AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0141140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0141140 MtrunA17_Chr3g0126021 96.567 466 16 0 1 466 1 466 0.0 931
Msa0141140 MtrunA17_Chr8g0384151 53.202 406 172 2 59 464 34 421 3.46e-155 447
Msa0141140 MtrunA17_Chr7g0259711 45.352 355 175 5 127 466 89 439 1.52e-107 326
Msa0141140 MtrunA17_Chr2g0287901 41.962 367 193 6 109 461 79 439 3.24e-98 302
Msa0141140 MtrunA17_Chr7g0269991 42.941 340 182 5 129 462 137 470 1.41e-97 301
Msa0141140 MtrunA17_Chr4g0068111 42.029 345 185 4 128 460 113 454 1.47e-92 288
Msa0141140 MtrunA17_Chr1g0213281 35.990 389 210 7 87 460 152 516 1.02e-86 275
Msa0141140 MtrunA17_Chr7g0258851 39.353 371 185 9 116 463 238 591 1.39e-84 271
Msa0141140 MtrunA17_Chr1g0175671 38.095 399 216 7 89 462 120 512 1.62e-84 269
Msa0141140 MtrunA17_Chr4g0071391 36.288 361 207 7 112 460 98 447 7.55e-83 263
Msa0141140 MtrunA17_Chr5g0413271 37.500 376 202 9 102 461 120 478 5.33e-81 259
Msa0141140 MtrunA17_Chr8g0368461 38.606 373 193 10 117 461 166 530 1.22e-79 257
Msa0141140 MtrunA17_Chr2g0314791 39.130 345 178 10 126 461 26 347 7.68e-76 241
Msa0141140 MtrunA17_Chr5g0413851 37.047 359 197 10 111 461 24 361 2.14e-72 233
Msa0141140 MtrunA17_Chr3g0105301 36.011 361 188 9 123 460 37 377 1.80e-71 231
Msa0141140 MtrunA17_Chr2g0283581 38.261 345 187 9 121 459 34 358 2.60e-70 227
Msa0141140 MtrunA17_Chr5g0430371 34.127 378 202 9 112 460 41 400 1.40e-69 226
Msa0141140 MtrunA17_Chr1g0178081 35.942 345 159 9 127 462 53 344 1.47e-69 225
Msa0141140 MtrunA17_Chr3g0097891 34.916 358 208 7 110 460 12 351 3.22e-69 224
Msa0141140 MtrunA17_Chr3g0085081 34.783 345 184 8 127 457 29 346 1.35e-68 222
Msa0141140 MtrunA17_Chr4g0041011 37.609 343 189 8 122 459 41 363 1.65e-68 223
Msa0141140 MtrunA17_Chr4g0045941 38.462 338 183 8 129 460 33 351 1.66e-68 222
Msa0141140 MtrunA17_Chr3g0091031 34.203 345 186 8 127 457 29 346 1.98e-68 222
Msa0141140 MtrunA17_Chr4g0006991 34.270 356 199 8 127 459 84 427 2.25e-68 224
Msa0141140 MtrunA17_Chr3g0085071 35.207 338 192 8 127 457 44 361 2.53e-68 222
Msa0141140 MtrunA17_Chr4g0045951 37.870 338 185 7 129 460 45 363 3.61e-68 222
Msa0141140 MtrunA17_Chr2g0314801 38.719 359 190 10 111 459 15 353 7.11e-68 221
Msa0141140 MtrunA17_Chr4g0005491 31.351 370 221 7 117 462 50 410 6.16e-64 212
Msa0141140 MtrunA17_Chr1g0171171 34.783 345 197 7 125 459 49 375 3.16e-62 206
Msa0141140 MtrunA17_Chr2g0325481 36.202 337 191 7 129 460 50 367 1.94e-61 204
Msa0141140 MtrunA17_Chr1g0210771 34.667 375 205 9 103 459 30 382 1.98e-61 204
Msa0141140 MtrunA17_Chr8g0360521 32.249 369 210 9 117 461 59 411 2.30e-61 206
Msa0141140 MtrunA17_Chr7g0242701 33.795 361 194 9 127 459 84 427 6.25e-60 202
Msa0141140 MtrunA17_Chr3g0113671 30.790 367 207 7 124 460 101 450 1.75e-58 199
Msa0141140 MtrunA17_Chr7g0243301 30.749 374 215 10 121 462 51 412 2.10e-58 197
Msa0141140 MtrunA17_Chr4g0005481 31.476 359 208 9 124 459 103 446 4.82e-58 197
Msa0141140 MtrunA17_Chr5g0437291 30.000 360 216 8 129 462 165 514 1.72e-55 192
Msa0141140 MtrunA17_Chr3g0114101 30.878 353 213 8 129 460 89 431 1.07e-54 188
Msa0141140 MtrunA17_Chr5g0437601 30.447 358 216 8 125 460 79 425 6.36e-54 186
Msa0141140 MtrunA17_Chr1g0209921 38.306 248 130 8 124 368 39 266 1.64e-51 175
Msa0141140 MtrunA17_Chr6g0476041 29.491 373 198 12 128 459 166 514 7.57e-43 158
Msa0141140 MtrunA17_Chr5g0414051 28.814 413 236 16 85 463 36 424 4.19e-39 146
Msa0141140 MtrunA17_Chr4g0070341 30.141 355 211 13 128 459 131 471 1.11e-38 146
Msa0141140 MtrunA17_Chr8g0391481 29.155 367 203 14 129 459 27 372 5.06e-38 142
Msa0141140 MtrunA17_Chr5g0414091 30.000 370 199 13 128 459 84 431 1.50e-37 142
Msa0141140 MtrunA17_Chr5g0414061 28.169 426 254 14 71 464 38 443 1.75e-37 142
Msa0141140 MtrunA17_Chr7g0226991 28.533 375 197 13 128 459 56 402 5.90e-37 140
Msa0141140 MtrunA17_Chr1g0188191 29.570 372 211 15 128 465 233 587 6.17e-37 143
Msa0141140 MtrunA17_Chr3g0140371 29.551 379 212 16 115 459 3 360 1.90e-36 137
Msa0141140 MtrunA17_Chr4g0049421 27.596 366 211 14 129 460 48 393 4.22e-36 137
Msa0141140 MtrunA17_Chr8g0384421 27.451 357 238 10 118 459 122 472 5.96e-36 138
Msa0141140 MtrunA17_Chr2g0287931 47.967 123 64 0 193 315 2 124 2.59e-35 127
Msa0141140 MtrunA17_Chr6g0451321 26.282 468 280 16 48 466 13 464 6.21e-33 130
Msa0141140 MtrunA17_Chr8g0347321 27.072 362 218 12 129 460 95 440 4.10e-31 124
Msa0141140 MtrunA17_Chr6g0456691 26.923 364 223 11 123 459 72 419 7.04e-31 124
Msa0141140 MtrunA17_Chr5g0414041 29.670 364 208 14 128 459 86 433 4.12e-30 121
Msa0141140 MtrunA17_Chr6g0456681 27.441 379 224 12 115 461 50 409 1.31e-28 117
Msa0141140 MtrunA17_Chr6g0455901 26.087 368 231 14 120 459 62 416 3.73e-28 115
Msa0141140 MtrunA17_Chr8g0387921 25.867 375 209 16 129 461 74 421 1.12e-27 114
Msa0141140 MtrunA17_Chr2g0283851 26.431 367 228 13 124 462 50 402 3.68e-26 109
Msa0141140 MtrunA17_Chr7g0221291 38.384 99 57 1 123 221 73 167 2.40e-19 85.1
Msa0141140 MtrunA17_Chr7g0221271 29.448 163 96 2 59 221 24 167 9.59e-19 84.7
Msa0141140 MtrunA17_Chr2g0287911 45.000 60 22 2 129 188 61 109 1.21e-12 64.3
Msa0141140 MtrunA17_Chr1g0209931 40.278 72 42 1 390 460 22 93 1.00e-11 61.6
Msa0141140 MtrunA17_Chr3g0085101 30.952 126 60 4 336 447 6 118 1.50e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0141140 AT1G48880.1 57.000 400 150 4 63 462 65 442 1.39e-168 482
Msa0141140 AT3G06080.2 41.111 360 188 5 125 466 99 452 1.27e-95 296
Msa0141140 AT3G62390.1 40.960 354 194 5 118 462 127 474 2.90e-95 296
Msa0141140 AT5G19160.1 40.385 364 188 6 125 466 95 451 7.02e-94 292
Msa0141140 AT5G06230.2 41.787 347 187 7 128 460 20 365 1.10e-88 275
Msa0141140 AT5G06230.1 41.787 347 187 7 128 460 61 406 2.58e-88 276
Msa0141140 AT5G49340.1 41.143 350 183 8 128 460 99 442 4.21e-88 276
Msa0141140 AT3G11570.1 42.462 325 172 5 149 460 98 420 9.27e-88 275
Msa0141140 AT1G60790.1 38.504 361 204 6 121 466 182 539 1.43e-83 268
Msa0141140 AT3G12060.1 37.701 374 213 7 104 462 170 538 8.74e-83 266
Msa0141140 AT5G06700.1 38.904 365 198 7 112 462 244 597 1.08e-82 267
Msa0141140 AT5G20590.1 36.812 345 202 6 128 460 140 480 1.92e-82 263
Msa0141140 AT2G34070.1 37.931 348 192 7 118 459 54 383 5.97e-78 248
Msa0141140 AT5G19160.2 39.355 310 179 2 70 374 35 340 7.87e-78 246
Msa0141140 AT3G06080.1 46.939 245 126 1 125 369 99 339 1.13e-77 246
Msa0141140 AT1G29050.1 38.462 338 183 7 128 459 60 378 5.53e-75 240
Msa0141140 AT3G14850.2 37.101 345 191 8 125 461 30 356 4.01e-72 232
Msa0141140 AT5G06230.3 43.852 244 135 1 128 369 61 304 2.60e-68 221
Msa0141140 AT3G62390.2 40.449 267 153 3 118 384 127 387 4.40e-68 223
Msa0141140 AT1G78710.1 36.522 345 181 9 129 460 38 357 1.44e-67 220
Msa0141140 AT2G42570.1 34.153 366 212 7 100 460 24 365 8.53e-67 219
Msa0141140 AT5G58600.1 33.799 358 197 11 125 460 62 401 8.41e-66 217
Msa0141140 AT2G30010.1 33.247 385 211 11 104 460 31 397 6.99e-64 212
Msa0141140 AT2G30010.2 33.247 385 211 11 104 460 74 440 1.86e-63 212
Msa0141140 AT5G01360.2 32.123 358 205 10 127 459 34 378 3.46e-63 209
Msa0141140 AT2G30900.1 36.127 346 193 11 126 461 40 367 3.82e-63 209
Msa0141140 AT2G31110.2 34.985 343 200 7 122 459 38 362 4.02e-63 209
Msa0141140 AT1G73140.1 33.983 359 197 9 127 461 65 407 5.96e-63 210
Msa0141140 AT5G01360.1 32.123 358 205 10 127 459 90 434 7.69e-63 210
Msa0141140 AT3G54260.1 36.599 347 183 10 129 460 51 375 1.40e-61 205
Msa0141140 AT5G20590.2 38.430 242 145 2 128 369 140 377 2.80e-61 204
Msa0141140 AT5G01620.2 32.102 352 206 8 129 459 110 449 3.21e-59 201
Msa0141140 AT5G01620.1 32.102 352 206 8 129 459 110 449 3.21e-59 201
Msa0141140 AT5G01620.3 32.102 352 206 8 129 459 118 457 3.26e-59 201
Msa0141140 AT2G40160.2 28.706 425 260 12 71 463 14 427 3.96e-59 201
Msa0141140 AT2G40160.1 28.774 424 259 12 71 462 14 426 5.37e-59 200
Msa0141140 AT2G38320.1 28.954 411 246 8 73 460 18 405 2.21e-58 198
Msa0141140 AT2G40150.1 29.891 368 213 10 127 462 69 423 4.63e-55 189
Msa0141140 AT3G55990.1 28.230 418 239 10 94 462 81 486 1.31e-53 187
Msa0141140 AT2G40320.1 28.947 418 249 11 71 460 26 423 3.06e-53 184
Msa0141140 AT3G11030.1 30.790 367 200 9 127 460 104 449 3.74e-53 185
Msa0141140 AT5G58600.2 36.179 246 137 6 125 368 62 289 4.84e-50 172
Msa0141140 AT2G34070.2 36.502 263 147 6 203 459 1 249 7.58e-49 168
Msa0141140 AT2G38320.2 29.907 321 197 6 163 460 7 322 8.39e-49 170
Msa0141140 AT1G78710.2 33.033 333 156 10 129 460 31 297 1.78e-48 168
Msa0141140 AT2G30900.2 39.331 239 125 7 126 362 40 260 3.99e-47 164
Msa0141140 AT3G14850.1 36.330 267 148 7 203 461 1 253 1.40e-45 159
Msa0141140 AT2G31110.3 37.154 253 137 6 122 374 38 268 3.84e-45 159
Msa0141140 AT2G40160.3 30.744 309 191 9 71 368 14 310 4.71e-43 154
Msa0141140 AT1G70230.1 33.151 365 178 17 129 459 79 411 1.57e-42 155
Msa0141140 AT5G64470.3 30.601 366 214 14 120 460 45 395 2.75e-40 149
Msa0141140 AT4G25360.1 27.619 420 235 16 93 466 134 530 2.71e-39 149
Msa0141140 AT4G25360.2 27.619 420 235 16 93 466 134 530 2.71e-39 149
Msa0141140 AT5G64470.2 29.839 372 215 14 120 460 45 401 3.64e-38 144
Msa0141140 AT5G51640.1 30.871 379 207 18 118 459 128 488 1.12e-36 141
Msa0141140 AT1G01430.1 24.873 394 246 10 104 463 74 451 1.48e-35 137
Msa0141140 AT4G01080.1 27.851 377 219 13 118 463 80 434 5.02e-35 135
Msa0141140 AT4G11090.1 27.714 433 244 18 69 460 22 426 9.27e-35 135
Msa0141140 AT5G20680.6 29.330 358 222 16 122 459 111 457 1.45e-34 135
Msa0141140 AT5G64020.1 27.778 360 223 12 129 459 57 408 1.91e-34 133
Msa0141140 AT5G20680.2 29.526 359 220 17 122 459 187 533 3.59e-34 135
Msa0141140 AT5G20680.4 29.526 359 220 17 122 459 205 551 4.00e-34 135
Msa0141140 AT5G20680.1 29.526 359 220 17 122 459 205 551 4.00e-34 135
Msa0141140 AT5G20680.3 29.526 359 220 17 122 459 205 551 4.00e-34 135
Msa0141140 AT5G20680.5 29.526 359 220 17 122 459 205 551 4.00e-34 135
Msa0141140 AT5G15890.1 29.379 354 209 14 129 459 187 522 4.15e-34 134
Msa0141140 AT3G02440.2 29.040 396 221 14 103 463 110 480 9.41e-34 133
Msa0141140 AT3G02440.1 29.040 396 221 14 103 463 102 472 1.12e-33 132
Msa0141140 AT2G37720.1 27.324 355 221 12 128 459 142 482 2.04e-33 132
Msa0141140 AT2G14530.1 29.006 362 209 14 129 459 62 406 1.65e-32 128
Msa0141140 AT2G31110.1 33.491 212 129 4 253 459 10 214 3.46e-30 117
Msa0141140 AT4G23790.1 28.912 377 218 15 118 460 68 428 3.52e-30 122
Msa0141140 AT5G15900.1 27.297 381 231 15 114 464 50 414 1.04e-29 120
Msa0141140 AT5G15900.2 27.297 381 231 15 114 464 69 433 1.38e-29 120
Msa0141140 AT3G28150.1 27.933 358 218 14 129 461 70 412 4.24e-26 110
Msa0141140 AT5G64470.4 30.466 279 167 11 119 383 44 309 6.78e-25 105
Msa0141140 AT5G64470.1 30.466 279 167 11 119 383 44 309 9.48e-25 104

Find 113 sgRNAs with CRISPR-Local

Find 160 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACGAAGAGTTTACCATAAA+AGG 0.124043 1_3:-75882107 Msa0141140:three_prime_UTR
TTCACTACTAATGCAGTTAA+TGG 0.181263 1_3:-75884629 Msa0141140:exon
TGTTTAATATATATGGAAAT+TGG 0.191821 1_3:+75882353 None:intergenic
TGATGGGTATGTTCAGATTT+TGG 0.194299 1_3:-75884552 Msa0141140:CDS
TTCAATGTGTTAGTCAAAAC+TGG 0.225698 1_3:-75884433 Msa0141140:CDS
CTGCATTAGTAGTGAAAGTT+TGG 0.234926 1_3:+75884636 None:intergenic
AAGAGTTATGATGAGATTAA+TGG 0.256943 1_3:-75884337 Msa0141140:CDS
TAACATTTACATGAGTAATT+AGG 0.265477 1_3:-75882310 Msa0141140:three_prime_UTR
ATAAGATCACCAAACAAATT+AGG 0.268500 1_3:-75883910 Msa0141140:CDS
CTAGGAATATCACAGTTCTT+AGG 0.278013 1_3:+75884082 None:intergenic
TAACTCTTAATCACTGAATT+AGG 0.281414 1_3:+75884352 None:intergenic
GATGTTCTTATATTCAATTC+AGG 0.293943 1_3:-75883725 Msa0141140:CDS
ACCAAACAAATTAGGTTTCT+AGG 0.294028 1_3:-75883902 Msa0141140:CDS
CCTTCATGTTAGTACTTTCA+TGG 0.298021 1_3:-75884399 Msa0141140:CDS
ATGCTTGCAAAGTGACTAAA+AGG 0.302638 1_3:-75882687 Msa0141140:CDS
TAGCTAGTAATAATAAATTA+AGG 0.303162 1_3:-75882216 Msa0141140:three_prime_UTR
AAGATAGAGGTTATACAAAA+TGG 0.305284 1_3:-75884114 Msa0141140:CDS
AGAATTTCATTCCACATATC+AGG 0.307439 1_3:+75882469 None:intergenic
TAGTCACTTTGCAAGCATTA+TGG 0.311847 1_3:+75882692 None:intergenic
TATTCAATTAATACAGTTGA+TGG 0.331682 1_3:-75884569 Msa0141140:CDS
ACCTAGAAACCTAATTTGTT+TGG 0.335765 1_3:+75883901 None:intergenic
CTTTGCTCACCTGGGCATCT+TGG 0.341521 1_3:-75882949 Msa0141140:CDS
ACTCTTCGTTACAACACATT+TGG 0.352486 1_3:+75882120 None:intergenic
GTTTGATGGAAGTTGGATTC+AGG 0.354028 1_3:-75884227 Msa0141140:CDS
CATTGAGAAGCATCATATAA+AGG 0.356973 1_3:+75884181 None:intergenic
GTTGAACAATTATTTACAAT+AGG 0.357715 1_3:+75882073 None:intergenic
TCAAAACAGCTTTGCTCACC+TGG 0.358303 1_3:-75882958 Msa0141140:CDS
TTAAAACCTCTTTCTGCAAA+TGG 0.366665 1_3:+75884157 None:intergenic
TTTGCTCACCTGGGCATCTT+GGG 0.367494 1_3:-75882948 Msa0141140:CDS
TTGAACAATTATTTACAATA+GGG 0.376340 1_3:+75882074 None:intergenic
CAACAAGTCACATTCTCTTC+AGG 0.376823 1_3:+75882278 None:intergenic
CAATGTCCATTTGCAGAAAG+AGG 0.381573 1_3:-75884163 Msa0141140:CDS
TCACTACTAATGCAGTTAAT+GGG 0.392554 1_3:-75884628 Msa0141140:exon
GAAATGAAAACTTGTAAGAT+TGG 0.407461 1_3:+75884712 None:intergenic
CTTCATGTTAGTACTTTCAT+GGG 0.409110 1_3:-75884398 Msa0141140:CDS
GTAATGTGTTTGATGGAAGT+TGG 0.416256 1_3:-75884234 Msa0141140:CDS
CTAAGAACTGTGATATTCCT+AGG 0.417542 1_3:-75884081 Msa0141140:CDS
CATCTGAATCAACCCATTCA+TGG 0.430046 1_3:+75883744 None:intergenic
GGTGAAGACAACACTGAGAT+TGG 0.431850 1_3:-75883786 Msa0141140:CDS
TGCAGTCATTGGTGTTTACC+TGG 0.434332 1_3:-75882496 Msa0141140:CDS
TTATATTCAATTCAGGTCAC+TGG 0.436002 1_3:-75883718 Msa0141140:CDS
TGCCTAGATTTGCGCCGAAA+AGG 0.436178 1_3:-75883808 Msa0141140:CDS
CTGTACCTGATTGCAGTCAT+TGG 0.440386 1_3:-75882507 Msa0141140:CDS
CTCTAAAATCCAATGTTTCA+AGG 0.441697 1_3:-75884264 Msa0141140:CDS
AGGCCTTGGAAGAGAACTAT+AGG 0.446798 1_3:-75882667 Msa0141140:CDS
GATGCATGTAATGTGTTTGA+TGG 0.447224 1_3:-75884241 Msa0141140:CDS
ATTGAGAAGCATCATATAAA+GGG 0.448483 1_3:+75884182 None:intergenic
GCGAATGGGCGTAAAGATAG+AGG 0.453818 1_3:-75884127 Msa0141140:CDS
TAGATGATATTAGCCATGAA+TGG 0.454788 1_3:-75883757 Msa0141140:CDS
ACGAAGAGTTTACCATAAAA+GGG 0.461603 1_3:-75882106 Msa0141140:three_prime_UTR
GCAAAGTGACTAAAAGGCCT+TGG 0.463270 1_3:-75882681 Msa0141140:CDS
TGAAGGGTAATTGCAATGCT+TGG 0.470032 1_3:-75884468 Msa0141140:CDS
CTTTCGAATCATCGCATTGG+AGG 0.470520 1_3:-75882880 Msa0141140:intron
TCATATAATATATACAGTTA+TGG 0.471799 1_3:+75884690 None:intergenic
TGCATTAGTAGTGAAAGTTT+GGG 0.473945 1_3:+75884637 None:intergenic
GCCTAGATTTGCGCCGAAAA+GGG 0.475483 1_3:-75883807 Msa0141140:CDS
ACATGCATCCCTTGAAACAT+TGG 0.476011 1_3:+75884255 None:intergenic
ATTCATTGAGTAGGACTCAA+TGG 0.477060 1_3:-75884000 Msa0141140:CDS
TGATATATGGGATAGTAGGT+TGG 0.485045 1_3:-75884593 Msa0141140:CDS
ACATGTGATGTGTTAGTTAG+TGG 0.485251 1_3:-75882392 Msa0141140:three_prime_UTR
TGACGCCAATGGATGCATAT+AGG 0.485647 1_3:-75882567 Msa0141140:CDS
CATTTGGATACACTTTGAGC+TGG 0.495319 1_3:+75882136 None:intergenic
GTGATGGCCATGTGGGAACT+TGG 0.497057 1_3:-75882543 Msa0141140:CDS
CTTAATCACTGAATTAGGAG+TGG 0.505194 1_3:+75884357 None:intergenic
TTGCCTATAGTTCTCTTCCA+AGG 0.505458 1_3:+75882664 None:intergenic
AATGCGATGATTCGAAAGTT+CGG 0.509064 1_3:+75882885 None:intergenic
TACCTGGTGTTCCTGATATG+TGG 0.510262 1_3:-75882480 Msa0141140:CDS
TTATATGATTGTGATAACAT+AGG 0.512320 1_3:-75884675 Msa0141140:five_prime_UTR
GCAAATCTAGGCACCGAACC+AGG 0.516119 1_3:+75883818 None:intergenic
AGATGATATTAGCCATGAAT+GGG 0.516712 1_3:-75883756 Msa0141140:CDS
TTGTTGGTGATTCATTGAGT+AGG 0.521972 1_3:-75884009 Msa0141140:CDS
AAACACCAATGACTGCAATC+AGG 0.522147 1_3:+75882502 None:intergenic
GAACTTTCGAATCATCGCAT+TGG 0.522383 1_3:-75882883 Msa0141140:CDS
TTCATTGAGTAGGACTCAAT+GGG 0.525301 1_3:-75883999 Msa0141140:CDS
GTTGGTAGCTCACTGAAGCT+TGG 0.529154 1_3:-75883001 Msa0141140:CDS
ATTCAGGTCACTGGTGGACC+AGG 0.530375 1_3:-75883709 Msa0141140:CDS
TCTAAAATCCAATGTTTCAA+GGG 0.532501 1_3:-75884263 Msa0141140:CDS
AGTAGTGAAAGTTTGGGTGA+AGG 0.533945 1_3:+75884643 None:intergenic
GAGGTTATACAAAATGGAGA+TGG 0.534592 1_3:-75884108 Msa0141140:CDS
ATTCAATTAATACAGTTGAT+GGG 0.539782 1_3:-75884568 Msa0141140:CDS
CAAAACAGCTTTGCTCACCT+GGG 0.540720 1_3:-75882957 Msa0141140:CDS
TTTAGTCACAAAATTATGAA+GGG 0.543395 1_3:-75884484 Msa0141140:CDS
TATTCAATTCAGGTCACTGG+TGG 0.549775 1_3:-75883715 Msa0141140:CDS
CTAGCTAAAGACGAGGGAGC+AGG 0.563668 1_3:+75882232 None:intergenic
AAGAGTGTTTATGAAATCAA+AGG 0.567848 1_3:-75883935 Msa0141140:CDS
TCACTCCTATATGCATCCAT+TGG 0.572428 1_3:+75882562 None:intergenic
GTCACGTGCAGCACCGTCAC+AGG 0.572514 1_3:+75882586 None:intergenic
ATGGATGCATATAGGAGTGA+TGG 0.573342 1_3:-75882559 Msa0141140:CDS
TTAATCACTGAATTAGGAGT+GGG 0.574496 1_3:+75884358 None:intergenic
GGTGCTGCACGTGACGCCAA+TGG 0.575401 1_3:-75882578 Msa0141140:CDS
ATTATCTACCCAAGATGCCC+AGG 0.580934 1_3:+75882940 None:intergenic
TTGATATGTATGTTAATGAC+AGG 0.583676 1_3:-75883971 Msa0141140:CDS
CCATGAAAGTACTAACATGA+AGG 0.587525 1_3:+75884399 None:intergenic
AAATTAGGTTTCTAGGTGTG+AGG 0.589767 1_3:-75883895 Msa0141140:CDS
ACAAGTTCAGAGCTATGTTG+AGG 0.591680 1_3:-75884287 Msa0141140:CDS
TGACTGCAATCAGGTACAGA+TGG 0.595507 1_3:+75882511 None:intergenic
AGAATACTCGAAAATCTTCG+TGG 0.596909 1_3:-75884046 Msa0141140:CDS
GAATACTCGAAAATCTTCGT+GGG 0.608334 1_3:-75884045 Msa0141140:CDS
TCAATGTGTTAGTCAAAACT+GGG 0.608452 1_3:-75884432 Msa0141140:CDS
AAATCTTCGTGGGAAAAGAG+TGG 0.610197 1_3:-75884035 Msa0141140:CDS
ATTCTACGTGCATCAAACCT+AGG 0.613739 1_3:+75884064 None:intergenic
GTAAGATTGGAGAATGCACT+AGG 0.617474 1_3:+75884725 None:intergenic
TTGGAGAATGCACTAGGTGG+TGG 0.618034 1_3:+75884731 None:intergenic
TTCCACATATCAGGAACACC+AGG 0.639295 1_3:+75882478 None:intergenic
TGTCACTCCAAGTTCCCACA+TGG 0.643897 1_3:+75882536 None:intergenic
TTATTACTAGCTAAAGACGA+GGG 0.645950 1_3:+75882226 None:intergenic
TTGGAAGAGAACTATAGGCA+AGG 0.649599 1_3:-75882662 Msa0141140:CDS
TATAGGAGTGATGGCCATGT+GGG 0.667902 1_3:-75882550 Msa0141140:CDS
ATTATTACTAGCTAAAGACG+AGG 0.676935 1_3:+75882225 None:intergenic
AGATATGAGTGCTCCTGTGA+CGG 0.680460 1_3:-75882599 Msa0141140:CDS
AAGAGTTTACCATAAAAGGG+AGG 0.714047 1_3:-75882103 Msa0141140:three_prime_UTR
ATATAGGAGTGATGGCCATG+TGG 0.734312 1_3:-75882551 Msa0141140:CDS
AGATTGGAGAATGCACTAGG+TGG 0.776018 1_3:+75884728 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCATATAATATATACAGTTA+TGG + chr1_3:75882122-75882141 None:intergenic 15.0%
!!! ATGATAGATATACATTTTTA+TGG - chr1_3:75883196-75883215 Msa0141140:intron 15.0%
!!! ATTTTATCTAAAGAATTACA+GGG + chr1_3:75883489-75883508 None:intergenic 15.0%
!! ACAAAACAAAATGAATAATA+TGG + chr1_3:75883969-75883988 None:intergenic 15.0%
!! TGTTTAATATATATGGAAAT+TGG + chr1_3:75884459-75884478 None:intergenic 15.0%
!!! TTTTGCTTGTTTAATATATA+TGG + chr1_3:75884466-75884485 None:intergenic 15.0%
!! TAGCTAGTAATAATAAATTA+AGG - chr1_3:75884593-75884612 Msa0141140:CDS 15.0%
!! TTGAACAATTATTTACAATA+GGG + chr1_3:75884738-75884757 None:intergenic 15.0%
!! TTATATGATTGTGATAACAT+AGG - chr1_3:75882134-75882153 Msa0141140:three_prime_UTR 20.0%
!!! TTTGTTCAGTTTTGATATAT+GGG - chr1_3:75882204-75882223 Msa0141140:three_prime_UTR 20.0%
!! TATTCAATTAATACAGTTGA+TGG - chr1_3:75882240-75882259 Msa0141140:three_prime_UTR 20.0%
!! ATTCAATTAATACAGTTGAT+GGG - chr1_3:75882241-75882260 Msa0141140:three_prime_UTR 20.0%
!!! TTTTAGTCACAAAATTATGA+AGG - chr1_3:75882324-75882343 Msa0141140:three_prime_UTR 20.0%
!! TTTAGTCACAAAATTATGAA+GGG - chr1_3:75882325-75882344 Msa0141140:three_prime_UTR 20.0%
!!! ATTTTGTTTACATGCTTTTT+TGG - chr1_3:75883265-75883284 Msa0141140:intron 20.0%
!!! TTGGACTTAATTTTCATATT+TGG - chr1_3:75883284-75883303 Msa0141140:intron 20.0%
!!! TTAATTTTCATATTTGGATC+CGG - chr1_3:75883290-75883309 Msa0141140:intron 20.0%
!! GAAATTTATGAATTGTAAGA+AGG - chr1_3:75883367-75883386 Msa0141140:intron 20.0%
!!! ATCATGCATATGATAATTTT+GGG - chr1_3:75883459-75883478 Msa0141140:intron 20.0%
!!! CATTTTATCTAAAGAATTAC+AGG + chr1_3:75883490-75883509 None:intergenic 20.0%
!!! GATTAATTTTGCTAATCTTT+TGG - chr1_3:75884023-75884042 Msa0141140:CDS 20.0%
!! TAACATTTACATGAGTAATT+AGG - chr1_3:75884499-75884518 Msa0141140:CDS 20.0%
!! GTTGAACAATTATTTACAAT+AGG + chr1_3:75884739-75884758 None:intergenic 20.0%
! GAAATGAAAACTTGTAAGAT+TGG + chr1_3:75882100-75882119 None:intergenic 25.0%
!!! GTTTGTTCAGTTTTGATATA+TGG - chr1_3:75882203-75882222 Msa0141140:three_prime_UTR 25.0%
!! ACTTTAATCTCAAGAGTTTT+TGG - chr1_3:75882301-75882320 Msa0141140:three_prime_UTR 25.0%
! TAACTCTTAATCACTGAATT+AGG + chr1_3:75882460-75882479 None:intergenic 25.0%
! AAGAGTTATGATGAGATTAA+TGG - chr1_3:75882472-75882491 Msa0141140:CDS 25.0%
!! TCTAAAATCCAATGTTTCAA+GGG - chr1_3:75882546-75882565 Msa0141140:CDS 25.0%
!!! ATTGAGAAGCATCATATAAA+GGG + chr1_3:75882630-75882649 None:intergenic 25.0%
!!! GTTTTAATTGTTTTGCGAAT+GGG - chr1_3:75882668-75882687 Msa0141140:CDS 25.0%
! AAGATAGAGGTTATACAAAA+TGG - chr1_3:75882695-75882714 Msa0141140:CDS 25.0%
! TTGATATGTATGTTAATGAC+AGG - chr1_3:75882838-75882857 Msa0141140:intron 25.0%
!!! AAGAGTGTTTATGAAATCAA+AGG - chr1_3:75882874-75882893 Msa0141140:intron 25.0%
! ATAAGATCACCAAACAAATT+AGG - chr1_3:75882899-75882918 Msa0141140:CDS 25.0%
! GATGTTCTTATATTCAATTC+AGG - chr1_3:75883084-75883103 Msa0141140:intron 25.0%
!! TAATTTTCATATTTGGATCC+GGG - chr1_3:75883291-75883310 Msa0141140:intron 25.0%
! ATTTATGAATTGTAAGAAGG+TGG - chr1_3:75883370-75883389 Msa0141140:intron 25.0%
!! CATCATGCATATGATAATTT+TGG - chr1_3:75883458-75883477 Msa0141140:intron 25.0%
! CAAATAGTCTCATGAAAAAT+TGG - chr1_3:75883602-75883621 Msa0141140:intron 25.0%
!!! TAAATTTTTGTTTATGCGTG+TGG - chr1_3:75883671-75883690 Msa0141140:intron 25.0%
!! TTTTAATAGAATTTCCATGC+AGG - chr1_3:75883701-75883720 Msa0141140:CDS 25.0%
!!! GTTTTGAAAGCTGAATTAAT+CGG + chr1_3:75883838-75883857 None:intergenic 25.0%
!! CTTTTGATCATATCTGATAT+TGG + chr1_3:75884181-75884200 None:intergenic 25.0%
TGCATTAGTAGTGAAAGTTT+GGG + chr1_3:75882175-75882194 None:intergenic 30.0%
TTCACTACTAATGCAGTTAA+TGG - chr1_3:75882180-75882199 Msa0141140:three_prime_UTR 30.0%
TCACTACTAATGCAGTTAAT+GGG - chr1_3:75882181-75882200 Msa0141140:three_prime_UTR 30.0%
!! GTTTTGATATATGGGATAGT+AGG - chr1_3:75882212-75882231 Msa0141140:three_prime_UTR 30.0%
TTCAATGTGTTAGTCAAAAC+TGG - chr1_3:75882376-75882395 Msa0141140:three_prime_UTR 30.0%
TCAATGTGTTAGTCAAAACT+GGG - chr1_3:75882377-75882396 Msa0141140:three_prime_UTR 30.0%
CTTCATGTTAGTACTTTCAT+GGG - chr1_3:75882411-75882430 Msa0141140:three_prime_UTR 30.0%
TTAATCACTGAATTAGGAGT+GGG + chr1_3:75882454-75882473 None:intergenic 30.0%
!! CTCTAAAATCCAATGTTTCA+AGG - chr1_3:75882545-75882564 Msa0141140:CDS 30.0%
!! CATTGAGAAGCATCATATAA+AGG + chr1_3:75882631-75882650 None:intergenic 30.0%
TTAAAACCTCTTTCTGCAAA+TGG + chr1_3:75882655-75882674 None:intergenic 30.0%
!!! GGTTTTAATTGTTTTGCGAA+TGG - chr1_3:75882667-75882686 Msa0141140:CDS 30.0%
ACCAAACAAATTAGGTTTCT+AGG - chr1_3:75882907-75882926 Msa0141140:CDS 30.0%
!! ACCTAGAAACCTAATTTGTT+TGG + chr1_3:75882911-75882930 None:intergenic 30.0%
TAGATGATATTAGCCATGAA+TGG - chr1_3:75883052-75883071 Msa0141140:intron 30.0%
AGATGATATTAGCCATGAAT+GGG - chr1_3:75883053-75883072 Msa0141140:intron 30.0%
TTATATTCAATTCAGGTCAC+TGG - chr1_3:75883091-75883110 Msa0141140:intron 30.0%
! ATGAAAAATTGGTCTCTTAG+TGG - chr1_3:75883613-75883632 Msa0141140:intron 30.0%
AATATTAATCCTAACCTGCA+TGG + chr1_3:75883718-75883737 None:intergenic 30.0%
AGAATTTCATTCCACATATC+AGG + chr1_3:75884343-75884362 None:intergenic 30.0%
TTATTACTAGCTAAAGACGA+GGG + chr1_3:75884586-75884605 None:intergenic 30.0%
ATTATTACTAGCTAAAGACG+AGG + chr1_3:75884587-75884606 None:intergenic 30.0%
AACGAAGAGTTTACCATAAA+AGG - chr1_3:75884702-75884721 Msa0141140:five_prime_UTR 30.0%
ACGAAGAGTTTACCATAAAA+GGG - chr1_3:75884703-75884722 Msa0141140:five_prime_UTR 30.0%
CTGCATTAGTAGTGAAAGTT+TGG + chr1_3:75882176-75882195 None:intergenic 35.0%
TGATATATGGGATAGTAGGT+TGG - chr1_3:75882216-75882235 Msa0141140:three_prime_UTR 35.0%
!! TGATGGGTATGTTCAGATTT+TGG - chr1_3:75882257-75882276 Msa0141140:three_prime_UTR 35.0%
!! CCATGAAAGTACTAACATGA+AGG + chr1_3:75882413-75882432 None:intergenic 35.0%
CCTTCATGTTAGTACTTTCA+TGG - chr1_3:75882410-75882429 Msa0141140:three_prime_UTR 35.0%
CTTAATCACTGAATTAGGAG+TGG + chr1_3:75882455-75882474 None:intergenic 35.0%
GATGCATGTAATGTGTTTGA+TGG - chr1_3:75882568-75882587 Msa0141140:CDS 35.0%
GTAATGTGTTTGATGGAAGT+TGG - chr1_3:75882575-75882594 Msa0141140:CDS 35.0%
GAGGTTATACAAAATGGAGA+TGG - chr1_3:75882701-75882720 Msa0141140:CDS 35.0%
CTAGGAATATCACAGTTCTT+AGG + chr1_3:75882730-75882749 None:intergenic 35.0%
CTAAGAACTGTGATATTCCT+AGG - chr1_3:75882728-75882747 Msa0141140:intron 35.0%
AGAATACTCGAAAATCTTCG+TGG - chr1_3:75882763-75882782 Msa0141140:intron 35.0%
GAATACTCGAAAATCTTCGT+GGG - chr1_3:75882764-75882783 Msa0141140:intron 35.0%
!! TTGTTGGTGATTCATTGAGT+AGG - chr1_3:75882800-75882819 Msa0141140:intron 35.0%
ATTCATTGAGTAGGACTCAA+TGG - chr1_3:75882809-75882828 Msa0141140:intron 35.0%
TTCATTGAGTAGGACTCAAT+GGG - chr1_3:75882810-75882829 Msa0141140:intron 35.0%
! AAATTAGGTTTCTAGGTGTG+AGG - chr1_3:75882914-75882933 Msa0141140:CDS 35.0%
CATATCAAAAAGCTTAGTCC+TGG + chr1_3:75883121-75883140 None:intergenic 35.0%
AGTAAAGCATATGCATTACC+CGG + chr1_3:75883312-75883331 None:intergenic 35.0%
ATAGAATTTCCATGCAGGTT+AGG - chr1_3:75883706-75883725 Msa0141140:CDS 35.0%
TGCTAACATGATTATCAGAC+AGG - chr1_3:75883770-75883789 Msa0141140:CDS 35.0%
GCTAACATGATTATCAGACA+GGG - chr1_3:75883771-75883790 Msa0141140:CDS 35.0%
CTAACATGATTATCAGACAG+GGG - chr1_3:75883772-75883791 Msa0141140:CDS 35.0%
AATGCGATGATTCGAAAGTT+CGG + chr1_3:75883927-75883946 None:intergenic 35.0%
! TTTGTTGTCATTGTCTCATC+TGG + chr1_3:75883998-75884017 None:intergenic 35.0%
! TGTTTATCTTTTTGTGCCAG+TGG - chr1_3:75884088-75884107 Msa0141140:CDS 35.0%
! TAGTCACTTTGCAAGCATTA+TGG + chr1_3:75884120-75884139 None:intergenic 35.0%
ATGCTTGCAAAGTGACTAAA+AGG - chr1_3:75884122-75884141 Msa0141140:CDS 35.0%
ACATGTGATGTGTTAGTTAG+TGG - chr1_3:75884417-75884436 Msa0141140:CDS 35.0%
ACTCTTCGTTACAACACATT+TGG + chr1_3:75884692-75884711 None:intergenic 35.0%
AAGAGTTTACCATAAAAGGG+AGG - chr1_3:75884706-75884725 Msa0141140:five_prime_UTR 35.0%
GTAAGATTGGAGAATGCACT+AGG + chr1_3:75882087-75882106 None:intergenic 40.0%
AGTAGTGAAAGTTTGGGTGA+AGG + chr1_3:75882169-75882188 None:intergenic 40.0%
TGAAGGGTAATTGCAATGCT+TGG - chr1_3:75882341-75882360 Msa0141140:three_prime_UTR 40.0%
ACAAGTTCAGAGCTATGTTG+AGG - chr1_3:75882522-75882541 Msa0141140:CDS 40.0%
ACATGCATCCCTTGAAACAT+TGG + chr1_3:75882557-75882576 None:intergenic 40.0%
GTTTGATGGAAGTTGGATTC+AGG - chr1_3:75882582-75882601 Msa0141140:CDS 40.0%
CAATGTCCATTTGCAGAAAG+AGG - chr1_3:75882646-75882665 Msa0141140:CDS 40.0%
ATTCTACGTGCATCAAACCT+AGG + chr1_3:75882748-75882767 None:intergenic 40.0%
AAATCTTCGTGGGAAAAGAG+TGG - chr1_3:75882774-75882793 Msa0141140:intron 40.0%
! GGGAAAAGAGTGGTTTTTGT+TGG - chr1_3:75882784-75882803 Msa0141140:intron 40.0%
! AGTGTTGTCTTCACCCTTTT+CGG + chr1_3:75883018-75883037 None:intergenic 40.0%
CATCTGAATCAACCCATTCA+TGG + chr1_3:75883068-75883087 None:intergenic 40.0%
TATTCAATTCAGGTCACTGG+TGG - chr1_3:75883094-75883113 Msa0141140:intron 40.0%
GAACTTTCGAATCATCGCAT+TGG - chr1_3:75883926-75883945 Msa0141140:CDS 40.0%
AGCATTATGGTTATGTCCAC+TGG + chr1_3:75884107-75884126 None:intergenic 40.0%
TTGCCTATAGTTCTCTTCCA+AGG + chr1_3:75884148-75884167 None:intergenic 40.0%
TTGGAAGAGAACTATAGGCA+AGG - chr1_3:75884147-75884166 Msa0141140:CDS 40.0%
TCACTCCTATATGCATCCAT+TGG + chr1_3:75884250-75884269 None:intergenic 40.0%
ATGGATGCATATAGGAGTGA+TGG - chr1_3:75884250-75884269 Msa0141140:CDS 40.0%
AAACACCAATGACTGCAATC+AGG + chr1_3:75884310-75884329 None:intergenic 40.0%
CAACAAGTCACATTCTCTTC+AGG + chr1_3:75884534-75884553 None:intergenic 40.0%
CATTTGGATACACTTTGAGC+TGG + chr1_3:75884676-75884695 None:intergenic 40.0%
AGATTGGAGAATGCACTAGG+TGG + chr1_3:75882084-75882103 None:intergenic 45.0%
!! TCTGTTTTTCTCGTGAAGCC+TGG - chr1_3:75882973-75882992 Msa0141140:CDS 45.0%
! TTTTCTCGTGAAGCCTGGTT+CGG - chr1_3:75882978-75882997 Msa0141140:CDS 45.0%
GGTGAAGACAACACTGAGAT+TGG - chr1_3:75883023-75883042 Msa0141140:intron 45.0%
TCAAAACAGCTTTGCTCACC+TGG - chr1_3:75883851-75883870 Msa0141140:CDS 45.0%
CAAAACAGCTTTGCTCACCT+GGG - chr1_3:75883852-75883871 Msa0141140:CDS 45.0%
ATTATCTACCCAAGATGCCC+AGG + chr1_3:75883872-75883891 None:intergenic 45.0%
CTTTCGAATCATCGCATTGG+AGG - chr1_3:75883929-75883948 Msa0141140:CDS 45.0%
GCAAAGTGACTAAAAGGCCT+TGG - chr1_3:75884128-75884147 Msa0141140:CDS 45.0%
AGGCCTTGGAAGAGAACTAT+AGG - chr1_3:75884142-75884161 Msa0141140:CDS 45.0%
AGATATGAGTGCTCCTGTGA+CGG - chr1_3:75884210-75884229 Msa0141140:CDS 45.0%
TGACGCCAATGGATGCATAT+AGG - chr1_3:75884242-75884261 Msa0141140:CDS 45.0%
ATATAGGAGTGATGGCCATG+TGG - chr1_3:75884258-75884277 Msa0141140:CDS 45.0%
TATAGGAGTGATGGCCATGT+GGG - chr1_3:75884259-75884278 Msa0141140:CDS 45.0%
TGACTGCAATCAGGTACAGA+TGG + chr1_3:75884301-75884320 None:intergenic 45.0%
CTGTACCTGATTGCAGTCAT+TGG - chr1_3:75884302-75884321 Msa0141140:CDS 45.0%
! TGCAGTCATTGGTGTTTACC+TGG - chr1_3:75884313-75884332 Msa0141140:CDS 45.0%
TACCTGGTGTTCCTGATATG+TGG - chr1_3:75884329-75884348 Msa0141140:CDS 45.0%
TTCCACATATCAGGAACACC+AGG + chr1_3:75884334-75884353 None:intergenic 45.0%
TTGGAGAATGCACTAGGTGG+TGG + chr1_3:75882081-75882100 None:intergenic 50.0%
GCGAATGGGCGTAAAGATAG+AGG - chr1_3:75882682-75882701 Msa0141140:CDS 50.0%
TGCCTAGATTTGCGCCGAAA+AGG - chr1_3:75883001-75883020 Msa0141140:CDS 50.0%
GCCTAGATTTGCGCCGAAAA+GGG - chr1_3:75883002-75883021 Msa0141140:CDS 50.0%
! ACCCTTTTCGGCGCAAATCT+AGG + chr1_3:75883006-75883025 None:intergenic 50.0%
CATGATTATCAGACAGGGGC+TGG - chr1_3:75883776-75883795 Msa0141140:CDS 50.0%
!! AGACAGGGGCTGGTATTTTC+AGG - chr1_3:75883786-75883805 Msa0141140:CDS 50.0%
!!! AGGGGCTGGTATTTTCAGGT+TGG - chr1_3:75883790-75883809 Msa0141140:CDS 50.0%
!! GTTGGTAGCTCACTGAAGCT+TGG - chr1_3:75883808-75883827 Msa0141140:CDS 50.0%
TTTGCTCACCTGGGCATCTT+GGG - chr1_3:75883861-75883880 Msa0141140:CDS 50.0%
TCATCGCATTGGAGGTGAGT+TGG - chr1_3:75883937-75883956 Msa0141140:CDS 50.0%
TGTCACTCCAAGTTCCCACA+TGG + chr1_3:75884276-75884295 None:intergenic 50.0%
! GGGATAGCACCTCCCTTTTA+TGG + chr1_3:75884718-75884737 None:intergenic 50.0%
!! GCAAATCTAGGCACCGAACC+AGG + chr1_3:75882994-75883013 None:intergenic 55.0%
! ATTCAGGTCACTGGTGGACC+AGG - chr1_3:75883100-75883119 Msa0141140:intron 55.0%
CTTTGCTCACCTGGGCATCT+TGG - chr1_3:75883860-75883879 Msa0141140:CDS 55.0%
GTGATGGCCATGTGGGAACT+TGG - chr1_3:75884266-75884285 Msa0141140:CDS 55.0%
CTAGCTAAAGACGAGGGAGC+AGG + chr1_3:75884580-75884599 None:intergenic 55.0%
GTCACGTGCAGCACCGTCAC+AGG + chr1_3:75884226-75884245 None:intergenic 65.0%
! GGTGCTGCACGTGACGCCAA+TGG - chr1_3:75884231-75884250 Msa0141140:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 75882044 75884787 75882044 ID=Msa0141140;Name=Msa0141140
chr1_3 mRNA 75882044 75884787 75882044 ID=Msa0141140-mRNA-1;Parent=Msa0141140;Name=Msa0141140-mRNA-1;_AED=0.05;_eAED=0.05;_QI=146|1|1|1|1|1|3|388|466
chr1_3 exon 75882044 75882723 75882044 ID=Msa0141140-mRNA-1:exon:26472;Parent=Msa0141140-mRNA-1
chr1_3 exon 75882881 75883039 75882881 ID=Msa0141140-mRNA-1:exon:26471;Parent=Msa0141140-mRNA-1
chr1_3 exon 75883692 75884787 75883692 ID=Msa0141140-mRNA-1:exon:26470;Parent=Msa0141140-mRNA-1
chr1_3 five_prime_UTR 75884642 75884787 75884642 ID=Msa0141140-mRNA-1:five_prime_utr;Parent=Msa0141140-mRNA-1
chr1_3 CDS 75883692 75884641 75883692 ID=Msa0141140-mRNA-1:cds;Parent=Msa0141140-mRNA-1
chr1_3 CDS 75882881 75883039 75882881 ID=Msa0141140-mRNA-1:cds;Parent=Msa0141140-mRNA-1
chr1_3 CDS 75882432 75882723 75882432 ID=Msa0141140-mRNA-1:cds;Parent=Msa0141140-mRNA-1
chr1_3 three_prime_UTR 75882044 75882431 75882044 ID=Msa0141140-mRNA-1:three_prime_utr;Parent=Msa0141140-mRNA-1
Gene Sequence

>Msa0141140

ATGCAGTTAATGGGTTTGTTCAGTTTTGATATATGGGATAGTAGGTTGGTTATTCAATTAATACAGTTGATGGGTATGTTCAGATTTTGGATTTCATTTACAAAGTTTAGAACTTTAATCTCAAGAGTTTTTGGTTTTAGTCACAAAATTATGAAGGGTAATTGCAATGCTTGGATCTTAGTTTCTTTCAATGTGTTAGTCAAAACTGGGTCTTTGATTTCCTTCATGTTAGTACTTTCATGGGTTTATTCATATGCATTTCCCACTCCTAATTCAGTGATTAAGAGTTATGATGAGATTAATGGTAACATTAATAGTAATAGTTCTCATTTACAAGTTCAGAGCTATGTTGAGGCTCTAAAATCCAATGTTTCAAGGGATGCATGTAATGTGTTTGATGGAAGTTGGATTCAGGATGATAGTTATAGTTATAGTTACCCTTTATATGATGCTTCTCAATGTCCATTTGCAGAAAGAGGTTTTAATTGTTTTGCGAATGGGCGTAAAGATAGAGGTTATACAAAATGGAGATGGAAACCTAAGAACTGTGATATTCCTAGGTTTGATGCACGTAGAATACTCGAAAATCTTCGTGGGAAAAGAGTGGTTTTTGTTGGTGATTCATTGAGTAGGACTCAATGGGAGTCTTTGATATGTATGTTAATGACAGGTGTTGAGAATAAGAAGAGTGTTTATGAAATCAAAGGCAATAAGATCACCAAACAAATTAGGTTTCTAGGTGTGAGGTTTAGTTCTTTTGATGTTAGAATTGATTTTTATCGTTCTGTTTTTCTCGTGAAGCCTGGTTCGGTGCCTAGATTTGCGCCGAAAAGGGTGAAGACAACACTGAGATTGGACAAGATAGATGATATTAGCCATGAATGGGTTGATTCAGATGTTCTTATATTCAATTCAGGTCACTGGTGGACCAGGACTAAGCTTTTTGATATGGGCTGGTATTTTCAGGTTGGTAGCTCACTGAAGCTTGGAATGCCGATTAATTCAGCTTTCAAAACAGCTTTGCTCACCTGGGCATCTTGGGTAGATAATACAGTTAACACAAACAGAACAAGAGTATTCTTCCGAACTTTCGAATCATCGCATTGGAGTGGACATAACCATAATGCTTGCAAAGTGACTAAAAGGCCTTGGAAGAGAACTATAGGCAAGGACAAAAGTCCAATATCAGATATGATCAAAAGAGTTGTGAGAGATATGAGTGCTCCTGTGACGGTGCTGCACGTGACGCCAATGGATGCATATAGGAGTGATGGCCATGTGGGAACTTGGAGTGACAAACCATCTGTACCTGATTGCAGTCATTGGTGTTTACCTGGTGTTCCTGATATGTGGAATGAAATTCTCTTCTCATACTTGCTACAAAAAGATGAAGCAAGTTAG
Protein sequence

>Msa0141140

MQLMGLFSFDIWDSRLVIQLIQLMGMFRFWISFTKFRTLISRVFGFSHKIMKGNCNAWILVSFNVLVKTGSLISFMLVLSWVYSYAFPTPNSVIKSYDEINGNINSNSSHLQVQSYVEALKSNVSRDACNVFDGSWIQDDSYSYSYPLYDASQCPFAERGFNCFANGRKDRGYTKWRWKPKNCDIPRFDARRILENLRGKRVVFVGDSLSRTQWESLICMLMTGVENKKSVYEIKGNKITKQIRFLGVRFSSFDVRIDFYRSVFLVKPGSVPRFAPKRVKTTLRLDKIDDISHEWVDSDVLIFNSGHWWTRTKLFDMGWYFQVGSSLKLGMPINSAFKTALLTWASWVDNTVNTNRTRVFFRTFESSHWSGHNHNACKVTKRPWKRTIGKDKSPISDMIKRVVRDMSAPVTVLHVTPMDAYRSDGHVGTWSDKPSVPDCSHWCLPGVPDMWNEILFSYLLQKDEAS*