Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719180 | XP_013453646.1 | 99.324 | 148 | 1 | 0 | 29 | 176 | 577 | 724 | 1.07e-96 | 305 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719180 | sp|Q8VZF6|EDR2L_ARATH | 87.075 | 147 | 19 | 0 | 29 | 175 | 573 | 719 | 3.08e-86 | 270 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719180 | A0A072UDZ9 | 99.324 | 148 | 1 | 0 | 29 | 176 | 577 | 724 | 5.10e-97 | 305 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0719180 | 0.833312 | 5.731730e-56 | -8.615850e-47 |
| Msa0008200 | Msa0719180 | 0.819978 | 8.743279e-53 | -8.615850e-47 |
| Msa0010490 | Msa0719180 | 0.866574 | 2.581844e-65 | -8.615850e-47 |
| Msa0010500 | Msa0719180 | 0.871945 | 4.640965e-67 | -8.615850e-47 |
| Msa0020390 | Msa0719180 | 0.815627 | 8.392167e-52 | -8.615850e-47 |
| Msa0023480 | Msa0719180 | 0.836672 | 8.159525e-57 | -8.615850e-47 |
| Msa0030300 | Msa0719180 | 0.812075 | 5.086856e-51 | -8.615850e-47 |
| Msa0032470 | Msa0719180 | 0.824047 | 9.972081e-54 | -8.615850e-47 |
| Msa0033110 | Msa0719180 | 0.805636 | 1.213235e-49 | -8.615850e-47 |
| Msa0036540 | Msa0719180 | 0.840352 | 9.156498e-58 | -8.615850e-47 |
| Msa0038870 | Msa0719180 | 0.800477 | 1.415024e-48 | -8.615850e-47 |
| Msa0059950 | Msa0719180 | 0.893228 | 7.638242e-75 | -8.615850e-47 |
| Msa0068020 | Msa0719180 | 0.818152 | 2.275682e-52 | -8.615850e-47 |
| Msa0071250 | Msa0719180 | 0.807128 | 5.879272e-50 | -8.615850e-47 |
| Msa0072420 | Msa0719180 | 0.829955 | 3.852223e-55 | -8.615850e-47 |
| Msa0090550 | Msa0719180 | 0.832822 | 7.591718e-56 | -8.615850e-47 |
| Msa0093010 | Msa0719180 | 0.853680 | 2.036483e-61 | -8.615850e-47 |
| Msa0095360 | Msa0719180 | 0.836820 | 7.478827e-57 | -8.615850e-47 |
| Msa0095770 | Msa0719180 | 0.837584 | 4.769127e-57 | -8.615850e-47 |
| Msa0103790 | Msa0719180 | 0.824940 | 6.148601e-54 | -8.615850e-47 |
| Msa0104230 | Msa0719180 | 0.812073 | 5.093292e-51 | -8.615850e-47 |
| Msa0117660 | Msa0719180 | -0.814319 | 1.636698e-51 | -8.615850e-47 |
| Msa0118540 | Msa0719180 | 0.804733 | 1.874377e-49 | -8.615850e-47 |
| Msa0604290 | Msa0719180 | 0.824339 | 8.517196e-54 | -8.615850e-47 |
| Msa0605510 | Msa0719180 | 0.829819 | 4.159179e-55 | -8.615850e-47 |
| Msa0607690 | Msa0719180 | 0.810757 | 9.835804e-51 | -8.615850e-47 |
| Msa0610130 | Msa0719180 | 0.801738 | 7.814902e-49 | -8.615850e-47 |
| Msa0610180 | Msa0719180 | 0.802615 | 5.158515e-49 | -8.615850e-47 |
| Msa0610250 | Msa0719180 | 0.848406 | 6.253900e-60 | -8.615850e-47 |
| Msa0625700 | Msa0719180 | 0.819012 | 1.452147e-52 | -8.615850e-47 |
| Msa0631350 | Msa0719180 | 0.802509 | 5.424301e-49 | -8.615850e-47 |
| Msa0634890 | Msa0719180 | 0.826906 | 2.098160e-54 | -8.615850e-47 |
| Msa0642970 | Msa0719180 | 0.820611 | 6.260420e-53 | -8.615850e-47 |
| Msa0646470 | Msa0719180 | 0.842899 | 1.950094e-58 | -8.615850e-47 |
| Msa0649220 | Msa0719180 | 0.806676 | 7.326089e-50 | -8.615850e-47 |
| Msa0679360 | Msa0719180 | 0.810023 | 1.416746e-50 | -8.615850e-47 |
| Msa0682680 | Msa0719180 | 0.818606 | 1.795819e-52 | -8.615850e-47 |
| Msa0689320 | Msa0719180 | 0.849844 | 2.490861e-60 | -8.615850e-47 |
| Msa0689440 | Msa0719180 | 0.805111 | 1.562714e-49 | -8.615850e-47 |
| Msa0701100 | Msa0719180 | 0.808055 | 3.737458e-50 | -8.615850e-47 |
| Msa0702700 | Msa0719180 | 0.800619 | 1.323590e-48 | -8.615850e-47 |
| Msa0703440 | Msa0719180 | 0.820301 | 7.373854e-53 | -8.615850e-47 |
| Msa0703810 | Msa0719180 | 0.803226 | 3.856295e-49 | -8.615850e-47 |
| Msa0703910 | Msa0719180 | 0.800224 | 1.593330e-48 | -8.615850e-47 |
| Msa0705990 | Msa0719180 | 0.817070 | 3.990460e-52 | -8.615850e-47 |
| Msa0719180 | Msa0726080 | 0.812431 | 4.253993e-51 | -8.615850e-47 |
| Msa0719180 | Msa0741440 | 0.873524 | 1.375861e-67 | -8.615850e-47 |
| Msa0719180 | Msa0746170 | 0.832645 | 8.399822e-56 | -8.615850e-47 |
| Msa0719180 | Msa0746210 | 0.839626 | 1.415884e-57 | -8.615850e-47 |
| Msa0719180 | Msa0747630 | 0.801989 | 6.940146e-49 | -8.615850e-47 |
| Msa0719180 | Msa0748170 | 0.806933 | 6.466168e-50 | -8.615850e-47 |
| Msa0719180 | Msa0750850 | 0.823584 | 1.280556e-53 | -8.615850e-47 |
| Msa0719180 | Msa0769970 | 0.829471 | 5.053269e-55 | -8.615850e-47 |
| Msa0719180 | Msa0784480 | 0.809163 | 2.167413e-50 | -8.615850e-47 |
| Msa0719180 | Msa0786750 | 0.821353 | 4.225038e-53 | -8.615850e-47 |
| Msa0719180 | Msa0800370 | 0.843049 | 1.779635e-58 | -8.615850e-47 |
| Msa0719180 | Msa0822310 | -0.811530 | 6.685758e-51 | -8.615850e-47 |
| Msa0719180 | Msa0822500 | 0.858526 | 7.754535e-63 | -8.615850e-47 |
| Msa0719180 | Msa0827280 | 0.809427 | 1.902680e-50 | -8.615850e-47 |
| Msa0719180 | Msa0829220 | 0.815361 | 9.614688e-52 | -8.615850e-47 |
| Msa0719180 | Msa0831100 | 0.802699 | 4.956766e-49 | -8.615850e-47 |
| Msa0719180 | Msa0833190 | -0.801367 | 9.311058e-49 | -8.615850e-47 |
| Msa0719180 | Msa0838370 | 0.806219 | 9.148352e-50 | -8.615850e-47 |
| Msa0719180 | Msa0844280 | 0.809341 | 1.984911e-50 | -8.615850e-47 |
| Msa0719180 | Msa0846230 | 0.817594 | 3.041618e-52 | -8.615850e-47 |
| Msa0719180 | Msa0861470 | 0.821198 | 4.587311e-53 | -8.615850e-47 |
| Msa0719180 | Msa0861570 | 0.820002 | 8.630885e-53 | -8.615850e-47 |
| Msa0719180 | Msa0863160 | 0.801724 | 7.866867e-49 | -8.615850e-47 |
| Msa0719180 | Msa0865030 | 0.853007 | 3.175350e-61 | -8.615850e-47 |
| Msa0719180 | Msa0867520 | -0.815426 | 9.303545e-52 | -8.615850e-47 |
| Msa0719180 | Msa0877710 | 0.802513 | 5.413942e-49 | -8.615850e-47 |
| Msa0719180 | Msa0878220 | 0.815040 | 1.133482e-51 | -8.615850e-47 |
| Msa0719180 | Msa0880810 | 0.817324 | 3.498368e-52 | -8.615850e-47 |
| Msa0719180 | Msa0894710 | 0.807518 | 4.860389e-50 | -8.615850e-47 |
| Msa0719180 | Msa0944200 | 0.821667 | 3.573608e-53 | -8.615850e-47 |
| Msa0719180 | Msa0958000 | 0.804478 | 2.119338e-49 | -8.615850e-47 |
| Msa0719180 | Msa0974950 | 0.861695 | 8.563623e-64 | -8.615850e-47 |
| Msa0719180 | Msa0980540 | 0.834964 | 2.209895e-56 | -8.615850e-47 |
| Msa0719180 | Msa0985180 | 0.812686 | 3.742572e-51 | -8.615850e-47 |
| Msa0719180 | Msa0994370 | 0.817904 | 2.589103e-52 | -8.615850e-47 |
| Msa0719180 | Msa1037520 | 0.826056 | 3.344415e-54 | -8.615850e-47 |
| Msa0719180 | Msa1039900 | 0.820065 | 8.349179e-53 | -8.615850e-47 |
| Msa0719180 | Msa1042660 | 0.829162 | 6.006639e-55 | -8.615850e-47 |
| Msa0719180 | Msa1059470 | 0.849308 | 3.514512e-60 | -8.615850e-47 |
| Msa0719180 | Msa1063420 | 0.821914 | 3.133943e-53 | -8.615850e-47 |
| Msa0719180 | Msa1071320 | 0.825814 | 3.817303e-54 | -8.615850e-47 |
| Msa0719180 | Msa1081790 | -0.833796 | 4.340754e-56 | -8.615850e-47 |
| Msa0719180 | Msa1089320 | 0.834533 | 2.837306e-56 | -8.615850e-47 |
| Msa0719180 | Msa1089460 | 0.816719 | 4.782754e-52 | -8.615850e-47 |
| Msa0719180 | Msa1096070 | 0.822996 | 1.756414e-53 | -8.615850e-47 |
| Msa0719180 | Msa1114590 | 0.822379 | 2.444680e-53 | -8.615850e-47 |
| Msa0719180 | Msa1126830 | 0.803005 | 4.285353e-49 | -8.615850e-47 |
| Msa0719180 | Msa1128280 | 0.811742 | 6.013698e-51 | -8.615850e-47 |
| Msa0719180 | Msa1131490 | 0.812701 | 3.713001e-51 | -8.615850e-47 |
| Msa0719180 | Msa1133230 | 0.844263 | 8.422712e-59 | -8.615850e-47 |
| Msa0719180 | Msa1133250 | 0.803907 | 2.786662e-49 | -8.615850e-47 |
| Msa0719180 | Msa1158640 | -0.860984 | 1.410609e-63 | -8.615850e-47 |
| Msa0719180 | Msa1165270 | 0.817522 | 3.157073e-52 | -8.615850e-47 |
| Msa0719180 | Msa1165780 | 0.814687 | 1.357095e-51 | -8.615850e-47 |
| Msa0719180 | Msa1166090 | -0.825887 | 3.667882e-54 | -8.615850e-47 |
| Msa0719180 | Msa1176720 | 0.841135 | 5.709681e-58 | -8.615850e-47 |
| Msa0719180 | Msa1178580 | 0.852493 | 4.453651e-61 | -8.615850e-47 |
| Msa0719180 | Msa1206650 | 0.835416 | 1.699304e-56 | -8.615850e-47 |
| Msa0719180 | Msa1207310 | 0.825754 | 3.945498e-54 | -8.615850e-47 |
| Msa0719180 | Msa1208380 | 0.810975 | 8.823655e-51 | -8.615850e-47 |
| Msa0719180 | Msa1218580 | 0.814110 | 1.819919e-51 | -8.615850e-47 |
| Msa0719180 | Msa1233850 | 0.849411 | 3.290576e-60 | -8.615850e-47 |
| Msa0719180 | Msa1235460 | 0.833335 | 5.657644e-56 | -8.615850e-47 |
| Msa0719180 | Msa1240970 | 0.842094 | 3.189487e-58 | -8.615850e-47 |
| Msa0719180 | Msa1242580 | -0.804313 | 2.293939e-49 | -8.615850e-47 |
| Msa0719180 | Msa1270660 | 0.820488 | 6.680371e-53 | -8.615850e-47 |
| Msa0719180 | Msa1276150 | 0.852547 | 4.298102e-61 | -8.615850e-47 |
| Msa0719180 | Msa1277410 | 0.829489 | 5.001893e-55 | -8.615850e-47 |
| Msa0719180 | Msa1295330 | 0.809357 | 1.969536e-50 | -8.615850e-47 |
| Msa0719180 | Msa1307160 | 0.820535 | 6.515615e-53 | -8.615850e-47 |
| Msa0719180 | Msa1307180 | 0.876032 | 1.927224e-68 | -8.615850e-47 |
| Msa0719180 | Msa1315750 | 0.855497 | 6.063372e-62 | -8.615850e-47 |
| Msa0719180 | Msa1316360 | 0.871725 | 5.489651e-67 | -8.615850e-47 |
| Msa0719180 | Msa1316440 | 0.827427 | 1.574019e-54 | -8.615850e-47 |
| Msa0719180 | Msa1331320 | 0.804471 | 2.126397e-49 | -8.615850e-47 |
| Msa0719180 | Msa1331350 | 0.805237 | 1.471116e-49 | -8.615850e-47 |
| Msa0719180 | Msa1336560 | 0.846107 | 2.673880e-59 | -8.615850e-47 |
| Msa0719180 | Msa1341060 | 0.878735 | 2.208285e-69 | -8.615850e-47 |
| Msa0719180 | Msa1345940 | 0.837669 | 4.534470e-57 | -8.615850e-47 |
| Msa0719180 | Msa1346840 | 0.834451 | 2.974875e-56 | -8.615850e-47 |
| Msa0719180 | Msa1352890 | 0.853655 | 2.069866e-61 | -8.615850e-47 |
| Msa0719180 | Msa1355890 | 0.810813 | 9.563127e-51 | -8.615850e-47 |
| Msa0719180 | Msa1364210 | 0.832450 | 9.390187e-56 | -8.615850e-47 |
| Msa0719180 | Msa1365800 | 0.804017 | 2.643798e-49 | -8.615850e-47 |
| Msa0719180 | Msa1368530 | 0.804114 | 2.523054e-49 | -8.615850e-47 |
| Msa0719180 | Msa1369890 | 0.805157 | 1.528940e-49 | -8.615850e-47 |
| Msa0719180 | Msa1370590 | 0.859537 | 3.861036e-63 | -8.615850e-47 |
| Msa0719180 | Msa1382020 | 0.801203 | 1.006082e-48 | -8.615850e-47 |
| Msa0719180 | Msa1384100 | 0.857036 | 2.145188e-62 | -8.615850e-47 |
| Msa0719180 | Msa1395730 | 0.826372 | 2.813520e-54 | -8.615850e-47 |
| Msa0719180 | Msa1396400 | -0.825960 | 3.524245e-54 | -8.615850e-47 |
| Msa0719180 | Msa1401990 | 0.815314 | 9.850008e-52 | -8.615850e-47 |
| Msa0719180 | Msa1404940 | 0.802585 | 5.230820e-49 | -8.615850e-47 |
| Msa0719180 | Msa1407190 | 0.838382 | 2.972983e-57 | -8.615850e-47 |
| Msa0719180 | Msa1407760 | 0.826017 | 3.415742e-54 | -8.615850e-47 |
| Msa0719180 | Msa1419690 | 0.809098 | 2.237915e-50 | -8.615850e-47 |
| Msa0719180 | Msa1428780 | 0.824359 | 8.423592e-54 | -8.615850e-47 |
| Msa0719180 | Msa1428880 | 0.817876 | 2.626869e-52 | -8.615850e-47 |
| Msa0719180 | Msa1432130 | 0.819963 | 8.810239e-53 | -8.615850e-47 |
| Msa0719180 | Msa1436600 | 0.806767 | 7.010049e-50 | -8.615850e-47 |
| Msa0719180 | Msa1437730 | 0.829793 | 4.219652e-55 | -8.615850e-47 |
| Msa0719180 | Msa1437860 | 0.826509 | 2.608478e-54 | -8.615850e-47 |
| Msa0719180 | Msa1442790 | 0.803251 | 3.811099e-49 | -8.615850e-47 |
| Msa0719180 | Msa1444120 | 0.847515 | 1.101649e-59 | -8.615850e-47 |
| Msa0719180 | Msa1447890 | 0.808974 | 2.379063e-50 | -8.615850e-47 |
| Msa0719180 | Msa1457620 | 0.801859 | 7.379164e-49 | -8.615850e-47 |
| Msa0137480 | Msa0719180 | 0.814048 | 1.878867e-51 | -8.615850e-47 |
| Msa0138020 | Msa0719180 | 0.812939 | 3.294083e-51 | -8.615850e-47 |
| Msa0148080 | Msa0719180 | 0.821041 | 4.985243e-53 | -8.615850e-47 |
| Msa0149440 | Msa0719180 | 0.803284 | 3.752067e-49 | -8.615850e-47 |
| Msa0150230 | Msa0719180 | 0.843714 | 1.182105e-58 | -8.615850e-47 |
| Msa0150260 | Msa0719180 | 0.816877 | 4.408609e-52 | -8.615850e-47 |
| Msa0154920 | Msa0719180 | 0.806087 | 9.754013e-50 | -8.615850e-47 |
| Msa0160960 | Msa0719180 | 0.810451 | 1.145012e-50 | -8.615850e-47 |
| Msa0162630 | Msa0719180 | 0.807953 | 3.928103e-50 | -8.615850e-47 |
| Msa0167980 | Msa0719180 | 0.823165 | 1.604208e-53 | -8.615850e-47 |
| Msa0170430 | Msa0719180 | 0.834969 | 2.203445e-56 | -8.615850e-47 |
| Msa0183870 | Msa0719180 | 0.820594 | 6.316963e-53 | -8.615850e-47 |
| Msa0185080 | Msa0719180 | -0.821412 | 4.092834e-53 | -8.615850e-47 |
| Msa0186950 | Msa0719180 | 0.815658 | 8.258809e-52 | -8.615850e-47 |
| Msa0187490 | Msa0719180 | 0.804657 | 1.944887e-49 | -8.615850e-47 |
| Msa0190590 | Msa0719180 | 0.822525 | 2.261647e-53 | -8.615850e-47 |
| Msa0191070 | Msa0719180 | 0.835833 | 1.333283e-56 | -8.615850e-47 |
| Msa0196670 | Msa0719180 | 0.801608 | 8.309440e-49 | -8.615850e-47 |
| Msa0202490 | Msa0719180 | 0.811352 | 7.308989e-51 | -8.615850e-47 |
| Msa0204960 | Msa0719180 | 0.830560 | 2.741910e-55 | -8.615850e-47 |
| Msa0207040 | Msa0719180 | -0.800812 | 1.209100e-48 | -8.615850e-47 |
| Msa0207670 | Msa0719180 | 0.833945 | 3.984655e-56 | -8.615850e-47 |
| Msa0207700 | Msa0719180 | 0.809649 | 1.704621e-50 | -8.615850e-47 |
| Msa0209080 | Msa0719180 | 0.836630 | 8.359176e-57 | -8.615850e-47 |
| Msa0209350 | Msa0719180 | 0.818006 | 2.455528e-52 | -8.615850e-47 |
| Msa0209500 | Msa0719180 | 0.825693 | 4.077947e-54 | -8.615850e-47 |
| Msa0231790 | Msa0719180 | 0.811598 | 6.461453e-51 | -8.615850e-47 |
| Msa0232790 | Msa0719180 | 0.800160 | 1.642006e-48 | -8.615850e-47 |
| Msa0233370 | Msa0719180 | 0.807694 | 4.460604e-50 | -8.615850e-47 |
| Msa0367760 | Msa0719180 | 0.856983 | 2.224579e-62 | -8.615850e-47 |
| Msa0379690 | Msa0719180 | 0.816258 | 6.067196e-52 | -8.615850e-47 |
| Msa0380100 | Msa0719180 | 0.858116 | 1.027629e-62 | -8.615850e-47 |
| Msa0385500 | Msa0719180 | 0.872502 | 3.026924e-67 | -8.615850e-47 |
| Msa0389210 | Msa0719180 | 0.834531 | 2.840409e-56 | -8.615850e-47 |
| Msa0403770 | Msa0719180 | 0.846117 | 2.656004e-59 | -8.615850e-47 |
| Msa0427580 | Msa0719180 | 0.806255 | 8.987725e-50 | -8.615850e-47 |
| Msa0432500 | Msa0719180 | 0.805251 | 1.460878e-49 | -8.615850e-47 |
| Msa0460100 | Msa0719180 | 0.804928 | 1.706888e-49 | -8.615850e-47 |
| Msa0460740 | Msa0719180 | 0.853375 | 2.491290e-61 | -8.615850e-47 |
| Msa0481030 | Msa0719180 | 0.803060 | 4.173774e-49 | -8.615850e-47 |
| Msa0482040 | Msa0719180 | 0.804748 | 1.861369e-49 | -8.615850e-47 |
| Msa0243090 | Msa0719180 | 0.835986 | 1.219325e-56 | -8.615850e-47 |
| Msa0244980 | Msa0719180 | 0.820647 | 6.142688e-53 | -8.615850e-47 |
| Msa0245580 | Msa0719180 | 0.812454 | 4.205750e-51 | -8.615850e-47 |
| Msa0257490 | Msa0719180 | 0.857840 | 1.240983e-62 | -8.615850e-47 |
| Msa0257520 | Msa0719180 | 0.830359 | 3.069741e-55 | -8.615850e-47 |
| Msa0269470 | Msa0719180 | 0.846563 | 2.008510e-59 | -8.615850e-47 |
| Msa0271770 | Msa0719180 | 0.803825 | 2.898115e-49 | -8.615850e-47 |
| Msa0272300 | Msa0719180 | 0.813136 | 2.982040e-51 | -8.615850e-47 |
| Msa0276100 | Msa0719180 | 0.818904 | 1.536351e-52 | -8.615850e-47 |
| Msa0278570 | Msa0719180 | 0.821164 | 4.669495e-53 | -8.615850e-47 |
| Msa0278580 | Msa0719180 | 0.815412 | 9.367004e-52 | -8.615850e-47 |
| Msa0281530 | Msa0719180 | 0.829000 | 6.574444e-55 | -8.615850e-47 |
| Msa0283420 | Msa0719180 | 0.801001 | 1.106239e-48 | -8.615850e-47 |
| Msa0284180 | Msa0719180 | 0.823139 | 1.626619e-53 | -8.615850e-47 |
| Msa0284450 | Msa0719180 | 0.817177 | 3.775397e-52 | -8.615850e-47 |
| Msa0296790 | Msa0719180 | 0.830400 | 3.000391e-55 | -8.615850e-47 |
| Msa0296920 | Msa0719180 | 0.802352 | 5.842526e-49 | -8.615850e-47 |
| Msa0305410 | Msa0719180 | 0.809800 | 1.582235e-50 | -8.615850e-47 |
| Msa0317940 | Msa0719180 | 0.807214 | 5.638790e-50 | -8.615850e-47 |
| Msa0317960 | Msa0719180 | 0.807870 | 4.092412e-50 | -8.615850e-47 |
| Msa0317970 | Msa0719180 | 0.815717 | 8.014345e-52 | -8.615850e-47 |
| Msa0321690 | Msa0719180 | 0.808543 | 2.940912e-50 | -8.615850e-47 |
| Msa0322240 | Msa0719180 | 0.827273 | 1.713916e-54 | -8.615850e-47 |
| Msa0341480 | Msa0719180 | 0.808205 | 3.472212e-50 | -8.615850e-47 |
| Msa0347750 | Msa0719180 | 0.831811 | 1.350727e-55 | -8.615850e-47 |
| Msa0357900 | Msa0719180 | 0.812495 | 4.120008e-51 | -8.615850e-47 |
| Msa0363640 | Msa0719180 | 0.802215 | 6.237237e-49 | -8.615850e-47 |
| Msa0482940 | Msa0719180 | 0.851843 | 6.812854e-61 | -8.615850e-47 |
| Msa0485710 | Msa0719180 | 0.851344 | 9.434640e-61 | -8.615850e-47 |
| Msa0518170 | Msa0719180 | 0.822511 | 2.277711e-53 | -8.615850e-47 |
| Msa0527540 | Msa0719180 | 0.831465 | 1.644116e-55 | -8.615850e-47 |
| Msa0527740 | Msa0719180 | 0.804415 | 2.184373e-49 | -8.615850e-47 |
| Msa0534870 | Msa0719180 | 0.807709 | 4.427423e-50 | -8.615850e-47 |
| Msa0542290 | Msa0719180 | 0.814828 | 1.262668e-51 | -8.615850e-47 |
| Msa0542560 | Msa0719180 | 0.850474 | 1.658561e-60 | -8.615850e-47 |
| Msa0544840 | Msa0719180 | 0.852961 | 3.274330e-61 | -8.615850e-47 |
| Msa0547160 | Msa0719180 | 0.843390 | 1.443205e-58 | -8.615850e-47 |
| Msa0566350 | Msa0719180 | 0.806908 | 6.545749e-50 | -8.615850e-47 |
| Msa0581110 | Msa0719180 | 0.803940 | 2.742510e-49 | -8.615850e-47 |
| Msa0588260 | Msa0719180 | 0.813004 | 3.186979e-51 | -8.615850e-47 |
| Msa0600080 | Msa0719180 | 0.822391 | 2.428972e-53 | -8.615850e-47 |
| Msa0600450 | Msa0719180 | 0.810138 | 1.338026e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719180 | MtrunA17_Chr5g0409581 | 99.324 | 148 | 1 | 0 | 29 | 176 | 576 | 723 | 1.23e-100 | 305 |
| Msa0719180 | MtrunA17_Chr3g0136741 | 51.408 | 142 | 67 | 2 | 29 | 168 | 121 | 262 | 7.28e-52 | 167 |
| Msa0719180 | MtrunA17_Chr1g0199661 | 56.028 | 141 | 61 | 1 | 29 | 168 | 555 | 695 | 1.52e-49 | 169 |
| Msa0719180 | MtrunA17_Chr2g0304991 | 49.645 | 141 | 70 | 1 | 29 | 168 | 124 | 264 | 2.66e-47 | 155 |
| Msa0719180 | MtrunA17_Chr2g0326781 | 52.482 | 141 | 66 | 1 | 29 | 168 | 583 | 723 | 1.58e-46 | 161 |
| Msa0719180 | MtrunA17_Chr4g0065381 | 51.773 | 141 | 67 | 1 | 29 | 168 | 539 | 679 | 1.35e-45 | 158 |
| Msa0719180 | MtrunA17_Chr4g0033671 | 48.227 | 141 | 71 | 2 | 29 | 167 | 111 | 251 | 2.26e-43 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719180 | AT5G45560.2 | 87.075 | 147 | 19 | 0 | 29 | 175 | 484 | 630 | 5.28e-88 | 270 |
| Msa0719180 | AT5G45560.1 | 87.075 | 147 | 19 | 0 | 29 | 175 | 573 | 719 | 3.13e-87 | 270 |
| Msa0719180 | AT4G19040.1 | 84.354 | 147 | 23 | 0 | 29 | 175 | 572 | 718 | 1.14e-84 | 263 |
| Msa0719180 | AT4G19040.3 | 84.354 | 147 | 23 | 0 | 29 | 175 | 574 | 720 | 1.25e-84 | 263 |
| Msa0719180 | AT4G19040.2 | 84.354 | 147 | 23 | 0 | 29 | 175 | 577 | 723 | 1.53e-84 | 263 |
| Msa0719180 | AT5G10750.1 | 51.773 | 141 | 66 | 2 | 29 | 167 | 131 | 271 | 7.13e-53 | 171 |
| Msa0719180 | AT2G28320.1 | 53.901 | 141 | 64 | 1 | 29 | 168 | 593 | 733 | 6.82e-47 | 163 |
| Msa0719180 | AT1G06050.1 | 49.315 | 146 | 72 | 2 | 29 | 172 | 113 | 258 | 4.78e-46 | 153 |
| Msa0719180 | AT3G54800.2 | 51.389 | 144 | 69 | 1 | 29 | 171 | 590 | 733 | 5.35e-46 | 160 |
| Msa0719180 | AT3G54800.1 | 51.389 | 144 | 69 | 1 | 29 | 171 | 590 | 733 | 5.35e-46 | 160 |
| Msa0719180 | AT5G35180.4 | 49.645 | 141 | 70 | 1 | 29 | 168 | 667 | 807 | 4.07e-43 | 152 |
| Msa0719180 | AT5G35180.1 | 49.645 | 141 | 70 | 1 | 29 | 168 | 634 | 774 | 4.10e-43 | 152 |
| Msa0719180 | AT5G35180.2 | 49.645 | 141 | 70 | 1 | 29 | 168 | 634 | 774 | 4.23e-43 | 152 |
| Msa0719180 | AT5G35180.5 | 49.645 | 141 | 70 | 1 | 29 | 168 | 638 | 778 | 4.54e-43 | 152 |
| Msa0719180 | AT5G24990.1 | 45.070 | 142 | 75 | 3 | 29 | 167 | 125 | 266 | 1.14e-41 | 142 |
| Msa0719180 | AT5G25010.1 | 42.254 | 142 | 79 | 3 | 29 | 167 | 124 | 265 | 1.37e-37 | 131 |
| Msa0719180 | AT5G25020.1 | 40.909 | 132 | 67 | 2 | 37 | 167 | 116 | 237 | 2.96e-28 | 106 |
Find 44 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATATTCATATTCGATTT+TGG | 0.136904 | 5_1:-14179130 | Msa0719180:three_prime_UTR |
| TACTGTTGCTAATGGAGTTT+TGG | 0.160345 | 5_1:-14180228 | Msa0719180:CDS |
| TCTTTCTATGAAATATTAAA+AGG | 0.210439 | 5_1:-14179233 | Msa0719180:three_prime_UTR |
| GATGGATCTGGATCCAGTTT+TGG | 0.264262 | 5_1:+14179376 | None:intergenic |
| CTGTAGGTTGATGTTGATAT+TGG | 0.276327 | 5_1:-14180257 | Msa0719180:intron |
| TGGGAGCACTCCTTGTTTAT+TGG | 0.279732 | 5_1:-14180447 | Msa0719180:CDS |
| CTCCATTATCATCAATGTTC+AGG | 0.291607 | 5_1:-14181874 | Msa0719180:CDS |
| GGTTCTTCTACTGTTGCTAA+TGG | 0.293568 | 5_1:-14180236 | Msa0719180:CDS |
| GGGAGCACTCCTTGTTTATT+GGG | 0.294412 | 5_1:-14180446 | Msa0719180:CDS |
| GTGACCAAGGAGTTAGTTCC+TGG | 0.306389 | 5_1:-14181733 | Msa0719180:CDS |
| CTCTTGCAACGCTTTGTTGA+TGG | 0.315978 | 5_1:-14181706 | Msa0719180:CDS |
| ATGCAGGTTGCGTCTGAAAA+AGG | 0.339972 | 5_1:-14181903 | Msa0719180:intron |
| TACAACACTGGTGGTTGATA+TGG | 0.342426 | 5_1:-14180186 | Msa0719180:CDS |
| GAGTTGCCTGAGAGGCTTAT+TGG | 0.344309 | 5_1:-14179442 | Msa0719180:CDS |
| AAAGAACAATAGAAAAGATT+TGG | 0.365559 | 5_1:+14179341 | None:intergenic |
| GTTCAGGTTCAAGCTGGTAT+AGG | 0.366703 | 5_1:-14179167 | Msa0719180:three_prime_UTR |
| AAGCGTTGCAAGAGTGTTCC+AGG | 0.392075 | 5_1:+14181715 | None:intergenic |
| TGAGCTTTAACCTGCTGTTT+CGG | 0.401153 | 5_1:+14181671 | None:intergenic |
| TGCCTGAACATTGATGATAA+TGG | 0.417550 | 5_1:+14181872 | None:intergenic |
| ATTTGGTCTTGTCATAATGA+TGG | 0.430945 | 5_1:+14179358 | None:intergenic |
| ATGAATACCTTTGGGACTGA+TGG | 0.443802 | 5_1:+14181646 | None:intergenic |
| AGCCTCTCAGGCAACTCATC+AGG | 0.447827 | 5_1:+14179448 | None:intergenic |
| AACTGCGGTAGACCCAAAAC+TGG | 0.450435 | 5_1:-14179389 | Msa0719180:CDS |
| AGCTTCATCACATTACAGTA+TGG | 0.452828 | 5_1:-14181767 | Msa0719180:CDS |
| GGATTGTACGCCAAAGTGTT+GGG | 0.470225 | 5_1:-14180466 | Msa0719180:CDS |
| CACTCCTTGTTTATTGGGAA+AGG | 0.478937 | 5_1:-14180441 | Msa0719180:CDS |
| ACAGCTCCAATAAGCCTCTC+AGG | 0.496663 | 5_1:+14179436 | None:intergenic |
| TCTTGTCATAATGATGGATC+TGG | 0.498898 | 5_1:+14179364 | None:intergenic |
| TGGATTGTACGCCAAAGTGT+TGG | 0.510393 | 5_1:-14180467 | Msa0719180:CDS |
| GTTGATTGCAACTATATTCG+TGG | 0.521889 | 5_1:-14180416 | Msa0719180:CDS |
| TATTTAGTTCAGGTTCAAGC+TGG | 0.536525 | 5_1:-14179173 | Msa0719180:three_prime_UTR |
| AAGGAGTGCTCCCAACACTT+TGG | 0.555865 | 5_1:+14180456 | None:intergenic |
| TGAATACCTTTGGGACTGAT+GGG | 0.570588 | 5_1:+14181647 | None:intergenic |
| TATTGGTGTGATTACAACAC+TGG | 0.572285 | 5_1:-14180198 | Msa0719180:CDS |
| TGTTCCAGGAACTAACTCCT+TGG | 0.578727 | 5_1:+14181729 | None:intergenic |
| ATGACGAATTCCGAAACAGC+AGG | 0.597021 | 5_1:-14181681 | Msa0719180:CDS |
| AAACAATGAACCTACATCCC+AGG | 0.607663 | 5_1:+14179270 | None:intergenic |
| CTCCTGATGAGTTGCCTGAG+AGG | 0.612312 | 5_1:-14179450 | Msa0719180:CDS |
| GAGGTGTTTAAACGACATGC+TGG | 0.643295 | 5_1:+14182197 | None:intergenic |
| GCTCATCCCATCAGTCCCAA+AGG | 0.649317 | 5_1:-14181653 | Msa0719180:intron |
| TGGTGTGATTACAACACTGG+TGG | 0.660451 | 5_1:-14180195 | Msa0719180:CDS |
| TCATTTAGAGCTCAAAACTG+CGG | 0.678495 | 5_1:-14179404 | Msa0719180:CDS |
| ACTGCCTTTCCCAATAAACA+AGG | 0.681486 | 5_1:+14180437 | None:intergenic |
| ATACTGTAATGTGATGAAGC+TGG | 0.702976 | 5_1:+14181769 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAATTTATTCAAGTTAT+TGG | - | chr5_1:14179285-14179304 | Msa0719180:three_prime_UTR | 10.0% |
| !! | ATATATATAAACATATCATA+TGG | - | chr5_1:14180493-14180512 | Msa0719180:intron | 10.0% |
| !!! | TTTATATTTTATTTTCGTTG+AGG | - | chr5_1:14179346-14179365 | Msa0719180:three_prime_UTR | 15.0% |
| !! | AATATTAAATGAATACCTTT+GGG | + | chr5_1:14179674-14179693 | None:intergenic | 15.0% |
| !! | TAGTTATAATTACAAATAGA+GGG | + | chr5_1:14180732-14180751 | None:intergenic | 15.0% |
| !!! | AATTTTACTTCTAAATACTT+AGG | + | chr5_1:14180920-14180939 | None:intergenic | 15.0% |
| !!! | AAATACTTAATTTTAACTTG+TGG | - | chr5_1:14181509-14181528 | Msa0719180:intron | 15.0% |
| !!! | AAAATTTGTAATTTGTTATG+AGG | - | chr5_1:14181715-14181734 | Msa0719180:CDS | 15.0% |
| !! | TCTTTCTATGAAATATTAAA+AGG | - | chr5_1:14182076-14182095 | Msa0719180:intron | 15.0% |
| !!! | ATTTTGTAATTATTTAGTTC+AGG | - | chr5_1:14182126-14182145 | Msa0719180:intron | 15.0% |
| !! | CTCCTATTTAAGAAAAAAAA+CGG | + | chr5_1:14179206-14179225 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTCTTAAATAGGA+GGG | - | chr5_1:14179205-14179224 | Msa0719180:three_prime_UTR | 20.0% |
| !! | AAATTAAATTCACCACATTA+AGG | + | chr5_1:14179253-14179272 | None:intergenic | 20.0% |
| !! | CAATATTAAATGAATACCTT+TGG | + | chr5_1:14179675-14179694 | None:intergenic | 20.0% |
| !! | AAATTATATAATTAACTCGC+TGG | + | chr5_1:14179729-14179748 | None:intergenic | 20.0% |
| !! | CGAGTTAATTATATAATTTG+TGG | - | chr5_1:14179730-14179749 | Msa0719180:intron | 20.0% |
| !! | TAGTTAATGCAAGAAATAAT+TGG | + | chr5_1:14179796-14179815 | None:intergenic | 20.0% |
| !! | AAAATTTATGAATCTTGTTC+TGG | + | chr5_1:14180086-14180105 | None:intergenic | 20.0% |
| !! | AGAAAAGATAGATCAAATAT+AGG | - | chr5_1:14180225-14180244 | Msa0719180:CDS | 20.0% |
| !!! | AAATTTTTATTCTCATGATG+AGG | + | chr5_1:14180416-14180435 | None:intergenic | 20.0% |
| !! | TAACTTTACAACCTTTAAAT+TGG | - | chr5_1:14180538-14180557 | Msa0719180:intron | 20.0% |
| !! | ACTCTATGAAACAAAAAATA+TGG | + | chr5_1:14180658-14180677 | None:intergenic | 20.0% |
| !!! | TATTTTTTGTTTCATAGAGT+AGG | - | chr5_1:14180658-14180677 | Msa0719180:intron | 20.0% |
| !! | GTAGTTATAATTACAAATAG+AGG | + | chr5_1:14180733-14180752 | None:intergenic | 20.0% |
| !!! | GTTTTAAAAGTATAATGACT+TGG | - | chr5_1:14181290-14181309 | Msa0719180:intron | 20.0% |
| !! | AAAACAATTTGGGAAAATTA+GGG | + | chr5_1:14181461-14181480 | None:intergenic | 20.0% |
| !! | AAAGAACAATAGAAAAGATT+TGG | + | chr5_1:14181971-14181990 | None:intergenic | 20.0% |
| !!! | AACATATTCATATTCGATTT+TGG | - | chr5_1:14182179-14182198 | Msa0719180:intron | 20.0% |
| !!! | GACCGTTTTTTTTCTTAAAT+AGG | - | chr5_1:14179201-14179220 | Msa0719180:three_prime_UTR | 25.0% |
| !!! | CGTTTTTTTTCTTAAATAGG+AGG | - | chr5_1:14179204-14179223 | Msa0719180:three_prime_UTR | 25.0% |
| ! | TAATATTGTCATCACTAGAT+TGG | - | chr5_1:14179687-14179706 | Msa0719180:intron | 25.0% |
| ! | AATATTGTCATCACTAGATT+GGG | - | chr5_1:14179688-14179707 | Msa0719180:intron | 25.0% |
| ! | TATTTCTTAGTTTCTCCATA+TGG | - | chr5_1:14179829-14179848 | Msa0719180:intron | 25.0% |
| ! | AAGATAGATCAAATATAGGT+TGG | - | chr5_1:14180229-14180248 | Msa0719180:CDS | 25.0% |
| !!! | TTGTTGGTTATAACAGATTT+TGG | - | chr5_1:14180258-14180277 | Msa0719180:intron | 25.0% |
| !!! | GTTATAACAGATTTTGGAAT+GGG | - | chr5_1:14180264-14180283 | Msa0719180:intron | 25.0% |
| ! | TGATAAATGATTTAGACATG+TGG | + | chr5_1:14180635-14180654 | None:intergenic | 25.0% |
| ! | AAAATTGTGGGAAAAATGAA+GGG | + | chr5_1:14180688-14180707 | None:intergenic | 25.0% |
| ! | AAAAATTGTGGGAAAAATGA+AGG | + | chr5_1:14180689-14180708 | None:intergenic | 25.0% |
| ! | AAAGCATAGCAAAAAATTGT+GGG | + | chr5_1:14180700-14180719 | None:intergenic | 25.0% |
| !! | AAAAGCATAGCAAAAAATTG+TGG | + | chr5_1:14180701-14180720 | None:intergenic | 25.0% |
| !! | ATAACATATACTTGTTTCTC+TGG | + | chr5_1:14180774-14180793 | None:intergenic | 25.0% |
| !! | ATTTTCCAACTAAAAAATGC+AGG | - | chr5_1:14180814-14180833 | Msa0719180:intron | 25.0% |
| !! | TTTTCCAACTAAAAAATGCA+GGG | - | chr5_1:14180815-14180834 | Msa0719180:intron | 25.0% |
| ! | AGATCATAACAAACAAGTTA+GGG | + | chr5_1:14181015-14181034 | None:intergenic | 25.0% |
| ! | TAGATCATAACAAACAAGTT+AGG | + | chr5_1:14181016-14181035 | None:intergenic | 25.0% |
| !! | ATCAAATAACTTTTGTCTGT+AGG | - | chr5_1:14181036-14181055 | Msa0719180:intron | 25.0% |
| !!! | TTGTACAGGTATGTTTTTTA+TGG | - | chr5_1:14181152-14181171 | Msa0719180:intron | 25.0% |
| !! | TTTTATGGTGTAGATATCAT+AGG | - | chr5_1:14181167-14181186 | Msa0719180:intron | 25.0% |
| ! | AAACAATTTGGGAAAATTAG+GGG | + | chr5_1:14181460-14181479 | None:intergenic | 25.0% |
| ! | CAAAACAATTTGGGAAAATT+AGG | + | chr5_1:14181462-14181481 | None:intergenic | 25.0% |
| !!! | TACTTAATTTTAACTTGTGG+AGG | - | chr5_1:14181512-14181531 | Msa0719180:intron | 25.0% |
| !! | AATTTTACATCCCAAACATT+TGG | + | chr5_1:14181701-14181720 | None:intergenic | 25.0% |
| !! | TTGTATAATTTTTCATCTCC+TGG | - | chr5_1:14182021-14182040 | Msa0719180:intron | 25.0% |
| !! | TGTATAATTTTTCATCTCCT+GGG | - | chr5_1:14182022-14182041 | Msa0719180:intron | 25.0% |
| !! | TAGGTTCATTGTTTTCATAT+TGG | - | chr5_1:14182048-14182067 | Msa0719180:intron | 25.0% |
| TGTGATAGAAACACAGATTA+AGG | - | chr5_1:14179176-14179195 | Msa0719180:three_prime_UTR | 30.0% | |
| GTGATAGAAACACAGATTAA+GGG | - | chr5_1:14179177-14179196 | Msa0719180:three_prime_UTR | 30.0% | |
| TGATAGAAACACAGATTAAG+GGG | - | chr5_1:14179178-14179197 | Msa0719180:three_prime_UTR | 30.0% | |
| ! | ACAAATGGACCTTTTCTTTT+TGG | - | chr5_1:14179378-14179397 | Msa0719180:CDS | 30.0% |
| !!! | GGTATTTTATTTTGTGACCA+AGG | - | chr5_1:14179563-14179582 | Msa0719180:intron | 30.0% |
| GTTTCTCCATATGGTTAATT+TGG | - | chr5_1:14179838-14179857 | Msa0719180:intron | 30.0% | |
| CATACTCCAAATTAACCATA+TGG | + | chr5_1:14179847-14179866 | None:intergenic | 30.0% | |
| ! | AGAAGGGTATAACTTAACTT+GGG | - | chr5_1:14179930-14179949 | Msa0719180:intron | 30.0% |
| TATATGCTGCAACAGATAAA+AGG | - | chr5_1:14180035-14180054 | Msa0719180:intron | 30.0% | |
| !! | GGTTATAACAGATTTTGGAA+TGG | - | chr5_1:14180263-14180282 | Msa0719180:intron | 30.0% |
| ! | ATTAAAAGCATAAGCCTGAA+AGG | + | chr5_1:14180294-14180313 | None:intergenic | 30.0% |
| ! | AGAATGTTTTCATAAATGCC+AGG | - | chr5_1:14180314-14180333 | Msa0719180:intron | 30.0% |
| TAAGCTTGAGTGTAAGTTAA+TGG | - | chr5_1:14180361-14180380 | Msa0719180:intron | 30.0% | |
| TTGAGTGTAAGTTAATGGTT+GGG | - | chr5_1:14180366-14180385 | Msa0719180:intron | 30.0% | |
| ! | TTTTTATTCTCATGATGAGG+TGG | + | chr5_1:14180413-14180432 | None:intergenic | 30.0% |
| ! | ACTACATTGCATACATGTTT+TGG | - | chr5_1:14180598-14180617 | Msa0719180:intron | 30.0% |
| AAATTGTGGGAAAAATGAAG+GGG | + | chr5_1:14180687-14180706 | None:intergenic | 30.0% | |
| AAGAATAGGCAAAAATGTGA+AGG | + | chr5_1:14180955-14180974 | None:intergenic | 30.0% | |
| ! | GATTTAAATGGGAGTGTAAT+TGG | - | chr5_1:14181219-14181238 | Msa0719180:intron | 30.0% |
| ACTGAATGCAACAGTTAAAT+AGG | + | chr5_1:14181250-14181269 | None:intergenic | 30.0% | |
| TATTTAACTGTTGCATTCAG+TGG | - | chr5_1:14181249-14181268 | Msa0719180:intron | 30.0% | |
| !! | TAACTTGTGGAGGATTTTAT+TGG | - | chr5_1:14181522-14181541 | Msa0719180:intron | 30.0% |
| GTACAATACACCAAATGTTT+GGG | - | chr5_1:14181688-14181707 | Msa0719180:CDS | 30.0% | |
| ACAAGATTGTTACAATGAAC+AGG | - | chr5_1:14181830-14181849 | Msa0719180:intron | 30.0% | |
| CAAGATTGTTACAATGAACA+GGG | - | chr5_1:14181831-14181850 | Msa0719180:intron | 30.0% | |
| !! | ATTTGGTCTTGTCATAATGA+TGG | + | chr5_1:14181954-14181973 | None:intergenic | 30.0% |
| ! | TCTGTGTTTCTATCACAGAT+GGG | + | chr5_1:14179173-14179192 | None:intergenic | 35.0% |
| ! | ATCTGTGTTTCTATCACAGA+TGG | + | chr5_1:14179174-14179193 | None:intergenic | 35.0% |
| GATAGAAACACAGATTAAGG+GGG | - | chr5_1:14179179-14179198 | Msa0719180:three_prime_UTR | 35.0% | |
| TAATAAGCGTGACCTTAATG+TGG | - | chr5_1:14179238-14179257 | Msa0719180:three_prime_UTR | 35.0% | |
| GCATAGACACCAAAAAGAAA+AGG | + | chr5_1:14179390-14179409 | None:intergenic | 35.0% | |
| !!! | TTTCTTTTTGGTGTCTATGC+AGG | - | chr5_1:14179390-14179409 | Msa0719180:CDS | 35.0% |
| CTCCATTATCATCAATGTTC+AGG | - | chr5_1:14179435-14179454 | Msa0719180:CDS | 35.0% | |
| ! | TGCCTGAACATTGATGATAA+TGG | + | chr5_1:14179440-14179459 | None:intergenic | 35.0% |
| TGAAGTAAATGTGTGTTGTG+TGG | - | chr5_1:14179508-14179527 | Msa0719180:intron | 35.0% | |
| ATACTGTAATGTGATGAAGC+TGG | + | chr5_1:14179543-14179562 | None:intergenic | 35.0% | |
| AGCTTCATCACATTACAGTA+TGG | - | chr5_1:14179542-14179561 | Msa0719180:intron | 35.0% | |
| TGTCAAACACATTCTTGTGA+TGG | - | chr5_1:14179754-14179773 | Msa0719180:intron | 35.0% | |
| TTGGAGTATGTTACAAGCAA+AGG | - | chr5_1:14179857-14179876 | Msa0719180:intron | 35.0% | |
| ! | GTGTTATTGTGTGTTTCCTT+TGG | - | chr5_1:14179896-14179915 | Msa0719180:intron | 35.0% |
| TTATTGTGTGTTTCCTTTGG+AGG | - | chr5_1:14179899-14179918 | Msa0719180:intron | 35.0% | |
| TATTGTGTGTTTCCTTTGGA+GGG | - | chr5_1:14179900-14179919 | Msa0719180:intron | 35.0% | |
| ! | GAGAAGGGTATAACTTAACT+TGG | - | chr5_1:14179929-14179948 | Msa0719180:intron | 35.0% |
| CTCTATAAATGTTCAGTTCG+TGG | - | chr5_1:14180145-14180164 | Msa0719180:intron | 35.0% | |
| TAAATGTTCAGTTCGTGGTT+TGG | - | chr5_1:14180150-14180169 | Msa0719180:intron | 35.0% | |
| ! | TGGTTTGGCAAATGTTTAGA+TGG | - | chr5_1:14180165-14180184 | Msa0719180:intron | 35.0% |
| TACTTTACTAAGCTATGCAC+TGG | + | chr5_1:14180201-14180220 | None:intergenic | 35.0% | |
| TTCTACATGATTCTTTGTCC+TGG | + | chr5_1:14180335-14180354 | None:intergenic | 35.0% | |
| CTTGAGTGTAAGTTAATGGT+TGG | - | chr5_1:14180365-14180384 | Msa0719180:intron | 35.0% | |
| !! | CATTACTGATTTCAAGGGAA+AGG | + | chr5_1:14180457-14180476 | None:intergenic | 35.0% |
| !! | CTGAGCATTACTGATTTCAA+GGG | + | chr5_1:14180462-14180481 | None:intergenic | 35.0% |
| AGGTTGTAAAGTTAAACCCT+GGG | + | chr5_1:14180532-14180551 | None:intergenic | 35.0% | |
| AAGGTTGTAAAGTTAAACCC+TGG | + | chr5_1:14180533-14180552 | None:intergenic | 35.0% | |
| CAACCTTTAAATTGGATGCA+CGG | - | chr5_1:14180546-14180565 | Msa0719180:intron | 35.0% | |
| !! | CTGGCTTTTAGCAAAAAAGA+CGG | + | chr5_1:14180755-14180774 | None:intergenic | 35.0% |
| !!! | TGAACCCTGCATTTTTTAGT+TGG | + | chr5_1:14180822-14180841 | None:intergenic | 35.0% |
| ACTAAAAAATGCAGGGTTCA+TGG | - | chr5_1:14180822-14180841 | Msa0719180:intron | 35.0% | |
| GTTGATTGCAACTATATTCG+TGG | - | chr5_1:14180893-14180912 | Msa0719180:intron | 35.0% | |
| AAGCTTCGTACAACAAGAAT+AGG | + | chr5_1:14180969-14180988 | None:intergenic | 35.0% | |
| AACATACGCCATTCATTAGT+GGG | + | chr5_1:14180992-14181011 | None:intergenic | 35.0% | |
| !! | CTGTAGGTTGATGTTGATAT+TGG | - | chr5_1:14181052-14181071 | Msa0719180:intron | 35.0% |
| ! | TACTGTTGCTAATGGAGTTT+TGG | - | chr5_1:14181081-14181100 | Msa0719180:intron | 35.0% |
| ! | ACTGTTGCTAATGGAGTTTT+GGG | - | chr5_1:14181082-14181101 | Msa0719180:intron | 35.0% |
| TATTGGTGTGATTACAACAC+TGG | - | chr5_1:14181111-14181130 | Msa0719180:intron | 35.0% | |
| ! | TGATATGGCTTTTCTTGTAC+AGG | - | chr5_1:14181138-14181157 | Msa0719180:intron | 35.0% |
| AGCAAGTCGTAGGATTTAAA+TGG | - | chr5_1:14181207-14181226 | Msa0719180:intron | 35.0% | |
| GCAAGTCGTAGGATTTAAAT+GGG | - | chr5_1:14181208-14181227 | Msa0719180:intron | 35.0% | |
| AATTCACTTCTGATGACTGT+GGG | - | chr5_1:14181375-14181394 | Msa0719180:intron | 35.0% | |
| CTACACAATCGGCAATATTA+AGG | + | chr5_1:14181402-14181421 | None:intergenic | 35.0% | |
| GATTTGAAGGTCTACACAAT+CGG | + | chr5_1:14181413-14181432 | None:intergenic | 35.0% | |
| ! | CAGATTTGTTCTCGATTTGA+AGG | + | chr5_1:14181426-14181445 | None:intergenic | 35.0% |
| GAAAATTAGGGGAAATGGTA+AGG | + | chr5_1:14181449-14181468 | None:intergenic | 35.0% | |
| TTTGGGAAAATTAGGGGAAA+TGG | + | chr5_1:14181454-14181473 | None:intergenic | 35.0% | |
| GGTGACAAGCAAAACAATTT+GGG | + | chr5_1:14181471-14181490 | None:intergenic | 35.0% | |
| TTTATAACTCCTAGCACATG+CGG | + | chr5_1:14181492-14181511 | None:intergenic | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr5_1:14181621-14181640 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr5_1:14181620-14181639 | Msa0719180:intron | 35.0% | |
| CGTACAATACACCAAATGTT+TGG | - | chr5_1:14181687-14181706 | Msa0719180:CDS | 35.0% | |
| TGCTTGACAAGTTCAAACAT+GGG | - | chr5_1:14181741-14181760 | Msa0719180:CDS | 35.0% | |
| ! | TCATTTAGAGCTCAAAACTG+CGG | - | chr5_1:14181905-14181924 | Msa0719180:intron | 35.0% |
| !! | TCTTGTCATAATGATGGATC+TGG | + | chr5_1:14181948-14181967 | None:intergenic | 35.0% |
| ! | TATTTAGTTCAGGTTCAAGC+TGG | - | chr5_1:14182136-14182155 | Msa0719180:intron | 35.0% |
| TCGTTTAAACACCTCATTGC+AGG | - | chr5_1:14179120-14179139 | Msa0719180:three_prime_UTR | 40.0% | |
| ! | TTGAGGCTTTTGCTGACAAA+TGG | - | chr5_1:14179363-14179382 | Msa0719180:exon | 40.0% |
| ! | TGAGCTTTAACCTGCTGTTT+CGG | + | chr5_1:14179641-14179660 | None:intergenic | 40.0% |
| !! | TGAATACCTTTGGGACTGAT+GGG | + | chr5_1:14179665-14179684 | None:intergenic | 40.0% |
| !! | ATGAATACCTTTGGGACTGA+TGG | + | chr5_1:14179666-14179685 | None:intergenic | 40.0% |
| ! | ATTGTGTGTTTCCTTTGGAG+GGG | - | chr5_1:14179901-14179920 | Msa0719180:intron | 40.0% |
| ! | TATAGGTTGGCTGAGTTTGT+TGG | - | chr5_1:14180242-14180261 | Msa0719180:CDS | 40.0% |
| GTGTAAGTTAATGGTTGGGT+TGG | - | chr5_1:14180370-14180389 | Msa0719180:intron | 40.0% | |
| !! | CCTGAGCATTACTGATTTCA+AGG | + | chr5_1:14180463-14180482 | None:intergenic | 40.0% |
| CCTTGAAATCAGTAATGCTC+AGG | - | chr5_1:14180460-14180479 | Msa0719180:CDS | 40.0% | |
| ATGCACGGCGAGTTATAATA+TGG | - | chr5_1:14180561-14180580 | Msa0719180:intron | 40.0% | |
| !!! | CATTGCATACATGTTTTGGC+CGG | - | chr5_1:14180602-14180621 | Msa0719180:intron | 40.0% |
| !!! | ATTGCATACATGTTTTGGCC+GGG | - | chr5_1:14180603-14180622 | Msa0719180:intron | 40.0% |
| ! | CACTCCTTGTTTATTGGGAA+AGG | - | chr5_1:14180868-14180887 | Msa0719180:intron | 40.0% |
| ACTGCCTTTCCCAATAAACA+AGG | + | chr5_1:14180875-14180894 | None:intergenic | 40.0% | |
| GAACATACGCCATTCATTAG+TGG | + | chr5_1:14180993-14181012 | None:intergenic | 40.0% | |
| GGTTCTTCTACTGTTGCTAA+TGG | - | chr5_1:14181073-14181092 | Msa0719180:intron | 40.0% | |
| ! | CTGTTGCTAATGGAGTTTTG+GGG | - | chr5_1:14181083-14181102 | Msa0719180:intron | 40.0% |
| ! | TACAACACTGGTGGTTGATA+TGG | - | chr5_1:14181123-14181142 | Msa0719180:intron | 40.0% |
| GAATTCACTTCTGATGACTG+TGG | - | chr5_1:14181374-14181393 | Msa0719180:intron | 40.0% | |
| CGGTGACAAGCAAAACAATT+TGG | + | chr5_1:14181472-14181491 | None:intergenic | 40.0% | |
| ! | CTTGTGGAGGATTTTATTGG+TGG | - | chr5_1:14181525-14181544 | Msa0719180:intron | 40.0% |
| TGTCATGTGACTGTAAGTCA+CGG | - | chr5_1:14181576-14181595 | Msa0719180:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr5_1:14181614-14181633 | Msa0719180:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr5_1:14181615-14181634 | Msa0719180:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr5_1:14181646-14181665 | Msa0719180:intron | 40.0% | |
| !! | CATTTGGTGTATTGTACGCA+GGG | + | chr5_1:14181644-14181663 | None:intergenic | 40.0% |
| !! | ACATTTGGTGTATTGTACGC+AGG | + | chr5_1:14181686-14181705 | None:intergenic | 40.0% |
| GTGCTTGACAAGTTCAAACA+TGG | - | chr5_1:14181740-14181759 | Msa0719180:CDS | 40.0% | |
| ! | ATGGATCTGGATCCAGTTTT+GGG | + | chr5_1:14181935-14181954 | None:intergenic | 40.0% |
| ! | TTTTTCATCTCCTGGGATGT+AGG | - | chr5_1:14182029-14182048 | Msa0719180:intron | 40.0% |
| AAACAATGAACCTACATCCC+AGG | + | chr5_1:14182042-14182061 | None:intergenic | 40.0% | |
| ! | GAGGTGTTTAAACGACATGC+TGG | + | chr5_1:14179115-14179134 | None:intergenic | 45.0% |
| ! | GTGTTTCTATCACAGATGGG+TGG | + | chr5_1:14179170-14179189 | None:intergenic | 45.0% |
| ATGCAGGTTGCGTCTGAAAA+AGG | - | chr5_1:14179406-14179425 | Msa0719180:CDS | 45.0% | |
| TGTTCCAGGAACTAACTCCT+TGG | + | chr5_1:14179583-14179602 | None:intergenic | 45.0% | |
| ! | CTCTTGCAACGCTTTGTTGA+TGG | - | chr5_1:14179603-14179622 | Msa0719180:intron | 45.0% |
| ATGACGAATTCCGAAACAGC+AGG | - | chr5_1:14179628-14179647 | Msa0719180:intron | 45.0% | |
| AAACCCTGGGAAAGTGAACT+CGG | + | chr5_1:14180519-14180538 | None:intergenic | 45.0% | |
| TCGCCGTGCATCCAATTTAA+AGG | + | chr5_1:14180552-14180571 | None:intergenic | 45.0% | |
| ! | TTAGACATGTGGATTGAGCC+CGG | + | chr5_1:14180624-14180643 | None:intergenic | 45.0% |
| TGGATTGTACGCCAAAGTGT+TGG | - | chr5_1:14180842-14180861 | Msa0719180:intron | 45.0% | |
| ! | GGATTGTACGCCAAAGTGTT+GGG | - | chr5_1:14180843-14180862 | Msa0719180:intron | 45.0% |
| !! | TGGGAGCACTCCTTGTTTAT+TGG | - | chr5_1:14180862-14180881 | Msa0719180:intron | 45.0% |
| !! | GGGAGCACTCCTTGTTTATT+GGG | - | chr5_1:14180863-14180882 | Msa0719180:intron | 45.0% |
| CGAAGCTTCCCACTAATGAA+TGG | - | chr5_1:14180981-14181000 | Msa0719180:intron | 45.0% | |
| !!! | GGAGTTTTGGGGCTTGTTAT+TGG | - | chr5_1:14181094-14181113 | Msa0719180:intron | 45.0% |
| TGGTGTGATTACAACACTGG+TGG | - | chr5_1:14181114-14181133 | Msa0719180:intron | 45.0% | |
| TGAACGTCTAAGCAAGTCGT+AGG | - | chr5_1:14181197-14181216 | Msa0719180:intron | 45.0% | |
| GTCATGTGACTGTAAGTCAC+GGG | - | chr5_1:14181577-14181596 | Msa0719180:intron | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr5_1:14181610-14181629 | None:intergenic | 45.0% |
| GCTGCGTACAATACACCAAA+TGG | - | chr5_1:14181642-14181661 | Msa0719180:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr5_1:14181645-14181664 | Msa0719180:intron | 45.0% | |
| ! | GATGGATCTGGATCCAGTTT+TGG | + | chr5_1:14181936-14181955 | None:intergenic | 45.0% |
| ! | GTTCAGGTTCAAGCTGGTAT+AGG | - | chr5_1:14182142-14182161 | Msa0719180:intron | 45.0% |
| !! | ATAAATTATAAATAGTATAA+GGG | + | chr5_1:14179276-14179295 | None:intergenic | 5.0% |
| !! | AATAAATTATAAATAGTATA+AGG | + | chr5_1:14179277-14179296 | None:intergenic | 5.0% |
| CTATGTCTTGGCCTGCAATG+AGG | + | chr5_1:14179134-14179153 | None:intergenic | 50.0% | |
| AATGTGTGTTGTGTGGCTGC+AGG | - | chr5_1:14179515-14179534 | Msa0719180:intron | 50.0% | |
| GTGACCAAGGAGTTAGTTCC+TGG | - | chr5_1:14179576-14179595 | Msa0719180:intron | 50.0% | |
| !! | AAGCGTTGCAAGAGTGTTCC+AGG | + | chr5_1:14179597-14179616 | None:intergenic | 50.0% |
| ! | TGTTTCCTTTGGAGGGGATG+AGG | - | chr5_1:14179907-14179926 | Msa0719180:intron | 50.0% |
| TTTGGAGGGGATGAGGAGAA+GGG | - | chr5_1:14179914-14179933 | Msa0719180:intron | 50.0% | |
| ! | TTGGAATGGGCTCTCCTTTC+AGG | - | chr5_1:14180277-14180296 | Msa0719180:intron | 50.0% |
| !! | AAGGAGTGCTCCCAACACTT+TGG | + | chr5_1:14180856-14180875 | None:intergenic | 50.0% |
| TAAGTCACGGGTTCAAGTCC+TGG | - | chr5_1:14181589-14181608 | Msa0719180:intron | 50.0% | |
| GAGTTGCCTGAGAGGCTTAT+TGG | - | chr5_1:14181867-14181886 | Msa0719180:intron | 50.0% | |
| ACAGCTCCAATAAGCCTCTC+AGG | + | chr5_1:14181876-14181895 | None:intergenic | 50.0% | |
| AACTGCGGTAGACCCAAAAC+TGG | - | chr5_1:14181920-14181939 | Msa0719180:intron | 50.0% | |
| CAGGTGGGTGAGCTATGTCT+TGG | + | chr5_1:14179146-14179165 | None:intergenic | 55.0% | |
| CAAGACATAGCTCACCCACC+TGG | - | chr5_1:14179144-14179163 | Msa0719180:three_prime_UTR | 55.0% | |
| TCTATCACAGATGGGTGGCC+AGG | + | chr5_1:14179165-14179184 | None:intergenic | 55.0% | |
| GCTCATCCCATCAGTCCCAA+AGG | - | chr5_1:14179656-14179675 | Msa0719180:intron | 55.0% | |
| CTTCTCCTCATCCCCTCCAA+AGG | + | chr5_1:14179915-14179934 | None:intergenic | 55.0% | |
| ! | CTTTGGAGGGGATGAGGAGA+AGG | - | chr5_1:14179913-14179932 | Msa0719180:intron | 55.0% |
| ATGGCCGAGTTCACTTTCCC+AGG | - | chr5_1:14180512-14180531 | Msa0719180:intron | 55.0% | |
| TGGCCGAGTTCACTTTCCCA+GGG | - | chr5_1:14180513-14180532 | Msa0719180:intron | 55.0% | |
| TGCTTGTCACCGCATGTGCT+AGG | - | chr5_1:14181480-14181499 | Msa0719180:intron | 55.0% | |
| GTGTATTGTACGCAGGGTCC+GGG | + | chr5_1:14181679-14181698 | None:intergenic | 55.0% | |
| GGTGTATTGTACGCAGGGTC+CGG | + | chr5_1:14181680-14181699 | None:intergenic | 55.0% | |
| CTCCTGATGAGTTGCCTGAG+AGG | - | chr5_1:14181859-14181878 | Msa0719180:intron | 55.0% | |
| AGCCTCTCAGGCAACTCATC+AGG | + | chr5_1:14181864-14181883 | None:intergenic | 55.0% | |
| TCACAGATGGGTGGCCAGGT+GGG | + | chr5_1:14179161-14179180 | None:intergenic | 60.0% | |
| ATCACAGATGGGTGGCCAGG+TGG | + | chr5_1:14179162-14179181 | None:intergenic | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr5_1:14181658-14181677 | Msa0719180:CDS | 60.0% |
| TTGTACGCAGGGTCCGGGAA+GGG | + | chr5_1:14181674-14181693 | None:intergenic | 60.0% | |
| ATTGTACGCAGGGTCCGGGA+AGG | + | chr5_1:14181675-14181694 | None:intergenic | 60.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr5_1:14181660-14181679 | None:intergenic | 65.0% | |
| TGTACGCAGGGTCCGGGAAG+GGG | + | chr5_1:14181673-14181692 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 14179084 | 14182247 | 14179084 | ID=Msa0719180;Name=Msa0719180 |
| chr5_1 | mRNA | 14179084 | 14182247 | 14179084 | ID=Msa0719180-mRNA-1;Parent=Msa0719180;Name=Msa0719180-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0.6|0.66|0.83|0.6|0.66|6|285|178 |
| chr5_1 | exon | 14179084 | 14179479 | 14179084 | ID=Msa0719180-mRNA-1:exon:5603;Parent=Msa0719180-mRNA-1 |
| chr5_1 | exon | 14180172 | 14180273 | 14180172 | ID=Msa0719180-mRNA-1:exon:5602;Parent=Msa0719180-mRNA-1 |
| chr5_1 | exon | 14180400 | 14180495 | 14180400 | ID=Msa0719180-mRNA-1:exon:5601;Parent=Msa0719180-mRNA-1 |
| chr5_1 | exon | 14181654 | 14181794 | 14181654 | ID=Msa0719180-mRNA-1:exon:5600;Parent=Msa0719180-mRNA-1 |
| chr5_1 | exon | 14181871 | 14181919 | 14181871 | ID=Msa0719180-mRNA-1:exon:5599;Parent=Msa0719180-mRNA-1 |
| chr5_1 | exon | 14182210 | 14182247 | 14182210 | ID=Msa0719180-mRNA-1:exon:5598;Parent=Msa0719180-mRNA-1 |
| chr5_1 | CDS | 14182210 | 14182247 | 14182210 | ID=Msa0719180-mRNA-1:cds;Parent=Msa0719180-mRNA-1 |
| chr5_1 | CDS | 14181871 | 14181919 | 14181871 | ID=Msa0719180-mRNA-1:cds;Parent=Msa0719180-mRNA-1 |
| chr5_1 | CDS | 14181654 | 14181794 | 14181654 | ID=Msa0719180-mRNA-1:cds;Parent=Msa0719180-mRNA-1 |
| chr5_1 | CDS | 14180400 | 14180495 | 14180400 | ID=Msa0719180-mRNA-1:cds;Parent=Msa0719180-mRNA-1 |
| chr5_1 | CDS | 14180172 | 14180273 | 14180172 | ID=Msa0719180-mRNA-1:cds;Parent=Msa0719180-mRNA-1 |
| chr5_1 | CDS | 14179369 | 14179479 | 14179369 | ID=Msa0719180-mRNA-1:cds;Parent=Msa0719180-mRNA-1 |
| chr5_1 | three_prime_UTR | 14179084 | 14179368 | 14179084 | ID=Msa0719180-mRNA-1:three_prime_utr;Parent=Msa0719180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
