AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0673470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0673470 MtrunA17_Chr4g0014101 87.654 324 25 2 243 551 24 347 0.0 526
Msa0673470 MtrunA17_Chr4g0014101 76.596 282 25 4 1 243 2 281 2.47e-127 376
Msa0673470 MtrunA17_Chr4g0014141 67.901 324 88 3 244 551 17 340 7.85e-151 436
Msa0673470 MtrunA17_Chr4g0014141 55.914 279 86 6 1 245 1 276 7.09e-92 285
Msa0673470 MtrunA17_Chr4g0014161 69.355 310 81 1 245 540 21 330 9.97e-147 426
Msa0673470 MtrunA17_Chr4g0014161 54.513 277 79 5 8 245 10 278 7.51e-87 273
Msa0673470 MtrunA17_Chr4g0014111 80.534 262 33 3 243 486 24 285 2.25e-139 405
Msa0673470 MtrunA17_Chr4g0014111 73.592 284 34 4 1 243 2 285 8.00e-136 396
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0673470 AT1G33970.1 55.000 320 126 3 244 546 20 338 8.50e-105 318
Msa0673470 AT1G33970.1 46.619 281 101 5 1 243 6 275 1.09e-67 223
Msa0673470 AT1G33970.2 55.000 320 126 3 244 546 20 338 8.50e-105 318
Msa0673470 AT1G33970.2 46.619 281 101 5 1 243 6 275 1.09e-67 223
Msa0673470 AT1G33970.4 55.000 320 126 3 244 546 20 338 8.50e-105 318
Msa0673470 AT1G33970.4 46.619 281 101 5 1 243 6 275 1.09e-67 223
Msa0673470 AT1G33970.5 55.000 320 126 3 244 546 20 338 8.50e-105 318
Msa0673470 AT1G33970.5 46.619 281 101 5 1 243 6 275 1.09e-67 223
Msa0673470 AT1G33970.3 55.642 257 99 2 244 486 20 275 9.26e-85 265
Msa0673470 AT1G33970.3 46.619 281 101 5 1 243 6 275 1.02e-67 220
Msa0673470 AT1G33950.2 47.744 266 130 2 244 501 12 276 1.65e-77 247
Msa0673470 AT1G33950.2 42.609 230 105 6 32 243 41 261 1.35e-44 160
Msa0673470 AT1G33950.1 46.691 272 130 2 244 501 12 282 1.46e-76 244
Msa0673470 AT1G33950.1 43.043 230 110 4 32 243 41 267 2.18e-50 176
Msa0673470 AT1G33960.1 49.481 289 126 4 250 519 44 331 4.41e-76 245
Msa0673470 AT1G33960.1 47.679 237 103 3 28 246 63 296 1.96e-57 196
Msa0673470 AT4G09940.1 44.482 299 146 7 248 529 47 342 4.82e-76 246
Msa0673470 AT4G09940.1 40.000 230 116 7 33 243 73 299 1.43e-46 168
Msa0673470 AT1G33900.1 46.520 273 130 3 244 501 14 285 6.58e-76 243
Msa0673470 AT1G33900.1 40.435 230 116 4 32 243 44 270 4.47e-47 167
Msa0673470 AT1G33960.2 49.481 289 126 4 250 519 68 355 1.29e-75 244
Msa0673470 AT1G33960.2 47.679 237 103 3 28 246 87 320 4.84e-57 196
Msa0673470 AT4G09940.2 44.482 299 146 7 248 529 90 385 2.45e-75 246
Msa0673470 AT4G09940.2 40.000 230 116 7 33 243 116 342 8.48e-46 167
Msa0673470 AT1G33930.1 45.614 285 137 4 234 501 18 301 3.07e-73 237
Msa0673470 AT1G33930.1 38.828 273 131 5 32 278 60 322 1.26e-51 180
Msa0673470 AT2G26820.2 46.619 281 127 5 249 512 6 280 1.37e-72 236
Msa0673470 AT2G26820.2 42.396 217 105 4 30 228 28 242 1.64e-46 167
Msa0673470 AT2G26820.1 44.089 313 151 6 249 543 6 312 3.46e-72 238
Msa0673470 AT2G26820.1 42.523 214 103 4 33 228 31 242 1.30e-44 164
Msa0673470 AT2G26820.4 46.619 281 127 5 249 512 6 280 4.46e-72 235
Msa0673470 AT2G26820.4 42.523 214 103 4 33 228 31 242 5.63e-46 166
Msa0673470 AT4G09950.1 43.168 322 161 7 249 551 18 336 1.78e-71 232
Msa0673470 AT4G09950.1 37.358 265 135 8 6 244 10 269 6.91e-44 159
Msa0673470 AT2G26820.3 44.660 309 147 6 249 539 6 308 6.24e-71 235
Msa0673470 AT2G26820.3 42.523 214 103 4 33 228 31 242 1.22e-44 165
Msa0673470 AT4G09930.1 40.938 320 163 7 248 551 26 335 5.95e-64 213
Msa0673470 AT4G09930.1 35.088 228 108 5 1 190 1 226 2.88e-34 132
Msa0673470 AT1G33910.1 44.891 274 128 5 244 501 8 274 6.63e-63 209
Msa0673470 AT1G33910.1 40.625 224 103 6 43 243 43 259 7.01e-40 147
Msa0673470 AT1G33830.1 48.571 210 94 1 250 445 10 219 5.96e-60 198
Msa0673470 AT1G33830.1 46.471 170 73 2 46 197 47 216 3.00e-41 149
Msa0673470 AT1G33890.1 41.111 270 143 3 240 494 4 272 9.55e-60 201
Msa0673470 AT1G33890.1 37.903 248 126 4 32 254 38 282 6.93e-41 151
Msa0673470 AT1G33890.2 41.111 270 143 3 240 494 4 272 9.55e-60 201
Msa0673470 AT1G33890.2 37.903 248 126 4 32 254 38 282 6.93e-41 151
Msa0673470 AT1G33870.1 41.767 249 129 2 273 507 1 247 6.34e-58 194
Msa0673470 AT1G33870.1 40.870 230 114 5 32 243 1 226 7.00e-46 162
Msa0673470 AT4G09950.2 42.000 250 137 6 307 551 27 273 3.01e-47 166
Msa0673470 AT4G09950.2 38.725 204 102 6 60 244 7 206 8.33e-32 124
Msa0673470 AT1G33880.2 39.614 207 105 3 248 440 23 223 4.56e-45 159
Msa0673470 AT1G33880.2 34.848 198 106 4 17 196 32 224 7.22e-34 129
Msa0673470 AT1G33880.1 39.614 207 105 3 248 440 23 223 4.56e-45 159
Msa0673470 AT1G33880.1 34.848 198 106 4 17 196 32 224 7.22e-34 129

Find 118 sgRNAs with CRISPR-Local

Find 555 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCAGCTTGCAGACATTATT+TGG 0.113186 4_4:+19794474 Msa0673470:CDS
TGCAGCTTGCAGACATTATT+TGG 0.173812 4_4:+19789615 Msa0673470:CDS
GATACACTTGACGACTATTT+AGG 0.229662 4_4:+19794561 Msa0673470:CDS
GCAAATAACTCATCTGTATA+AGG 0.230890 4_4:-19795438 None:intergenic
TCTGCTGGATCTGAGTTTAT+TGG 0.235468 4_4:+19789486 Msa0673470:CDS
GATACACTTGCCGATTATTT+AGG 0.253738 4_4:+19789702 Msa0673470:CDS
ATAAATACCTTCAAAGATTC+TGG 0.277659 4_4:-19794594 None:intergenic
CTGCTGGATCTGAGTTTATT+GGG 0.278196 4_4:+19789487 Msa0673470:CDS
GCAAATAACTCATGTGTATA+GGG 0.291498 4_4:-19790490 None:intergenic
TGAAGCTCGGACAGTGGTTT+TGG 0.303565 4_4:+19793179 Msa0673470:CDS
TAATAGTATTCTTGGGAAAA+AGG 0.341397 4_4:+19793236 Msa0673470:CDS
GAAGTTATGTTGAAGATGAT+TGG 0.342560 4_4:+19788614 Msa0673470:CDS
TGCAAATAACTCATGTGTAT+AGG 0.363264 4_4:-19790491 None:intergenic
GCAACCGGTAATAGTATTCT+TGG 0.374174 4_4:+19793228 Msa0673470:CDS
TTTCCCAAGAATACTATTAC+CGG 0.377468 4_4:-19793232 None:intergenic
GTGGTCTTCACGGGAGGGGA+TGG 0.382910 4_4:+19794522 Msa0673470:CDS
GCAAAGAAAGATTGATTCCT+TGG 0.383767 4_4:+19795583 Msa0673470:CDS
GTAGATTGAGTCAAAGTTGA+AGG 0.398135 4_4:+19797579 Msa0673470:intron
GCGAAGAAAGATTGATTCCT+TGG 0.412451 4_4:+19790635 Msa0673470:CDS
AAGTTATGTTGAAGATGATT+GGG 0.420774 4_4:+19788615 Msa0673470:CDS
ACATTCACCGCCTAAATAAT+CGG 0.431303 4_4:-19789712 None:intergenic
ATGAACATCATTAGCTGATC+CGG 0.437986 4_4:-19788650 None:intergenic
GGATTATTTGAAGTTTCTGC+TGG 0.441692 4_4:+19789471 Msa0673470:intron
AGGTCGAGGGCTAGCTCGTC+CGG 0.446801 4_4:+19788769 Msa0673470:CDS
CTATATGATTGTGGTCTTCA+CGG 0.447172 4_4:+19794512 Msa0673470:CDS
CTATATGATCGTGGTCTTCA+CGG 0.451497 4_4:+19789653 Msa0673470:CDS
TTGGTTGGACGTACTGGCAA+TGG 0.452994 4_4:+19793198 Msa0673470:CDS
AAGTCTAGGGCTAGCTCGTC+CGG 0.453629 4_4:+19793264 Msa0673470:CDS
GTGGTCTTCACGGGAGGGGA+TGG 0.461079 4_4:+19789663 Msa0673470:CDS
AGCAGAAGACACTGCAAAGT+TGG 0.461820 4_4:+19797657 Msa0673470:CDS
GCATATGCAGCAAACATATG+AGG 0.468304 4_4:+19795643 Msa0673470:CDS
TGAGTTATTTGCAGAACTAA+AGG 0.471603 4_4:+19790501 Msa0673470:CDS
CTCTGCAAGCGAGGTGGCAA+GGG 0.472911 4_4:+19797745 Msa0673470:CDS
TGAGTTATTTGCAAAACTAA+AGG 0.476964 4_4:+19795449 Msa0673470:CDS
TGGTCTTCACGGGAGGGGAT+GGG 0.479682 4_4:+19794523 Msa0673470:CDS
GGCAATGGGAAGAGTGCAAC+CGG 0.480272 4_4:+19793213 Msa0673470:CDS
GCAATCAAGATTTCATAATC+CGG 0.484220 4_4:-19797831 None:intergenic
TGCATTGACTTTGCCAAGGA+TGG 0.487528 4_4:+19789525 Msa0673470:CDS
GATTGGGAGTTAGCGTCATC+CGG 0.490210 4_4:+19788631 Msa0673470:CDS
CAACCGGTAATAGTATTCTT+GGG 0.491758 4_4:+19793229 Msa0673470:CDS
GAGCAATGAAACTGCATAGC+GGG 0.493316 4_4:+19795561 Msa0673470:CDS
TCTCTTTGACAACAAGACTA+AGG 0.507101 4_4:+19795338 Msa0673470:CDS
TGAATGTCCAGAGTCTTTGA+AGG 0.507892 4_4:+19789728 Msa0673470:CDS
TATATGATTGTGGTCTTCAC+GGG 0.509376 4_4:+19794513 Msa0673470:CDS
GAGCAATGGAACTGCATAGC+GGG 0.513212 4_4:+19790613 Msa0673470:CDS
AAGGACGAAAAGAAGCGATC+TGG 0.516709 4_4:+19795357 Msa0673470:CDS
AAGGACGAAAAGAAGCGATC+TGG 0.518274 4_4:+19790409 Msa0673470:CDS
TGGTTGGACGTACTGGCAAT+GGG 0.520804 4_4:+19793199 Msa0673470:CDS
GTCAATGTTATTGACACTCC+AGG 0.521632 4_4:+19788844 Msa0673470:CDS
GTCAATGTTATTGACACTCC+AGG 0.521632 4_4:+19793339 Msa0673470:CDS
TGAATGTCCAGAATCTTTGA+AGG 0.531693 4_4:+19794587 Msa0673470:CDS
TATATGATCGTGGTCTTCAC+GGG 0.533417 4_4:+19789654 Msa0673470:CDS
GGGGATGGACTAGAAGATGA+TGG 0.534525 4_4:+19789678 Msa0673470:CDS
ATTTGCAGAACTAAAGGTGG+AGG 0.534568 4_4:+19790507 Msa0673470:CDS
TGCATTGACTTTGCCATGGA+TGG 0.537933 4_4:+19794384 Msa0673470:CDS
CATGGCAAAGTCAATGCACT+TGG 0.538402 4_4:-19794379 None:intergenic
TGGTGTTATCTGTCAGATCA+CGG 0.542518 4_4:+19789565 Msa0673470:CDS
TGATAGTATCACAGAATGGC+GGG 0.545440 4_4:+19795412 Msa0673470:CDS
AGAAAGATTGATTCCTTGGA+AGG 0.546720 4_4:+19790639 Msa0673470:CDS
ACTCTGCAAGCGAGGTGGCA+AGG 0.548096 4_4:+19797744 Msa0673470:CDS
GATCGTGGTCTTCACGGGAG+GGG 0.549312 4_4:+19789659 Msa0673470:CDS
GATTGTGGTCTTCACGGGAG+GGG 0.549312 4_4:+19794518 Msa0673470:CDS
GATGGCATGGATACCATCCT+TGG 0.552483 4_4:-19789538 None:intergenic
AGCGAATCCTCTCTTTGTGT+GGG 0.559155 4_4:+19795304 Msa0673470:intron
TGATAGTATCACAGAATGGT+GGG 0.562437 4_4:+19790464 Msa0673470:CDS
TTGATTTCAGAAAGGAGCAA+TGG 0.564384 4_4:+19790599 Msa0673470:intron
TAGCGAATCCTCTCTTTGTG+TGG 0.566017 4_4:+19795303 Msa0673470:intron
ATATTTCAGCTAATGAAGCT+CGG 0.568952 4_4:+19788671 Msa0673470:CDS
AGCAGCATGCATTTCACAAG+AGG 0.571620 4_4:-19788800 None:intergenic
TGATTGGAATTTATGATGGG+GGG 0.573203 4_4:+19788592 None:intergenic
TGATTGTGGTCTTCACGGGA+GGG 0.573707 4_4:+19794517 Msa0673470:CDS
AGCTAATGAAGCTCGGACAG+TGG 0.575504 4_4:+19788678 Msa0673470:CDS
AGCTAATGAAGCTCGGACAG+TGG 0.575504 4_4:+19793173 Msa0673470:CDS
GCTAAAACATATTACTGAGA+TGG 0.577150 4_4:+19795670 Msa0673470:CDS
AGATTTCAGCTAATGAAGCT+CGG 0.577288 4_4:+19793166 Msa0673470:intron
AGCAGTCTGCATTTCACAAG+AGG 0.579383 4_4:-19793295 None:intergenic
GACAGATAACACCACAAGGA+TGG 0.579932 4_4:-19789556 None:intergenic
ACGATGAAATACGAGAACTA+AGG 0.583971 4_4:+19797695 Msa0673470:CDS
TGATCGTGGTCTTCACGGGA+GGG 0.592418 4_4:+19789658 Msa0673470:CDS
AACGATTCCCACACAAAGAG+AGG 0.592811 4_4:-19795311 None:intergenic
TTGATAGTATCACAGAATGG+TGG 0.594891 4_4:+19790463 Msa0673470:CDS
AACAGATAACACCACAAGGA+TGG 0.595518 4_4:-19794415 None:intergenic
ATAACACCACAAGGATGGCA+TGG 0.596816 4_4:-19789551 None:intergenic
ATAACACCACAAGGATGGCA+TGG 0.596816 4_4:-19794410 None:intergenic
ATGATTGTGGTCTTCACGGG+AGG 0.597619 4_4:+19794516 Msa0673470:CDS
CATGAAGAACTCTGCAAGCG+AGG 0.599719 4_4:+19797736 Msa0673470:CDS
GATTGTTGACTATATGATTG+TGG 0.602009 4_4:+19794503 Msa0673470:CDS
GTTATTTGCAGAACTAAAGG+TGG 0.606234 4_4:+19790504 Msa0673470:CDS
AGCGCTACAAGATCATAGAA+TGG 0.606561 4_4:-19797773 None:intergenic
GCTAAAACATATTACTGAGA+CGG 0.608958 4_4:+19790722 Msa0673470:CDS
AGTTGAAGGAGGCAACTACA+AGG 0.610652 4_4:+19797593 Msa0673470:CDS
ATGATCGTGGTCTTCACGGG+AGG 0.612755 4_4:+19789657 Msa0673470:CDS
ACACTTGCCGATTATTTAGG+CGG 0.621336 4_4:+19789705 Msa0673470:CDS
CAAGTGCATTGACTTTGCCA+AGG 0.621929 4_4:+19789521 Msa0673470:CDS
AGCTTGATAGTATCACAGAA+TGG 0.625086 4_4:+19790460 Msa0673470:CDS
TGTTAGATCACGATTTAGTG+AGG 0.625357 4_4:+19794434 Msa0673470:CDS
AACTTGATAGTATCACAGAA+TGG 0.627543 4_4:+19795408 Msa0673470:CDS
CATGCTGCTGAGTTGAGTGA+TGG 0.628624 4_4:+19788814 Msa0673470:CDS
AGAACTAAGGAAGCATCTTG+AGG 0.630454 4_4:+19797708 Msa0673470:CDS
GATGGCATGGATACCATCCA+TGG 0.631402 4_4:-19794397 None:intergenic
CAGACTGCTGAGTTGAGTGA+TGG 0.635531 4_4:+19793309 Msa0673470:CDS
TTCACAAGAGGAAGTGACAC+CGG 0.638052 4_4:-19788788 None:intergenic
TTCACAAGAGGAAGTGACAC+CGG 0.638052 4_4:-19793283 None:intergenic
GGAGGCAACTACAAGGCTTG+AGG 0.640090 4_4:+19797600 Msa0673470:CDS
GCATATGCAGCAAACATACG+AGG 0.641389 4_4:+19790695 Msa0673470:CDS
TGGTATCCATGCCATCCTTG+TGG 0.652793 4_4:+19789545 Msa0673470:CDS
TGGTATCCATGCCATCCTTG+TGG 0.652793 4_4:+19794404 Msa0673470:CDS
GATTGAGTCAAAGTTGAAGG+AGG 0.654673 4_4:+19797582 Msa0673470:intron
CAAGTGCATTGACTTTGCCA+TGG 0.654919 4_4:+19794380 Msa0673470:CDS
GATTGTTGACTATATGATCG+TGG 0.655429 4_4:+19789644 Msa0673470:CDS
GAAGAACTCTGCAAGCGAGG+TGG 0.661750 4_4:+19797739 Msa0673470:CDS
CAATCAAAATAAGTGTTCAG+TGG 0.663004 4_4:-19797885 None:intergenic
TTGATAGTATCACAGAATGG+CGG 0.664615 4_4:+19795411 Msa0673470:CDS
ACTAAGGAAGCATCTTGAGG+AGG 0.684028 4_4:+19797711 Msa0673470:CDS
ATCTAACAGATAACACCACA+AGG 0.685054 4_4:-19794419 None:intergenic
ATCTGACAGATAACACCACA+AGG 0.690950 4_4:-19789560 None:intergenic
GGAGCAATGAAACTGCATAG+CGG 0.740098 4_4:+19795560 Msa0673470:CDS
GGAGCAATGGAACTGCATAG+CGG 0.743379 4_4:+19790612 Msa0673470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTTTTAATATTTTT+TGG + chr4_4:19790827-19790846 Msa0673470:intron 0.0%
!!! TTTATTTTTTTAATATTTTT+TGG + chr4_4:19790827-19790846 Msa0673470:intron 0.0%
!! TAGAATAAAAACATAAATAT+GGG - chr4_4:19789794-19789813 None:intergenic 10.0%
!! ATAGAATAAAAACATAAATA+TGG - chr4_4:19789795-19789814 None:intergenic 10.0%
!! TTATTATTACTCTTAATAAA+AGG + chr4_4:19789879-19789898 Msa0673470:intron 10.0%
!!! TACTTTTCTTTTTTAAATTA+CGG - chr4_4:19790241-19790260 None:intergenic 10.0%
!! AAAAAAATGTTATATTGTTA+TGG - chr4_4:19791136-19791155 None:intergenic 10.0%
!!! AATTAATAATTACTTTTAGA+TGG + chr4_4:19792234-19792253 Msa0673470:intron 10.0%
!!! TTTTAAACATGTTATAATTA+TGG + chr4_4:19792440-19792459 Msa0673470:intron 10.0%
!! TTTAAACATGTTATAATTAT+GGG + chr4_4:19792441-19792460 Msa0673470:intron 10.0%
!!! AATTATTAATTTTTCTATAG+AGG - chr4_4:19795251-19795270 None:intergenic 10.0%
!! TTTAATAAGGAAAATAATTA+TGG + chr4_4:19796143-19796162 Msa0673470:intron 10.0%
!! TTAAAAAATTTAAGAGTTTA+AGG + chr4_4:19797049-19797068 Msa0673470:intron 10.0%
!!! GTAAATTTTTTTTTTTTTGT+AGG + chr4_4:19797114-19797133 Msa0673470:intron 10.0%
!! TTAAATATCTCAATTATTAG+CGG + chr4_4:19788925-19788944 Msa0673470:intron 15.0%
!!! TAAAACATCGTTAATTTTTT+AGG + chr4_4:19789028-19789047 Msa0673470:intron 15.0%
!!! AAAACATCGTTAATTTTTTA+GGG + chr4_4:19789029-19789048 Msa0673470:intron 15.0%
!!! TAATTTTGTTGATCTTTAAT+TGG + chr4_4:19790318-19790337 Msa0673470:intron 15.0%
!! AATATTAGGAATTAAGTAAT+GGG + chr4_4:19791039-19791058 Msa0673470:intron 15.0%
!!! AATTTTGGGTTTTTTTTTTT+TGG - chr4_4:19791165-19791184 None:intergenic 15.0%
!!! TTTTTTTTTTTGAGTGAATA+AGG + chr4_4:19792127-19792146 Msa0673470:intron 15.0%
!!! ACCAAAATTTGTTAAATTAA+AGG - chr4_4:19792934-19792953 None:intergenic 15.0%
!!! TGGTTAATTTTGTTATTTAT+TGG + chr4_4:19792950-19792969 Msa0673470:intron 15.0%
!!! TAAATTATCTCAATTTTTAC+CGG + chr4_4:19793425-19793444 Msa0673470:intron 15.0%
!!! TTCTTTTTGAAAAAGTTTAA+AGG + chr4_4:19793873-19793892 Msa0673470:intron 15.0%
!! AATGAAAAAAAAATAATCCA+TGG - chr4_4:19794661-19794680 None:intergenic 15.0%
!! GTATTAATACTCTTAATAAA+AGG + chr4_4:19794746-19794765 Msa0673470:intron 15.0%
!!! AATTTTTTCCAGATAAAATA+AGG - chr4_4:19795089-19795108 None:intergenic 15.0%
!!! TATTTTATCTGGAAAAAATT+AGG + chr4_4:19795089-19795108 Msa0673470:intron 15.0%
!!! TAATTTTGTTGATCTTTAAT+TGG + chr4_4:19790318-19790337 Msa0673470:intron 15.0%
!! AATATCAGTAATTAAGTAAT+GGG + chr4_4:19795987-19796006 Msa0673470:intron 15.0%
!!! TTATTTTCCTTATTAAAAGT+TGG - chr4_4:19796140-19796159 None:intergenic 15.0%
!!! ATTCAATTTTCACATTAATT+AGG - chr4_4:19796434-19796453 None:intergenic 15.0%
!! TAACAAAATTAATTCACTTT+GGG + chr4_4:19796457-19796476 Msa0673470:intron 15.0%
!! GTTCAAATATAATTTATTCT+TGG - chr4_4:19796640-19796659 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr4_4:19796727-19796746 None:intergenic 15.0%
!! AAGCATAAATTAAACAAATT+TGG - chr4_4:19796799-19796818 None:intergenic 15.0%
!!! AATTTTTGCGATATTTTTTT+CGG - chr4_4:19796883-19796902 None:intergenic 15.0%
!! AGATATAAGTAACAAAAATA+TGG - chr4_4:19796918-19796937 None:intergenic 15.0%
!!! TAAACAAAATTTATTTTAGC+AGG + chr4_4:19797077-19797096 Msa0673470:intron 15.0%
!!! AAACAAAATTTATTTTAGCA+GGG + chr4_4:19797078-19797097 Msa0673470:intron 15.0%
!! AAAGCTATTAAAATTATGTA+AGG + chr4_4:19797144-19797163 Msa0673470:intron 15.0%
!!! TGCAATTTAATTTTAAACTT+GGG - chr4_4:19797218-19797237 None:intergenic 15.0%
!!! TTGCAATTTAATTTTAAACT+TGG - chr4_4:19797219-19797238 None:intergenic 15.0%
!!! GTTTTAGATTTTATCAAAAA+AGG + chr4_4:19797316-19797335 Msa0673470:intron 15.0%
!!! TTTTTGTTTGATCAATTATA+TGG + chr4_4:19797553-19797572 Msa0673470:intron 15.0%
!!! TTAACGATGTTTTATTTCTA+GGG - chr4_4:19789022-19789041 None:intergenic 20.0%
!!! ATTAACGATGTTTTATTTCT+AGG - chr4_4:19789023-19789042 None:intergenic 20.0%
!! TTGAAAAATATAGACACAAA+AGG - chr4_4:19790750-19790769 None:intergenic 20.0%
!! CAATATTAGGAATTAAGTAA+TGG + chr4_4:19791038-19791057 Msa0673470:intron 20.0%
!!! TATATTCTTTTTCCATTTCA+TGG + chr4_4:19791066-19791085 Msa0673470:intron 20.0%
!!! ATATTCTTTTTCCATTTCAT+GGG + chr4_4:19791067-19791086 Msa0673470:intron 20.0%
!! AAAAAGATAAGAAATTCACA+AGG - chr4_4:19791108-19791127 None:intergenic 20.0%
!! TGTGATTTAATCTATATAAG+AGG - chr4_4:19791198-19791217 None:intergenic 20.0%
!!! AATAGAAAAGACTCTTTTTT+AGG - chr4_4:19791234-19791253 None:intergenic 20.0%
!!! GACGTAAAATTTTGTTTTTT+TGG - chr4_4:19791290-19791309 None:intergenic 20.0%
!! TTGAACTTATATATTGGATT+GGG - chr4_4:19791312-19791331 None:intergenic 20.0%
!!! TCTTGATTCAACAATTTTTT+TGG + chr4_4:19791527-19791546 Msa0673470:intron 20.0%
!!! TGGTTTAGTTTCTTAATTAT+TGG + chr4_4:19791547-19791566 Msa0673470:intron 20.0%
!! TAACTTTCTCAAATTATCAT+CGG + chr4_4:19791659-19791678 Msa0673470:intron 20.0%
!!! ATATGAAAATTTCAAGTATC+AGG - chr4_4:19792730-19792749 None:intergenic 20.0%
!!! AATAAGATTTTGTTGTTGTT+AGG - chr4_4:19792771-19792790 None:intergenic 20.0%
!!! GCCTTTAATTTAACAAATTT+TGG + chr4_4:19792930-19792949 Msa0673470:intron 20.0%
!!! TTAATTTCTTTTCAGTGATT+TGG + chr4_4:19793072-19793091 Msa0673470:intron 20.0%
!!! CCTTTGATAATAAAAATCAT+CGG - chr4_4:19793791-19793810 None:intergenic 20.0%
!!! CTATTTCTTTTTTTATTCCA+TGG + chr4_4:19794641-19794660 Msa0673470:intron 20.0%
!! AAAAAACATATATCACAAAG+GGG - chr4_4:19794870-19794889 None:intergenic 20.0%
!! GAAAAAACATATATCACAAA+GGG - chr4_4:19794871-19794890 None:intergenic 20.0%
!! AGAAAAAACATATATCACAA+AGG - chr4_4:19794872-19794891 None:intergenic 20.0%
!!! TTTGTGATATATGTTTTTTC+TGG + chr4_4:19794871-19794890 Msa0673470:intron 20.0%
!! TTCATATATTTATTGCAGAA+AGG + chr4_4:19795539-19795558 Msa0673470:intron 20.0%
!! CAATATCAGTAATTAAGTAA+TGG + chr4_4:19795986-19796005 Msa0673470:intron 20.0%
!!! TATATTCTTTTTCCATTTCA+TGG + chr4_4:19791066-19791085 Msa0673470:intron 20.0%
!! AATAAGGAAAATAATTATGG+AGG + chr4_4:19796146-19796165 Msa0673470:intron 20.0%
!! ATAAGGAAAATAATTATGGA+GGG + chr4_4:19796147-19796166 Msa0673470:intron 20.0%
!!! AATTTTCACATTAATTAGGA+AGG - chr4_4:19796430-19796449 None:intergenic 20.0%
!! CTAACAAAATTAATTCACTT+TGG + chr4_4:19796456-19796475 Msa0673470:intron 20.0%
!! ATTTGAACATCAAAGTTTAA+AGG + chr4_4:19796652-19796671 Msa0673470:intron 20.0%
!! TTTGAACATCAAAGTTTAAA+GGG + chr4_4:19796653-19796672 Msa0673470:intron 20.0%
!!! TAAAGGGTTAATTATGTTTT+TGG + chr4_4:19796669-19796688 Msa0673470:intron 20.0%
!!! GTTTTTCAACAATTTTTTAC+AGG + chr4_4:19796829-19796848 Msa0673470:intron 20.0%
!!! TTAGATTTTATCAAAAAAGG+AGG + chr4_4:19797319-19797338 Msa0673470:intron 20.0%
!! TTATAAGCTTGAACTTTATT+TGG + chr4_4:19797452-19797471 Msa0673470:intron 20.0%
!! ATCAAACAAAAAAATACTAG+GGG - chr4_4:19797545-19797564 None:intergenic 20.0%
!! GATCAAACAAAAAAATACTA+GGG - chr4_4:19797546-19797565 None:intergenic 20.0%
!! TGATCAAACAAAAAAATACT+AGG - chr4_4:19797547-19797566 None:intergenic 20.0%
!!! GATTTGTTTAAATTTTCTTC+CGG + chr4_4:19797812-19797831 Msa0673470:three_prime_UTR 20.0%
! AAGTTATGTTGAAGATGATT+GGG + chr4_4:19788615-19788634 Msa0673470:CDS 25.0%
! TTTCCCAATAATACTATTAC+CGG - chr4_4:19788740-19788759 None:intergenic 25.0%
! TAATAGTATTATTGGGAAAC+AGG + chr4_4:19788741-19788760 Msa0673470:intron 25.0%
! ATCTCCTTTGTATATGTAAA+GGG - chr4_4:19789205-19789224 None:intergenic 25.0%
! TTTCATGTTTCTTACAAGAT+TGG + chr4_4:19789232-19789251 Msa0673470:intron 25.0%
! ATGCTGAGAATAAAAATCAT+CGG - chr4_4:19789288-19789307 None:intergenic 25.0%
!! TTTAACCTGAAAAGTTTTAC+AGG + chr4_4:19789450-19789469 Msa0673470:intron 25.0%
!! ATAATCCTGTAAAACTTTTC+AGG - chr4_4:19789458-19789477 None:intergenic 25.0%
! TATGAGCATATAACTGTTTA+CGG + chr4_4:19789812-19789831 Msa0673470:intron 25.0%
!!! AGTCTTCTTACACATTTTTT+TGG + chr4_4:19789964-19789983 Msa0673470:intron 25.0%
!! GCTTGAATATCTAGAATTAT+AGG + chr4_4:19790013-19790032 Msa0673470:intron 25.0%
! TATATTACTTCAAAAACGCT+TGG - chr4_4:19790166-19790185 None:intergenic 25.0%
!!! TTTTTCTTTAAGGGTGTTTT+TGG - chr4_4:19790294-19790313 None:intergenic 25.0%
!! CAATCTTGTTTCTTAAATCT+TGG + chr4_4:19790545-19790564 Msa0673470:intron 25.0%
!!! TTCGTATATTGATTTCAGAA+AGG + chr4_4:19790591-19790610 Msa0673470:intron 25.0%
!!! TTGGGTTTTTTTTTTTTGGA+AGG - chr4_4:19791161-19791180 None:intergenic 25.0%
! GTTGAACTTATATATTGGAT+TGG - chr4_4:19791313-19791332 None:intergenic 25.0%
! GAAAATTCAGTAATTTGAAC+AGG + chr4_4:19791863-19791882 Msa0673470:intron 25.0%
!! TCATCTCTTATTTAAGTTCA+AGG + chr4_4:19792311-19792330 Msa0673470:intron 25.0%
! AAGATACTGCTTCTAAATAA+CGG - chr4_4:19792653-19792672 None:intergenic 25.0%
!!! AAAATCTTATTTCTGTAGCA+TGG + chr4_4:19792780-19792799 Msa0673470:intron 25.0%
! TATGATGACACTAATCAATA+TGG - chr4_4:19793026-19793045 None:intergenic 25.0%
! TAATAGTATTCTTGGGAAAA+AGG + chr4_4:19793236-19793255 Msa0673470:CDS 25.0%
!!! TGAACATTGTTTTATTTCCA+GGG - chr4_4:19793537-19793556 None:intergenic 25.0%
!!! TTGAACATTGTTTTATTTCC+AGG - chr4_4:19793538-19793557 None:intergenic 25.0%
!! AAACAATGTTCAAACTTTTG+AGG + chr4_4:19793545-19793564 Msa0673470:intron 25.0%
!! AACAATGTTCAAACTTTTGA+GGG + chr4_4:19793546-19793565 Msa0673470:intron 25.0%
!! CCGATGATTTTTATTATCAA+AGG + chr4_4:19793788-19793807 Msa0673470:intron 25.0%
!! GATTTTTATTATCAAAGGAG+AGG + chr4_4:19793793-19793812 Msa0673470:intron 25.0%
!! TAAAGTAGATTTTGTGAGAT+GGG + chr4_4:19793828-19793847 Msa0673470:intron 25.0%
! ATGCCAAGAATATTATTCTA+GGG - chr4_4:19793937-19793956 None:intergenic 25.0%
! CCTTGTGAATAAAAACAAAA+AGG - chr4_4:19794174-19794193 None:intergenic 25.0%
!!! CCTTTTTGTTTTTATTCACA+AGG + chr4_4:19794171-19794190 Msa0673470:intron 25.0%
!! TTTAACCTGAAAAGTTTTAC+AGG + chr4_4:19789450-19789469 Msa0673470:intron 25.0%
!! ATAATCCTGTAAAACTTTTC+AGG - chr4_4:19789458-19789477 None:intergenic 25.0%
! ATAAATACCTTCAAAGATTC+TGG - chr4_4:19794597-19794616 None:intergenic 25.0%
! TTAGTGATTCGTATCAATAA+AGG - chr4_4:19794809-19794828 None:intergenic 25.0%
! TCTTCTATCTTGTAATCTTA+TGG + chr4_4:19795010-19795029 Msa0673470:intron 25.0%
!! TTTTCCAGATAAAATAAGGA+AGG - chr4_4:19795085-19795104 None:intergenic 25.0%
! TGTTTGCATGTTGTTATAAT+TGG + chr4_4:19795159-19795178 Msa0673470:intron 25.0%
! TGAGTTATTTGCAAAACTAA+AGG + chr4_4:19795449-19795468 Msa0673470:CDS 25.0%
!! CTATCTTGTTTCTTTAATCT+TGG + chr4_4:19795493-19795512 Msa0673470:intron 25.0%
!!! TGTTTCCATTTTTGTATGTA+CGG + chr4_4:19796113-19796132 Msa0673470:intron 25.0%
! ATAAATTGTCAAACCTAGTT+TGG + chr4_4:19796336-19796355 Msa0673470:intron 25.0%
! ACATATTGAAATGTGCATTA+GGG + chr4_4:19796517-19796536 Msa0673470:intron 25.0%
! TAACTCATATTACAAACTCA+TGG - chr4_4:19796587-19796606 None:intergenic 25.0%
!!! GAGTGTAGAATTTTTTTGTA+GGG - chr4_4:19796756-19796775 None:intergenic 25.0%
!!! TGAGTGTAGAATTTTTTTGT+AGG - chr4_4:19796757-19796776 None:intergenic 25.0%
! AAACAAATTTGGATTGAGTA+AGG - chr4_4:19796788-19796807 None:intergenic 25.0%
! GTGTTAAGAACGTTATTAAA+AGG + chr4_4:19796853-19796872 Msa0673470:intron 25.0%
!! ACTTGGGTTAAATATGTTTT+TGG - chr4_4:19797202-19797221 None:intergenic 25.0%
! GTCATGAGAATATTATTTAG+AGG - chr4_4:19797486-19797505 None:intergenic 25.0%
GAAGTTATGTTGAAGATGAT+TGG + chr4_4:19788614-19788633 Msa0673470:CDS 30.0%
ATATTTCAGCTAATGAAGCT+CGG + chr4_4:19788671-19788690 Msa0673470:CDS 30.0%
CAACCGGTAATAGTATTATT+GGG + chr4_4:19788734-19788753 Msa0673470:intron 30.0%
! TTATTGGGAAACAGGTTTTT+AGG + chr4_4:19788749-19788768 Msa0673470:intron 30.0%
GTATATGTAAAGGGTCTTTA+AGG - chr4_4:19789196-19789215 None:intergenic 30.0%
AAGACCCTTTACATATACAA+AGG + chr4_4:19789198-19789217 Msa0673470:intron 30.0%
CATCTCCTTTGTATATGTAA+AGG - chr4_4:19789206-19789225 None:intergenic 30.0%
CTTTACATATACAAAGGAGA+TGG + chr4_4:19789204-19789223 Msa0673470:intron 30.0%
! TATTCTCAGCATGAAGTTTT+TGG + chr4_4:19789296-19789315 Msa0673470:intron 30.0%
CATAACTCAAACAAAACCAT+AGG - chr4_4:19789368-19789387 None:intergenic 30.0%
!! CAAACTTTTCAAGAAGTAGA+AGG - chr4_4:19789424-19789443 None:intergenic 30.0%
ATAAAAACCTTCAAAGACTC+TGG - chr4_4:19789738-19789757 None:intergenic 30.0%
! TTTTGGATTGAGGATTTAGA+AGG - chr4_4:19790277-19790296 None:intergenic 30.0%
GCAAATAACTCATGTGTATA+GGG - chr4_4:19790493-19790512 None:intergenic 30.0%
TGCAAATAACTCATGTGTAT+AGG - chr4_4:19790494-19790513 None:intergenic 30.0%
TGAGTTATTTGCAGAACTAA+AGG + chr4_4:19790501-19790520 Msa0673470:CDS 30.0%
GCTAAAACATATTACTGAGA+CGG + chr4_4:19790722-19790741 Msa0673470:CDS 30.0%
TATATACATGCATTTCTGCA+TGG + chr4_4:19790866-19790885 Msa0673470:intron 30.0%
CTTAAAGCTCGTTCAATATT+AGG + chr4_4:19791025-19791044 Msa0673470:intron 30.0%
! TCTATATAAGAGGACTTTTG+AGG - chr4_4:19791188-19791207 None:intergenic 30.0%
! GACTGGTTGAACTTATATAT+TGG - chr4_4:19791318-19791337 None:intergenic 30.0%
AAACGATGATGATCAATGAT+TGG - chr4_4:19791441-19791460 None:intergenic 30.0%
TAAAAGATGATGTAGCTAAG+AGG - chr4_4:19791471-19791490 None:intergenic 30.0%
TTGAAAGTAATCACATGTGT+CGG - chr4_4:19791634-19791653 None:intergenic 30.0%
!!! ACTGAATTTTCAAGTCTGAA+CGG - chr4_4:19791854-19791873 None:intergenic 30.0%
AGTAATTTGAACAGGAGAAA+AGG + chr4_4:19791871-19791890 Msa0673470:intron 30.0%
AAGCACAAGAATATAAGAAC+AGG + chr4_4:19791918-19791937 Msa0673470:intron 30.0%
AATATAAGAACAGGAGAAGA+AGG + chr4_4:19791927-19791946 Msa0673470:intron 30.0%
! TGAATCTTATCTTTTGTACC+AGG + chr4_4:19791954-19791973 Msa0673470:intron 30.0%
TTTGTTCATTCTCTTTGTTC+AGG + chr4_4:19792077-19792096 Msa0673470:intron 30.0%
!! GAATAAGGTTTGTTATCACT+TGG + chr4_4:19792142-19792161 Msa0673470:intron 30.0%
AAATTAAAGGCTCTTAAGCA+CGG - chr4_4:19792921-19792940 None:intergenic 30.0%
AAGCTATGTTGAAGATGATT+GGG + chr4_4:19793110-19793129 Msa0673470:intron 30.0%
TTTCCCAAGAATACTATTAC+CGG - chr4_4:19793235-19793254 None:intergenic 30.0%
GAAAAAGGTCTTTAAGTCTA+GGG + chr4_4:19793251-19793270 Msa0673470:CDS 30.0%
ATTAGTCGAGTTTAAACTGA+GGG + chr4_4:19793649-19793668 Msa0673470:intron 30.0%
TTTATTATCAAAGGAGAGGT+TGG + chr4_4:19793797-19793816 Msa0673470:intron 30.0%
TTATTATCAAAGGAGAGGTT+GGG + chr4_4:19793798-19793817 Msa0673470:intron 30.0%
! GTAAAGTAGATTTTGTGAGA+TGG + chr4_4:19793827-19793846 Msa0673470:intron 30.0%
TTAAAGGAGCTTTACAGATT+TGG + chr4_4:19793889-19793908 Msa0673470:intron 30.0%
ATGCCCTAGAATAATATTCT+TGG + chr4_4:19793931-19793950 Msa0673470:intron 30.0%
CATGCCAAGAATATTATTCT+AGG - chr4_4:19793938-19793957 None:intergenic 30.0%
!!! ATTCTTGGCATGATGTTTTT+TGG + chr4_4:19793946-19793965 Msa0673470:intron 30.0%
!!! TTTTTGGAATGTCATTCACA+AGG + chr4_4:19789312-19789331 Msa0673470:intron 30.0%
!! ATTCACAAGGATTGATTTGA+GGG + chr4_4:19793975-19793994 Msa0673470:intron 30.0%
!! TTACCATGTTTTTACACAAG+AGG - chr4_4:19794072-19794091 None:intergenic 30.0%
TCTTGTGTAAAAACATGGTA+AGG + chr4_4:19794071-19794090 Msa0673470:intron 30.0%
TACAATACACCAAATATGGT+GGG + chr4_4:19794099-19794118 Msa0673470:intron 30.0%
!! CAAACTTTTCAAGAAGTAGA+AGG - chr4_4:19789424-19789443 None:intergenic 30.0%
! GATTGTTGACTATATGATTG+TGG + chr4_4:19794503-19794522 Msa0673470:CDS 30.0%
TGATTCGTATCAATAAAGGA+GGG - chr4_4:19794805-19794824 None:intergenic 30.0%
AATATGTCTTCTTACGCATT+TGG + chr4_4:19794827-19794846 Msa0673470:intron 30.0%
AAATTCCCATTTGAACCATT+TGG + chr4_4:19794914-19794933 Msa0673470:intron 30.0%
AATCTCCAAATGGTTCAAAT+GGG - chr4_4:19794922-19794941 None:intergenic 30.0%
AAATCTCCAAATGGTTCAAA+TGG - chr4_4:19794923-19794942 None:intergenic 30.0%
!! CACTGTTTTAAATCTCCAAA+TGG - chr4_4:19794932-19794951 None:intergenic 30.0%
TTAAAACAGTGATACACAGA+AGG + chr4_4:19794941-19794960 Msa0673470:intron 30.0%
AAATACGAGAGAAAAATGAC+GGG - chr4_4:19795055-19795074 None:intergenic 30.0%
CAAATACGAGAGAAAAATGA+CGG - chr4_4:19795056-19795075 None:intergenic 30.0%
!!! AATGCCTTCCTTATTTTATC+TGG + chr4_4:19795078-19795097 Msa0673470:intron 30.0%
! GCTTGAGTATCTAGAATTAT+AGG + chr4_4:19795208-19795227 Msa0673470:intron 30.0%
! AACTTGATAGTATCACAGAA+TGG + chr4_4:19795408-19795427 Msa0673470:CDS 30.0%
GCAAATAACTCATCTGTATA+AGG - chr4_4:19795441-19795460 None:intergenic 30.0%
GTTATTTGCAAAACTAAAGG+TGG + chr4_4:19795452-19795471 Msa0673470:intron 30.0%
! TTCTTTTGAATGTTCTTCCA+AGG - chr4_4:19795603-19795622 None:intergenic 30.0%
GCTAAAACATATTACTGAGA+TGG + chr4_4:19790722-19790741 Msa0673470:CDS 30.0%
TATATACATGCATTACTGCA+TGG + chr4_4:19795814-19795833 Msa0673470:intron 30.0%
! TTTTCCATTTCATGGTTCAT+AGG + chr4_4:19796022-19796041 Msa0673470:intron 30.0%
ATGTCTGTTACAAATTCACA+AGG - chr4_4:19796056-19796075 None:intergenic 30.0%
ATCTCATTGTTTAATCCTTG+TGG - chr4_4:19796179-19796198 None:intergenic 30.0%
CATCTTGATCATAAATCTCA+AGG + chr4_4:19796364-19796383 Msa0673470:intron 30.0%
GACATATTGAAATGTGCATT+AGG + chr4_4:19796516-19796535 Msa0673470:intron 30.0%
TATTACAAACTCATGGAATC+AGG - chr4_4:19796580-19796599 None:intergenic 30.0%
AGTTATGAAAACTGCAAGTT+GGG + chr4_4:19796602-19796621 Msa0673470:intron 30.0%
AAGTAAGGACTAAACTTACA+AGG - chr4_4:19796712-19796731 None:intergenic 30.0%
! CAAGTTTAGAACACTATGAA+AGG - chr4_4:19797015-19797034 None:intergenic 30.0%
ATGTAAGGACAAAACTTAGA+AGG + chr4_4:19797159-19797178 Msa0673470:intron 30.0%
! TTAGAAGGTCGCAATTTTAT+AGG + chr4_4:19797174-19797193 Msa0673470:intron 30.0%
! TAGAAGGTCGCAATTTTATA+GGG + chr4_4:19797175-19797194 Msa0673470:intron 30.0%
GCAATCAAGATTTCATAATC+CGG - chr4_4:19797834-19797853 None:intergenic 30.0%
CAATCAAAATAAGTGTTCAG+TGG - chr4_4:19797888-19797907 None:intergenic 30.0%
ATGAACATCATTAGCTGATC+CGG - chr4_4:19788653-19788672 None:intergenic 35.0%
GCAACCGGTAATAGTATTAT+TGG + chr4_4:19788733-19788752 Msa0673470:intron 35.0%
! TTTGGTATTCGTGTTTCTGT+TGG + chr4_4:19788961-19788980 Msa0673470:intron 35.0%
!! TGTTTCTGTTGGTGATTTGT+AGG + chr4_4:19788972-19788991 Msa0673470:intron 35.0%
ATTAGTCGAGTTTAAACCGA+GGG + chr4_4:19789140-19789159 Msa0673470:intron 35.0%
! GGATTATTTGAAGTTTCTGC+TGG + chr4_4:19789471-19789490 Msa0673470:intron 35.0%
! GATTGTTGACTATATGATCG+TGG + chr4_4:19789644-19789663 Msa0673470:CDS 35.0%
! GATACACTTGCCGATTATTT+AGG + chr4_4:19789702-19789721 Msa0673470:CDS 35.0%
ACATTCACCGCCTAAATAAT+CGG - chr4_4:19789715-19789734 None:intergenic 35.0%
TGATTCGTATCACTAAAGGA+GGG - chr4_4:19789938-19789957 None:intergenic 35.0%
CTAGTGATTCGTATCACTAA+AGG - chr4_4:19789942-19789961 None:intergenic 35.0%
TTATAGGAAAGTCTATCTGC+TGG + chr4_4:19790029-19790048 Msa0673470:intron 35.0%
!!! TTAAGGGTGTTTTTGGATTG+AGG - chr4_4:19790287-19790306 None:intergenic 35.0%
TAGCAAATTCTCTCTTTGTG+TGG + chr4_4:19790355-19790374 Msa0673470:intron 35.0%
AGCAAATTCTCTCTTTGTGT+GGG + chr4_4:19790356-19790375 Msa0673470:intron 35.0%
! AGCTTGATAGTATCACAGAA+TGG + chr4_4:19790460-19790479 Msa0673470:CDS 35.0%
! TTGATAGTATCACAGAATGG+TGG + chr4_4:19790463-19790482 Msa0673470:CDS 35.0%
TGATAGTATCACAGAATGGT+GGG + chr4_4:19790464-19790483 Msa0673470:CDS 35.0%
GTTATTTGCAGAACTAAAGG+TGG + chr4_4:19790504-19790523 Msa0673470:CDS 35.0%
TTGATTTCAGAAAGGAGCAA+TGG + chr4_4:19790599-19790618 Msa0673470:intron 35.0%
! AGAAAGATTGATTCCTTGGA+AGG + chr4_4:19790639-19790658 Msa0673470:CDS 35.0%
! TTCTTTTGAATGTCCTTCCA+AGG - chr4_4:19790655-19790674 None:intergenic 35.0%
! CAGCATTGAATGCAACTATT+TGG - chr4_4:19790956-19790975 None:intergenic 35.0%
TCAATGCTGTTAGCTATTAC+TGG + chr4_4:19790967-19790986 Msa0673470:intron 35.0%
!!! GTTTTGACTTGATGTCACTT+AGG + chr4_4:19790991-19791010 Msa0673470:intron 35.0%
! TTTTCCATTTCATGGGTCAT+AGG + chr4_4:19791074-19791093 Msa0673470:intron 35.0%
TAAGAAATTCACAAGGCCAT+TGG - chr4_4:19791101-19791120 None:intergenic 35.0%
!! GAGGACTTTTGAGGAATTTT+GGG - chr4_4:19791179-19791198 None:intergenic 35.0%
!! AGAGGACTTTTGAGGAATTT+TGG - chr4_4:19791180-19791199 None:intergenic 35.0%
ATATAAGTTCAACCAGTCGT+TGG + chr4_4:19791320-19791339 Msa0673470:intron 35.0%
TATAAGTTCAACCAGTCGTT+GGG + chr4_4:19791321-19791340 Msa0673470:intron 35.0%
CTTTCTCAAATTATCATCGG+CGG + chr4_4:19791662-19791681 Msa0673470:intron 35.0%
! TTTTTGTTCTCGACGTGAAA+AGG - chr4_4:19791780-19791799 None:intergenic 35.0%
CAAAATCAAAATCGCCGTTA+CGG + chr4_4:19791806-19791825 Msa0673470:intron 35.0%
TAGTAACTAGCTACGAATCA+AGG - chr4_4:19792698-19792717 None:intergenic 35.0%
! TCAGTGATTTGGATTTGTGA+TGG + chr4_4:19793083-19793102 Msa0673470:intron 35.0%
! CAGTGATTTGGATTTGTGAT+GGG + chr4_4:19793084-19793103 Msa0673470:intron 35.0%
! AGTGATTTGGATTTGTGATG+GGG + chr4_4:19793085-19793104 Msa0673470:intron 35.0%
GAAGCTATGTTGAAGATGAT+TGG + chr4_4:19793109-19793128 Msa0673470:intron 35.0%
TGTTGAAGATGATTGGGAAT+TGG + chr4_4:19793116-19793135 Msa0673470:intron 35.0%
AGATTTCAGCTAATGAAGCT+CGG + chr4_4:19793166-19793185 Msa0673470:intron 35.0%
CAACCGGTAATAGTATTCTT+GGG + chr4_4:19793229-19793248 Msa0673470:CDS 35.0%
GGAAAAAGGTCTTTAAGTCT+AGG + chr4_4:19793250-19793269 Msa0673470:CDS 35.0%
!! TAAGTTGGCTTGTATTTACC+TGG - chr4_4:19793360-19793379 None:intergenic 35.0%
AGGTAAATACAAGCCAACTT+AGG + chr4_4:19793359-19793378 Msa0673470:intron 35.0%
! TGTCCATATCTGTGTTTTGT+AGG + chr4_4:19793603-19793622 Msa0673470:intron 35.0%
CATCCTACAAAACACAGATA+TGG - chr4_4:19793609-19793628 None:intergenic 35.0%
! GATTAGTCGAGTTTAAACTG+AGG + chr4_4:19793648-19793667 Msa0673470:intron 35.0%
TTAGTCGAGTTTAAACTGAG+GGG + chr4_4:19793650-19793669 Msa0673470:intron 35.0%
!!! GTAAAGGGTTTTGAAGGAAT+GGG - chr4_4:19793699-19793718 None:intergenic 35.0%
!!! TGTAAAGGGTTTTGAAGGAA+TGG - chr4_4:19793700-19793719 None:intergenic 35.0%
!! TTGTGTGTAAAGGGTTTTGA+AGG - chr4_4:19793705-19793724 None:intergenic 35.0%
TCAAAACCCTTTACACACAA+AGG + chr4_4:19793705-19793724 Msa0673470:intron 35.0%
TCATCTCCTTTGTGTGTAAA+GGG - chr4_4:19793714-19793733 None:intergenic 35.0%
ATCATCTCCTTTGTGTGTAA+AGG - chr4_4:19793715-19793734 None:intergenic 35.0%
TGGGAATGAAATTTGATGTG+TGG + chr4_4:19793847-19793866 Msa0673470:intron 35.0%
!! CATTCACAAGGATTGATTTG+AGG + chr4_4:19793974-19793993 Msa0673470:intron 35.0%
!! TTCACAAGGATTGATTTGAG+GGG + chr4_4:19793976-19793995 Msa0673470:intron 35.0%
TGCGTACAATACACCAAATA+TGG + chr4_4:19794095-19794114 Msa0673470:intron 35.0%
GTACAATACACCAAATATGG+TGG + chr4_4:19794098-19794117 Msa0673470:intron 35.0%
TAAAAACAAAAAGGCCAACC+CGG - chr4_4:19794165-19794184 None:intergenic 35.0%
CATAACTCATTCAAAGCCAT+AGG - chr4_4:19794227-19794246 None:intergenic 35.0%
! GGATTATTTGAAGTTTCTGC+TGG + chr4_4:19789471-19789490 Msa0673470:intron 35.0%
ATCTAACAGATAACACCACA+AGG - chr4_4:19794422-19794441 None:intergenic 35.0%
TGTTAGATCACGATTTAGTG+AGG + chr4_4:19794434-19794453 Msa0673470:CDS 35.0%
CTATATGATTGTGGTCTTCA+CGG + chr4_4:19794512-19794531 Msa0673470:CDS 35.0%
TATATGATTGTGGTCTTCAC+GGG + chr4_4:19794513-19794532 Msa0673470:CDS 35.0%
GATACACTTGACGACTATTT+AGG + chr4_4:19794561-19794580 Msa0673470:CDS 35.0%
TGAATGTCCAGAATCTTTGA+AGG + chr4_4:19794587-19794606 Msa0673470:CDS 35.0%
GTGATTCGTATCAATAAAGG+AGG - chr4_4:19794806-19794825 None:intergenic 35.0%
!! CACAAAGGGGCATATTTTAA+AGG - chr4_4:19794857-19794876 None:intergenic 35.0%
AGGACAAATGAACTCTATGT+AGG + chr4_4:19794961-19794980 Msa0673470:intron 35.0%
!! TGTAGGTTATTAGCCTTTCT+TGG + chr4_4:19794978-19794997 Msa0673470:intron 35.0%
AAGAGCAAAACAACCAAGAA+AGG - chr4_4:19794994-19795013 None:intergenic 35.0%
TCTCTTTGACAACAAGACTA+AGG + chr4_4:19795338-19795357 Msa0673470:CDS 35.0%
! TTGATAGTATCACAGAATGG+CGG + chr4_4:19790463-19790482 Msa0673470:CDS 35.0%
ATTTGCAAAACTAAAGGTGG+AGG + chr4_4:19795455-19795474 Msa0673470:intron 35.0%
! GCAAAGAAAGATTGATTCCT+TGG + chr4_4:19795583-19795602 Msa0673470:CDS 35.0%
CAGCAATGAATGCAACTAAT+TGG - chr4_4:19795904-19795923 None:intergenic 35.0%
! TCATTGCTGTTAGCTATTAC+TGG + chr4_4:19795915-19795934 Msa0673470:intron 35.0%
!!! GTTTTGACTTGATGTCACTT+AGG + chr4_4:19790991-19791010 Msa0673470:intron 35.0%
TTACAAATTCACAAGGCCAT+TGG - chr4_4:19796049-19796068 None:intergenic 35.0%
TTGGTCCGTACATACAAAAA+TGG - chr4_4:19796121-19796140 None:intergenic 35.0%
! GTACGGACCAACTTTTAATA+AGG + chr4_4:19796130-19796149 Msa0673470:intron 35.0%
TAGGTAGGGGAAATTGTATT+GGG + chr4_4:19796249-19796268 Msa0673470:intron 35.0%
!! GATCTACTTGCATTTTGATC+AGG - chr4_4:19796297-19796316 None:intergenic 35.0%
GCAAGTAGATCTTGATCAAT+TGG + chr4_4:19796306-19796325 Msa0673470:intron 35.0%
CACATTAATTAGGAAGGAGT+TGG - chr4_4:19796424-19796443 None:intergenic 35.0%
TGTCACACCATACCATAAAT+GGG - chr4_4:19796500-19796519 None:intergenic 35.0%
ATGTCACACCATACCATAAA+TGG - chr4_4:19796501-19796520 None:intergenic 35.0%
GAGTTATGAAAACTGCAAGT+TGG + chr4_4:19796601-19796620 Msa0673470:intron 35.0%
! TACAAGGTCGCAATTTTGTA+GGG - chr4_4:19796696-19796715 None:intergenic 35.0%
! TTACAAGGTCGCAATTTTGT+AGG - chr4_4:19796697-19796716 None:intergenic 35.0%
ATTTACTTCTCCTGCTAAGA+GGG - chr4_4:19797365-19797384 None:intergenic 35.0%
AATTTACTTCTCCTGCTAAG+AGG - chr4_4:19797366-19797385 None:intergenic 35.0%
GTAGATTGAGTCAAAGTTGA+AGG + chr4_4:19797579-19797598 Msa0673470:intron 35.0%
ACGATGAAATACGAGAACTA+AGG + chr4_4:19797695-19797714 Msa0673470:CDS 35.0%
!!! GAAACAGGTTTTTAGGTCGA+GGG + chr4_4:19788756-19788775 Msa0673470:intron 40.0%
GTCAATGTTATTGACACTCC+AGG + chr4_4:19788844-19788863 Msa0673470:CDS 40.0%
TATGTAGGCGTGTATTTACC+TGG - chr4_4:19788865-19788884 None:intergenic 40.0%
AGGTAAATACACGCCTACAT+AGG + chr4_4:19788864-19788883 Msa0673470:intron 40.0%
TGACTGTCAATAGCCTATGT+AGG - chr4_4:19788880-19788899 None:intergenic 40.0%
! TAAGCACCCCATTTCGTTTT+TGG + chr4_4:19789063-19789082 Msa0673470:intron 40.0%
ACGGACACCAAAAACGAAAT+GGG - chr4_4:19789073-19789092 None:intergenic 40.0%
CATCCTACAAAACACAGACA+CGG - chr4_4:19789098-19789117 None:intergenic 40.0%
! GATTAGTCGAGTTTAAACCG+AGG + chr4_4:19789139-19789158 Msa0673470:intron 40.0%
!! CCATAGGTGTTACTTGTTTC+AGG - chr4_4:19789352-19789371 None:intergenic 40.0%
CCTGAAACAAGTAACACCTA+TGG + chr4_4:19789349-19789368 Msa0673470:intron 40.0%
TCTGCTGGATCTGAGTTTAT+TGG + chr4_4:19789486-19789505 Msa0673470:CDS 40.0%
CTGCTGGATCTGAGTTTATT+GGG + chr4_4:19789487-19789506 Msa0673470:CDS 40.0%
ATCTGACAGATAACACCACA+AGG - chr4_4:19789563-19789582 None:intergenic 40.0%
!! TGGTGTTATCTGTCAGATCA+CGG + chr4_4:19789565-19789584 Msa0673470:CDS 40.0%
TGCAGCTTGCAGACATTATT+TGG + chr4_4:19789615-19789634 Msa0673470:CDS 40.0%
CTATATGATCGTGGTCTTCA+CGG + chr4_4:19789653-19789672 Msa0673470:CDS 40.0%
TATATGATCGTGGTCTTCAC+GGG + chr4_4:19789654-19789673 Msa0673470:CDS 40.0%
! ACACTTGCCGATTATTTAGG+CGG + chr4_4:19789705-19789724 Msa0673470:CDS 40.0%
TGAATGTCCAGAGTCTTTGA+AGG + chr4_4:19789728-19789747 Msa0673470:CDS 40.0%
GTGATTCGTATCACTAAAGG+AGG - chr4_4:19789939-19789958 None:intergenic 40.0%
TGTGTTTGGATTGAGGGTTT+AGG + chr4_4:19790062-19790081 Msa0673470:intron 40.0%
TTTGGATTGAGGGTTTAGGA+GGG + chr4_4:19790066-19790085 Msa0673470:intron 40.0%
TTGAGGATTTAGAAGGAGAG+AGG - chr4_4:19790270-19790289 None:intergenic 40.0%
TCTCTTTGACAACAAGACCA+AGG + chr4_4:19790390-19790409 Msa0673470:intron 40.0%
ATTTGCAGAACTAAAGGTGG+AGG + chr4_4:19790507-19790526 Msa0673470:CDS 40.0%
! GCGAAGAAAGATTGATTCCT+TGG + chr4_4:19790635-19790654 Msa0673470:CDS 40.0%
ATAAGTTCAACCAGTCGTTG+GGG + chr4_4:19791322-19791341 Msa0673470:intron 40.0%
AAAAGGTCCAAAAACGGTCA+CGG - chr4_4:19791763-19791782 None:intergenic 40.0%
GACGTGAAAAGGTCCAAAAA+CGG - chr4_4:19791769-19791788 None:intergenic 40.0%
! AGATTGAGATTTGAGATGCC+TGG - chr4_4:19791975-19791994 None:intergenic 40.0%
GATACAAATAACGGTCTTCG+CGG - chr4_4:19792587-19792606 None:intergenic 40.0%
GGACGTTGCGATACAAATAA+CGG - chr4_4:19792596-19792615 None:intergenic 40.0%
GTTATTTGTATCGCAACGTC+CGG + chr4_4:19792595-19792614 Msa0673470:intron 40.0%
GCATGGACAATTCTGATCAA+AGG + chr4_4:19792797-19792816 Msa0673470:intron 40.0%
TACATGTGTTGTGTCAGTGT+AGG - chr4_4:19792835-19792854 None:intergenic 40.0%
! GTGATTTGGATTTGTGATGG+GGG + chr4_4:19793086-19793105 Msa0673470:intron 40.0%
! TGATTTGGATTTGTGATGGG+GGG + chr4_4:19793087-19793106 Msa0673470:intron 40.0%
GCAACCGGTAATAGTATTCT+TGG + chr4_4:19793228-19793247 Msa0673470:CDS 40.0%
GTCAATGTTATTGACACTCC+AGG + chr4_4:19788844-19788863 Msa0673470:CDS 40.0%
ATACAAGCCAACTTAGGCTA+TGG + chr4_4:19793365-19793384 Msa0673470:intron 40.0%
TAACTCTCCATAGCCTAAGT+TGG - chr4_4:19793375-19793394 None:intergenic 40.0%
!!! TTACCGGTGTCTGTTGTTTT+TGG + chr4_4:19793441-19793460 Msa0673470:intron 40.0%
ATGCCAAAAACAACAGACAC+CGG - chr4_4:19793447-19793466 None:intergenic 40.0%
!! GATTAGTCTAGTTTGAACCC+TGG + chr4_4:19793517-19793536 Msa0673470:intron 40.0%
! TAAGCACTCCATCTCGTTTT+TGG + chr4_4:19793580-19793599 Msa0673470:intron 40.0%
TATGGACACCAAAAACGAGA+TGG - chr4_4:19793591-19793610 None:intergenic 40.0%
!! ATTGATTTGAGGGGTAACCT+TGG + chr4_4:19793985-19794004 Msa0673470:intron 40.0%
GTTGTTGTCATGTGACTGAA+AGG + chr4_4:19794021-19794040 Msa0673470:intron 40.0%
TCATGTGACTGAAAGGTCAT+GGG + chr4_4:19794028-19794047 Msa0673470:intron 40.0%
CAGCCTCTTGTGTAAAAACA+TGG + chr4_4:19794066-19794085 Msa0673470:intron 40.0%
TCTGCTGGATCTGAGTTTAT+TGG + chr4_4:19789486-19789505 Msa0673470:CDS 40.0%
CTGCTGGATCTGAGTTTATT+GGG + chr4_4:19789487-19789506 Msa0673470:CDS 40.0%
AACAGATAACACCACAAGGA+TGG - chr4_4:19794418-19794437 None:intergenic 40.0%
ATAAAGGAGGGAGTTCAAGA+AGG - chr4_4:19794793-19794812 None:intergenic 40.0%
TGATAGTATCACAGAATGGC+GGG + chr4_4:19795412-19795431 Msa0673470:CDS 40.0%
GCATATGCAGCAAACATATG+AGG + chr4_4:19795643-19795662 Msa0673470:CDS 40.0%
TGGACCTATGAACCATGAAA+TGG - chr4_4:19796029-19796048 None:intergenic 40.0%
TTCATGGTTCATAGGTCCAA+TGG + chr4_4:19796030-19796049 Msa0673470:intron 40.0%
! TAGACACGTGCTTCCATTTT+TGG + chr4_4:19796080-19796099 Msa0673470:intron 40.0%
!! AGACACGTGCTTCCATTTTT+GGG + chr4_4:19796081-19796100 Msa0673470:intron 40.0%
TAGTTATTTGCGCTTCCTGT+AGG + chr4_4:19796207-19796226 Msa0673470:intron 40.0%
! AGTCAGAACCTTTGATAGCT+AGG + chr4_4:19796230-19796249 Msa0673470:intron 40.0%
! AGAACCTTTGATAGCTAGGT+AGG + chr4_4:19796234-19796253 Msa0673470:intron 40.0%
! GAACCTTTGATAGCTAGGTA+GGG + chr4_4:19796235-19796254 Msa0673470:intron 40.0%
! AACCTTTGATAGCTAGGTAG+GGG + chr4_4:19796236-19796255 Msa0673470:intron 40.0%
CTAGGTAGGGGAAATTGTAT+TGG + chr4_4:19796248-19796267 Msa0673470:intron 40.0%
TAGGGGAAATTGTATTGGGA+AGG + chr4_4:19796253-19796272 Msa0673470:intron 40.0%
TCAAGATGTGATGCCAAACT+AGG - chr4_4:19796352-19796371 None:intergenic 40.0%
TAATTCACTTTGGGCTGAGA+TGG + chr4_4:19796466-19796485 Msa0673470:intron 40.0%
ATGGTAAGAGGACCCATTTA+TGG + chr4_4:19796485-19796504 Msa0673470:intron 40.0%
AAGAGGACCCATTTATGGTA+TGG + chr4_4:19796490-19796509 Msa0673470:intron 40.0%
TGCATTAGGGATCAAAATGC+AGG + chr4_4:19796530-19796549 Msa0673470:intron 40.0%
! TATGAAAACTGCAAGTTGGG+TGG + chr4_4:19796605-19796624 Msa0673470:intron 40.0%
! ATGAAAACTGCAAGTTGGGT+GGG + chr4_4:19796606-19796625 Msa0673470:intron 40.0%
GATTGAGTCAAAGTTGAAGG+AGG + chr4_4:19797582-19797601 Msa0673470:intron 40.0%
!! AGAACTAAGGAAGCATCTTG+AGG + chr4_4:19797708-19797727 Msa0673470:CDS 40.0%
AGCGCTACAAGATCATAGAA+TGG - chr4_4:19797776-19797795 None:intergenic 40.0%
! CACTTTTCCCATTGCCTGTA+CGG - chr4_4:19788714-19788733 None:intergenic 45.0%
!!! GGAAACAGGTTTTTAGGTCG+AGG + chr4_4:19788755-19788774 Msa0673470:intron 45.0%
TTCACAAGAGGAAGTGACAC+CGG - chr4_4:19788791-19788810 None:intergenic 45.0%
AGCAGCATGCATTTCACAAG+AGG - chr4_4:19788803-19788822 None:intergenic 45.0%
!!! AGCGGTGTCTGTGTTGTTTT+TGG + chr4_4:19788943-19788962 Msa0673470:intron 45.0%
CGGACACCAAAAACGAAATG+GGG - chr4_4:19789072-19789091 None:intergenic 45.0%
CACGGACACCAAAAACGAAA+TGG - chr4_4:19789074-19789093 None:intergenic 45.0%
ACAAAACACAGACACGGACA+CGG - chr4_4:19789092-19789111 None:intergenic 45.0%
! TGTCCGTGTCTGTGTTTTGT+AGG + chr4_4:19789092-19789111 Msa0673470:intron 45.0%
GCTCATGATAAGTTGTCCCT+CGG - chr4_4:19789159-19789178 None:intergenic 45.0%
! GGGTCTTTAAGGAATGCGAA+TGG - chr4_4:19789185-19789204 None:intergenic 45.0%
!! CAAGTGCATTGACTTTGCCA+AGG + chr4_4:19789521-19789540 Msa0673470:CDS 45.0%
!! TGCATTGACTTTGCCAAGGA+TGG + chr4_4:19789525-19789544 Msa0673470:CDS 45.0%
ATAACACCACAAGGATGGCA+TGG - chr4_4:19789554-19789573 None:intergenic 45.0%
GACAGATAACACCACAAGGA+TGG - chr4_4:19789559-19789578 None:intergenic 45.0%
TCAATCCAAACACACCCTGA+AGG - chr4_4:19790056-19790075 None:intergenic 45.0%
TTCAGGGTGTGTTTGGATTG+AGG + chr4_4:19790055-19790074 Msa0673470:intron 45.0%
TCAGGGTGTGTTTGGATTGA+GGG + chr4_4:19790056-19790075 Msa0673470:intron 45.0%
GTTTGGATTGAGGGTTTAGG+AGG + chr4_4:19790065-19790084 Msa0673470:intron 45.0%
TTGGATTGAGGGTTTAGGAG+GGG + chr4_4:19790067-19790086 Msa0673470:intron 45.0%
GGATTTAGAAGGAGAGAGGA+GGG - chr4_4:19790266-19790285 None:intergenic 45.0%
AGGATTTAGAAGGAGAGAGG+AGG - chr4_4:19790267-19790286 None:intergenic 45.0%
! AGATCGCTTCTTTTCGTCCT+TGG - chr4_4:19790410-19790429 None:intergenic 45.0%
AAGGACGAAAAGAAGCGATC+TGG + chr4_4:19790409-19790428 Msa0673470:CDS 45.0%
GCATATGCAGCAAACATACG+AGG + chr4_4:19790695-19790714 Msa0673470:CDS 45.0%
TGGACCTATGACCCATGAAA+TGG - chr4_4:19791081-19791100 None:intergenic 45.0%
TTCATGGGTCATAGGTCCAA+TGG + chr4_4:19791082-19791101 Msa0673470:intron 45.0%
!! TTGGGGTTATCGTGTTGCTT+GGG + chr4_4:19791339-19791358 Msa0673470:intron 45.0%
ACACCGACACTTCTGATCAA+AGG + chr4_4:19791603-19791622 Msa0673470:intron 45.0%
! ACGCCTTTGATCAGAAGTGT+CGG - chr4_4:19791609-19791628 None:intergenic 45.0%
ATTTGTAACGGCCGCAATCT+CGG - chr4_4:19791727-19791746 None:intergenic 45.0%
TGCGGCCGTTACAAATGTAT+CGG + chr4_4:19791731-19791750 Msa0673470:intron 45.0%
GGCTGCCGATACATTTGTAA+CGG - chr4_4:19791739-19791758 None:intergenic 45.0%
AGTCTGAACGGAGTTCGTAA+CGG - chr4_4:19791842-19791861 None:intergenic 45.0%
GTGCGCATACATGTGTGTAT+TGG - chr4_4:19792171-19792190 None:intergenic 45.0%
CTGCTTCTAAATAACGGTCG+CGG - chr4_4:19792647-19792666 None:intergenic 45.0%
GTTGTGTCAGTGTAGGACAA+TGG - chr4_4:19792828-19792847 None:intergenic 45.0%
TAAAGGCTCTTAAGCACGGA+TGG - chr4_4:19792917-19792936 None:intergenic 45.0%
TTCACAAGAGGAAGTGACAC+CGG - chr4_4:19788791-19788810 None:intergenic 45.0%
! ACGAAGCACTAACACAAACG+CGG - chr4_4:19793470-19793489 None:intergenic 45.0%
CGTTTGTGTTAGTGCTTCGT+AGG + chr4_4:19793470-19793489 Msa0673470:intron 45.0%
!!! GGGTTTTGAAGGAATGGGAA+TGG - chr4_4:19793694-19793713 None:intergenic 45.0%
GTCATGTGACTGAAAGGTCA+TGG + chr4_4:19794027-19794046 Msa0673470:intron 45.0%
! CCATAGGTGTTACGTGTTTC+AGG - chr4_4:19794211-19794230 None:intergenic 45.0%
CCTGAAACACGTAACACCTA+TGG + chr4_4:19794208-19794227 Msa0673470:intron 45.0%
CATGGCAAAGTCAATGCACT+TGG - chr4_4:19794382-19794401 None:intergenic 45.0%
!! CAAGTGCATTGACTTTGCCA+TGG + chr4_4:19789521-19789540 Msa0673470:CDS 45.0%
!! TGCATTGACTTTGCCATGGA+TGG + chr4_4:19794384-19794403 Msa0673470:CDS 45.0%
ATAACACCACAAGGATGGCA+TGG - chr4_4:19789554-19789573 None:intergenic 45.0%
CGCAGCTTGCAGACATTATT+TGG + chr4_4:19794474-19794493 Msa0673470:CDS 45.0%
TAGCGAATCCTCTCTTTGTG+TGG + chr4_4:19795303-19795322 Msa0673470:intron 45.0%
AGCGAATCCTCTCTTTGTGT+GGG + chr4_4:19795304-19795323 Msa0673470:intron 45.0%
AACGATTCCCACACAAAGAG+AGG - chr4_4:19790366-19790385 None:intergenic 45.0%
AAGGACGAAAAGAAGCGATC+TGG + chr4_4:19790409-19790428 Msa0673470:CDS 45.0%
GGAGCAATGAAACTGCATAG+CGG + chr4_4:19795560-19795579 Msa0673470:CDS 45.0%
GAGCAATGAAACTGCATAGC+GGG + chr4_4:19795561-19795580 Msa0673470:CDS 45.0%
!! TATGGAGGGTATCTTCCACA+AGG + chr4_4:19796161-19796180 Msa0673470:intron 45.0%
! TCAAAGGTTCTGACTCCTAC+AGG - chr4_4:19796225-19796244 None:intergenic 45.0%
TTCCCCTACCTAGCTATCAA+AGG - chr4_4:19796241-19796260 None:intergenic 45.0%
! TGAAAACTGCAAGTTGGGTG+GGG + chr4_4:19796607-19796626 Msa0673470:intron 45.0%
AGTTGAAGGAGGCAACTACA+AGG + chr4_4:19797593-19797612 Msa0673470:CDS 45.0%
AGCAGAAGACACTGCAAAGT+TGG + chr4_4:19797657-19797676 Msa0673470:CDS 45.0%
!! ACTAAGGAAGCATCTTGAGG+AGG + chr4_4:19797711-19797730 Msa0673470:CDS 45.0%
!!! AATTATTAATTTTTCTTTAA+GGG - chr4_4:19790303-19790322 None:intergenic 5.0%
!!! AAATTATTAATTTTTCTTTA+AGG - chr4_4:19790304-19790323 None:intergenic 5.0%
!! TTAAAATAAAATAAAAACTA+CGG - chr4_4:19793408-19793427 None:intergenic 5.0%
!!! TAAATTTTTTTTTTTTTGTA+GGG + chr4_4:19797115-19797134 Msa0673470:intron 5.0%
GATTGGGAGTTAGCGTCATC+CGG + chr4_4:19788631-19788650 Msa0673470:CDS 50.0%
AGCTAATGAAGCTCGGACAG+TGG + chr4_4:19788678-19788697 Msa0673470:CDS 50.0%
! TGAAGCTCGGACAGTGGTTT+TGG + chr4_4:19788684-19788703 Msa0673470:intron 50.0%
! GGCAATGGGAAAAGTGCAAC+CGG + chr4_4:19788718-19788737 Msa0673470:intron 50.0%
! CATGCTGCTGAGTTGAGTGA+TGG + chr4_4:19788814-19788833 Msa0673470:CDS 50.0%
GATGGCATGGATACCATCCT+TGG - chr4_4:19789541-19789560 None:intergenic 50.0%
TGGTATCCATGCCATCCTTG+TGG + chr4_4:19789545-19789564 Msa0673470:CDS 50.0%
TGTCAGATCACGGTTTAGCG+AGG + chr4_4:19789575-19789594 Msa0673470:intron 50.0%
!! GGGGATGGACTAGAAGATGA+TGG + chr4_4:19789678-19789697 Msa0673470:CDS 50.0%
AGTCTATCTGCTGGACCTTC+AGG + chr4_4:19790038-19790057 Msa0673470:intron 50.0%
GTCTATCTGCTGGACCTTCA+GGG + chr4_4:19790039-19790058 Msa0673470:intron 50.0%
ATTGAGGGTTTAGGAGGGGA+AGG + chr4_4:19790071-19790090 Msa0673470:intron 50.0%
GGAGCAATGGAACTGCATAG+CGG + chr4_4:19790612-19790631 Msa0673470:CDS 50.0%
GAGCAATGGAACTGCATAGC+GGG + chr4_4:19790613-19790632 Msa0673470:CDS 50.0%
AACACGATAACCCCAACGAC+TGG - chr4_4:19791335-19791354 None:intergenic 50.0%
! GTTGGGGTTATCGTGTTGCT+TGG + chr4_4:19791338-19791357 Msa0673470:intron 50.0%
! GTTCACTGCGCGTACTTTTC+AGG + chr4_4:19791387-19791406 Msa0673470:intron 50.0%
ACGAACCTGTACCGAGATTG+CGG + chr4_4:19791713-19791732 Msa0673470:intron 50.0%
CAAATCGCAAGCAGGAAGGA+AGG - chr4_4:19792037-19792056 None:intergenic 50.0%
ATCGCAAATCGCAAGCAGGA+AGG - chr4_4:19792041-19792060 None:intergenic 50.0%
CAGAATCGCAAATCGCAAGC+AGG - chr4_4:19792045-19792064 None:intergenic 50.0%
CTGCTTGCGATTTGCGATTC+TGG + chr4_4:19792043-19792062 Msa0673470:intron 50.0%
CGCTAAGGTTGTCGCGATTT+CGG - chr4_4:19792621-19792640 None:intergenic 50.0%
ATGGAGACATGGACACGACA+CGG - chr4_4:19792898-19792917 None:intergenic 50.0%
CTTAAGCACGGATGGAGACA+TGG - chr4_4:19792909-19792928 None:intergenic 50.0%
AGCTAATGAAGCTCGGACAG+TGG + chr4_4:19788678-19788697 Msa0673470:CDS 50.0%
! TGAAGCTCGGACAGTGGTTT+TGG + chr4_4:19788684-19788703 Msa0673470:intron 50.0%
!!! GTGGTTTTGGTTGGACGTAC+TGG + chr4_4:19793192-19793211 Msa0673470:CDS 50.0%
! TTGGTTGGACGTACTGGCAA+TGG + chr4_4:19793198-19793217 Msa0673470:CDS 50.0%
! TGGTTGGACGTACTGGCAAT+GGG + chr4_4:19793199-19793218 Msa0673470:CDS 50.0%
! CAGACTGCTGAGTTGAGTGA+TGG + chr4_4:19793309-19793328 Msa0673470:CDS 50.0%
! CAAAGGAGAGGTTGGGTTGT+TGG + chr4_4:19793805-19793824 Msa0673470:intron 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr4_4:19794005-19794024 None:intergenic 50.0%
AAGGTCATGGGTTCAAGTGC+TGG + chr4_4:19794040-19794059 Msa0673470:intron 50.0%
GATGGCATGGATACCATCCA+TGG - chr4_4:19794400-19794419 None:intergenic 50.0%
TGGTATCCATGCCATCCTTG+TGG + chr4_4:19789545-19789564 Msa0673470:CDS 50.0%
ATGATTGTGGTCTTCACGGG+AGG + chr4_4:19794516-19794535 Msa0673470:CDS 50.0%
TGATTGTGGTCTTCACGGGA+GGG + chr4_4:19794517-19794536 Msa0673470:CDS 50.0%
ACAGCACACACGCCCAAAAA+TGG - chr4_4:19796096-19796115 None:intergenic 50.0%
CTTTGGGCTGAGATGGTAAG+AGG + chr4_4:19796473-19796492 Msa0673470:intron 50.0%
! GAAAACTGCAAGTTGGGTGG+GGG + chr4_4:19796608-19796627 Msa0673470:intron 50.0%
CATGAAGAACTCTGCAAGCG+AGG + chr4_4:19797736-19797755 Msa0673470:CDS 50.0%
!!! GCTCGGACAGTGGTTTTGGT+TGG + chr4_4:19788688-19788707 Msa0673470:intron 55.0%
!!! GTGGTTTTGGTTGGCCGTAC+AGG + chr4_4:19788697-19788716 Msa0673470:intron 55.0%
! TTGGTTGGCCGTACAGGCAA+TGG + chr4_4:19788703-19788722 Msa0673470:intron 55.0%
! TGGTTGGCCGTACAGGCAAT+GGG + chr4_4:19788704-19788723 Msa0673470:intron 55.0%
ATGATCGTGGTCTTCACGGG+AGG + chr4_4:19789657-19789676 Msa0673470:CDS 55.0%
TGATCGTGGTCTTCACGGGA+GGG + chr4_4:19789658-19789677 Msa0673470:CDS 55.0%
CTGGACCTTCAGGGTGTGTT+TGG + chr4_4:19790048-19790067 Msa0673470:intron 55.0%
AGGGTTTAGGAGGGGAAGGA+AGG + chr4_4:19790075-19790094 Msa0673470:intron 55.0%
GGGTTTAGGAGGGGAAGGAA+GGG + chr4_4:19790076-19790095 Msa0673470:intron 55.0%
GGTTTAGGAGGGGAAGGAAG+GGG + chr4_4:19790077-19790096 Msa0673470:intron 55.0%
AGGTCCAAAAACGGTCACGG+TGG - chr4_4:19791760-19791779 None:intergenic 55.0%
ACGGTGTTTCGCAGCCGTAA+CGG - chr4_4:19791823-19791842 None:intergenic 55.0%
AAGGTTGTCGCGATTTCGGC+CGG - chr4_4:19792617-19792636 None:intergenic 55.0%
GATTGGGAATTGGCGTCAGC+TGG + chr4_4:19793126-19793145 Msa0673470:intron 55.0%
!!! GCTCGGACAGTGGTTTTGGT+TGG + chr4_4:19788688-19788707 Msa0673470:intron 55.0%
! GGCAATGGGAAGAGTGCAAC+CGG + chr4_4:19793213-19793232 Msa0673470:CDS 55.0%
!! AAGTCTAGGGCTAGCTCGTC+CGG + chr4_4:19793264-19793283 Msa0673470:CDS 55.0%
GGAAGGGGTCCCACCATATT+TGG - chr4_4:19794111-19794130 None:intergenic 55.0%
! AATATGGTGGGACCCCTTCC+CGG + chr4_4:19794111-19794130 Msa0673470:intron 55.0%
CTAAAGCTCCCGCATACGCA+GGG - chr4_4:19794138-19794157 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG - chr4_4:19794139-19794158 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG + chr4_4:19794143-19794162 Msa0673470:intron 55.0%
GATTGTGGTCTTCACGGGAG+GGG + chr4_4:19794518-19794537 Msa0673470:CDS 55.0%
CAGCTGTAAGCCCTCTTAGC+AGG + chr4_4:19797352-19797371 Msa0673470:intron 55.0%
GGAGGCAACTACAAGGCTTG+AGG + chr4_4:19797600-19797619 Msa0673470:CDS 55.0%
GAAGAACTCTGCAAGCGAGG+TGG + chr4_4:19797739-19797758 Msa0673470:CDS 55.0%
GATCGTGGTCTTCACGGGAG+GGG + chr4_4:19789659-19789678 Msa0673470:CDS 60.0%
TTAGGAGGGGAAGGAAGGGG+AGG + chr4_4:19790080-19790099 Msa0673470:intron 60.0%
TAGGAGGGGAAGGAAGGGGA+GGG + chr4_4:19790081-19790100 Msa0673470:intron 60.0%
AACGGCCGCAATCTCGGTAC+AGG - chr4_4:19791721-19791740 None:intergenic 60.0%
! GCAGCCACCGTGACCGTTTT+TGG + chr4_4:19791753-19791772 Msa0673470:intron 60.0%
GTCAGCTGGATCAGCTAGCG+AGG + chr4_4:19793140-19793159 Msa0673470:intron 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + chr4_4:19793994-19794013 Msa0673470:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG + chr4_4:19794144-19794163 Msa0673470:intron 60.0%
! GGAGCTTTAGTGCACCGGGT+TGG + chr4_4:19794148-19794167 Msa0673470:intron 60.0%
TGGTCTTCACGGGAGGGGAT+GGG + chr4_4:19789664-19789683 Msa0673470:CDS 60.0%
! ACTGCAAGTTGGGTGGGGGA+AGG + chr4_4:19796612-19796631 Msa0673470:intron 60.0%
ACTCTGCAAGCGAGGTGGCA+AGG + chr4_4:19797744-19797763 Msa0673470:CDS 60.0%
CTCTGCAAGCGAGGTGGCAA+GGG + chr4_4:19797745-19797764 Msa0673470:CDS 60.0%
!! AGGTCGAGGGCTAGCTCGTC+CGG + chr4_4:19788769-19788788 Msa0673470:CDS 65.0%
GTGGTCTTCACGGGAGGGGA+TGG + chr4_4:19789663-19789682 Msa0673470:CDS 65.0%
GCGGCTACGTGTCAGCAGCA+AGG + chr4_4:19791681-19791700 Msa0673470:intron 65.0%
TAACGGTCGCGGTCGCGCTA+AGG - chr4_4:19792636-19792655 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG - chr4_4:19794126-19794145 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG - chr4_4:19794127-19794146 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG + chr4_4:19794126-19794145 Msa0673470:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG + chr4_4:19794127-19794146 Msa0673470:intron 65.0%
GTGGTCTTCACGGGAGGGGA+TGG + chr4_4:19789663-19789682 Msa0673470:CDS 65.0%
CGCATACGCAGGGTCCGGGA+AGG - chr4_4:19794128-19794147 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG - chr4_4:19794132-19794151 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG - chr4_4:19794133-19794152 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 19788607 19797942 19788607 ID=Msa0673470;Name=Msa0673470
chr4_4 mRNA 19788607 19797942 19788607 ID=Msa0673470-mRNA-1;Parent=Msa0673470;Name=Msa0673470-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.4|0.27|1|0.5|0.36|11|159|551
chr4_4 exon 19788607 19788699 19788607 ID=Msa0673470-mRNA-1:exon:5730;Parent=Msa0673470-mRNA-1
chr4_4 exon 19788763 19788865 19788763 ID=Msa0673470-mRNA-1:exon:5731;Parent=Msa0673470-mRNA-1
chr4_4 exon 19789472 19789586 19789472 ID=Msa0673470-mRNA-1:exon:5732;Parent=Msa0673470-mRNA-1
chr4_4 exon 19789593 19789749 19789593 ID=Msa0673470-mRNA-1:exon:5733;Parent=Msa0673470-mRNA-1
chr4_4 exon 19790406 19790528 19790406 ID=Msa0673470-mRNA-1:exon:5734;Parent=Msa0673470-mRNA-1
chr4_4 exon 19790609 19790743 19790609 ID=Msa0673470-mRNA-1:exon:5735;Parent=Msa0673470-mRNA-1
chr4_4 exon 19793168 19793360 19793168 ID=Msa0673470-mRNA-1:exon:5736;Parent=Msa0673470-mRNA-1
chr4_4 exon 19794373 19794608 19794373 ID=Msa0673470-mRNA-1:exon:5737;Parent=Msa0673470-mRNA-1
chr4_4 exon 19795306 19795470 19795306 ID=Msa0673470-mRNA-1:exon:5738;Parent=Msa0673470-mRNA-1
chr4_4 exon 19795557 19795691 19795557 ID=Msa0673470-mRNA-1:exon:5739;Parent=Msa0673470-mRNA-1
chr4_4 exon 19797583 19797942 19797583 ID=Msa0673470-mRNA-1:exon:5740;Parent=Msa0673470-mRNA-1
chr4_4 CDS 19788607 19788699 19788607 ID=Msa0673470-mRNA-1:cds;Parent=Msa0673470-mRNA-1
chr4_4 CDS 19788763 19788865 19788763 ID=Msa0673470-mRNA-1:cds;Parent=Msa0673470-mRNA-1
chr4_4 CDS 19789472 19789586 19789472 ID=Msa0673470-mRNA-1:cds;Parent=Msa0673470-mRNA-1
chr4_4 CDS 19789593 19789749 19789593 ID=Msa0673470-mRNA-1:cds;Parent=Msa0673470-mRNA-1
chr4_4 CDS 19790406 19790528 19790406 ID=Msa0673470-mRNA-1:cds;Parent=Msa0673470-mRNA-1
chr4_4 CDS 19790609 19790743 19790609 ID=Msa0673470-mRNA-1:cds;Parent=Msa0673470-mRNA-1
chr4_4 CDS 19793168 19793360 19793168 ID=Msa0673470-mRNA-1:cds;Parent=Msa0673470-mRNA-1
chr4_4 CDS 19794373 19794608 19794373 ID=Msa0673470-mRNA-1:cds;Parent=Msa0673470-mRNA-1
chr4_4 CDS 19795306 19795470 19795306 ID=Msa0673470-mRNA-1:cds;Parent=Msa0673470-mRNA-1
chr4_4 CDS 19795557 19795691 19795557 ID=Msa0673470-mRNA-1:cds;Parent=Msa0673470-mRNA-1
chr4_4 CDS 19797583 19797783 19797583 ID=Msa0673470-mRNA-1:cds;Parent=Msa0673470-mRNA-1
chr4_4 three_prime_UTR 19797784 19797942 19797784 ID=Msa0673470-mRNA-1:three_prime_utr;Parent=Msa0673470-mRNA-1
Gene Sequence

>Msa0673470

ATGGGGGGAAGTTATGTTGAAGATGATTGGGAGTTAGCGTCATCCGGATCAGCTAATGATGTTCATATTTCAGCTAATGAAGCTCGGACAGTGGTTTTTAGGTCGAGGGCTAGCTCGTCCGGTGTCACTTCCTCTTGTGAAATGCATGCTGCTGAGTTGAGTGATGGACAGATTGTCAATGTTATTGACACTCCAGGATTATTTGAAGTTTCTGCTGGATCTGAGTTTATTGGGAAAGAAATAGTCAAGTGCATTGACTTTGCCAAGGATGGTATCCATGCCATCCTTGTGGTGTTATCTGTCAGATCACGCGAGGAAGAAGAAAATGCTCTGTGCAGCTTGCAGACATTATTTGGAAGCAAGATTGTTGACTATATGATCGTGGTCTTCACGGGAGGGGATGGACTAGAAGATGATGGAGATACACTTGCCGATTATTTAGGCGGTGAATGTCCAGAGTCTTTGAAGACCAAGGACGAAAAGAAGCGATCTGGACAAGTTCAACAACTTCTCTCGTGTGTAAGCTTGATAGTATCACAGAATGGTGGGAAACCCTATACACATGAGTTATTTGCAGAACTAAAGGTGGAGAAAGGAGCAATGGAACTGCATAGCGGGCGAAGAAAGATTGATTCCTTGGAAGGACATTCAAAAGAACAAATATCAGAGCTTAAAAAGCATATGCAGCAAACATACGAGGAGCAGCTAAAACATATTACTGAGACGATTTCAGCTAATGAAGCTCGGACAGTGGTTTTGGTTGGACGTACTGGCAATGGGAAGAGTGCAACCGGTAATAGTATTCTTGGGAAAAAGGTCTTTAAGTCTAGGGCTAGCTCGTCCGGTGTCACTTCCTCTTGTGAAATGCAGACTGCTGAGTTGAGTGATGGACAAATTGTCAATGTTATTGACACTCCAGAAATAGCCAAGTGCATTGACTTTGCCATGGATGGTATCCATGCCATCCTTGTGGTGTTATCTGTTAGATCACGATTTAGTGAGGAAGAAGAAAATGCTCTACGCAGCTTGCAGACATTATTTGGAAGCAAGATTGTTGACTATATGATTGTGGTCTTCACGGGAGGGGATGGGTTAGAAGACGATGAAGATACACTTGACGACTATTTAGGTCGTGAATGTCCAGAATCTTTGAAGCGAATCCTCTCTTTGTGTGGGAATCGTTGTGTTCTCTTTGACAACAAGACTAAGGACGAAAAGAAGCGATCTGGACAAGTTCAACAACTTCTCTCGTTTGTAAACTTGATAGTATCACAGAATGGCGGGCAACCTTATACAGATGAGTTATTTGCAAAACTAAAGAAAGGAGCAATGAAACTGCATAGCGGGCAAAGAAAGATTGATTCCTTGGAAGAACATTCAAAAGAAGAAATATCAGAGCTTAAAAAGCATATGCAGCAAACATATGAGGAGCAGCTAAAACATATTACTGAGATGATTGAGTCAAAGTTGAAGGAGGCAACTACAAGGCTTGAGGAACAACTGAAAGAAGAGCAAGCTGCAAGATTAAAAGCAGAAGACACTGCAAAGTTGGCTCAAGAGAAATCAAACGATGAAATACGAGAACTAAGGAAGCATCTTGAGGAGGCGCATGAAGAACTCTGCAAGCGAGGTGGCAAGGGTTGTACCATTCTATGA
Protein sequence

>Msa0673470

MGGSYVEDDWELASSGSANDVHISANEARTVVFRSRASSSGVTSSCEMHAAELSDGQIVNVIDTPGLFEVSAGSEFIGKEIVKCIDFAKDGIHAILVVLSVRSREEEENALCSLQTLFGSKIVDYMIVVFTGGDGLEDDGDTLADYLGGECPESLKTKDEKKRSGQVQQLLSCVSLIVSQNGGKPYTHELFAELKVEKGAMELHSGRRKIDSLEGHSKEQISELKKHMQQTYEEQLKHITETISANEARTVVLVGRTGNGKSATGNSILGKKVFKSRASSSGVTSSCEMQTAELSDGQIVNVIDTPEIAKCIDFAMDGIHAILVVLSVRSRFSEEEENALRSLQTLFGSKIVDYMIVVFTGGDGLEDDEDTLDDYLGRECPESLKRILSLCGNRCVLFDNKTKDEKKRSGQVQQLLSFVNLIVSQNGGQPYTDELFAKLKKGAMKLHSGQRKIDSLEEHSKEEISELKKHMQQTYEEQLKHITEMIESKLKEATTRLEEQLKEEQAARLKAEDTAKLAQEKSNDEIRELRKHLEEAHEELCKRGGKGCTIL*