780-86002799 | None:intergenic | 30.0% | |
| CTTATATTCATGAGCTACTT+TGG | - | chr3_2:86002780-86002799 | Msa0433530:intron | 30.0% | |
| ! | GGCTTTAACAACTTAATGAT+AGG | + | chr3_2:86002856-86002875 | None:intergenic | 30.0% |
| TGTTAAAGCCTACTATTTGA+AGG | - | chr3_2:86002866-86002885 | Msa0433530:intron | 30.0% | |
| GTTAAAGCCTACTATTTGAA+GGG | - | chr3_2:86002867-86002886 | Msa0433530:intron | 30.0% | |
| AAACTTACCCTTCAAATAGT+AGG | + | chr3_2:86002877-86002896 | None:intergenic | 30.0% | |
| ! | TTGAAGGGTAAGTTTTTGTA+AGG | - | chr3_2:86002882-86002901 | Msa0433530:intron | 30.0% |
| ! | TGAAGGGTAAGTTTTTGTAA+GGG | - | chr3_2:86002883-86002902 | Msa0433530:intron | 30.0% |
| TATATCCCATACACTTCTAA+AGG | + | chr3_2:86002967-86002986 | None:intergenic | 30.0% | |
| AATTAAGACACAATCCTGCA+AGG | + | chr3_2:86000892-86000911 | None:intergenic | 35.0% | |
| AGCAATTCAGATTCTTGCAA+GGG | + | chr3_2:86000938-86000957 | None:intergenic | 35.0% | |
| AAGCAATTCAGATTCTTGCA+AGG | + | chr3_2:86000939-86000958 | None:intergenic | 35.0% | |
| !! | TCTGAATTGCTTTTGTCTCT+AGG | - | chr3_2:86000947-86000966 | Msa0433530:three_prime_UTR | 35.0% |
| TATGAAACACTGAGAAAGAG+AGG | - | chr3_2:86001575-86001594 | Msa0433530:CDS | 35.0% | |
| ATGAAACACTGAGAAAGAGA+GGG | - | chr3_2:86001576-86001595 | Msa0433530:CDS | 35.0% | |
| ! | GTTAAGGCATCAGAACATAA+TGG | + | chr3_2:86001758-86001777 | None:intergenic | 35.0% |
| !! | AAACATGATTGAGTGGATTG+AGG | - | chr3_2:86001787-86001806 | Msa0433530:intron | 35.0% |
| !! | ATTGAGTGGATTGAGGATTA+TGG | - | chr3_2:86001794-86001813 | Msa0433530:intron | 35.0% |
| GATGAATTATTGACACATGG+AGG | - | chr3_2:86001899-86001918 | Msa0433530:CDS | 35.0% | |
| CATTTCAGGAGATGATAGAA+AGG | - | chr3_2:86001934-86001953 | Msa0433530:CDS | 35.0% | |
| GAATTCCATAAATGCACTCT+AGG | + | chr3_2:86002091-86002110 | None:intergenic | 35.0% | |
| AGATGCATACAACAATCTGA+AGG | - | chr3_2:86002247-86002266 | Msa0433530:CDS | 35.0% | |
| CTAAAACAATCTCAAAGCAG+TGG | + | chr3_2:86002283-86002302 | None:intergenic | 35.0% | |
| !!! | ATTCCAGCTTTGGTTTTCAT+TGG | - | chr3_2:86002422-86002441 | Msa0433530:intron | 35.0% |
| ! | CTTTTCCATTTACTGAATCG+AGG | - | chr3_2:86002507-86002526 | Msa0433530:intron | 35.0% |
| CTTATCCTCGATTCAGTAAA+TGG | + | chr3_2:86002515-86002534 | None:intergenic | 35.0% | |
| GAGGATAAGAGATTTAGAAG+CGG | - | chr3_2:86002526-86002545 | Msa0433530:intron | 35.0% | |
| AATTAAGACACAATCCTGCA+AGG | + | chr3_2:86000892-86000911 | None:intergenic | 35.0% | |
| AGCAATTCAGATTCTTGCAA+GGG | + | chr3_2:86000938-86000957 | None:intergenic | 35.0% | |
| AAGCAATTCAGATTCTTGCA+AGG | + | chr3_2:86000939-86000958 | None:intergenic | 35.0% | |
| !! | TCTGAATTGCTTTTGTCTCT+AGG | - | chr3_2:86000947-86000966 | Msa0433530:three_prime_UTR | 35.0% |
| TATGAAACACTGAGAAAGAG+AGG | - | chr3_2:86001575-86001594 | Msa0433530:CDS | 35.0% | |
| ATGAAACACTGAGAAAGAGA+GGG | - | chr3_2:86001576-86001595 | Msa0433530:CDS | 35.0% | |
| ! | GTTAAGGCATCAGAACATAA+TGG | + | chr3_2:86001758-86001777 | None:intergenic | 35.0% |
| !! | AAACATGATTGAGTGGATTG+AGG | - | chr3_2:86001787-86001806 | Msa0433530:intron | 35.0% |
| !! | ATTGAGTGGATTGAGGATTA+TGG | - | chr3_2:86001794-86001813 | Msa0433530:intron | 35.0% |
| GATGAATTATTGACACATGG+AGG | - | chr3_2:86001899-86001918 | Msa0433530:CDS | 35.0% | |
| CATTTCAGGAGATGATAGAA+AGG | - | chr3_2:86001934-86001953 | Msa0433530:CDS | 35.0% | |
| GAATTCCATAAATGCACTCT+AGG | + | chr3_2:86002091-86002110 | None:intergenic | 35.0% | |
| AGATGCATACAACAATCTGA+AGG | - | chr3_2:86002247-86002266 | Msa0433530:CDS | 35.0% | |
| CTAAAACAATCTCAAAGCAG+TGG | + | chr3_2:86002283-86002302 | None:intergenic | 35.0% | |
| !!! | ATTCCAGCTTTGGTTTTCAT+TGG | - | chr3_2:86002422-86002441 | Msa0433530:intron | 35.0% |
| ! | CTTTTCCATTTACTGAATCG+AGG | - | chr3_2:86002507-86002526 | Msa0433530:intron | 35.0% |
| CTTATCCTCGATTCAGTAAA+TGG | + | chr3_2:86002515-86002534 | None:intergenic | 35.0% | |
| GAGGATAAGAGATTTAGAAG+CGG | - | chr3_2:86002526-86002545 | Msa0433530:intron | 35.0% | |
| TGATGATCACGTAATATGGG+AGG | + | chr3_2:86000827-86000846 | None:intergenic | 40.0% | |
| ! | GTGAGTACATCTGTTTTCTG+AGG | - | chr3_2:86001122-86001141 | Msa0433530:CDS | 40.0% |
| !!! | TCTGTTTTCTGAGGCTCTTA+TGG | - | chr3_2:86001131-86001150 | Msa0433530:CDS | 40.0% |
| ! | TGACAGCTTTGATGTTCTGA+AGG | - | chr3_2:86001185-86001204 | Msa0433530:CDS | 40.0% |
| CCTTCCCTTCACAAGATAAA+AGG | + | chr3_2:86001236-86001255 | None:intergenic | 40.0% | |
| ! | CCTTTTATCTTGTGAAGGGA+AGG | - | chr3_2:86001233-86001252 | Msa0433530:CDS | 40.0% |
| !! | CAGATTTTAGTGTCGCAACA+GGG | + | chr3_2:86001368-86001387 | None:intergenic | 40.0% |
| TACCCTTGTCTGATTGCAAT+GGG | - | chr3_2:86001477-86001496 | Msa0433530:CDS | 40.0% | |
| TTCCCATTGCAATCAGACAA+GGG | + | chr3_2:86001482-86001501 | None:intergenic | 40.0% | |
| TTTCCCATTGCAATCAGACA+AGG | + | chr3_2:86001483-86001502 | None:intergenic | 40.0% | |
| !! | GTCTATTTTTCTCTGCCAAC+TGG | - | chr3_2:86001510-86001529 | Msa0433530:CDS | 40.0% |
| TGAGGAATGAAAAGTCTGCA+AGG | + | chr3_2:86001542-86001561 | None:intergenic | 40.0% | |
| CTGATGCATTTCCTTTCACA+AGG | - | chr3_2:86001819-86001838 | Msa0433530:intron | 40.0% | |
| TCATGTCTCTTCCTTGTGAA+AGG | + | chr3_2:86001833-86001852 | None:intergenic | 40.0% | |
| TTTCACAAGGAAGAGACATG+AGG | - | chr3_2:86001832-86001851 | Msa0433530:intron | 40.0% | |
| ATTGTGGTTGCGGTCAAATA+TGG | - | chr3_2:86002015-86002034 | Msa0433530:CDS | 40.0% | |
| CAAGTCCTAGAGTGCATTTA+TGG | - | chr3_2:86002083-86002102 | Msa0433530:CDS | 40.0% | |
| ATGTTTCATCGTTGCATTGC+AGG | - | chr3_2:86002133-86002152 | Msa0433530:CDS | 40.0% | |
| ! | AAATAGCCCAACAGTTTTCC+CGG | + | chr3_2:86002177-86002196 | None:intergenic | 40.0% |
| ! | ATCTGCAAGTTGAATGGTGA+AGG | + | chr3_2:86002231-86002250 | None:intergenic | 40.0% |
| ! | GTATGCATCTGCAAGTTGAA+TGG | + | chr3_2:86002237-86002256 | None:intergenic | 40.0% |
| TCCCATATGAAGACAGAACA+AGG | - | chr3_2:86002366-86002385 | Msa0433530:intron | 40.0% | |
| ! | GCCTTGTTCTGTCTTCATAT+GGG | + | chr3_2:86002370-86002389 | None:intergenic | 40.0% |
| ! | TGCCTTGTTCTGTCTTCATA+TGG | + | chr3_2:86002371-86002390 | None:intergenic | 40.0% |
| !! | TTGGTTTTCATTGGACCAGA+TGG | - | chr3_2:86002431-86002450 | Msa0433530:intron | 40.0% |
| CAGTTCATGATCTCCTCATA+CGG | - | chr3_2:86002476-86002495 | Msa0433530:intron | 40.0% | |
| TTGATATCCTCAACCTGTTG+AGG | + | chr3_2:86002578-86002597 | None:intergenic | 40.0% | |
| GTAAGAAACAAGGCAAGTTC+TGG | - | chr3_2:86002651-86002670 | Msa0433530:CDS | 40.0% | |
| TCATCCTAGTTGTCTTGAGA+AGG | - | chr3_2:86002706-86002725 | Msa0433530:five_prime_UTR | 40.0% | |
| TTGACCTTCTCAAGACAACT+AGG | + | chr3_2:86002713-86002732 | None:intergenic | 40.0% | |
| AGGTCAACAATGACCAATGT+TGG | - | chr3_2:86002726-86002745 | Msa0433530:intron | 40.0% | |
| !! | ATGAGCTACTTTGGTAGTGA+TGG | - | chr3_2:86002789-86002808 | Msa0433530:intron | 40.0% |
| !! | TGAGCTACTTTGGTAGTGAT+GGG | - | chr3_2:86002790-86002809 | Msa0433530:intron | 40.0% |
| ! | TCCCTTCCTTTAGAAGTGTA+TGG | - | chr3_2:86002958-86002977 | Msa0433530:five_prime_UTR | 40.0% |
| ! | CCCATACACTTCTAAAGGAA+GGG | + | chr3_2:86002962-86002981 | None:intergenic | 40.0% |
| ! | CCCTTCCTTTAGAAGTGTAT+GGG | - | chr3_2:86002959-86002978 | Msa0433530:five_prime_UTR | 40.0% |
| ! | TCCCATACACTTCTAAAGGA+AGG | + | chr3_2:86002963-86002982 | None:intergenic | 40.0% |
| TGATGATCACGTAATATGGG+AGG | + | chr3_2:86000827-86000846 | None:intergenic | 40.0% | |
| ! | GTGAGTACATCTGTTTTCTG+AGG | - | chr3_2:86001122-86001141 | Msa0433530:CDS | 40.0% |
| !!! | TCTGTTTTCTGAGGCTCTTA+TGG | - | chr3_2:86001131-86001150 | Msa0433530:CDS | 40.0% |
| ! | TGACAGCTTTGATGTTCTGA+AGG | - | chr3_2:86001185-86001204 | Msa0433530:CDS | 40.0% |
| CCTTCCCTTCACAAGATAAA+AGG | + | chr3_2:86001236-86001255 | None:intergenic | 40.0% | |
| ! | CCTTTTATCTTGTGAAGGGA+AGG | - | chr3_2:86001233-86001252 | Msa0433530:CDS | 40.0% |
| !! | CAGATTTTAGTGTCGCAACA+GGG | + | chr3_2:86001368-86001387 | None:intergenic | 40.0% |
| TACCCTTGTCTGATTGCAAT+GGG | - | chr3_2:86001477-86001496 | Msa0433530:CDS | 40.0% | |
| TTCCCATTGCAATCAGACAA+GGG | + | chr3_2:86001482-86001501 | None:intergenic | 40.0% | |
| TTTCCCATTGCAATCAGACA+AGG | + | chr3_2:86001483-86001502 | None:intergenic | 40.0% | |
| !! | GTCTATTTTTCTCTGCCAAC+TGG | - | chr3_2:86001510-86001529 | Msa0433530:CDS | 40.0% |
| TGAGGAATGAAAAGTCTGCA+AGG | + | chr3_2:86001542-86001561 | None:intergenic | 40.0% | |
| CTGATGCATTTCCTTTCACA+AGG | - | chr3_2:86001819-86001838 | Msa0433530:intron | 40.0% | |
| TCATGTCTCTTCCTTGTGAA+AGG | + | chr3_2:86001833-86001852 | None:intergenic | 40.0% | |
| TTTCACAAGGAAGAGACATG+AGG | - | chr3_2:86001832-86001851 | Msa0433530:intron | 40.0% | |
| ATTGTGGTTGCGGTCAAATA+TGG | - | chr3_2:86002015-86002034 | Msa0433530:CDS | 40.0% | |
| CAAGTCCTAGAGTGCATTTA+TGG | - | chr3_2:86002083-86002102 | Msa0433530:CDS | 40.0% | |
| ATGTTTCATCGTTGCATTGC+AGG | - | chr3_2:86002133-86002152 | Msa0433530:CDS | 40.0% | |
| ! | AAATAGCCCAACAGTTTTCC+CGG | + | chr3_2:86002177-86002196 | None:intergenic | 40.0% |
| ! | ATCTGCAAGTTGAATGGTGA+AGG | + | chr3_2:86002231-86002250 | None:intergenic | 40.0% |
| ! | GTATGCATCTGCAAGTTGAA+TGG | + | chr3_2:86002237-86002256 | None:intergenic | 40.0% |
| TCCCATATGAAGACAGAACA+AGG | - | chr3_2:86002366-86002385 | Msa0433530:intron | 40.0% | |
| ! | GCCTTGTTCTGTCTTCATAT+GGG | + | chr3_2:86002370-86002389 | None:intergenic | 40.0% |
| ! | TGCCTTGTTCTGTCTTCATA+TGG | + | chr3_2:86002371-86002390 | None:intergenic | 40.0% |
| !! | TTGGTTTTCATTGGACCAGA+TGG | - | chr3_2:86002431-86002450 | Msa0433530:intron | 40.0% |
| CAGTTCATGATCTCCTCATA+CGG | - | chr3_2:86002476-86002495 | Msa0433530:intron | 40.0% | |
| TTGATATCCTCAACCTGTTG+AGG | + | chr3_2:86002578-86002597 | None:intergenic | 40.0% | |
| GTAAGAAACAAGGCAAGTTC+TGG | - | chr3_2:86002651-86002670 | Msa0433530:CDS | 40.0% | |
| TCATCCTAGTTGTCTTGAGA+AGG | - | chr3_2:86002706-86002725 | Msa0433530:five_prime_UTR | 40.0% | |
| TTGACCTTCTCAAGACAACT+AGG | + | chr3_2:86002713-86002732 | None:intergenic | 40.0% | |
| AGGTCAACAATGACCAATGT+TGG | - | chr3_2:86002726-86002745 | Msa0433530:intron | 40.0% | |
| !! | ATGAGCTACTTTGGTAGTGA+TGG | - | chr3_2:86002789-86002808 | Msa0433530:intron | 40.0% |
| !! | TGAGCTACTTTGGTAGTGAT+GGG | - | chr3_2:86002790-86002809 | Msa0433530:intron | 40.0% |
| ! | TCCCTTCCTTTAGAAGTGTA+TGG | - | chr3_2:86002958-86002977 | Msa0433530:five_prime_UTR | 40.0% |
| ! | CCCATACACTTCTAAAGGAA+GGG | + | chr3_2:86002962-86002981 | None:intergenic | 40.0% |
| ! | CCCTTCCTTTAGAAGTGTAT+GGG | - | chr3_2:86002959-86002978 | Msa0433530:five_prime_UTR | 40.0% |
| ! | TCCCATACACTTCTAAAGGA+AGG | + | chr3_2:86002963-86002982 | None:intergenic | 40.0% |
| TCACATAGGTACAACCTTGC+AGG | - | chr3_2:86000875-86000894 | Msa0433530:three_prime_UTR | 45.0% | |
| TTCAACAAGTGTGAGGTGTG+AGG | - | chr3_2:86000992-86001011 | Msa0433530:three_prime_UTR | 45.0% | |
| TCAACAAGTGTGAGGTGTGA+GGG | - | chr3_2:86000993-86001012 | Msa0433530:three_prime_UTR | 45.0% | |
| !!! | TTTTCTGAGGCTCTTATGGC+AGG | - | chr3_2:86001135-86001154 | Msa0433530:CDS | 45.0% |
| !! | TTTCTGAGGCTCTTATGGCA+GGG | - | chr3_2:86001136-86001155 | Msa0433530:CDS | 45.0% |
| ! | CTGAAGGTTTTTGCAGCTGA+AGG | - | chr3_2:86001201-86001220 | Msa0433530:CDS | 45.0% |
| !! | CCAGATTTTAGTGTCGCAAC+AGG | + | chr3_2:86001369-86001388 | None:intergenic | 45.0% |
| CCTGTTGCGACACTAAAATC+TGG | - | chr3_2:86001366-86001385 | Msa0433530:CDS | 45.0% | |
| GTACCCTTGTCTGATTGCAA+TGG | - | chr3_2:86001476-86001495 | Msa0433530:CDS | 45.0% | |
| CTTTAAACCCATCCTCGTCA+TGG | + | chr3_2:86001634-86001653 | None:intergenic | 45.0% | |
| ! | AACACATCAAGAGTATGCCG+TGG | - | chr3_2:86001654-86001673 | Msa0433530:CDS | 45.0% |
| GGACGCAACTTTCTCATTTC+AGG | - | chr3_2:86001920-86001939 | Msa0433530:CDS | 45.0% | |
| !! | CACTCTAGGACTTGACATCA+AGG | + | chr3_2:86002077-86002096 | None:intergenic | 45.0% |
| GTGCTTGTATCTGAACTAGC+CGG | - | chr3_2:86002155-86002174 | Msa0433530:CDS | 45.0% | |
| TGCTTGTATCTGAACTAGCC+GGG | - | chr3_2:86002156-86002175 | Msa0433530:CDS | 45.0% | |
| AACTAGCCGGGAAAACTGTT+GGG | - | chr3_2:86002168-86002187 | Msa0433530:CDS | 45.0% | |
| ! | TGAATGGTGAAGGCATGACA+AGG | + | chr3_2:86002221-86002240 | None:intergenic | 45.0% |
| TCAACAGAACTAGCATGCCT+TGG | - | chr3_2:86002336-86002355 | Msa0433530:CDS | 45.0% | |
| TCATATGGGATAGCAAGCCA+AGG | + | chr3_2:86002356-86002375 | None:intergenic | 45.0% | |
| GGTCCAATGAAAACCAAAGC+TGG | + | chr3_2:86002428-86002447 | None:intergenic | 45.0% | |
| AAAAGCTTCTGCTCCGTATG+AGG | + | chr3_2:86002492-86002511 | None:intergenic | 45.0% | |
| TCACATAGGTACAACCTTGC+AGG | - | chr3_2:86000875-86000894 | Msa0433530:three_prime_UTR | 45.0% | |
| TTCAACAAGTGTGAGGTGTG+AGG | - | chr3_2:86000992-86001011 | Msa0433530:three_prime_UTR | 45.0% | |
| TCAACAAGTGTGAGGTGTGA+GGG | - | chr3_2:86000993-86001012 | Msa0433530:three_prime_UTR | 45.0% | |
| !!! | TTTTCTGAGGCTCTTATGGC+AGG | - | chr3_2:86001135-86001154 | Msa0433530:CDS | 45.0% |
| !! | TTTCTGAGGCTCTTATGGCA+GGG | - | chr3_2:86001136-86001155 | Msa0433530:CDS | 45.0% |
| ! | CTGAAGGTTTTTGCAGCTGA+AGG | - | chr3_2:86001201-86001220 | Msa0433530:CDS | 45.0% |
| !! | CCAGATTTTAGTGTCGCAAC+AGG | + | chr3_2:86001369-86001388 | None:intergenic | 45.0% |
| CCTGTTGCGACACTAAAATC+TGG | - | chr3_2:86001366-86001385 | Msa0433530:CDS | 45.0% | |
| GTACCCTTGTCTGATTGCAA+TGG | - | chr3_2:86001476-86001495 | Msa0433530:CDS | 45.0% | |
| CTTTAAACCCATCCTCGTCA+TGG | + | chr3_2:86001634-86001653 | None:intergenic | 45.0% | |
| ! | AACACATCAAGAGTATGCCG+TGG | - | chr3_2:86001654-86001673 | Msa0433530:CDS | 45.0% |
| GGACGCAACTTTCTCATTTC+AGG | - | chr3_2:86001920-86001939 | Msa0433530:CDS | 45.0% | |
| !! | CACTCTAGGACTTGACATCA+AGG | + | chr3_2:86002077-86002096 | None:intergenic | 45.0% |
| GTGCTTGTATCTGAACTAGC+CGG | - | chr3_2:86002155-86002174 | Msa0433530:CDS | 45.0% | |
| TGCTTGTATCTGAACTAGCC+GGG | - | chr3_2:86002156-86002175 | Msa0433530:CDS | 45.0% | |
| AACTAGCCGGGAAAACTGTT+GGG | - | chr3_2:86002168-86002187 | Msa0433530:CDS | 45.0% | |
| ! | TGAATGGTGAAGGCATGACA+AGG | + | chr3_2:86002221-86002240 | None:intergenic | 45.0% |
| TCAACAGAACTAGCATGCCT+TGG | - | chr3_2:86002336-86002355 | Msa0433530:CDS | 45.0% | |
| TCATATGGGATAGCAAGCCA+AGG | + | chr3_2:86002356-86002375 | None:intergenic | 45.0% | |
| GGTCCAATGAAAACCAAAGC+TGG | + | chr3_2:86002428-86002447 | None:intergenic | 45.0% | |
| AAAAGCTTCTGCTCCGTATG+AGG | + | chr3_2:86002492-86002511 | None:intergenic | 45.0% | |
| TCTGCAAGGTCTACACCAGT+TGG | + | chr3_2:86001528-86001547 | None:intergenic | 50.0% | |
| CATCTCCTTTGACCATGACG+AGG | - | chr3_2:86001619-86001638 | Msa0433530:CDS | 50.0% | |
| TCCTTTGACCATGACGAGGA+TGG | - | chr3_2:86001623-86001642 | Msa0433530:CDS | 50.0% | |
| CCTTTGACCATGACGAGGAT+GGG | - | chr3_2:86001624-86001643 | Msa0433530:CDS | 50.0% | |
| TCAAATGGGACAGCTAGCCA+CGG | + | chr3_2:86001674-86001693 | None:intergenic | 50.0% | |
| CGGTCAAATATGGCTGATGC+AGG | - | chr3_2:86002025-86002044 | Msa0433530:CDS | 50.0% | |
| GAACTAGCCGGGAAAACTGT+TGG | - | chr3_2:86002167-86002186 | Msa0433530:CDS | 50.0% | |
| !!! | GGCTATTTTTCGGTGCCTAC+TGG | - | chr3_2:86002189-86002208 | Msa0433530:CDS | 50.0% |
| ATGACAAGGAGGAGACCAGT+AGG | + | chr3_2:86002207-86002226 | None:intergenic | 50.0% | |
| ! | ATGGTGAAGGCATGACAAGG+AGG | + | chr3_2:86002218-86002237 | None:intergenic | 50.0% |
| TTTAGAAGCGGCCCTGAGAA+AGG | - | chr3_2:86002538-86002557 | Msa0433530:intron | 50.0% | |
| AGCCTCTCCTTCCTTTCTCA+GGG | + | chr3_2:86002552-86002571 | None:intergenic | 50.0% | |
| AAGCCTCTCCTTCCTTTCTC+AGG | + | chr3_2:86002553-86002572 | None:intergenic | 50.0% | |
| TCTGCAAGGTCTACACCAGT+TGG | + | chr3_2:86001528-86001547 | None:intergenic | 50.0% | |
| CATCTCCTTTGACCATGACG+AGG | - | chr3_2:86001619-86001638 | Msa0433530:CDS | 50.0% | |
| TCCTTTGACCATGACGAGGA+TGG | - | chr3_2:86001623-86001642 | Msa0433530:CDS | 50.0% | |
| CCTTTGACCATGACGAGGAT+GGG | - | chr3_2:86001624-86001643 | Msa0433530:CDS | 50.0% | |
| TCAAATGGGACAGCTAGCCA+CGG | + | chr3_2:86001674-86001693 | None:intergenic | 50.0% | |
| CGGTCAAATATGGCTGATGC+AGG | - | chr3_2:86002025-86002044 | Msa0433530:CDS | 50.0% | |
| GAACTAGCCGGGAAAACTGT+TGG | - | chr3_2:86002167-86002186 | Msa0433530:CDS | 50.0% | |
| !!! | GGCTATTTTTCGGTGCCTAC+TGG | - | chr3_2:86002189-86002208 | Msa0433530:CDS | 50.0% |
| ATGACAAGGAGGAGACCAGT+AGG | + | chr3_2:86002207-86002226 | None:intergenic | 50.0% | |
| ! | ATGGTGAAGGCATGACAAGG+AGG | + | chr3_2:86002218-86002237 | None:intergenic | 50.0% |
| TTTAGAAGCGGCCCTGAGAA+AGG | - | chr3_2:86002538-86002557 | Msa0433530:intron | 50.0% | |
| AGCCTCTCCTTCCTTTCTCA+GGG | + | chr3_2:86002552-86002571 | None:intergenic | 50.0% | |
| AAGCCTCTCCTTCCTTTCTC+AGG | + | chr3_2:86002553-86002572 | None:intergenic | 50.0% | |
| CCCATCCTCGTCATGGTCAA+AGG | + | chr3_2:86001627-86001646 | None:intergenic | 55.0% | |
| ! | ATGCAGGCGTTGCTATTGCG+TGG | - | chr3_2:86002041-86002060 | Msa0433530:CDS | 55.0% |
| AGGAGAGGCTTTGCCTCAAC+AGG | - | chr3_2:86002562-86002581 | Msa0433530:intron | 55.0% | |
| GGCTTTGCCTCAACAGGTTG+AGG | - | chr3_2:86002568-86002587 | Msa0433530:intron | 55.0% | |
| CCCATCCTCGTCATGGTCAA+AGG | + | chr3_2:86001627-86001646 | None:intergenic | 55.0% | |
| ! | ATGCAGGCGTTGCTATTGCG+TGG | - | chr3_2:86002041-86002060 | Msa0433530:CDS | 55.0% |
| AGGAGAGGCTTTGCCTCAAC+AGG | - | chr3_2:86002562-86002581 | Msa0433530:intron | 55.0% | |
| GGCTTTGCCTCAACAGGTTG+AGG | - | chr3_2:86002568-86002587 | Msa0433530:intron | 55.0% | |
| GAAGCGGCCCTGAGAAAGGA+AGG | - | chr3_2:86002542-86002561 | Msa0433530:intron | 60.0% | |
| GGCCCTGAGAAAGGAAGGAG+AGG | - | chr3_2:86002547-86002566 | Msa0433530:intron | 60.0% | |
| GAAGCGGCCCTGAGAAAGGA+AGG | - | chr3_2:86002542-86002561 | Msa0433530:intron | 60.0% | |
| GGCCCTGAGAAAGGAAGGAG+AGG | - | chr3_2:86002547-86002566 | Msa0433530:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 86000799 | 86003038 | 86000799 | ID=Msa0433530;Name=Msa0433530 |
| chr3_2 | mRNA | 86000799 | 86003038 | 86000799 | ID=Msa0433530-mRNA-1;Parent=Msa0433530;Name=Msa0433530-mRNA-1;_AED=0.05;_eAED=0.05;_QI=135|1|1|1|0.66|0.5|4|287|393 |
| chr3_2 | exon | 86000799 | 86001682 | 86000799 | ID=Msa0433530-mRNA-1:exon:24788;Parent=Msa0433530-mRNA-1 |
| chr3_2 | exon | 86001882 | 86002361 | 86001882 | ID=Msa0433530-mRNA-1:exon:24787;Parent=Msa0433530-mRNA-1 |
| chr3_2 | exon | 86002583 | 86002738 | 86002583 | ID=Msa0433530-mRNA-1:exon:24786;Parent=Msa0433530-mRNA-1 |
| chr3_2 | exon | 86002955 | 86003038 | 86002955 | ID=Msa0433530-mRNA-1:exon:24785;Parent=Msa0433530-mRNA-1 |
| chr3_2 | five_prime_UTR | 86002955 | 86003038 | 86002955 | ID=Msa0433530-mRNA-1:five_prime_utr;Parent=Msa0433530-mRNA-1 |
| chr3_2 | five_prime_UTR | 86002688 | 86002738 | 86002688 | ID=Msa0433530-mRNA-1:five_prime_utr;Parent=Msa0433530-mRNA-1 |
| chr3_2 | CDS | 86002583 | 86002687 | 86002583 | ID=Msa0433530-mRNA-1:cds;Parent=Msa0433530-mRNA-1 |
| chr3_2 | CDS | 86001882 | 86002361 | 86001882 | ID=Msa0433530-mRNA-1:cds;Parent=Msa0433530-mRNA-1 |
| chr3_2 | CDS | 86001086 | 86001682 | 86001086 | ID=Msa0433530-mRNA-1:cds;Parent=Msa0433530-mRNA-1 |
| chr3_2 | three_prime_UTR | 86000799 | 86001085 | 86000799 | ID=Msa0433530-mRNA-1:three_prime_utr;Parent=Msa0433530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
