AlfalfaGEDB | Msa0379710

M. sativa cultivar zhongmu-4 / Msa0379710

KEGG: -
GO: GO:0001101 GO:0003002 GO:0003674 GO:0003676 GO:0003723 GO:0003725 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004525 GO:0004540 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006379 GO:0006396 GO:0006725 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009735 GO:0009737 GO:0009892 GO:0009954 GO:0009987 GO:0010033 GO:0010051 GO:0010267 GO:0010305 GO:0010445 GO:0010467 GO:0010468 GO:0010589 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016071 GO:0016246 GO:0016441 GO:0016458 GO:0016604 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031053 GO:0031054 GO:0031974 GO:0031981 GO:0032296 GO:0032501 GO:0032502 GO:0033993 GO:0034470 GO:0034641 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0035198 GO:0035279 GO:0040029 GO:0042221 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043331 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048519 GO:0048856 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0061980 GO:0065007 GO:0070013 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0097305 GO:0098795 GO:0140098 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1901700
PFAM: PF00035.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0379710	XP_003602894.2	96.828	662	21	0	1	662	1	662	0.0	1310

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0379710	sp\|O04492\|DRB1_ARATH	64.362	188	66	1	12	199	9	195	3.46e-77	255

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0379710	G7J4K9	96.828	662	21	0	1	662	1	662	0.0	1310

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0006510	Msa0379710	0.833249	5.943488e-56	-8.615850e-47
Msa0015670	Msa0379710	0.840210	9.972708e-58	-8.615850e-47
Msa0042550	Msa0379710	0.806449	8.180138e-50	-8.615850e-47
Msa0045550	Msa0379710	0.822762	1.991867e-53	-8.615850e-47
Msa0045910	Msa0379710	0.826283	2.953282e-54	-8.615850e-47
Msa0055070	Msa0379710	0.830558	2.745235e-55	-8.615850e-47
Msa0077450	Msa0379710	0.825715	4.029729e-54	-8.615850e-47
Msa0101020	Msa0379710	0.822447	2.357680e-53	-8.615850e-47
Msa0119320	Msa0379710	0.812342	4.448842e-51	-8.615850e-47
Msa0145110	Msa0379710	0.811730	6.048720e-51	-8.615850e-47
Msa0168630	Msa0379710	0.815337	9.734493e-52	-8.615850e-47
Msa0169440	Msa0379710	0.820770	5.753176e-53	-8.615850e-47
Msa0170140	Msa0379710	0.807162	5.783314e-50	-8.615850e-47
Msa0178510	Msa0379710	0.805845	1.096749e-49	-8.615850e-47
Msa0187030	Msa0379710	0.806728	7.146222e-50	-8.615850e-47
Msa0193540	Msa0379710	0.851689	7.536078e-61	-8.615850e-47
Msa0200560	Msa0379710	0.819331	1.228548e-52	-8.615850e-47
Msa0225640	Msa0379710	0.821068	4.914494e-53	-8.615850e-47
Msa0227230	Msa0379710	0.813920	2.004497e-51	-8.615850e-47
Msa0230370	Msa0379710	0.807971	3.894802e-50	-8.615850e-47
Msa0235470	Msa0379710	0.821332	4.271611e-53	-8.615850e-47
Msa0377440	Msa0379710	0.815309	9.873557e-52	-8.615850e-47
Msa0379710	Msa0390960	0.803518	3.354711e-49	-8.615850e-47
Msa0379710	Msa0429090	0.925098	2.906606e-90	-8.615850e-47
Msa0379710	Msa0436370	0.836727	7.900817e-57	-8.615850e-47
Msa0379710	Msa0475500	0.937025	6.766936e-98	-8.615850e-47
Msa0379710	Msa0517650	0.805309	1.420366e-49	-8.615850e-47
Msa0379710	Msa0572420	0.843025	1.805536e-58	-8.615850e-47
Msa0379710	Msa0572480	0.831575	1.544192e-55	-8.615850e-47
Msa0379710	Msa0573040	0.817311	3.522473e-52	-8.615850e-47
Msa0379710	Msa0689760	0.818357	2.044372e-52	-8.615850e-47
Msa0379710	Msa0716860	0.802443	5.597215e-49	-8.615850e-47
Msa0379710	Msa0718070	0.818663	1.743036e-52	-8.615850e-47
Msa0379710	Msa0747650	0.995832	2.200636e-220	-8.615850e-47
Msa0379710	Msa0750250	0.808151	3.565004e-50	-8.615850e-47
Msa0379710	Msa0751260	0.820861	5.484528e-53	-8.615850e-47
Msa0379710	Msa0780280	0.816866	4.433656e-52	-8.615850e-47
Msa0379710	Msa0800770	0.812721	3.675813e-51	-8.615850e-47
Msa0379710	Msa0809140	0.805312	1.418898e-49	-8.615850e-47
Msa0379710	Msa0821800	0.810866	9.314420e-51	-8.615850e-47
Msa0379710	Msa0827150	0.833726	4.517990e-56	-8.615850e-47
Msa0379710	Msa0838930	0.824233	9.016909e-54	-8.615850e-47
Msa0379710	Msa0839000	0.818861	1.571720e-52	-8.615850e-47
Msa0379710	Msa0861830	0.800850	1.187884e-48	-8.615850e-47
Msa0379710	Msa0902710	0.802605	5.181771e-49	-8.615850e-47
Msa0379710	Msa0975940	0.800017	1.755336e-48	-8.615850e-47
Msa0379710	Msa0981310	0.806131	9.549024e-50	-8.615850e-47
Msa0379710	Msa1000190	0.808304	3.307766e-50	-8.615850e-47
Msa0379710	Msa1008750	0.832690	8.186231e-56	-8.615850e-47
Msa0379710	Msa1009390	0.829806	4.188658e-55	-8.615850e-47
Msa0379710	Msa1070840	0.806885	6.619214e-50	-8.615850e-47
Msa0379710	Msa1093480	0.821257	4.446005e-53	-8.615850e-47
Msa0379710	Msa1096060	0.844452	7.494593e-59	-8.615850e-47
Msa0379710	Msa1098270	0.833463	5.256859e-56	-8.615850e-47
Msa0379710	Msa1098290	0.837550	4.864801e-57	-8.615850e-47
Msa0379710	Msa1118760	0.837466	5.113228e-57	-8.615850e-47
Msa0379710	Msa1133570	0.808154	3.559533e-50	-8.615850e-47
Msa0379710	Msa1138280	0.814428	1.548214e-51	-8.615850e-47
Msa0379710	Msa1138320	0.852149	5.580466e-61	-8.615850e-47
Msa0379710	Msa1158660	0.832818	7.606543e-56	-8.615850e-47
Msa0379710	Msa1170130	0.815024	1.142815e-51	-8.615850e-47
Msa0379710	Msa1225200	0.844946	5.517408e-59	-8.615850e-47
Msa0379710	Msa1288450	0.803835	2.884374e-49	-8.615850e-47
Msa0379710	Msa1319820	0.804543	2.053691e-49	-8.615850e-47
Msa0379710	Msa1359920	0.868205	7.760033e-66	-8.615850e-47
Msa0379710	Msa1366300	0.823022	1.731892e-53	-8.615850e-47
Msa0379710	Msa1372150	0.805873	1.081673e-49	-8.615850e-47
Msa0379710	Msa1379850	0.835830	1.335449e-56	-8.615850e-47
Msa0379710	Msa1400070	0.813010	3.178285e-51	-8.615850e-47
Msa0379710	Msa1420250	0.816498	5.360503e-52	-8.615850e-47
Msa0379710	Msa1426570	0.804520	2.077091e-49	-8.615850e-47
Msa0379710	Msa1433220	0.843651	1.229057e-58	-8.615850e-47
Msa0379710	Msa1445220	0.815739	7.922689e-52	-8.615850e-47
Msa0379710	Msa1446780	0.811430	7.027831e-51	-8.615850e-47
Msa0243250	Msa0379710	0.837165	6.105936e-57	-8.615850e-47
Msa0274630	Msa0379710	0.855999	4.327288e-62	-8.615850e-47
Msa0276750	Msa0379710	-0.800812	1.209172e-48	-8.615850e-47
Msa0277420	Msa0379710	0.810534	1.099141e-50	-8.615850e-47
Msa0312530	Msa0379710	0.801699	7.961053e-49	-8.615850e-47
Msa0314060	Msa0379710	0.836254	1.042088e-56	-8.615850e-47
Msa0317270	Msa0379710	0.827055	1.932249e-54	-8.615850e-47
Msa0320800	Msa0379710	0.802677	5.008050e-49	-8.615850e-47
Msa0339280	Msa0379710	0.833655	4.708483e-56	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0379710	MtrunA17_Chr3g0132821	96.526	662	21	1	1	662	1	660	0.0	1300
Msa0379710	MtrunA17_Chr7g0273611	38.462	156	94	1	18	173	1	154	3.84e-25	109
Msa0379710	MtrunA17_Chr4g0029001	37.500	152	93	1	18	169	1	150	1.15e-21	98.6
Msa0379710	MtrunA17_Chr2g0326721	36.842	152	94	1	18	169	1	150	1.66e-21	97.4
Msa0379710	MtrunA17_Chr4g0002041	34.177	158	100	2	19	176	28	181	1.19e-20	93.6
Msa0379710	MtrunA17_Chr5g0435011	33.333	159	102	2	18	176	27	181	2.57e-19	91.3
Msa0379710	MtrunA17_Chr6g0461131	35.625	160	89	4	17	173	157	305	3.50e-17	85.1
Msa0379710	MtrunA17_Chr3g0118921	32.468	154	93	4	20	173	50	192	1.82e-13	72.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0379710	AT1G09700.2	64.362	188	66	1	12	199	9	195	8.53e-80	255
Msa0379710	AT1G09700.1	64.362	188	66	1	12	199	9	195	3.52e-78	255
Msa0379710	AT3G26932.1	40.385	156	91	1	18	173	1	154	5.63e-28	116
Msa0379710	AT3G26932.2	40.385	156	91	1	18	173	1	154	5.63e-28	116
Msa0379710	AT5G41070.1	32.243	214	125	3	18	231	1	194	5.27e-24	105
Msa0379710	AT2G28380.1	36.196	163	102	1	18	180	1	161	3.10e-22	100
Msa0379710	AT3G62800.3	31.839	223	135	5	17	239	3	208	1.06e-21	97.1
Msa0379710	AT3G62800.2	31.839	223	135	5	17	239	3	208	1.52e-21	97.4
Msa0379710	AT3G62800.1	31.839	223	135	5	17	239	3	208	1.52e-21	97.4

Find 148 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATATCGTATATTATTTATTT+TGG	0.107367	3_1:+81059561	None:intergenic
CTTCCCATGAACCTTCTTTC+AGG	0.162473	3_1:-81058211	Msa0379710:CDS
ATCTAAATTAAGAATATTTC+TGG	0.176270	3_1:+81059616	None:intergenic
TCTAAGAAATCACGCTTTAA+AGG	0.215863	3_1:-81057091	Msa0379710:CDS
CTGTCATTCCATCCCGAAAA+AGG	0.224505	3_1:-81057156	Msa0379710:CDS
ATTTCTATGTGGTTTCTTCT+TGG	0.224812	3_1:+81057060	None:intergenic
ATTCCCAATATTGATCTCTT+TGG	0.236860	3_1:+81055854	None:intergenic
TCAGAAGTCATGAAGAATTC+TGG	0.244468	3_1:-81055978	Msa0379710:CDS
CTGCTTCAGATTTGATTTCC+TGG	0.251417	3_1:+81056009	None:intergenic
CTGCTTCAGATTTGATTTCC+TGG	0.251417	3_1:+81056216	None:intergenic
CTGCTTCAGATTTGATTTCC+TGG	0.251417	3_1:+81056321	None:intergenic
CTGCTTCAGATTTGATTTCC+TGG	0.267375	3_1:+81056111	None:intergenic
CTGCTTCAGATTTGATTTCC+TGG	0.275383	3_1:+81056840	None:intergenic
CTGCTTCAGATTTGATTTCC+TGG	0.275383	3_1:+81056942	None:intergenic
CAATCCAAAGAGATCAATAT+TGG	0.281542	3_1:-81055858	Msa0379710:CDS
CTGCTTCAGATTTGACTTCC+TGG	0.293244	3_1:+81056426	None:intergenic
AGCTGCAGAGGTTGCTTTGA+TGG	0.313250	3_1:-81058114	Msa0379710:CDS
CTGCTCCAGATTTGACTTCC+TGG	0.313787	3_1:+81056738	None:intergenic
CTGCTTCAGATTTAACTTCC+TGG	0.322914	3_1:+81056636	None:intergenic
GATGGAGCAAAGATCAATAA+TGG	0.336169	3_1:-81057004	Msa0379710:CDS
TCCGTTCTCAGAATTCTTCA+TGG	0.354796	3_1:+81056700	None:intergenic
TGCTCCCGAGGGATACATAT+TGG	0.360088	3_1:-81055811	Msa0379710:CDS
GCCATGCAGTATTATGATAA+TGG	0.370303	3_1:-81056803	Msa0379710:CDS
ATTGGAGGGATGCTCTATAT+TGG	0.371085	3_1:-81057289	Msa0379710:CDS
AGAGACATTAGCTGCAATAA+AGG	0.374142	3_1:-81056549	Msa0379710:CDS
GAATTCTGCATGGCTTCATC+TGG	0.378975	3_1:+81056605	None:intergenic
ATTGTGCAAGAATTTACTTC+AGG	0.382437	3_1:-81057410	Msa0379710:CDS
AAGCGTGATTTCTTAGACTT+CGG	0.393072	3_1:+81057097	None:intergenic
GGCCTCCAGGAAGTCAAATC+TGG	0.396478	3_1:-81056743	Msa0379710:CDS
TCTGTGCATACTCTTGCAAT+TGG	0.398490	3_1:+81058279	None:intergenic
GCCATTGTATCAGAGCAAAA+AGG	0.401184	3_1:-81057359	Msa0379710:CDS
TGACAGTCAAATGGCCAAAC+TGG	0.404308	3_1:+81057173	None:intergenic
TTGATGGAGTTGGCTAAAAC+TGG	0.412242	3_1:-81058098	Msa0379710:CDS
CGATGCAGAATTCTGAGAAC+GGG	0.413538	3_1:-81056280	Msa0379710:CDS
CAGGCTTCTGAAAACCAGTT+TGG	0.414886	3_1:-81057187	Msa0379710:CDS
TGCAATAAAGGAAGTCAAAT+CGG	0.421774	3_1:-81056537	Msa0379710:CDS
CTAAGAAATCACGCTTTAAA+GGG	0.422488	3_1:-81057090	Msa0379710:CDS
CCATGCAGAATTCTGAGAAC+GGG	0.423049	3_1:-81056385	Msa0379710:CDS
CAGAAGTCATGAAGAATTCT+GGG	0.423704	3_1:-81055977	Msa0379710:CDS
AGATGAAATTGAAGAGTGGT+TGG	0.426963	3_1:+81059384	None:intergenic
TCAACCGTACACGAATATAA+TGG	0.434098	3_1:+81057313	None:intergenic
TTGACCTGAAAGAAGGTTCA+TGG	0.434596	3_1:+81058207	None:intergenic
AGAGGTTGCTTTGATGGAGT+TGG	0.436246	3_1:-81058108	Msa0379710:CDS
ACAGAATTGCAATGGAGATA+TGG	0.444900	3_1:-81055766	Msa0379710:CDS
ATGGAGCAAAGATCAATAAT+GGG	0.448036	3_1:-81057003	Msa0379710:CDS
ACCTTGGAAATCTTCGTTAG+TGG	0.448531	3_1:+81059336	None:intergenic
GTTCGGTATGATTCTTTGAC+TGG	0.460775	3_1:-81058167	Msa0379710:CDS
AATCCAAAGAGATCAATATT+GGG	0.463678	3_1:-81055857	Msa0379710:CDS
CAATAATGGGGAAGAATCAC+TGG	0.468073	3_1:-81056990	Msa0379710:CDS
AGAGACATTAGCTGCAGTCC+AGG	0.469629	3_1:-81056129	Msa0379710:CDS
CAGCATTGTCAGTGTTAATA+CGG	0.476206	3_1:+81057029	None:intergenic
AAGCCTGGGATGCATTTGTC+TGG	0.480978	3_1:+81057203	None:intergenic
TGCAATGGAGATATGGTCTC+TGG	0.488580	3_1:-81055759	Msa0379710:CDS
AGCAGAGCAGTCAGCTGCAG+AGG	0.490356	3_1:-81058126	Msa0379710:CDS
TTCTGCATGGCTTCATCTGA+AGG	0.494295	3_1:+81056398	None:intergenic
TTCTGCATGGCTTCATCTGA+AGG	0.494295	3_1:+81056503	None:intergenic
GCAAGTGCTAATGATGAATC+TGG	0.496570	3_1:-81056968	Msa0379710:CDS
TTCAGATTTGATTTCCTGGA+TGG	0.500082	3_1:+81056220	None:intergenic
GCCATGACAAATTCTGAAAA+CGG	0.500363	3_1:-81056176	Msa0379710:CDS
TTCAGATTTGATTTCCTGGA+TGG	0.500978	3_1:+81056325	None:intergenic
TAATGATGAATCTGGCCTCC+AGG	0.501653	3_1:-81056960	Msa0379710:CDS
CGTATTAACACTGACAATGC+TGG	0.505782	3_1:-81057028	Msa0379710:CDS
AGAGACATTAGCTGGCCTCC+AGG	0.509998	3_1:-81056654	Msa0379710:CDS
AGAGACATTAGCTGGCCTCC+AGG	0.509998	3_1:-81056756	Msa0379710:CDS
TTCTGCATCGCTTCATCTGA+AGG	0.512503	3_1:+81056293	None:intergenic
CATGAGAAAGAGACATTAGC+TGG	0.514047	3_1:-81056035	Msa0379710:CDS
AGAAACATTAGCTGCCATCC+AGG	0.514509	3_1:-81056444	Msa0379710:CDS
GATGAAATTGAAGAGTGGTT+GGG	0.515775	3_1:+81059385	None:intergenic
CGGCGCTTCTTATTTCTATG+TGG	0.516238	3_1:+81057049	None:intergenic
ATCTGAAGCAGCATTCCCTT+CGG	0.519137	3_1:-81056828	Msa0379710:CDS
CATGAGAAAGAGACATTAGC+TGG	0.520527	3_1:-81056662	Msa0379710:CDS
AGAGACATTAGCTGCCATCC+AGG	0.520770	3_1:-81056234	Msa0379710:CDS
GAATATAATGGTGCCCTACC+TGG	0.523233	3_1:+81057325	None:intergenic
ATCACTGTTGACCTGAAAGA+AGG	0.527088	3_1:+81058200	None:intergenic
TTCAGATTTGACTTCCTGGA+TGG	0.527890	3_1:+81056430	None:intergenic
TCCTTAGTAGTTTCATACAC+AGG	0.528972	3_1:+81058239	None:intergenic
CAGTGATTATGAATGATGTT+CGG	0.529179	3_1:-81058184	Msa0379710:CDS
TATTCGTGTACGGTTGACAT+TGG	0.530174	3_1:-81057307	Msa0379710:CDS
ACCTGTGTATGAAACTACTA+AGG	0.531516	3_1:-81058240	Msa0379710:CDS
AGAGACATTAGCTGGCCTCC+AGG	0.532686	3_1:-81056858	Msa0379710:CDS
CATGAGAAAGAGACATTAGC+TGG	0.534007	3_1:-81056866	Msa0379710:CDS
CATGAGAAAGAGACATTAGC+TGG	0.534418	3_1:-81056764	Msa0379710:CDS
TGAAGTGTGAGATTAGTGTC+AGG	0.535569	3_1:+81059677	None:intergenic
GATTATTCAAAACAAATGAC+TGG	0.535856	3_1:+81055916	None:intergenic
TCGTGTACGGTTGACATTGG+AGG	0.535923	3_1:-81057304	Msa0379710:CDS
AACGGAATCCATTGCTGATG+AGG	0.536315	3_1:-81057131	Msa0379710:CDS
TATCCAGACAAATGCATCCC+AGG	0.536475	3_1:-81057206	Msa0379710:CDS
CAAGAGTATGCACAGAAAGC+AGG	0.538168	3_1:-81058272	Msa0379710:CDS
CATCGCCAATATGTATCCCT+CGG	0.539377	3_1:+81055806	None:intergenic
TTCTGCATGGCTTCATCTGG+AGG	0.540711	3_1:+81056608	None:intergenic
TTTGTCATGGCTTCATCTGA+AGG	0.542263	3_1:+81056188	None:intergenic
CGTGTACGGTTGACATTGGA+GGG	0.543141	3_1:-81057303	Msa0379710:CDS
AGAGACATTAGCTGGCATCC+AGG	0.543604	3_1:-81056027	Msa0379710:CDS
ATGAACAAACAGAATTGCAA+TGG	0.547564	3_1:-81055774	Msa0379710:CDS
GAATTCTTCATGGCTTCTGA+AGG	0.548362	3_1:+81056710	None:intergenic
GGGATGGAATGACAGTCAAA+TGG	0.548556	3_1:+81057164	None:intergenic
ATCGCCAATATGTATCCCTC+GGG	0.552320	3_1:+81055807	None:intergenic
GGATGACACACCACCAGGTA+GGG	0.554430	3_1:-81057338	Msa0379710:CDS
GGCACCATTATATTCGTGTA+CGG	0.559813	3_1:-81057317	Msa0379710:CDS
GGAGGGATGCTCTATATTGG+AGG	0.559971	3_1:-81057286	Msa0379710:CDS
ATCTTCGTTAGTGGTGGACA+TGG	0.562155	3_1:+81059345	None:intergenic
AACACTGACAATGCTGGTGA+TGG	0.565998	3_1:-81057022	Msa0379710:CDS
AGAAGTGTCATTTGCTCCCG+AGG	0.566950	3_1:-81055823	Msa0379710:CDS
AACGGCGCAGATTCCGACAC+AGG	0.569849	3_1:-81059475	Msa0379710:five_prime_UTR
GTGTATGAAACTACTAAGGA+AGG	0.573469	3_1:-81058236	Msa0379710:CDS
TATGCACAGAAAGCAGGACT+TGG	0.576788	3_1:-81058266	Msa0379710:CDS
TAATACTGCATGGCTTCCGA+AGG	0.576922	3_1:+81056812	None:intergenic
TCCATTATCATAATACTGCA+TGG	0.577735	3_1:+81056802	None:intergenic
TTGGAAATCTTCGTTAGTGG+TGG	0.577745	3_1:+81059339	None:intergenic
AATTCTTCATGACTTCTGAA+AGG	0.581745	3_1:+81055982	None:intergenic
GAGAAGATGAAATTGAAGAG+TGG	0.587475	3_1:+81059380	None:intergenic
CTTCAGATTTGATTTCCTGG+AGG	0.587651	3_1:+81056843	None:intergenic
CTTCAGATTTGATTTCCTGG+AGG	0.587651	3_1:+81056945	None:intergenic
AGTGGTGGACATGGTGAGAG+AGG	0.590480	3_1:+81059354	None:intergenic
GCCATGCAGAATTCTGAGAA+CGG	0.591866	3_1:-81056386	Msa0379710:CDS
TTGTCATGGCTTCATCTGAA+GGG	0.594389	3_1:+81056189	None:intergenic
TGACCTGAAAGAAGGTTCAT+GGG	0.594942	3_1:+81058208	None:intergenic
CCCGTTCTCAGAATTCTGCA+TGG	0.596419	3_1:+81056385	None:intergenic
TCCGTTCTCAGAATTCTGCA+TGG	0.602147	3_1:+81056490	None:intergenic
CTGAAAGAAGGTTCATGGGA+AGG	0.602671	3_1:+81058212	None:intergenic
TTTCGAAGCCTCATCAGCAA+TGG	0.604541	3_1:+81057123	None:intergenic
GCGATGCAGAATTCTGAGAA+CGG	0.606253	3_1:-81056281	Msa0379710:CDS
TCCGTTCTCAGAATTCTGCA+TGG	0.609171	3_1:+81056595	None:intergenic
AGGATGACACACCACCAGGT+AGG	0.617789	3_1:-81057339	Msa0379710:CDS
TCTGCATGGCTTCATCTGAA+GGG	0.618565	3_1:+81056399	None:intergenic
TCTGCATGGCTTCATCTGAA+GGG	0.618565	3_1:+81056504	None:intergenic
GAAGTGTCATTTGCTCCCGA+GGG	0.622643	3_1:-81055822	Msa0379710:CDS
TGAGAACAAAGTTGTGTGTA+CGG	0.623105	3_1:+81059447	None:intergenic
CTCCAGATTTGACTTCCTGG+AGG	0.623620	3_1:+81056741	None:intergenic
ATACATATTGGCGATGAGCG+TGG	0.624072	3_1:-81055799	Msa0379710:CDS
AGCTAATAAAGCAGTTCTCG+CGG	0.626972	3_1:+81057228	None:intergenic
GCCATGAAGAATTCTGAGAA+CGG	0.628543	3_1:-81056701	Msa0379710:CDS
TCTGCATGGCTTCATCTGGA+GGG	0.629877	3_1:+81056609	None:intergenic
AGAGACGTTAGCTACCATCC+AGG	0.630811	3_1:-81056339	Msa0379710:CDS
AATTCGTCATGGCTTCTGAA+CGG	0.635308	3_1:+81056084	None:intergenic
TCTGTTCTCAGAATTCGTCA+TGG	0.636980	3_1:+81056073	None:intergenic
GCCATGCAGAATTCTGAGAA+CGG	0.638030	3_1:-81056491	Msa0379710:CDS
GCCATGCAGAATTCTGAGAA+CGG	0.638440	3_1:-81056596	Msa0379710:CDS
GTGTACGGTGAGGCCTGTGT+CGG	0.646839	3_1:+81059462	None:intergenic
TGTATGAAACTACTAAGGAA+GGG	0.648493	3_1:-81058235	Msa0379710:CDS
AATACTGCATGGCTTCCGAA+GGG	0.654813	3_1:+81056813	None:intergenic
ACCACTAACGAAGATTTCCA+AGG	0.657994	3_1:-81059337	Msa0379710:intron
CTTCAGATTTAACTTCCTGG+AGG	0.663895	3_1:+81056639	None:intergenic
CATGCAGAATTCTGAGAACG+GGG	0.674016	3_1:-81056384	Msa0379710:CDS
TGGAGCAAAGATCAATAATG+GGG	0.696605	3_1:-81057002	Msa0379710:CDS
ACAAAGTTGTGTGTACGGTG+AGG	0.701059	3_1:+81059452	None:intergenic
GATGCAGAATTCTGAGAACG+GGG	0.733105	3_1:-81056279	Msa0379710:CDS
TATAATGGTGCCCTACCTGG+TGG	0.785345	3_1:+81057328	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATATCGTATATTATTTATTT+TGG	+	chr3_1:81055881-81055900	None:intergenic	10.0%
!!!	ACAAATTATAATTTTTTTGT+TGG	-	chr3_1:81057408-81057427	Msa0379710:CDS	10.0%
!!	ATCTAAATTAAGAATATTTC+TGG	+	chr3_1:81055826-81055845	None:intergenic	15.0%
!!	ACAAAAATTAAACTTTCATA+GGG	-	chr3_1:81057025-81057044	Msa0379710:CDS	15.0%
!!!	ATATTTGAAGTTTTTATTGT+GGG	-	chr3_1:81057499-81057518	Msa0379710:intron	15.0%
!!!	TATTTTCAGAAGAATAATAT+TGG	+	chr3_1:81057745-81057764	None:intergenic	15.0%
!!	AATCAAAGATCAAGTATTAT+GGG	+	chr3_1:81056251-81056270	None:intergenic	20.0%
!!	CAACGAGAATTATATTAAAT+CGG	-	chr3_1:81056791-81056810	Msa0379710:CDS	20.0%
!!	GACAAAAATTAAACTTTCAT+AGG	-	chr3_1:81057024-81057043	Msa0379710:CDS	20.0%
!!!	TATTTGCTTTCTTTTTTAAG+TGG	-	chr3_1:81057106-81057125	Msa0379710:CDS	20.0%
!!!	GATATTTGAAGTTTTTATTG+TGG	-	chr3_1:81057498-81057517	Msa0379710:intron	20.0%
!!!	GATAATTTGTATGCAGTTTT+TGG	+	chr3_1:81056031-81056050	None:intergenic	25.0%
!!!	ATATAAAATAGAAGCATTGG+TGG	+	chr3_1:81056227-81056246	None:intergenic	25.0%
!!	GGAATATAAAATAGAAGCAT+TGG	+	chr3_1:81056230-81056249	None:intergenic	25.0%
!	CAATCAAAGATCAAGTATTA+TGG	+	chr3_1:81056252-81056271	None:intergenic	25.0%
!!!	TGATCTTTGATTGTTTTGAA+TGG	-	chr3_1:81056280-81056299	Msa0379710:CDS	25.0%
!!!	GATCTTTGATTGTTTTGAAT+GGG	-	chr3_1:81056281-81056300	Msa0379710:CDS	25.0%
!	TTTCAGTTATGATTCATACT+CGG	-	chr3_1:81056555-81056574	Msa0379710:CDS	25.0%
!!	TTTGAAAATTGACTCTAGTA+AGG	-	chr3_1:81056717-81056736	Msa0379710:CDS	25.0%
!	CGATTTAATATAATTCTCGT+TGG	+	chr3_1:81056793-81056812	None:intergenic	25.0%
!	ACAAGTAAATAGTTTATCCT+TGG	-	chr3_1:81056826-81056845	Msa0379710:CDS	25.0%
!	ATGTGAAAAATAATCTGCAA+CGG	+	chr3_1:81057462-81057481	None:intergenic	25.0%
!	CATCTCATTATAAACTATCA+AGG	+	chr3_1:81057846-81057865	None:intergenic	25.0%
!	ACTGTTGCATATTATATTTG+AGG	-	chr3_1:81057873-81057892	Msa0379710:intron	25.0%
!	TATCTAGTGAAAATCGAATA+GGG	+	chr3_1:81057901-81057920	None:intergenic	25.0%
!	ATATCTAGTGAAAATCGAAT+AGG	+	chr3_1:81057902-81057921	None:intergenic	25.0%
!	TATGAATACAGAACTTAGTA+AGG	+	chr3_1:81057930-81057949	None:intergenic	25.0%
!!!	TCTGGTTCTGATTATTTTAA+TGG	-	chr3_1:81057982-81058001	Msa0379710:intron	25.0%
!!	AATTTTTCATGACTTCTGAA+GGG	+	chr3_1:81058527-81058546	None:intergenic	25.0%
!	GATTATTCAAAACAAATGAC+TGG	+	chr3_1:81059526-81059545	None:intergenic	25.0%
!!!	AATCAAGAGAATTTTGAAAG+TGG	-	chr3_1:81059542-81059561	Msa0379710:five_prime_UTR	25.0%
!!!	ATCAAGAGAATTTTGAAAGT+GGG	-	chr3_1:81059543-81059562	Msa0379710:five_prime_UTR	25.0%
!	AATCCAAAGAGATCAATATT+GGG	-	chr3_1:81059582-81059601	Msa0379710:five_prime_UTR	25.0%
!	CACTTTTCATAGAATCACAA+CGG	-	chr3_1:81055946-81055965	Msa0379710:CDS	30.0%
	GAGAATAATAGTTAGTACCT+TGG	+	chr3_1:81056122-81056141	None:intergenic	30.0%
!	CTTTTTCTTTTACTTTCCCA+GGG	-	chr3_1:81056145-81056164	Msa0379710:CDS	30.0%
	TGATTCATCTTATAGAGTGA+TGG	-	chr3_1:81056418-81056437	Msa0379710:CDS	30.0%
!	TATAGAGTGATGGAAGATAA+AGG	-	chr3_1:81056428-81056447	Msa0379710:CDS	30.0%
!	ATAGAGTGATGGAAGATAAA+GGG	-	chr3_1:81056429-81056448	Msa0379710:CDS	30.0%
!!	CTTTTTGGTCTTTAACCTTT+TGG	-	chr3_1:81056522-81056541	Msa0379710:CDS	30.0%
	TGAAACAATTACAGACCAAA+AGG	+	chr3_1:81056540-81056559	None:intergenic	30.0%
	TTCAGTTATGATTCATACTC+GGG	-	chr3_1:81056556-81056575	Msa0379710:CDS	30.0%
!	GTGAACGATTATTTCTTAAC+TGG	-	chr3_1:81056583-81056602	Msa0379710:CDS	30.0%
	ACTACTTAAGTTCAATCACT+TGG	-	chr3_1:81056615-81056634	Msa0379710:CDS	30.0%
!	AAAATTGACTCTAGTAAGGA+GGG	-	chr3_1:81056721-81056740	Msa0379710:CDS	30.0%
	CTCTCTAAATGTCTAACTAT+TGG	+	chr3_1:81056769-81056788	None:intergenic	30.0%
	TAAATAGTTTATCCTTGGAC+AGG	-	chr3_1:81056831-81056850	Msa0379710:CDS	30.0%
	AAATAGTTTATCCTTGGACA+GGG	-	chr3_1:81056832-81056851	Msa0379710:CDS	30.0%
	ACCTTAGAGAAAACCTAAAT+CGG	+	chr3_1:81056986-81057005	None:intergenic	30.0%
	AAATTAAACTTTCATAGGGC+AGG	-	chr3_1:81057029-81057048	Msa0379710:CDS	30.0%
	TTAAGTCAGATGTTGAATGA+AGG	+	chr3_1:81057068-81057087	None:intergenic	30.0%
!!!	TGCTTTCTTTTTTAAGTGGT+AGG	-	chr3_1:81057110-81057129	Msa0379710:CDS	30.0%
	TGTATGAAACTACTAAGGAA+GGG	-	chr3_1:81057204-81057223	Msa0379710:CDS	30.0%
	CAGTGATTATGAATGATGTT+CGG	-	chr3_1:81057255-81057274	Msa0379710:CDS	30.0%
	TTGTAAAGACTACTTACAAC+AGG	+	chr3_1:81057392-81057411	None:intergenic	30.0%
	AAGTTGAAAGTAGAAAAGAC+AGG	+	chr3_1:81057532-81057551	None:intergenic	30.0%
	TTAGCTAATCAACGTAAAGA+TGG	+	chr3_1:81057576-81057595	None:intergenic	30.0%
!	TCTTTACGTTGATTAGCTAA+TGG	-	chr3_1:81057576-81057595	Msa0379710:intron	30.0%
!!	CATTGTTTTGTTGATGTGAT+TGG	-	chr3_1:81057639-81057658	Msa0379710:intron	30.0%
!	GCGAGTTATTGTATATTTTC+TGG	-	chr3_1:81057964-81057983	Msa0379710:intron	30.0%
	ATTGTGCAAGAATTTACTTC+AGG	-	chr3_1:81058029-81058048	Msa0379710:intron	30.0%
	TCTAAGAAATCACGCTTTAA+AGG	-	chr3_1:81058348-81058367	Msa0379710:intron	30.0%
!	CTAAGAAATCACGCTTTAAA+GGG	-	chr3_1:81058349-81058368	Msa0379710:intron	30.0%
	ATTTCTATGTGGTTTCTTCT+TGG	+	chr3_1:81058382-81058401	None:intergenic	30.0%
	ATGGAGCAAAGATCAATAAT+GGG	-	chr3_1:81058436-81058455	Msa0379710:intron	30.0%
!	GAATTTTTCATGACTTCTGA+AGG	+	chr3_1:81058528-81058547	None:intergenic	30.0%
!	GTCATGAAAAATTCTGAGAA+CGG	-	chr3_1:81058534-81058553	Msa0379710:intron	30.0%
	TCCATTATCATAATACTGCA+TGG	+	chr3_1:81058640-81058659	None:intergenic	30.0%
	TGCAATAAAGGAAGTCAAAT+CGG	-	chr3_1:81058902-81058921	Msa0379710:intron	30.0%
	AATTCTTCATGACTTCTGAA+AGG	+	chr3_1:81059460-81059479	None:intergenic	30.0%
	CAATCCAAAGAGATCAATAT+TGG	-	chr3_1:81059581-81059600	Msa0379710:five_prime_UTR	30.0%
	ATTCCCAATATTGATCTCTT+TGG	+	chr3_1:81059588-81059607	None:intergenic	30.0%
	ATGAACAAACAGAATTGCAA+TGG	-	chr3_1:81059665-81059684	Msa0379710:five_prime_UTR	30.0%
	TGAGAACAAAGTTGTGTGTA+CGG	+	chr3_1:81055995-81056014	None:intergenic	35.0%
	GATGAAATTGAAGAGTGGTT+GGG	+	chr3_1:81056057-81056076	None:intergenic	35.0%
	AGATGAAATTGAAGAGTGGT+TGG	+	chr3_1:81056058-81056077	None:intergenic	35.0%
	GAGAAGATGAAATTGAAGAG+TGG	+	chr3_1:81056062-81056081	None:intergenic	35.0%
	CCTGGGAAAGTAAAAGAAAA+AGG	+	chr3_1:81056147-81056166	None:intergenic	35.0%
!	CCTTTTTCTTTTACTTTCCC+AGG	-	chr3_1:81056144-81056163	Msa0379710:CDS	35.0%
!!	TAAACTTGTTGCAACGATCT+AGG	-	chr3_1:81056375-81056394	Msa0379710:CDS	35.0%
!	AATCAAGTGTTTCTGTCCTA+GGG	+	chr3_1:81056403-81056422	None:intergenic	35.0%
!	AGTTCAATCACTTGGTTTGA+AGG	-	chr3_1:81056623-81056642	Msa0379710:CDS	35.0%
!	GTTCAATCACTTGGTTTGAA+GGG	-	chr3_1:81056624-81056643	Msa0379710:CDS	35.0%
!	TTCAATCACTTGGTTTGAAG+GGG	-	chr3_1:81056625-81056644	Msa0379710:CDS	35.0%
!	GAAAATTGACTCTAGTAAGG+AGG	-	chr3_1:81056720-81056739	Msa0379710:CDS	35.0%
!!	TAAGGAGGGTTGATGATTAA+CGG	-	chr3_1:81056735-81056754	Msa0379710:CDS	35.0%
!!!	CTTTTTTCACAAAGTTGGGT+CGG	+	chr3_1:81056884-81056903	None:intergenic	35.0%
!!!	GAGCCTTTTTTCACAAAGTT+GGG	+	chr3_1:81056888-81056907	None:intergenic	35.0%
!!!	TGAGCCTTTTTTCACAAAGT+TGG	+	chr3_1:81056889-81056908	None:intergenic	35.0%
	TCCTGAAATAGATGCATTCT+AGG	-	chr3_1:81056927-81056946	Msa0379710:CDS	35.0%
	TCCTAGAATGCATCTATTTC+AGG	+	chr3_1:81056931-81056950	None:intergenic	35.0%
	GCTTCTCAAATCTTACATCT+TGG	+	chr3_1:81056954-81056973	None:intergenic	35.0%
	AAGATTTGAGAAGCAACAAG+TGG	-	chr3_1:81056960-81056979	Msa0379710:CDS	35.0%
	ACCTGTGTATGAAACTACTA+AGG	-	chr3_1:81057199-81057218	Msa0379710:CDS	35.0%
	TCCTTAGTAGTTTCATACAC+AGG	+	chr3_1:81057203-81057222	None:intergenic	35.0%
	GTGTATGAAACTACTAAGGA+AGG	-	chr3_1:81057203-81057222	Msa0379710:CDS	35.0%
	TTCACATTTCTTCAGCTCAT+TGG	-	chr3_1:81057475-81057494	Msa0379710:intron	35.0%
	TCACATTTCTTCAGCTCATT+GGG	-	chr3_1:81057476-81057495	Msa0379710:intron	35.0%
	CTACTTTCAACTTTCAAGAG+TGG	-	chr3_1:81057539-81057558	Msa0379710:intron	35.0%
	GTTCTTAGTATGCAACAGTT+TGG	-	chr3_1:81057612-81057631	Msa0379710:intron	35.0%
!	TCCTTTTTGCTCTGATACAA+TGG	+	chr3_1:81058084-81058103	None:intergenic	35.0%
	TCAACCGTACACGAATATAA+TGG	+	chr3_1:81058129-81058148	None:intergenic	35.0%
	AGGAACAGCAAAAACAAAGA+GGG	-	chr3_1:81058173-81058192	Msa0379710:CDS	35.0%
	AAGCGTGATTTCTTAGACTT+CGG	+	chr3_1:81058345-81058364	None:intergenic	35.0%
	CAGCATTGTCAGTGTTAATA+CGG	+	chr3_1:81058413-81058432	None:intergenic	35.0%
	GATGGAGCAAAGATCAATAA+TGG	-	chr3_1:81058435-81058454	Msa0379710:intron	35.0%
	TGGAGCAAAGATCAATAATG+GGG	-	chr3_1:81058437-81058456	Msa0379710:intron	35.0%
	GCCATGCAGTATTATGATAA+TGG	-	chr3_1:81058636-81058655	Msa0379710:intron	35.0%
	AGAGACATTAGCTGCAATAA+AGG	-	chr3_1:81058890-81058909	Msa0379710:intron	35.0%
!	TTCAGATTTGATTTCCTGGA+TGG	+	chr3_1:81058496-81058515	None:intergenic	35.0%
!	TTCAGATTTGATTTCCTGGA+TGG	+	chr3_1:81058496-81058515	None:intergenic	35.0%
!	GCCATGACAAATTCTGAAAA+CGG	-	chr3_1:81059263-81059282	Msa0379710:intron	35.0%
!	TCCGTTTTCAGAATTTGTCA+TGG	+	chr3_1:81059267-81059286	None:intergenic	35.0%
	TCAGAAGTCATGAAGAATTC+TGG	-	chr3_1:81059461-81059480	Msa0379710:five_prime_UTR	35.0%
	CAGAAGTCATGAAGAATTCT+GGG	-	chr3_1:81059462-81059481	Msa0379710:five_prime_UTR	35.0%
	ACAGAATTGCAATGGAGATA+TGG	-	chr3_1:81059673-81059692	Msa0379710:five_prime_UTR	35.0%
	TGAAGTGTGAGATTAGTGTC+AGG	+	chr3_1:81055765-81055784	None:intergenic	40.0%
	TTGGAAATCTTCGTTAGTGG+TGG	+	chr3_1:81056103-81056122	None:intergenic	40.0%
	ACCACTAACGAAGATTTCCA+AGG	-	chr3_1:81056102-81056121	Msa0379710:CDS	40.0%
	ACCTTGGAAATCTTCGTTAG+TGG	+	chr3_1:81056106-81056125	None:intergenic	40.0%
!	GAATCAAGTGTTTCTGTCCT+AGG	+	chr3_1:81056404-81056423	None:intergenic	40.0%
	TGGAGGGAGGAAAAAAAATG+AGG	-	chr3_1:81056464-81056483	Msa0379710:CDS	40.0%
	GGAGGGAGGAAAAAAAATGA+GGG	-	chr3_1:81056465-81056484	Msa0379710:CDS	40.0%
!	GAGGGGTCAGAATTTCTTTT+TGG	-	chr3_1:81056507-81056526	Msa0379710:CDS	40.0%
	CGACCCAACTTTGTGAAAAA+AGG	-	chr3_1:81056882-81056901	Msa0379710:CDS	40.0%
	CTTTGTGAAAAAAGGCTCAG+TGG	-	chr3_1:81056890-81056909	Msa0379710:CDS	40.0%
!!	GCCGATTTAGGTTTTCTCTA+AGG	-	chr3_1:81056982-81057001	Msa0379710:CDS	40.0%
	TCTGTGCATACTCTTGCAAT+TGG	+	chr3_1:81057163-81057182	None:intergenic	40.0%
	TGACCTGAAAGAAGGTTCAT+GGG	+	chr3_1:81057234-81057253	None:intergenic	40.0%
	TTGACCTGAAAGAAGGTTCA+TGG	+	chr3_1:81057235-81057254	None:intergenic	40.0%
	ATCACTGTTGACCTGAAAGA+AGG	+	chr3_1:81057242-81057261	None:intergenic	40.0%
	GTTCGGTATGATTCTTTGAC+TGG	-	chr3_1:81057272-81057291	Msa0379710:CDS	40.0%
	TTGATGGAGTTGGCTAAAAC+TGG	-	chr3_1:81057341-81057360	Msa0379710:CDS	40.0%
!!	TAATATTGGTGACGAGCTCA+CGG	+	chr3_1:81057731-81057750	None:intergenic	40.0%
!	GTTTTCTTCCAGCATGAAAC+TGG	-	chr3_1:81058006-81058025	Msa0379710:intron	40.0%
	GCCATTGTATCAGAGCAAAA+AGG	-	chr3_1:81058080-81058099	Msa0379710:CDS	40.0%
	GGCACCATTATATTCGTGTA+CGG	-	chr3_1:81058122-81058141	Msa0379710:CDS	40.0%
	TATTCGTGTACGGTTGACAT+TGG	-	chr3_1:81058132-81058151	Msa0379710:CDS	40.0%
	ATTGGAGGGATGCTCTATAT+TGG	-	chr3_1:81058150-81058169	Msa0379710:CDS	40.0%
	GAGGAACAGCAAAAACAAAG+AGG	-	chr3_1:81058172-81058191	Msa0379710:CDS	40.0%
	AGCTAATAAAGCAGTTCTCG+CGG	+	chr3_1:81058214-81058233	None:intergenic	40.0%
!!!	AAACTGGTTTTCAGAAGCCT+GGG	+	chr3_1:81058253-81058272	None:intergenic	40.0%
	TGTCATTCCATCCCGAAAAA+GGG	-	chr3_1:81058284-81058303	Msa0379710:CDS	40.0%
	CGTATTAACACTGACAATGC+TGG	-	chr3_1:81058411-81058430	Msa0379710:intron	40.0%
!	CAATAATGGGGAAGAATCAC+TGG	-	chr3_1:81058449-81058468	Msa0379710:intron	40.0%
	GCAAGTGCTAATGATGAATC+TGG	-	chr3_1:81058471-81058490	Msa0379710:intron	40.0%
!	CTTCAGATTTGATTTCCTGG+AGG	+	chr3_1:81058497-81058516	None:intergenic	40.0%
!	CTGCTTCAGATTTGATTTCC+TGG	+	chr3_1:81058500-81058519	None:intergenic	40.0%
	CATGAGAAAGAGACATTAGC+TGG	-	chr3_1:81058573-81058592	Msa0379710:intron	40.0%
!	CTTCAGATTTGATTTCCTGG+AGG	+	chr3_1:81058497-81058516	None:intergenic	40.0%
!	CTGCTTCAGATTTGATTTCC+TGG	+	chr3_1:81058500-81058519	None:intergenic	40.0%
	CATGAGAAAGAGACATTAGC+TGG	-	chr3_1:81058573-81058592	Msa0379710:intron	40.0%
	GAATTCTTCATGGCTTCTGA+AGG	+	chr3_1:81058732-81058751	None:intergenic	40.0%
!	GCCATGAAGAATTCTGAGAA+CGG	-	chr3_1:81058738-81058757	Msa0379710:intron	40.0%
	TCCGTTCTCAGAATTCTTCA+TGG	+	chr3_1:81058742-81058761	None:intergenic	40.0%
	CATGAGAAAGAGACATTAGC+TGG	-	chr3_1:81058573-81058592	Msa0379710:intron	40.0%
!	CTTCAGATTTAACTTCCTGG+AGG	+	chr3_1:81058803-81058822	None:intergenic	40.0%
!	CTGCTTCAGATTTAACTTCC+TGG	+	chr3_1:81058806-81058825	None:intergenic	40.0%
!	TTCAGATTTGACTTCCTGGA+TGG	+	chr3_1:81059012-81059031	None:intergenic	40.0%
!	CTGCTTCAGATTTGATTTCC+TGG	+	chr3_1:81058500-81058519	None:intergenic	40.0%
!	CTGCTTCAGATTTGATTTCC+TGG	+	chr3_1:81058500-81058519	None:intergenic	40.0%
	TTGTCATGGCTTCATCTGAA+GGG	+	chr3_1:81059253-81059272	None:intergenic	40.0%
	TTTGTCATGGCTTCATCTGA+AGG	+	chr3_1:81059254-81059273	None:intergenic	40.0%
!	CTGCTTCAGATTTGATTTCC+TGG	+	chr3_1:81058500-81058519	None:intergenic	40.0%
	AATTCGTCATGGCTTCTGAA+CGG	+	chr3_1:81059358-81059377	None:intergenic	40.0%
	TCTGTTCTCAGAATTCGTCA+TGG	+	chr3_1:81059369-81059388	None:intergenic	40.0%
	CATGAGAAAGAGACATTAGC+TGG	-	chr3_1:81058573-81058592	Msa0379710:intron	40.0%
!	CTGCTTCAGATTTGATTTCC+TGG	+	chr3_1:81058500-81058519	None:intergenic	40.0%
	ACAAAGTTGTGTGTACGGTG+AGG	+	chr3_1:81055990-81056009	None:intergenic	45.0%
!!	ATCTTCGTTAGTGGTGGACA+TGG	+	chr3_1:81056097-81056116	None:intergenic	45.0%
	GCGTTGCAAAAACAAACCCT+GGG	+	chr3_1:81056164-81056183	None:intergenic	45.0%
	TGCGTTGCAAAAACAAACCC+TGG	+	chr3_1:81056165-81056184	None:intergenic	45.0%
!	GTGATGGAAGATAAAGGGAG+TGG	-	chr3_1:81056434-81056453	Msa0379710:CDS	45.0%
	ATGGAAGATAAAGGGAGTGG+AGG	-	chr3_1:81056437-81056456	Msa0379710:CDS	45.0%
	TGGAAGATAAAGGGAGTGGA+GGG	-	chr3_1:81056438-81056457	Msa0379710:CDS	45.0%
!!!	AGGGATTCCCTCACTTTTTG+TGG	-	chr3_1:81056484-81056503	Msa0379710:CDS	45.0%
!!!	GGGATTCCCTCACTTTTTGT+GGG	-	chr3_1:81056485-81056504	Msa0379710:CDS	45.0%
!!!	ATTCCCTCACTTTTTGTGGG+AGG	-	chr3_1:81056488-81056507	Msa0379710:CDS	45.0%
!!!	TTCCCTCACTTTTTGTGGGA+GGG	-	chr3_1:81056489-81056508	Msa0379710:CDS	45.0%
!	AATCACTTGGTTTGAAGGGG+TGG	-	chr3_1:81056628-81056647	Msa0379710:CDS	45.0%
!	TATCCTTGGACAGGGTTTTG+TGG	-	chr3_1:81056840-81056859	Msa0379710:CDS	45.0%
!	AAGCAACAAGTGGCCGATTT+AGG	-	chr3_1:81056970-81056989	Msa0379710:CDS	45.0%
!	CAAGAGTATGCACAGAAAGC+AGG	-	chr3_1:81057167-81057186	Msa0379710:CDS	45.0%
	TATGCACAGAAAGCAGGACT+TGG	-	chr3_1:81057173-81057192	Msa0379710:CDS	45.0%
	CTGAAAGAAGGTTCATGGGA+AGG	+	chr3_1:81057230-81057249	None:intergenic	45.0%
	CTTCCCATGAACCTTCTTTC+AGG	-	chr3_1:81057228-81057247	Msa0379710:CDS	45.0%
!	AGAGGTTGCTTTGATGGAGT+TGG	-	chr3_1:81057331-81057350	Msa0379710:CDS	45.0%
!!	AATATTGGTGACGAGCTCAC+GGG	+	chr3_1:81057730-81057749	None:intergenic	45.0%
	TGCACAATCCAGTTTCATGC+TGG	+	chr3_1:81058017-81058036	None:intergenic	45.0%
	AAAAAGGATGACACACCACC+AGG	-	chr3_1:81058096-81058115	Msa0379710:CDS	45.0%
	GAATATAATGGTGCCCTACC+TGG	+	chr3_1:81058117-81058136	None:intergenic	45.0%
	TATCCAGACAAATGCATCCC+AGG	-	chr3_1:81058233-81058252	Msa0379710:CDS	45.0%
!!!	CAAACTGGTTTTCAGAAGCC+TGG	+	chr3_1:81058254-81058273	None:intergenic	45.0%
!	CAGGCTTCTGAAAACCAGTT+TGG	-	chr3_1:81058252-81058271	Msa0379710:CDS	45.0%
	TGACAGTCAAATGGCCAAAC+TGG	+	chr3_1:81058269-81058288	None:intergenic	45.0%
	GGGATGGAATGACAGTCAAA+TGG	+	chr3_1:81058278-81058297	None:intergenic	45.0%
	CTGTCATTCCATCCCGAAAA+AGG	-	chr3_1:81058283-81058302	Msa0379710:CDS	45.0%
!	TGGATTCCGTTGCCCTTTTT+CGG	+	chr3_1:81058299-81058318	None:intergenic	45.0%
	AACGGAATCCATTGCTGATG+AGG	-	chr3_1:81058308-81058327	Msa0379710:CDS	45.0%
	TTTCGAAGCCTCATCAGCAA+TGG	+	chr3_1:81058319-81058338	None:intergenic	45.0%
!!	CGGCGCTTCTTATTTCTATG+TGG	+	chr3_1:81058393-81058412	None:intergenic	45.0%
	AACACTGACAATGCTGGTGA+TGG	-	chr3_1:81058417-81058436	Msa0379710:intron	45.0%
	TAATGATGAATCTGGCCTCC+AGG	-	chr3_1:81058479-81058498	Msa0379710:intron	45.0%
!	ATCTGAAGCAGCATTCCCTT+CGG	-	chr3_1:81058509-81058528	Msa0379710:intron	45.0%
	AATACTGCATGGCTTCCGAA+GGG	+	chr3_1:81058629-81058648	None:intergenic	45.0%
	TAATACTGCATGGCTTCCGA+AGG	+	chr3_1:81058630-81058649	None:intergenic	45.0%
	GAATTCTGCATGGCTTCATC+TGG	+	chr3_1:81058837-81058856	None:intergenic	45.0%
!	GCCATGCAGAATTCTGAGAA+CGG	-	chr3_1:81058843-81058862	Msa0379710:intron	45.0%
	TCCGTTCTCAGAATTCTGCA+TGG	+	chr3_1:81058847-81058866	None:intergenic	45.0%
	TCTGCATGGCTTCATCTGAA+GGG	+	chr3_1:81058938-81058957	None:intergenic	45.0%
	TTCTGCATGGCTTCATCTGA+AGG	+	chr3_1:81058939-81058958	None:intergenic	45.0%
!	GCCATGCAGAATTCTGAGAA+CGG	-	chr3_1:81058843-81058862	Msa0379710:intron	45.0%
	TCCGTTCTCAGAATTCTGCA+TGG	+	chr3_1:81058847-81058866	None:intergenic	45.0%
	AGAAACATTAGCTGCCATCC+AGG	-	chr3_1:81058995-81059014	Msa0379710:intron	45.0%
!	CTGCTTCAGATTTGACTTCC+TGG	+	chr3_1:81059016-81059035	None:intergenic	45.0%
	TCTGCATGGCTTCATCTGAA+GGG	+	chr3_1:81058938-81058957	None:intergenic	45.0%
	TTCTGCATGGCTTCATCTGA+AGG	+	chr3_1:81058939-81058958	None:intergenic	45.0%
!	GCCATGCAGAATTCTGAGAA+CGG	-	chr3_1:81058843-81058862	Msa0379710:intron	45.0%
!	CCATGCAGAATTCTGAGAAC+GGG	-	chr3_1:81058844-81058863	Msa0379710:intron	45.0%
!	CATGCAGAATTCTGAGAACG+GGG	-	chr3_1:81058845-81058864	Msa0379710:intron	45.0%
	TTCTGCATCGCTTCATCTGA+AGG	+	chr3_1:81059149-81059168	None:intergenic	45.0%
!	GCGATGCAGAATTCTGAGAA+CGG	-	chr3_1:81059158-81059177	Msa0379710:intron	45.0%
!	CGATGCAGAATTCTGAGAAC+GGG	-	chr3_1:81059159-81059178	Msa0379710:intron	45.0%
!	GATGCAGAATTCTGAGAACG+GGG	-	chr3_1:81059160-81059179	Msa0379710:intron	45.0%
	ATCGCCAATATGTATCCCTC+GGG	+	chr3_1:81059635-81059654	None:intergenic	45.0%
	CATCGCCAATATGTATCCCT+CGG	+	chr3_1:81059636-81059655	None:intergenic	45.0%
	ATACATATTGGCGATGAGCG+TGG	-	chr3_1:81059640-81059659	Msa0379710:five_prime_UTR	45.0%
	TGCAATGGAGATATGGTCTC+TGG	-	chr3_1:81059680-81059699	Msa0379710:five_prime_UTR	45.0%
	TGCAACGATCTAGGAACCCT+AGG	-	chr3_1:81056384-81056403	Msa0379710:CDS	50.0%
	ATAAAGGGAGTGGAGGGCTT+TGG	-	chr3_1:81056444-81056463	Msa0379710:CDS	50.0%
!!!	TCCCTCACTTTTTGTGGGAG+GGG	-	chr3_1:81056490-81056509	Msa0379710:CDS	50.0%
	ACCCCTCCCACAAAAAGTGA+GGG	+	chr3_1:81056494-81056513	None:intergenic	50.0%
	AAGCCACAAAACCCTGTCCA+AGG	+	chr3_1:81056846-81056865	None:intergenic	50.0%
!	AGCTGCAGAGGTTGCTTTGA+TGG	-	chr3_1:81057325-81057344	Msa0379710:CDS	50.0%
	TCTGCAACGGTCACTACACT+CGG	+	chr3_1:81057449-81057468	None:intergenic	50.0%
	TATAATGGTGCCCTACCTGG+TGG	+	chr3_1:81058114-81058133	None:intergenic	50.0%
	TCGTGTACGGTTGACATTGG+AGG	-	chr3_1:81058135-81058154	Msa0379710:CDS	50.0%
	CGTGTACGGTTGACATTGGA+GGG	-	chr3_1:81058136-81058155	Msa0379710:CDS	50.0%
	GGAGGGATGCTCTATATTGG+AGG	-	chr3_1:81058153-81058172	Msa0379710:CDS	50.0%
	AAGCCTGGGATGCATTTGTC+TGG	+	chr3_1:81058239-81058258	None:intergenic	50.0%
	TCCATCCCGAAAAAGGGCAA+CGG	-	chr3_1:81058290-81058309	Msa0379710:CDS	50.0%
!	GGATTCCGTTGCCCTTTTTC+GGG	+	chr3_1:81058298-81058317	None:intergenic	50.0%
!	CTCCAGATTTGACTTCCTGG+AGG	+	chr3_1:81058701-81058720	None:intergenic	50.0%
!	CTGCTCCAGATTTGACTTCC+TGG	+	chr3_1:81058704-81058723	None:intergenic	50.0%
	TCTGCATGGCTTCATCTGGA+GGG	+	chr3_1:81058833-81058852	None:intergenic	50.0%
	TTCTGCATGGCTTCATCTGG+AGG	+	chr3_1:81058834-81058853	None:intergenic	50.0%
	CCCGTTCTCAGAATTCTGCA+TGG	+	chr3_1:81059057-81059076	None:intergenic	50.0%
	AGAGACGTTAGCTACCATCC+AGG	-	chr3_1:81059100-81059119	Msa0379710:intron	50.0%
	AGAGACATTAGCTGCCATCC+AGG	-	chr3_1:81059205-81059224	Msa0379710:intron	50.0%
	AGAGACATTAGCTGCAGTCC+AGG	-	chr3_1:81059310-81059329	Msa0379710:intron	50.0%
	AGAGACATTAGCTGGCATCC+AGG	-	chr3_1:81059412-81059431	Msa0379710:five_prime_UTR	50.0%
!!	AGAAGTGTCATTTGCTCCCG+AGG	-	chr3_1:81059616-81059635	Msa0379710:five_prime_UTR	50.0%
!!	GAAGTGTCATTTGCTCCCGA+GGG	-	chr3_1:81059617-81059636	Msa0379710:five_prime_UTR	50.0%
	TGCTCCCGAGGGATACATAT+TGG	-	chr3_1:81059628-81059647	Msa0379710:five_prime_UTR	50.0%
!!	AGTGGTGGACATGGTGAGAG+AGG	+	chr3_1:81056088-81056107	None:intergenic	55.0%
	GACCCCTCCCACAAAAAGTG+AGG	+	chr3_1:81056495-81056514	None:intergenic	55.0%
	TGACGAGCTCACGGGTAAGA+AGG	+	chr3_1:81057722-81057741	None:intergenic	55.0%
	AGGATGACACACCACCAGGT+AGG	-	chr3_1:81058100-81058119	Msa0379710:CDS	55.0%
	GGATGACACACCACCAGGTA+GGG	-	chr3_1:81058101-81058120	Msa0379710:CDS	55.0%
!!!	TCCGTTGCCCTTTTTCGGGA+TGG	+	chr3_1:81058294-81058313	None:intergenic	55.0%
!	AGAGACATTAGCTGGCCTCC+AGG	-	chr3_1:81058581-81058600	Msa0379710:intron	55.0%
!	AGAGACATTAGCTGGCCTCC+AGG	-	chr3_1:81058581-81058600	Msa0379710:intron	55.0%
	GGCCTCCAGGAAGTCAAATC+TGG	-	chr3_1:81058696-81058715	Msa0379710:intron	55.0%
!	AGAGACATTAGCTGGCCTCC+AGG	-	chr3_1:81058581-81058600	Msa0379710:intron	55.0%
	AACGGCGCAGATTCCGACAC+AGG	-	chr3_1:81055964-81055983	Msa0379710:CDS	60.0%
	GTGTACGGTGAGGCCTGTGT+CGG	+	chr3_1:81055980-81055999	None:intergenic	60.0%
!	AAGGGAGTGGAGGGCTTTGG+AGG	-	chr3_1:81056447-81056466	Msa0379710:CDS	60.0%
!!	AGGGAGTGGAGGGCTTTGGA+GGG	-	chr3_1:81056448-81056467	Msa0379710:CDS	60.0%
	AGCAGAGCAGTCAGCTGCAG+AGG	-	chr3_1:81057313-81057332	Msa0379710:CDS	60.0%
!!	GAGTGGAGGGCTTTGGAGGG+AGG	-	chr3_1:81056451-81056470	Msa0379710:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_1	gene	81055752	81059709	81055752	ID=Msa0379710;Name=Msa0379710
chr3_1	mRNA	81055752	81059709	81055752	ID=Msa0379710-mRNA-1;Parent=Msa0379710;Name=Msa0379710-mRNA-1;_AED=0.00;_eAED=0.00;_QI=344\|1\|0.66\|1\|0.5\|0.66\|3\|0\|662
chr3_1	exon	81055752	81057443	81055752	ID=Msa0379710-mRNA-1:exon:20328;Parent=Msa0379710-mRNA-1
chr3_1	exon	81058067	81058335	81058067	ID=Msa0379710-mRNA-1:exon:20327;Parent=Msa0379710-mRNA-1
chr3_1	exon	81059338	81059709	81059338	ID=Msa0379710-mRNA-1:exon:20326;Parent=Msa0379710-mRNA-1
chr3_1	five_prime_UTR	81059366	81059709	81059366	ID=Msa0379710-mRNA-1:five_prime_utr;Parent=Msa0379710-mRNA-1
chr3_1	CDS	81059338	81059365	81059338	ID=Msa0379710-mRNA-1:cds;Parent=Msa0379710-mRNA-1
chr3_1	CDS	81058067	81058335	81058067	ID=Msa0379710-mRNA-1:cds;Parent=Msa0379710-mRNA-1
chr3_1	CDS	81055752	81057443	81055752	ID=Msa0379710-mRNA-1:cds;Parent=Msa0379710-mRNA-1

Gene Sequence

>Msa0379710

ATGTCCACCACTAACGAAGATTTCCAAGTGGTAGGTGTTTCAAATTGTTATGTGTTCAAGAGCCAATTGCAAGAGTATGCACAGAAAGCAGGACTTGGCACACCTGTGTATGAAACTACTAAGGAAGGGCCTTCCCATGAACCTTCTTTCAGGTCAACAGTGATTATGAATGATGTTCGGTATGATTCTTTGACTGGATTTTTTAATCGTAAAGCAGCAGAGCAGTCAGCTGCAGAGGTTGCTTTGATGGAGTTGGCTAAAACTGGTGAAGTTAATCAGTCTATTACTCAACCTGTTCATGAAACTGGATTGTGCAAGAATTTACTTCAGGAATATGCACAGAAAATGAATTATGCAATGCCATTGTATCAGAGCAAAAAGGATGACACACCACCAGGTAGGGCACCATTATATTCGTGTACGGTTGACATTGGAGGGATGCTCTATATTGGAGGAACAGCAAAAACAAAGAGGGAAGCTGAGATAAAAGCCGCGAGAACTGCTTTATTAGCTATCCAGACAAATGCATCCCAGGCTTCTGAAAACCAGTTTGGCCATTTGACTGTCATTCCATCCCGAAAAAGGGCAACGGAATCCATTGCTGATGAGGCTTCGAAAGCTCCGAAGTCTAAGAAATCACGCTTTAAAGGGAAATATTCCAAGAAGAAACCACATAGAAATAAGAAGCGCCGTATTAACACTGACAATGCTGGTGATGGAGCAAAGATCAATAATGGGGAAGAATCACTGGCAAGTGCTAATGATGAATCTGGCCTCCAGGAAATCAAATCTGAAGCAGCATTCCCTTCAGAAGTCATGAAAAATTCTGAGAACGGAGTATCATCTAATCATCATGAGAAAGAGACATTAGCTGGCCTCCAGGAAATCAAATCTGAAGCAGCATTCCCTTCGGAAGCCATGCAGTATTATGATAATGGAGTATCAACTAATCGTCATGAGAAAGAGACATTAGCTGGCCTCCAGGAAGTCAAATCTGGAGCAGCATTTCCTTCAGAAGCCATGAAGAATTCTGAGAACGGAGCATCAACTAATTATCATGAGAAAGAGACATTAGCTGGCCTCCAGGAAGTTAAATCTGAAGCAGCATTCCCTCCAGATGAAGCCATGCAGAATTCTGAGAACGGAGTGTCAACTAATCATCATGAGAAAGAGACATTAGCTGCAATAAAGGAAGTCAAATCGGAAGCAGCATTCCCTTCAGATGAAGCCATGCAGAATTCTGAGAACGGAGCATCAACTAATTATCATGAGAAAGAAACATTAGCTGCCATCCAGGAAGTCAAATCTGAAGCAGCGTTCCCTTCAGATGAAGCCATGCAGAATTCTGAGAACGGGGTGTCAACTAATCATCATGAGAAAGAGACGTTAGCTACCATCCAGGAAATCAAATCTGAAGCAGCATTGCCTTCAGATGAAGCGATGCAGAATTCTGAGAACGGGGTGTCAACTAATCATCATGAGAAAGAGACATTAGCTGCCATCCAGGAAATCAAATCTGAAGCAGCATTCCCTTCAGATGAAGCCATGACAAATTCTGAAAACGGAGTCTCAACTAATCATCATGAGAAAGAGACATTAGCTGCAGTCCAGGAAATCAAATCTGAAGCAGCATTCCGTTCAGAAGCCATGACGAATTCTGAGAACAGAGTCTCAACTAATCATCATGAGAAAGAGACATTAGCTGGCATCCAGGAAATCAAATCTGAAGCAGCATTCCTTTCAGAAGTCATGAAGAATTCTGGGAGCGATATATCAACTAATCTTCATGAGAAAGAGATGTACCAGTCATTTGTTTTGAATAATCAAGAGAATTTTGAAAGTGGGAAGTTAACAGAATTGCAATCCAAAGAGATCAATATTGGGAATGTTGTCACAGAAGTGTCATTTGCTCCCGAGGGATACATATTGGCGATGAGCGTGGAGATGAACAAACAGAATTGCAATGGAGATATGGTCTCTGGCGAATGA

Protein sequence

>Msa0379710

MSTTNEDFQVVGVSNCYVFKSQLQEYAQKAGLGTPVYETTKEGPSHEPSFRSTVIMNDVRYDSLTGFFNRKAAEQSAAEVALMELAKTGEVNQSITQPVHETGLCKNLLQEYAQKMNYAMPLYQSKKDDTPPGRAPLYSCTVDIGGMLYIGGTAKTKREAEIKAARTALLAIQTNASQASENQFGHLTVIPSRKRATESIADEASKAPKSKKSRFKGKYSKKKPHRNKKRRINTDNAGDGAKINNGEESLASANDESGLQEIKSEAAFPSEVMKNSENGVSSNHHEKETLAGLQEIKSEAAFPSEAMQYYDNGVSTNRHEKETLAGLQEVKSGAAFPSEAMKNSENGASTNYHEKETLAGLQEVKSEAAFPPDEAMQNSENGVSTNHHEKETLAAIKEVKSEAAFPSDEAMQNSENGASTNYHEKETLAAIQEVKSEAAFPSDEAMQNSENGVSTNHHEKETLATIQEIKSEAALPSDEAMQNSENGVSTNHHEKETLAAIQEIKSEAAFPSDEAMTNSENGVSTNHHEKETLAAVQEIKSEAAFRSEAMTNSENRVSTNHHEKETLAGIQEIKSEAAFLSEVMKNSGSDISTNLHEKEMYQSFVLNNQENFESGKLTELQSKEINIGNVVTEVSFAPEGYILAMSVEMNKQNCNGDMVSGE*