Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0185170 | XP_003593674.1 | 98.049 | 615 | 11 | 1 | 1 | 615 | 1 | 614 | 0.0 | 1240 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0185170 | G7IFH4 | 98.049 | 615 | 11 | 1 | 1 | 615 | 1 | 614 | 0.0 | 1240 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0034100 | Msa0185170 | 0.849379 | 3.358301e-60 | -8.615850e-47 |
| Msa0081790 | Msa0185170 | 0.819369 | 1.204430e-52 | -8.615850e-47 |
| Msa0128110 | Msa0185170 | 0.844407 | 7.707975e-59 | -8.615850e-47 |
| Msa0131090 | Msa0185170 | 0.807283 | 5.451414e-50 | -8.615850e-47 |
| Msa0163530 | Msa0185170 | 0.803548 | 3.307034e-49 | -8.615850e-47 |
| Msa0185170 | Msa0187980 | 0.806697 | 7.251934e-50 | -8.615850e-47 |
| Msa0185170 | Msa0190840 | 0.811583 | 6.511925e-51 | -8.615850e-47 |
| Msa0185170 | Msa0224400 | 0.802139 | 6.463417e-49 | -8.615850e-47 |
| Msa0185170 | Msa0234670 | 0.940581 | 1.825552e-100 | -8.615850e-47 |
| Msa0185170 | Msa0253160 | 0.812386 | 4.351309e-51 | -8.615850e-47 |
| Msa0185170 | Msa0291940 | 0.801298 | 9.618448e-49 | -8.615850e-47 |
| Msa0185170 | Msa0319340 | 0.805375 | 1.376187e-49 | -8.615850e-47 |
| Msa0185170 | Msa0329910 | 0.814838 | 1.256146e-51 | -8.615850e-47 |
| Msa0185170 | Msa0544600 | 0.823883 | 1.089932e-53 | -8.615850e-47 |
| Msa0185170 | Msa0727300 | 0.809026 | 2.318845e-50 | -8.615850e-47 |
| Msa0185170 | Msa0797980 | 0.820167 | 7.913056e-53 | -8.615850e-47 |
| Msa0185170 | Msa0803530 | 0.830883 | 2.285118e-55 | -8.615850e-47 |
| Msa0185170 | Msa0879650 | 0.807493 | 4.919780e-50 | -8.615850e-47 |
| Msa0185170 | Msa0915550 | 0.835276 | 1.844219e-56 | -8.615850e-47 |
| Msa0185170 | Msa1035640 | 0.804350 | 2.253695e-49 | -8.615850e-47 |
| Msa0185170 | Msa1400290 | 0.809176 | 2.153618e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0185170 | MtrunA17_Chr2g0283031 | 98.214 | 392 | 7 | 0 | 224 | 615 | 1 | 392 | 0.0 | 796 |
| Msa0185170 | MtrunA17_Chr2g0283021 | 97.596 | 208 | 4 | 1 | 1 | 208 | 1 | 207 | 1.20e-143 | 415 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0185170 | AT1G28530.2 | 56.134 | 595 | 244 | 10 | 29 | 613 | 22 | 609 | 0.0 | 623 |
| Msa0185170 | AT1G28530.1 | 56.040 | 596 | 244 | 11 | 29 | 613 | 22 | 610 | 0.0 | 619 |
Find 187 sgRNAs with CRISPR-Local
Find 441 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCTGAAATTGTAGATTTA+AGG | 0.087487 | 1_4:-75272917 | Msa0185170:three_prime_UTR |
| TCTCTACAGTTTAGAATATT+TGG | 0.115970 | 1_4:-75272639 | Msa0185170:three_prime_UTR |
| ATCCTTAAATCTACAATTTC+AGG | 0.117555 | 1_4:+75272915 | None:intergenic |
| AATGGGAGATTCAAAGTTTC+AGG | 0.187379 | 1_4:-75276166 | Msa0185170:CDS |
| GACCTTTAGGCAAGTGGTTT+TGG | 0.229859 | 1_4:-75276831 | Msa0185170:CDS |
| TTTCAGGATTAATTGTTTAA+AGG | 0.234160 | 1_4:+75272931 | None:intergenic |
| GGGTGGTGTTGGGGAGGTGG+AGG | 0.234403 | 1_4:+75278309 | None:intergenic |
| GAAAATCCCTTCCTCCATAT+TGG | 0.244922 | 1_4:-75272773 | Msa0185170:three_prime_UTR |
| AAGGGGTGGTGTTGGGGAGG+TGG | 0.255189 | 1_4:+75278306 | None:intergenic |
| GGTGGAGGGGTGGGGAGAAG+AGG | 0.261614 | 1_4:+75278324 | None:intergenic |
| GTTGGGGAGGTGGAGGGGTG+GGG | 0.275118 | 1_4:+75278316 | None:intergenic |
| GTGTTGGGGAGGTGGAGGGG+TGG | 0.279611 | 1_4:+75278314 | None:intergenic |
| TGTTTAAAGGATCACTGATA+TGG | 0.296506 | 1_4:+75272944 | None:intergenic |
| TGTTGGGGAGGTGGAGGGGT+GGG | 0.297901 | 1_4:+75278315 | None:intergenic |
| CGGTGACTGGAATTGTCTTC+GGG | 0.299528 | 1_4:+75278258 | None:intergenic |
| AAAATCCCTTCCTCCATATT+GGG | 0.304075 | 1_4:-75272772 | Msa0185170:three_prime_UTR |
| AGAATTGATTACCTTTCTAT+TGG | 0.310262 | 1_4:+75275228 | None:intergenic |
| CTTTGAATCTCCCATTATCT+TGG | 0.313417 | 1_4:+75276173 | None:intergenic |
| TGGGGAGAAGAGGGAGGGTT+TGG | 0.319049 | 1_4:+75278334 | None:intergenic |
| CCATAGGATAATTCCTTATC+AGG | 0.319710 | 1_4:+75275277 | None:intergenic |
| TGGCCTAGCCAATGCAAAAT+AGG | 0.319791 | 1_4:+75272964 | None:intergenic |
| TTTATATTGAAAGCCCAATA+TGG | 0.323905 | 1_4:+75272759 | None:intergenic |
| TTACACACGGGAGTTGCTTT+TGG | 0.327725 | 1_4:+75278198 | None:intergenic |
| GTTACGGCTGCTGCGGCTGA+TGG | 0.331848 | 1_4:-75278113 | Msa0185170:CDS |
| AAGATGGAAGGGGTGGTGTT+GGG | 0.331979 | 1_4:+75278299 | None:intergenic |
| GATATCTTGGGACACCTATT+AGG | 0.332888 | 1_4:+75272660 | None:intergenic |
| TCGGTGACTGGAATTGTCTT+CGG | 0.334359 | 1_4:+75278257 | None:intergenic |
| AGAGATTGACCCCAAGATAA+TGG | 0.339096 | 1_4:-75276184 | Msa0185170:CDS |
| TCCTTATCAGGTAGCGAATA+GGG | 0.339841 | 1_4:+75275289 | None:intergenic |
| TTACGGCTGCTGCGGCTGAT+GGG | 0.340335 | 1_4:-75278112 | Msa0185170:CDS |
| CAAAGATCCATCCATTATTC+AGG | 0.344540 | 1_4:+75272687 | None:intergenic |
| AAATAAAATCAGAGCGATTC+TGG | 0.348919 | 1_4:-75276296 | Msa0185170:CDS |
| TCTAAACTGTAGAGATATCT+TGG | 0.351180 | 1_4:+75272647 | None:intergenic |
| GAGGGGTGGGGAGAAGAGGG+AGG | 0.352256 | 1_4:+75278328 | None:intergenic |
| AACAAATGCAATATTATTGT+TGG | 0.358971 | 1_4:-75278507 | Msa0185170:five_prime_UTR |
| GTGGAGGGGTGGGGAGAAGA+GGG | 0.360405 | 1_4:+75278325 | None:intergenic |
| GTGGTGTTGGGGAGGTGGAG+GGG | 0.360541 | 1_4:+75278311 | None:intergenic |
| TGAAAATGCAAGAAGTCTAT+TGG | 0.360923 | 1_4:-75276358 | Msa0185170:CDS |
| TGGATCTTTGACATCCTAAT+AGG | 0.361958 | 1_4:-75272674 | Msa0185170:three_prime_UTR |
| TTTGAATCTCCCATTATCTT+GGG | 0.363447 | 1_4:+75276174 | None:intergenic |
| CCATTGCCGGAGAGTGAGAT+TGG | 0.374225 | 1_4:+75278420 | None:intergenic |
| GGCGGTGAGAGAGGTGGAAT+GGG | 0.379132 | 1_4:+75278363 | None:intergenic |
| AGATGGAAGGGGTGGTGTTG+GGG | 0.388790 | 1_4:+75278300 | None:intergenic |
| ACGTATTGACGATGACCTTT+AGG | 0.390074 | 1_4:-75276844 | Msa0185170:CDS |
| CATTATTCAGGACAGACATT+TGG | 0.392303 | 1_4:+75272699 | None:intergenic |
| TTCTCTGAGTGTCATAGAAA+AGG | 0.392570 | 1_4:-75278457 | Msa0185170:five_prime_UTR |
| GGTGGTGTTGGGGAGGTGGA+GGG | 0.392808 | 1_4:+75278310 | None:intergenic |
| CAAATGTCTGTCCTGAATAA+TGG | 0.395646 | 1_4:-75272698 | Msa0185170:three_prime_UTR |
| ATTGGACACATTAGCATACT+TGG | 0.398166 | 1_4:+75275246 | None:intergenic |
| TTCCTTATCAGGTAGCGAAT+AGG | 0.398500 | 1_4:+75275288 | None:intergenic |
| AGAAGGTACCAAACCTCTCT+TGG | 0.399362 | 1_4:+75276737 | None:intergenic |
| TCTTGTAGCAATCAGTGCCC+TGG | 0.408840 | 1_4:-75274504 | Msa0185170:CDS |
| TCTCTGAGTGTCATAGAAAA+GGG | 0.411731 | 1_4:-75278456 | Msa0185170:five_prime_UTR |
| TGATTTCCGTCAGGCGGTTA+CGG | 0.415343 | 1_4:-75278129 | Msa0185170:CDS |
| AATGAAATTGCAGGTTGGTT+TGG | 0.415481 | 1_4:-75275341 | Msa0185170:intron |
| TGGAAGGGGTGGTGTTGGGG+AGG | 0.417784 | 1_4:+75278303 | None:intergenic |
| TCCCTATTCGCTACCTGATA+AGG | 0.428790 | 1_4:-75275290 | Msa0185170:CDS |
| GAAGATGGAAGGGGTGGTGT+TGG | 0.435493 | 1_4:+75278298 | None:intergenic |
| GAGATTGACCCCAAGATAAT+GGG | 0.437241 | 1_4:-75276183 | Msa0185170:CDS |
| GATGTTACGGAAGCCATTGC+CGG | 0.449776 | 1_4:+75278407 | None:intergenic |
| TGGCGGTGAGAGAGGTGGAA+TGG | 0.450961 | 1_4:+75278362 | None:intergenic |
| GCTAAGCTGAAGAATGCTTA+TGG | 0.451886 | 1_4:-75274025 | Msa0185170:CDS |
| GATGGTATCGGTGCCTGGAT+TGG | 0.455626 | 1_4:-75273977 | Msa0185170:CDS |
| TGCATGATTAATATTTGAAT+CGG | 0.460926 | 1_4:-75272610 | Msa0185170:three_prime_UTR |
| AGTTGCTGATGAACATGTTC+AGG | 0.461769 | 1_4:-75278084 | Msa0185170:CDS |
| AGAGGGAGGGTTTGGTGATG+TGG | 0.462452 | 1_4:+75278342 | None:intergenic |
| GTGGTTCTGATTTCAGTGCT+TGG | 0.463729 | 1_4:-75276236 | Msa0185170:CDS |
| TAGAAGATGGTATCGGTGCC+TGG | 0.463909 | 1_4:-75273982 | Msa0185170:CDS |
| GAAACTCAAGGCATAACTTC+TGG | 0.466848 | 1_4:+75272877 | None:intergenic |
| TGTGGTGGTTGTTGATGTTA+CGG | 0.467786 | 1_4:+75278394 | None:intergenic |
| TCTAGTGAGGGGAAGATAGT+TGG | 0.469621 | 1_4:-75273256 | Msa0185170:CDS |
| TACGGCTGCTGCGGCTGATG+GGG | 0.470656 | 1_4:-75278111 | Msa0185170:CDS |
| GCCAATGCAAAATAGGCATC+TGG | 0.471034 | 1_4:+75272971 | None:intergenic |
| AGAACAGGAGATGATGAAGA+TGG | 0.477972 | 1_4:+75278283 | None:intergenic |
| TGGAACTGTTTCTACTCGAT+TGG | 0.483331 | 1_4:-75278006 | Msa0185170:intron |
| ACAATTTCTTGATAAATCAC+AGG | 0.489817 | 1_4:-75276484 | Msa0185170:CDS |
| GATAAAGTACCATTTGAGAG+TGG | 0.490362 | 1_4:+75276100 | None:intergenic |
| TGGAGCTGTTGATTTCCGTC+AGG | 0.491203 | 1_4:-75278138 | Msa0185170:CDS |
| TCAACCCTTGAGTCGGGTGG+CGG | 0.491477 | 1_4:-75273230 | Msa0185170:CDS |
| AGAAATTGTTGCTCGGTGAC+TGG | 0.492562 | 1_4:+75278245 | None:intergenic |
| GTATCGTTGAGCCAGGTCTC+AGG | 0.493108 | 1_4:-75273045 | Msa0185170:CDS |
| AGCAGGTAATTCTCCAATCC+AGG | 0.494274 | 1_4:+75273964 | None:intergenic |
| GAAGGTACCAAACCTCTCTT+GGG | 0.494677 | 1_4:+75276738 | None:intergenic |
| CTCCAAAACCACTTGCCTAA+AGG | 0.495524 | 1_4:+75276829 | None:intergenic |
| TGGTGATGTGGCGGTGAGAG+AGG | 0.495772 | 1_4:+75278354 | None:intergenic |
| GTAGAAGTGGTTTCTTTCAG+TGG | 0.496006 | 1_4:-75276455 | Msa0185170:CDS |
| GTGAGTATGTACCTGCATAT+CGG | 0.496032 | 1_4:-75276209 | Msa0185170:CDS |
| CCTCTAGCAAAGGAGCTGTA+TGG | 0.498698 | 1_4:-75273187 | Msa0185170:CDS |
| AGCTAGGAAAGTTAAAGAAA+AGG | 0.498775 | 1_4:-75276924 | Msa0185170:CDS |
| AGTGGTTTCAAAAGCATGAA+AGG | 0.499336 | 1_4:-75276437 | Msa0185170:CDS |
| CCTGATAAGGAATTATCCTA+TGG | 0.500484 | 1_4:-75275277 | Msa0185170:CDS |
| CTAAACTGTAGAGATATCTT+GGG | 0.501439 | 1_4:+75272648 | None:intergenic |
| CTTGTAGCAATCAGTGCCCT+GGG | 0.507436 | 1_4:-75274503 | Msa0185170:CDS |
| CCTGCTTCTTCTAGTGACCA+TGG | 0.508790 | 1_4:-75278026 | Msa0185170:CDS |
| GCAAACAACTTCTGCAAGCA+TGG | 0.508825 | 1_4:+75276533 | None:intergenic |
| TGCTAATGTGTCCAATAGAA+AGG | 0.510444 | 1_4:-75275239 | Msa0185170:intron |
| ACGGCTGCTGCGGCTGATGG+GGG | 0.510847 | 1_4:-75278110 | Msa0185170:CDS |
| GGAAGAAGTCTTCAGAGAAT+AGG | 0.516072 | 1_4:-75276140 | Msa0185170:CDS |
| TGAACATGTTCAGGCTGGTA+TGG | 0.516758 | 1_4:-75278075 | Msa0185170:CDS |
| TTTGGCAGTTCTTACCAGCT+AGG | 0.517041 | 1_4:-75276940 | Msa0185170:intron |
| GCAGGCAATTTCCGATTCAT+CGG | 0.517710 | 1_4:-75278222 | Msa0185170:CDS |
| ATTAACCGCCACCCGACTCA+AGG | 0.518153 | 1_4:+75273225 | None:intergenic |
| AGCTGAAGAATGCTTATGGC+TGG | 0.523104 | 1_4:-75274021 | Msa0185170:CDS |
| TTTGGTAAATAGCCTACTAC+TGG | 0.524120 | 1_4:+75272562 | None:intergenic |
| GAGATTCAAAGTTTCAGGGC+TGG | 0.525006 | 1_4:-75276161 | Msa0185170:CDS |
| CATGAAAGGATACAATCAAA+AGG | 0.525188 | 1_4:-75276423 | Msa0185170:CDS |
| CAGGAGATGATGAAGATGGA+AGG | 0.526952 | 1_4:+75278287 | None:intergenic |
| CAAGAAACATGCCACTTGCA+AGG | 0.528805 | 1_4:+75274522 | None:intergenic |
| CACCGAGCAACAATTTCTGC+AGG | 0.530531 | 1_4:-75278240 | Msa0185170:CDS |
| GAGGCAAACAAAACTGTCCC+AGG | 0.530584 | 1_4:+75274486 | None:intergenic |
| TCAATCTCTAACCGATATGC+AGG | 0.531737 | 1_4:+75276198 | None:intergenic |
| CCAATCTCACTCTCCGGCAA+TGG | 0.531971 | 1_4:-75278420 | Msa0185170:exon |
| AAATATCACTTAATGAAGGA+TGG | 0.533017 | 1_4:-75276333 | Msa0185170:CDS |
| GATGAAATCAAGGTAGAAGA+TGG | 0.536107 | 1_4:-75273995 | Msa0185170:CDS |
| AGGAGATGATGAAGATGGAA+GGG | 0.536462 | 1_4:+75278288 | None:intergenic |
| GACCTCACTGTCTTTCAACC+AGG | 0.538015 | 1_4:-75276791 | Msa0185170:CDS |
| GAGCTGAGAGTGAAAGATGC+AGG | 0.538668 | 1_4:+75276576 | None:intergenic |
| CATGGAGATAAGATATTCAT+CGG | 0.540829 | 1_4:+75276551 | None:intergenic |
| TGAAAGCCCAATATGGAGGA+AGG | 0.544322 | 1_4:+75272766 | None:intergenic |
| CAAGCAGGTATCGTTGAGCC+AGG | 0.546931 | 1_4:-75273052 | Msa0185170:intron |
| CATTGCCGGAGAGTGAGATT+GGG | 0.549127 | 1_4:+75278421 | None:intergenic |
| GGATAAATATCACTTAATGA+AGG | 0.551869 | 1_4:-75276337 | Msa0185170:CDS |
| TACACTTTCTACTTCTTCAG+AGG | 0.552604 | 1_4:-75273918 | Msa0185170:CDS |
| CCTGCTTACTTGAGAGGTGA+AGG | 0.553743 | 1_4:-75273947 | Msa0185170:CDS |
| TCAGGCTGGTATGGATGCTA+TGG | 0.554416 | 1_4:-75278066 | Msa0185170:CDS |
| AGAAGTCTTCAGAGAATAGG+TGG | 0.556099 | 1_4:-75276137 | Msa0185170:CDS |
| TTCTCGAATGTTCTTACACA+CGG | 0.556990 | 1_4:+75278185 | None:intergenic |
| GCGGTGAGAGAGGTGGAATG+GGG | 0.558886 | 1_4:+75278364 | None:intergenic |
| GGAGATGATGAAGATGGAAG+GGG | 0.559012 | 1_4:+75278289 | None:intergenic |
| TTGAATCTCCCATTATCTTG+GGG | 0.559278 | 1_4:+75276175 | None:intergenic |
| TGGCTGGTCAGATGAAATCA+AGG | 0.561262 | 1_4:-75274005 | Msa0185170:CDS |
| GTAACTAGCAATATCTTGCA+TGG | 0.561790 | 1_4:+75273871 | None:intergenic |
| TCGGGTGGCGGTTAATCAGT+GGG | 0.563291 | 1_4:-75273218 | Msa0185170:CDS |
| GACGATGACCTTTAGGCAAG+TGG | 0.563970 | 1_4:-75276837 | Msa0185170:CDS |
| ATACTTGGCTGCCACTCCAT+AGG | 0.564764 | 1_4:+75275261 | None:intergenic |
| AAGAACCCAATCTCACTCTC+CGG | 0.565202 | 1_4:-75278426 | Msa0185170:five_prime_UTR |
| GTGGAATGGGGTGAAGAGTG+TGG | 0.566570 | 1_4:+75278376 | None:intergenic |
| ATGGGAGATTCAAAGTTTCA+GGG | 0.566907 | 1_4:-75276165 | Msa0185170:CDS |
| GGAAACACACTGCAGAACAT+AGG | 0.567955 | 1_4:-75274448 | Msa0185170:CDS |
| CCATACAGCTCCTTTGCTAG+AGG | 0.568282 | 1_4:+75273187 | None:intergenic |
| GAATTACCTGCTTACTTGAG+AGG | 0.568426 | 1_4:-75273953 | Msa0185170:CDS |
| GTCGGGTGGCGGTTAATCAG+TGG | 0.568673 | 1_4:-75273219 | Msa0185170:CDS |
| GGAAGGTGAATCCTGAGACC+TGG | 0.569127 | 1_4:+75273034 | None:intergenic |
| AAGAAACATGCCACTTGCAA+GGG | 0.573241 | 1_4:+75274523 | None:intergenic |
| TTGTTTGCCTCGTTTAAGCA+AGG | 0.573634 | 1_4:-75274474 | Msa0185170:CDS |
| CCATGGTCACTAGAAGAAGC+AGG | 0.574009 | 1_4:+75278026 | None:intergenic |
| AACATTAGATATGTACTATG+TGG | 0.574522 | 1_4:-75275314 | Msa0185170:CDS |
| AGGGGTGGGGAGAAGAGGGA+GGG | 0.575733 | 1_4:+75278329 | None:intergenic |
| TTGTCTCAACTCACTCTCGT+TGG | 0.578349 | 1_4:-75278158 | Msa0185170:CDS |
| CTCTGAGTGTCATAGAAAAG+GGG | 0.578789 | 1_4:-75278455 | Msa0185170:five_prime_UTR |
| TCACAGGGTGGTAGTAGAAG+TGG | 0.582213 | 1_4:-75276468 | Msa0185170:CDS |
| CCTTCACCTCTCAAGTAAGC+AGG | 0.583915 | 1_4:+75273947 | None:intergenic |
| GCAAGATATTGCTAGTTACC+AGG | 0.585804 | 1_4:-75273867 | Msa0185170:intron |
| TGCCTCGTTTAAGCAAGGAA+AGG | 0.586120 | 1_4:-75274469 | Msa0185170:CDS |
| GGGAGGGTTTGGTGATGTGG+CGG | 0.586613 | 1_4:+75278345 | None:intergenic |
| CAATTTCTTGATAAATCACA+GGG | 0.587564 | 1_4:-75276483 | Msa0185170:CDS |
| GGCTGATAATCCTCTAGCAA+AGG | 0.591914 | 1_4:-75273197 | Msa0185170:CDS |
| GAAAGCCCAATATGGAGGAA+GGG | 0.600546 | 1_4:+75272767 | None:intergenic |
| CTAGCAAAGGAGCTGTATGG+AGG | 0.605146 | 1_4:-75273184 | Msa0185170:CDS |
| AGCTGTTGATTTCCGTCAGG+CGG | 0.605265 | 1_4:-75278135 | Msa0185170:CDS |
| TTCCTTTCCTTGCTTAAACG+AGG | 0.606243 | 1_4:+75274467 | None:intergenic |
| TTGTCAGTCTCCCTTGCAAG+TGG | 0.607824 | 1_4:-75274533 | Msa0185170:CDS |
| CAGCAGCCGTAACCGCCTGA+CGG | 0.608289 | 1_4:+75278123 | None:intergenic |
| ATAAAGTACCATTTGAGAGT+GGG | 0.613790 | 1_4:+75276101 | None:intergenic |
| TTAACCGCCACCCGACTCAA+GGG | 0.615082 | 1_4:+75273226 | None:intergenic |
| TAGCAAAGGAGCTGTATGGA+GGG | 0.618186 | 1_4:-75273183 | Msa0185170:CDS |
| GAATGGGGTGAAGAGTGTGG+TGG | 0.618536 | 1_4:+75278379 | None:intergenic |
| TGATCTTGAAAACCCAAGAG+AGG | 0.623695 | 1_4:-75276750 | Msa0185170:intron |
| TGCCTGCAGAAATTGTTGCT+CGG | 0.628032 | 1_4:+75278238 | None:intergenic |
| TGATGTGGCGGTGAGAGAGG+TGG | 0.628768 | 1_4:+75278357 | None:intergenic |
| GATGATGAAGATGGAAGGGG+TGG | 0.628970 | 1_4:+75278292 | None:intergenic |
| GTGACTGGAATTGTCTTCGG+GGG | 0.632552 | 1_4:+75278260 | None:intergenic |
| GAAGTCTTCAGAGAATAGGT+GGG | 0.633666 | 1_4:-75276136 | Msa0185170:CDS |
| ATCGAGTAGAAACAGTTCCA+TGG | 0.633831 | 1_4:+75278009 | None:intergenic |
| TAAAATCAGAGCGATTCTGG+TGG | 0.636600 | 1_4:-75276293 | Msa0185170:CDS |
| TGTCTGTCCTGAATAATGGA+TGG | 0.637427 | 1_4:-75272694 | Msa0185170:three_prime_UTR |
| GGTGACTGGAATTGTCTTCG+GGG | 0.638285 | 1_4:+75278259 | None:intergenic |
| ATCAAGGTAGAAGATGGTAT+CGG | 0.640470 | 1_4:-75273989 | Msa0185170:CDS |
| GCTGATGAACATGTTCAGGC+TGG | 0.647254 | 1_4:-75278080 | Msa0185170:CDS |
| TCTCGAATGTTCTTACACAC+GGG | 0.649563 | 1_4:+75278186 | None:intergenic |
| GATACAATCAAAAGGTTCTG+CGG | 0.653952 | 1_4:-75276415 | Msa0185170:CDS |
| ATATTGAAAGCCCAATATGG+AGG | 0.654005 | 1_4:+75272762 | None:intergenic |
| TAAGGAATTATCCTATGGAG+TGG | 0.659350 | 1_4:-75275272 | Msa0185170:CDS |
| TCAGGCGGTTACGGCTGCTG+CGG | 0.661501 | 1_4:-75278120 | Msa0185170:CDS |
| AGGCAAACAAAACTGTCCCA+GGG | 0.673218 | 1_4:+75274487 | None:intergenic |
| CTCCTGGTTGAAAGACAGTG+AGG | 0.688767 | 1_4:+75276789 | None:intergenic |
| TTTCTTGATAAATCACAGGG+TGG | 0.731741 | 1_4:-75276480 | Msa0185170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTATTTTTTAATAAAACTA+TGG | + | chr1_4:75275130-75275149 | None:intergenic | 10.0% |
| !!! | TAGTTTTATTAAAAAATAGA+AGG | - | chr1_4:75275130-75275149 | Msa0185170:intron | 10.0% |
| !!! | AATAAAAAATTATTTAAGAC+AGG | + | chr1_4:75275334-75275353 | None:intergenic | 10.0% |
| !! | ATATTAAATGTAGAATATAT+AGG | - | chr1_4:75275418-75275437 | Msa0185170:intron | 10.0% |
| !! | TTTGAATTAAACAATTTCAT+AGG | + | chr1_4:75273124-75273143 | None:intergenic | 15.0% |
| !! | AAAAACTTATGATAAGTAAT+AGG | + | chr1_4:75273494-75273513 | None:intergenic | 15.0% |
| !!! | TACTTATCATAAGTTTTTTT+TGG | - | chr1_4:75273496-75273515 | Msa0185170:intron | 15.0% |
| !! | TTATATTTACTTAAATAGGT+CGG | - | chr1_4:75273978-75273997 | Msa0185170:CDS | 15.0% |
| !! | TATGAAAAATTAGAGAAAAT+TGG | - | chr1_4:75274833-75274852 | Msa0185170:intron | 15.0% |
| !! | AAACATCACTAAAAATATAA+AGG | + | chr1_4:75275034-75275053 | None:intergenic | 15.0% |
| !! | TTAATTATTATTAGTAGTTG+TGG | - | chr1_4:75275061-75275080 | Msa0185170:intron | 15.0% |
| !! | TTTATTTATTTACTAGTCAA+AGG | - | chr1_4:75275348-75275367 | Msa0185170:intron | 15.0% |
| !! | AAACACTTAAATAAAAACAA+AGG | + | chr1_4:75276028-75276047 | None:intergenic | 15.0% |
| !! | AAAAGGAAAATAATTTAAGT+AGG | + | chr1_4:75276213-75276232 | None:intergenic | 15.0% |
| !! | AACAAACAATAAACATAAAA+AGG | + | chr1_4:75276230-75276249 | None:intergenic | 15.0% |
| !!! | TTTATGTTTATTGTTTGTTT+TGG | - | chr1_4:75276231-75276250 | Msa0185170:CDS | 15.0% |
| !!! | ATTTTAATTTCATTAGCTAT+TGG | - | chr1_4:75277340-75277359 | Msa0185170:intron | 15.0% |
| !!! | GTATTTATTGATTTTCAAAT+AGG | + | chr1_4:75277743-75277762 | None:intergenic | 15.0% |
| !!! | AATTTTTTGTTCTCATAATT+CGG | - | chr1_4:75277764-75277783 | Msa0185170:intron | 15.0% |
| !!! | ATTTAAGGATAAATTTTTTC+AGG | - | chr1_4:75278189-75278208 | Msa0185170:CDS | 15.0% |
| !! | AACAAATGCAATATTATTGT+TGG | - | chr1_4:75272584-75272603 | Msa0185170:three_prime_UTR | 20.0% |
| !!! | AAAATGAATCTCTATGATTT+TGG | - | chr1_4:75273141-75273160 | Msa0185170:intron | 20.0% |
| !!! | AAATGAATCTCTATGATTTT+GGG | - | chr1_4:75273142-75273161 | Msa0185170:intron | 20.0% |
| !! | TAAAATATCTAAATGTGTGA+TGG | + | chr1_4:75273349-75273368 | None:intergenic | 20.0% |
| !! | TATTTATGTAAAGTCTAACA+TGG | + | chr1_4:75273433-75273452 | None:intergenic | 20.0% |
| !! | TAACATGTTAAAAAAGTTGA+AGG | - | chr1_4:75273457-75273476 | Msa0185170:intron | 20.0% |
| !! | TCAATATGAAATACTGAAAT+AGG | + | chr1_4:75273574-75273593 | None:intergenic | 20.0% |
| !! | TCATACAAATAAATCAGAAT+TGG | + | chr1_4:75273750-75273769 | None:intergenic | 20.0% |
| !! | TACTCAAAATGTTTCAAAAA+CGG | + | chr1_4:75274053-75274072 | None:intergenic | 20.0% |
| !!! | AATTTCAAATGTTGTTGTTT+TGG | - | chr1_4:75274133-75274152 | Msa0185170:intron | 20.0% |
| !!! | TCTAATTTTTCATAAGATGA+AGG | + | chr1_4:75274827-75274846 | None:intergenic | 20.0% |
| !!! | AGGATTTAAAGTAGAAAAAA+TGG | - | chr1_4:75275438-75275457 | Msa0185170:intron | 20.0% |
| !! | TACACTGTATTTATATTGTA+TGG | + | chr1_4:75275720-75275739 | None:intergenic | 20.0% |
| !!! | TTCCATGTTTTTTTTTGTTT+TGG | - | chr1_4:75276430-75276449 | Msa0185170:CDS | 20.0% |
| !!! | GTTACAAAATTTTGACAATA+CGG | + | chr1_4:75277254-75277273 | None:intergenic | 20.0% |
| !! | AACTTTGCAATAAAAAAACA+TGG | + | chr1_4:75277299-75277318 | None:intergenic | 20.0% |
| !!! | GATTAATCAATTGACTTTTT+GGG | + | chr1_4:75277469-75277488 | None:intergenic | 20.0% |
| !!! | TGATTAATCAATTGACTTTT+TGG | + | chr1_4:75277470-75277489 | None:intergenic | 20.0% |
| !!! | ATTTTTTGTTCTCATAATTC+GGG | - | chr1_4:75277765-75277784 | Msa0185170:intron | 20.0% |
| !! | TTTCAGGATTAATTGTTTAA+AGG | + | chr1_4:75278163-75278182 | None:intergenic | 20.0% |
| !! | ATTTAAAAAACTGAAACTCA+AGG | + | chr1_4:75278229-75278248 | None:intergenic | 20.0% |
| !!! | TGAGTTTCAGTTTTTTAAAT+AGG | - | chr1_4:75278229-75278248 | Msa0185170:CDS | 20.0% |
| !! | CATCAAAAACTAAAAGATTT+AGG | + | chr1_4:75278258-75278277 | None:intergenic | 20.0% |
| !! | TGCATGATTAATATTTGAAT+CGG | - | chr1_4:75278481-75278500 | Msa0185170:five_prime_UTR | 20.0% |
| !! | TACTGGTAAAAAGAAAATAT+AGG | + | chr1_4:75278515-75278534 | None:intergenic | 20.0% |
| !! | AATGAATCTCTATGATTTTG+GGG | - | chr1_4:75273143-75273162 | Msa0185170:intron | 25.0% |
| !!! | GCATTTTAAAATGTACCTAT+AGG | - | chr1_4:75273201-75273220 | Msa0185170:CDS | 25.0% |
| ! | AAAAATTGAGGATATAGTGA+TGG | - | chr1_4:75273289-75273308 | Msa0185170:intron | 25.0% |
| !! | TAGTGATGGAAATATATTTG+AGG | - | chr1_4:75273303-75273322 | Msa0185170:intron | 25.0% |
| ! | TAAATTACAAGTTAACCTGT+TGG | + | chr1_4:75273634-75273653 | None:intergenic | 25.0% |
| ! | TTCTAAGTAACATGACATAA+GGG | - | chr1_4:75273689-75273708 | Msa0185170:intron | 25.0% |
| !! | TATGATATGAATCTTTTCTG+AGG | - | chr1_4:75273765-75273784 | Msa0185170:intron | 25.0% |
| ! | ATAAGATCAGAATCTCTTAA+AGG | + | chr1_4:75273801-75273820 | None:intergenic | 25.0% |
| ! | TTGAAATTCAATCCTCAAAT+TGG | + | chr1_4:75274121-75274140 | None:intergenic | 25.0% |
| ! | AAGAAAATCAAAGAAACAGA+AGG | + | chr1_4:75274374-75274393 | None:intergenic | 25.0% |
| ! | ACAATTTCTTGATAAATCAC+AGG | - | chr1_4:75274607-75274626 | Msa0185170:intron | 25.0% |
| ! | CAATTTCTTGATAAATCACA+GGG | - | chr1_4:75274608-75274627 | Msa0185170:intron | 25.0% |
| ! | GGATAAATATCACTTAATGA+AGG | - | chr1_4:75274754-75274773 | Msa0185170:intron | 25.0% |
| ! | AAATATCACTTAATGAAGGA+TGG | - | chr1_4:75274758-75274777 | Msa0185170:intron | 25.0% |
| ! | GAAAAATTAGAGAAAATTGG+TGG | - | chr1_4:75274836-75274855 | Msa0185170:intron | 25.0% |
| !! | TATAATTAGACCTTTAGCTT+TGG | - | chr1_4:75275160-75275179 | Msa0185170:intron | 25.0% |
| ! | TATGAGAACAAAACTAATGA+AGG | - | chr1_4:75275284-75275303 | Msa0185170:CDS | 25.0% |
| ! | ATGAGAACAAAACTAATGAA+GGG | - | chr1_4:75275285-75275304 | Msa0185170:CDS | 25.0% |
| !! | GTAGAAAAAATGGTACATTT+TGG | - | chr1_4:75275448-75275467 | Msa0185170:intron | 25.0% |
| ! | TGTTTGGTTAAGTTTGATTA+TGG | - | chr1_4:75275563-75275582 | Msa0185170:intron | 25.0% |
| ! | TTTATATTGTATGGTATGCA+TGG | + | chr1_4:75275711-75275730 | None:intergenic | 25.0% |
| ! | TACAAGTTTAATGAAATTGC+AGG | - | chr1_4:75275741-75275760 | Msa0185170:intron | 25.0% |
| ! | AACATTAGATATGTACTATG+TGG | - | chr1_4:75275777-75275796 | Msa0185170:intron | 25.0% |
| ! | AGAATTGATTACCTTTCTAT+TGG | + | chr1_4:75275866-75275885 | None:intergenic | 25.0% |
| ! | TTCAAAACTCACACTAAATT+TGG | - | chr1_4:75275899-75275918 | Msa0185170:intron | 25.0% |
| !! | TCAAAAGACTTGATTTTACA+TGG | - | chr1_4:75275925-75275944 | Msa0185170:intron | 25.0% |
| !! | TTTTATCAGACTGGAAAATT+TGG | + | chr1_4:75275990-75276009 | None:intergenic | 25.0% |
| ! | TTTGTATGAGAACAAACTTA+CGG | + | chr1_4:75276379-75276398 | None:intergenic | 25.0% |
| !! | TTGGGTTTTTGTAATATGAT+TGG | - | chr1_4:75276459-75276478 | Msa0185170:CDS | 25.0% |
| !! | TATCTTGACATTTAGCTTAT+TGG | - | chr1_4:75276499-75276518 | Msa0185170:CDS | 25.0% |
| ! | TTATTGGCATATTTGTTTGT+AGG | - | chr1_4:75276515-75276534 | Msa0185170:CDS | 25.0% |
| ! | TATTGGCATATTTGTTTGTA+GGG | - | chr1_4:75276516-75276535 | Msa0185170:CDS | 25.0% |
| ! | AAAAGAAAAAACAGCATGTA+AGG | + | chr1_4:75276830-75276849 | None:intergenic | 25.0% |
| !!! | TATGCATTGTTTCTTTCTTT+TGG | - | chr1_4:75276849-75276868 | Msa0185170:CDS | 25.0% |
| !!! | CTTGAATTGAATCTTTTTCA+TGG | - | chr1_4:75277012-75277031 | Msa0185170:intron | 25.0% |
| !!! | ATTGAATCTTTTTCATGGAT+AGG | - | chr1_4:75277017-75277036 | Msa0185170:intron | 25.0% |
| ! | TTAAAGCATGACTAATCATT+AGG | - | chr1_4:75277317-75277336 | Msa0185170:intron | 25.0% |
| ! | AAAAGAGAAATAATATGACG+TGG | - | chr1_4:75277536-75277555 | Msa0185170:intron | 25.0% |
| ! | TGACCAATTTAGTTATAAGA+GGG | - | chr1_4:75277593-75277612 | Msa0185170:intron | 25.0% |
| !!! | TCTACAACAGTAACTTTTTT+TGG | + | chr1_4:75278081-75278100 | None:intergenic | 25.0% |
| ! | ATCCTGAAATTGTAGATTTA+AGG | - | chr1_4:75278174-75278193 | Msa0185170:CDS | 25.0% |
| ! | ATCCTTAAATCTACAATTTC+AGG | + | chr1_4:75278179-75278198 | None:intergenic | 25.0% |
| !!! | ATCTTTTAGTTTTTGATGCA+AGG | - | chr1_4:75278260-75278279 | Msa0185170:CDS | 25.0% |
| ! | TTTATATTGAAAGCCCAATA+TGG | + | chr1_4:75278335-75278354 | None:intergenic | 25.0% |
| !! | TCTCTACAGTTTAGAATATT+TGG | - | chr1_4:75278452-75278471 | Msa0185170:five_prime_UTR | 25.0% |
| !! | ATTTTCTTTTTACCAGTAGT+AGG | - | chr1_4:75278517-75278536 | Msa0185170:five_prime_UTR | 25.0% |
| TACAAAGCAACATAACCTAT+AGG | + | chr1_4:75273219-75273238 | None:intergenic | 30.0% | |
| CATTAGAGCTGAAAAAATTG+AGG | - | chr1_4:75273277-75273296 | Msa0185170:intron | 30.0% | |
| ATAGCTATAAATTGACCAAC+AGG | - | chr1_4:75273616-75273635 | Msa0185170:intron | 30.0% | |
| CTTCTAAGTAACATGACATA+AGG | - | chr1_4:75273688-75273707 | Msa0185170:intron | 30.0% | |
| TCTAAGTAACATGACATAAG+GGG | - | chr1_4:75273690-75273709 | Msa0185170:intron | 30.0% | |
| AATTAGAATAGGTCAATCCA+TGG | + | chr1_4:75274004-75274023 | None:intergenic | 30.0% | |
| CTATTCTAATTCGTAGTTGT+GGG | - | chr1_4:75274013-75274032 | Msa0185170:CDS | 30.0% | |
| GTAAATTAATGTGCTGTCTT+TGG | - | chr1_4:75274070-75274089 | Msa0185170:intron | 30.0% | |
| !! | TTTTCTTTAACTTTCCTAGC+TGG | + | chr1_4:75274168-75274187 | None:intergenic | 30.0% |
| AGCTAGGAAAGTTAAAGAAA+AGG | - | chr1_4:75274167-75274186 | Msa0185170:intron | 30.0% | |
| ! | TATTTTCGAACACTACTTCT+AGG | - | chr1_4:75274223-75274242 | Msa0185170:intron | 30.0% |
| TTTATGCATTTCATATGAGC+AGG | - | chr1_4:75274490-75274509 | Msa0185170:CDS | 30.0% | |
| CATGGAGATAAGATATTCAT+CGG | + | chr1_4:75274543-75274562 | None:intergenic | 30.0% | |
| !!! | GAAATTGTTTTTGAGTGCTT+TGG | + | chr1_4:75274595-75274614 | None:intergenic | 30.0% |
| CATGAAAGGATACAATCAAA+AGG | - | chr1_4:75274668-75274687 | Msa0185170:intron | 30.0% | |
| TGAAAATGCAAGAAGTCTAT+TGG | - | chr1_4:75274733-75274752 | Msa0185170:intron | 30.0% | |
| !!! | CGCTCTGATTTTATTTTTAC+AGG | + | chr1_4:75274791-75274810 | None:intergenic | 30.0% |
| AAATAAAATCAGAGCGATTC+TGG | - | chr1_4:75274795-75274814 | Msa0185170:intron | 30.0% | |
| TTTGAATCTCCCATTATCTT+GGG | + | chr1_4:75274920-75274939 | None:intergenic | 30.0% | |
| ! | ATAAAGTACCATTTGAGAGT+GGG | + | chr1_4:75274993-75275012 | None:intergenic | 30.0% |
| TATTTAAGTAAGCCAAGTAG+TGG | - | chr1_4:75275090-75275109 | Msa0185170:intron | 30.0% | |
| GAATATTTGACCAAAGCTAA+AGG | + | chr1_4:75275173-75275192 | None:intergenic | 30.0% | |
| TCATGTTTATGAGTTGTTAG+TGG | - | chr1_4:75275191-75275210 | Msa0185170:intron | 30.0% | |
| TGAGAACAAAACTAATGAAG+GGG | - | chr1_4:75275286-75275305 | Msa0185170:CDS | 30.0% | |
| AAACATAGAAGTTAGCACTA+AGG | + | chr1_4:75275543-75275562 | None:intergenic | 30.0% | |
| !! | GCTAACTTCTATGTTTTGTT+TGG | - | chr1_4:75275547-75275566 | Msa0185170:intron | 30.0% |
| TTGGTTAAGTTTGATTATGG+TGG | - | chr1_4:75275566-75275585 | Msa0185170:intron | 30.0% | |
| AGTTTAATGAAATTGCAGGT+TGG | - | chr1_4:75275745-75275764 | Msa0185170:intron | 30.0% | |
| ACATGGTATGATATAATCCA+AGG | - | chr1_4:75275942-75275961 | Msa0185170:intron | 30.0% | |
| CATGGTATGATATAATCCAA+GGG | - | chr1_4:75275943-75275962 | Msa0185170:intron | 30.0% | |
| !!! | TGTTGCTTTTTTTATCAGAC+TGG | + | chr1_4:75275999-75276018 | None:intergenic | 30.0% |
| AATTTCAACTCTCTTAAGTG+TGG | - | chr1_4:75276050-75276069 | Msa0185170:intron | 30.0% | |
| ATTTCAACTCTCTTAAGTGT+GGG | - | chr1_4:75276051-75276070 | Msa0185170:intron | 30.0% | |
| CTCTTTATTGTTCAAGATCA+TGG | - | chr1_4:75276139-75276158 | Msa0185170:CDS | 30.0% | |
| ! | AGTTTGTTCTCATACAAACA+AGG | - | chr1_4:75276381-75276400 | Msa0185170:CDS | 30.0% |
| GGCCAAAACAAAAAAAAACA+TGG | + | chr1_4:75276435-75276454 | None:intergenic | 30.0% | |
| ATATTACAAAAACCCAACTC+AGG | + | chr1_4:75276456-75276475 | None:intergenic | 30.0% | |
| ! | TAATATGATTGGTGACTGTT+GGG | - | chr1_4:75276470-75276489 | Msa0185170:CDS | 30.0% |
| ATTGGCATATTTGTTTGTAG+GGG | - | chr1_4:75276517-75276536 | Msa0185170:CDS | 30.0% | |
| ! | TGACTTTTTGGATACAACAA+AGG | - | chr1_4:75276698-75276717 | Msa0185170:intron | 30.0% |
| !!! | TTTCTTTTGGAACTTCCATA+TGG | - | chr1_4:75276862-75276881 | Msa0185170:CDS | 30.0% |
| ! | TTTGCTGTGTTATTCAACTT+AGG | - | chr1_4:75277404-75277423 | Msa0185170:intron | 30.0% |
| CCTATATTAATCCTCATTTG+AGG | + | chr1_4:75277446-75277465 | None:intergenic | 30.0% | |
| CCTCAAATGAGGATTAATAT+AGG | - | chr1_4:75277443-75277462 | Msa0185170:intron | 30.0% | |
| GTGACCAATTTAGTTATAAG+AGG | - | chr1_4:75277592-75277611 | Msa0185170:intron | 30.0% | |
| TCTCCCTCTTATAACTAAAT+TGG | + | chr1_4:75277599-75277618 | None:intergenic | 30.0% | |
| GTATTGAGTATTCTTGTAGT+TGG | - | chr1_4:75277634-75277653 | Msa0185170:intron | 30.0% | |
| !! | CATTTGCTTTTGGATTACTA+GGG | - | chr1_4:75277700-75277719 | Msa0185170:intron | 30.0% |
| CTGAATTTCAAACAATTGCA+AGG | + | chr1_4:75277806-75277825 | None:intergenic | 30.0% | |
| ! | CTTGCAATTGTTTGAAATTC+AGG | - | chr1_4:75277804-75277823 | Msa0185170:intron | 30.0% |
| CTTGGATTTATTTATCAAGC+AGG | - | chr1_4:75278024-75278043 | Msa0185170:CDS | 30.0% | |
| !!! | CAACAGTAACTTTTTTTGGA+AGG | + | chr1_4:75278077-75278096 | None:intergenic | 30.0% |
| TGTTTAAAGGATCACTGATA+TGG | + | chr1_4:75278150-75278169 | None:intergenic | 30.0% | |
| ! | TTGATGCAAGGTAATCTTTT+AGG | - | chr1_4:75278272-75278291 | Msa0185170:CDS | 30.0% |
| CTAAACTGTAGAGATATCTT+GGG | + | chr1_4:75278446-75278465 | None:intergenic | 30.0% | |
| TCTAAACTGTAGAGATATCT+TGG | + | chr1_4:75278447-75278466 | None:intergenic | 30.0% | |
| TTCTCTGAGTGTCATAGAAA+AGG | - | chr1_4:75272634-75272653 | Msa0185170:three_prime_UTR | 35.0% | |
| TCTCTGAGTGTCATAGAAAA+GGG | - | chr1_4:75272635-75272654 | Msa0185170:three_prime_UTR | 35.0% | |
| TTCTCGAATGTTCTTACACA+CGG | + | chr1_4:75272909-75272928 | None:intergenic | 35.0% | |
| ACTAGAAGAAGCAGGAAAAA+CGG | + | chr1_4:75273060-75273079 | None:intergenic | 35.0% | |
| TGAACTATGACGAAATTGAG+TGG | - | chr1_4:75273254-75273273 | Msa0185170:CDS | 35.0% | |
| !! | AGCTTTTTGAAAGCCTGATA+TGG | - | chr1_4:75273527-75273546 | Msa0185170:intron | 35.0% |
| ACATAAGGGGAGAAATAGAT+AGG | - | chr1_4:75273703-75273722 | Msa0185170:intron | 35.0% | |
| CCACAACTACGAATTAGAAT+AGG | + | chr1_4:75274015-75274034 | None:intergenic | 35.0% | |
| CCTATTCTAATTCGTAGTTG+TGG | - | chr1_4:75274012-75274031 | Msa0185170:CDS | 35.0% | |
| TATTATGATTTCTGTCCTGC+AGG | - | chr1_4:75274438-75274457 | Msa0185170:CDS | 35.0% | |
| TTTCTTGATAAATCACAGGG+TGG | - | chr1_4:75274611-75274630 | Msa0185170:intron | 35.0% | |
| ! | AGTGGTTTCAAAAGCATGAA+AGG | - | chr1_4:75274654-75274673 | Msa0185170:intron | 35.0% |
| GATACAATCAAAAGGTTCTG+CGG | - | chr1_4:75274676-75274695 | Msa0185170:intron | 35.0% | |
| TTGAATCTCCCATTATCTTG+GGG | + | chr1_4:75274919-75274938 | None:intergenic | 35.0% | |
| CTTTGAATCTCCCATTATCT+TGG | + | chr1_4:75274921-75274940 | None:intergenic | 35.0% | |
| AATGGGAGATTCAAAGTTTC+AGG | - | chr1_4:75274925-75274944 | Msa0185170:intron | 35.0% | |
| ATGGGAGATTCAAAGTTTCA+GGG | - | chr1_4:75274926-75274945 | Msa0185170:intron | 35.0% | |
| ! | GATAAAGTACCATTTGAGAG+TGG | + | chr1_4:75274994-75275013 | None:intergenic | 35.0% |
| AATATAAAGGTCGACGCAAA+AGG | + | chr1_4:75275021-75275040 | None:intergenic | 35.0% | |
| AAAAGATGAAGTCCACTACT+TGG | + | chr1_4:75275105-75275124 | None:intergenic | 35.0% | |
| !! | CTTACGTTTAGTTCTCTTTG+AGG | + | chr1_4:75275479-75275498 | None:intergenic | 35.0% |
| CAAAGAGAACTAAACGTAAG+AGG | - | chr1_4:75275479-75275498 | Msa0185170:intron | 35.0% | |
| AGAGGTTATTCTGTTCCATT+TGG | - | chr1_4:75275497-75275516 | Msa0185170:intron | 35.0% | |
| CTACACTCTATGGTATAGAA+GGG | - | chr1_4:75275640-75275659 | Msa0185170:intron | 35.0% | |
| ! | GGTATTGCGACATAACTTTT+TGG | + | chr1_4:75275690-75275709 | None:intergenic | 35.0% |
| !! | AATGAAATTGCAGGTTGGTT+TGG | - | chr1_4:75275750-75275769 | Msa0185170:intron | 35.0% |
| CCATAGGATAATTCCTTATC+AGG | + | chr1_4:75275817-75275836 | None:intergenic | 35.0% | |
| CCTGATAAGGAATTATCCTA+TGG | - | chr1_4:75275814-75275833 | Msa0185170:intron | 35.0% | |
| TAAGGAATTATCCTATGGAG+TGG | - | chr1_4:75275819-75275838 | Msa0185170:intron | 35.0% | |
| ATTGGACACATTAGCATACT+TGG | + | chr1_4:75275848-75275867 | None:intergenic | 35.0% | |
| TGCTAATGTGTCCAATAGAA+AGG | - | chr1_4:75275852-75275871 | Msa0185170:intron | 35.0% | |
| AGAGTCTTTCAAATGTCAAC+AGG | - | chr1_4:75276177-75276196 | Msa0185170:CDS | 35.0% | |
| ! | TCTTTTGTGCCTCAAAAAAG+AGG | - | chr1_4:75276273-75276292 | Msa0185170:CDS | 35.0% |
| !! | TAGTTTTCGCCTCTTTTTTG+AGG | + | chr1_4:75276285-75276304 | None:intergenic | 35.0% |
| !!! | TTTTTTGTTTTGGCCTGAGT+TGG | - | chr1_4:75276440-75276459 | Msa0185170:CDS | 35.0% |
| !!! | TTTTTGTTTTGGCCTGAGTT+GGG | - | chr1_4:75276441-75276460 | Msa0185170:CDS | 35.0% |
| ! | GTAATATGATTGGTGACTGT+TGG | - | chr1_4:75276469-75276488 | Msa0185170:CDS | 35.0% |
| ! | CAACGTTATGCATGACTTTT+TGG | - | chr1_4:75276686-75276705 | Msa0185170:intron | 35.0% |
| !! | ATTTGCATGCTGTTTCAGTA+TGG | - | chr1_4:75276774-75276793 | Msa0185170:CDS | 35.0% |
| !! | TTTGCATGCTGTTTCAGTAT+GGG | - | chr1_4:75276775-75276794 | Msa0185170:CDS | 35.0% |
| TAACCTTTGAACAGACCATA+TGG | + | chr1_4:75276880-75276899 | None:intergenic | 35.0% | |
| GTTATACGTCATGATGAGTA+GGG | - | chr1_4:75276896-75276915 | Msa0185170:CDS | 35.0% | |
| ACTTCACAGACAGAAATAGA+AGG | + | chr1_4:75276987-75277006 | None:intergenic | 35.0% | |
| !! | GAATCTTTTTCATGGATAGG+TGG | - | chr1_4:75277020-75277039 | Msa0185170:intron | 35.0% |
| GATGAAATCAAGGTAGAAGA+TGG | - | chr1_4:75277096-75277115 | Msa0185170:intron | 35.0% | |
| ATCAAGGTAGAAGATGGTAT+CGG | - | chr1_4:75277102-75277121 | Msa0185170:intron | 35.0% | |
| TACACTTTCTACTTCTTCAG+AGG | - | chr1_4:75277173-75277192 | Msa0185170:intron | 35.0% | |
| GTAACTAGCAATATCTTGCA+TGG | + | chr1_4:75277223-75277242 | None:intergenic | 35.0% | |
| ! | ACAATTTTTCCTCCATGTAC+GGG | + | chr1_4:75277371-75277390 | None:intergenic | 35.0% |
| ! | GACAATTTTTCCTCCATGTA+CGG | + | chr1_4:75277372-75277391 | None:intergenic | 35.0% |
| AACTTAGGTTATGTTGTGCT+TGG | - | chr1_4:75277419-75277438 | Msa0185170:intron | 35.0% | |
| AGAAATAATATGACGTGGCA+GGG | - | chr1_4:75277541-75277560 | Msa0185170:intron | 35.0% | |
| !! | TTCTTGTAGTTGGTAGTAAC+TGG | - | chr1_4:75277644-75277663 | Msa0185170:intron | 35.0% |
| !! | GCATTTGCTTTTGGATTACT+AGG | - | chr1_4:75277699-75277718 | Msa0185170:intron | 35.0% |
| AAAGCAATTAGAAGCTACCT+GGG | + | chr1_4:75277945-75277964 | None:intergenic | 35.0% | |
| AAAAGCAATTAGAAGCTACC+TGG | + | chr1_4:75277946-75277965 | None:intergenic | 35.0% | |
| AGAAGAGTTAACAGCTTCAA+TGG | + | chr1_4:75278001-75278020 | None:intergenic | 35.0% | |
| ! | CAAGGTAATCTTTTAGGCTT+TGG | - | chr1_4:75278278-75278297 | Msa0185170:CDS | 35.0% |
| AAAATCCCTTCCTCCATATT+GGG | - | chr1_4:75278319-75278338 | Msa0185170:CDS | 35.0% | |
| ATATTGAAAGCCCAATATGG+AGG | + | chr1_4:75278332-75278351 | None:intergenic | 35.0% | |
| CATTATTCAGGACAGACATT+TGG | + | chr1_4:75278395-75278414 | None:intergenic | 35.0% | |
| CAAATGTCTGTCCTGAATAA+TGG | - | chr1_4:75278393-75278412 | Msa0185170:CDS | 35.0% | |
| CAAAGATCCATCCATTATTC+AGG | + | chr1_4:75278407-75278426 | None:intergenic | 35.0% | |
| TGGATCTTTGACATCCTAAT+AGG | - | chr1_4:75278417-75278436 | Msa0185170:exon | 35.0% | |
| CTCTGAGTGTCATAGAAAAG+GGG | - | chr1_4:75272636-75272655 | Msa0185170:three_prime_UTR | 40.0% | |
| TGTGGTGGTTGTTGATGTTA+CGG | + | chr1_4:75272700-75272719 | None:intergenic | 40.0% | |
| AGGAGATGATGAAGATGGAA+GGG | + | chr1_4:75272806-75272825 | None:intergenic | 40.0% | |
| AGAACAGGAGATGATGAAGA+TGG | + | chr1_4:75272811-75272830 | None:intergenic | 40.0% | |
| !! | TTGCTTTTGGTCCGATGAAT+CGG | + | chr1_4:75272883-75272902 | None:intergenic | 40.0% |
| TCTCGAATGTTCTTACACAC+GGG | + | chr1_4:75272908-75272927 | None:intergenic | 40.0% | |
| AGTTGCTGATGAACATGTTC+AGG | - | chr1_4:75273007-75273026 | Msa0185170:CDS | 40.0% | |
| ATCGAGTAGAAACAGTTCCA+TGG | + | chr1_4:75273085-75273104 | None:intergenic | 40.0% | |
| !! | TGGAACTGTTTCTACTCGAT+TGG | - | chr1_4:75273085-75273104 | Msa0185170:intron | 40.0% |
| ATGATCCTAGACTTCAGTTG+TGG | - | chr1_4:75273382-75273401 | Msa0185170:intron | 40.0% | |
| TGATCCTAGACTTCAGTTGT+GGG | - | chr1_4:75273383-75273402 | Msa0185170:intron | 40.0% | |
| GTATGTCAACAGACCATATC+AGG | + | chr1_4:75273543-75273562 | None:intergenic | 40.0% | |
| ! | GTCATGTTACTTAGAAGCAG+TGG | + | chr1_4:75273685-75273704 | None:intergenic | 40.0% |
| AAGGGGAGAAATAGATAGGA+CGG | - | chr1_4:75273707-75273726 | Msa0185170:intron | 40.0% | |
| TTACTTAAATAGGTCGGCCA+TGG | - | chr1_4:75273984-75274003 | Msa0185170:CDS | 40.0% | |
| CTTCTAGCAATGCCAATTTG+AGG | - | chr1_4:75274106-75274125 | Msa0185170:intron | 40.0% | |
| ! | ACGTATTGACGATGACCTTT+AGG | - | chr1_4:75274247-75274266 | Msa0185170:intron | 40.0% |
| !!! | AAGTGGTTTTGGAGCATGTT+TGG | - | chr1_4:75274271-75274290 | Msa0185170:intron | 40.0% |
| ACCAGGAGAAGAACGAAAAA+TGG | - | chr1_4:75274317-75274336 | Msa0185170:intron | 40.0% | |
| !! | TCCATTTTTCGTTCTTCTCC+TGG | + | chr1_4:75274321-75274340 | None:intergenic | 40.0% |
| TGATCTTGAAAACCCAAGAG+AGG | - | chr1_4:75274341-75274360 | Msa0185170:intron | 40.0% | |
| TTGAAAACCCAAGAGAGGTT+TGG | - | chr1_4:75274346-75274365 | Msa0185170:intron | 40.0% | |
| GTAGAAGTGGTTTCTTTCAG+TGG | - | chr1_4:75274636-75274655 | Msa0185170:intron | 40.0% | |
| TAAAATCAGAGCGATTCTGG+TGG | - | chr1_4:75274798-75274817 | Msa0185170:intron | 40.0% | |
| GTGAGTATGTACCTGCATAT+CGG | - | chr1_4:75274882-75274901 | Msa0185170:intron | 40.0% | |
| TCAATCTCTAACCGATATGC+AGG | + | chr1_4:75274896-75274915 | None:intergenic | 40.0% | |
| AGAGATTGACCCCAAGATAA+TGG | - | chr1_4:75274907-75274926 | Msa0185170:intron | 40.0% | |
| GAGATTGACCCCAAGATAAT+GGG | - | chr1_4:75274908-75274927 | Msa0185170:intron | 40.0% | |
| GGAAGAAGTCTTCAGAGAAT+AGG | - | chr1_4:75274951-75274970 | Msa0185170:intron | 40.0% | |
| AGAAGTCTTCAGAGAATAGG+TGG | - | chr1_4:75274954-75274973 | Msa0185170:intron | 40.0% | |
| GAAGTCTTCAGAGAATAGGT+GGG | - | chr1_4:75274955-75274974 | Msa0185170:intron | 40.0% | |
| ! | TCTTTTGACCCACTCTCAAA+TGG | - | chr1_4:75274982-75275001 | Msa0185170:intron | 40.0% |
| AGCAACTTGAAGTGAGAAAG+AGG | + | chr1_4:75275222-75275241 | None:intergenic | 40.0% | |
| ATACCCTTACTTCGAAGGAA+CGG | + | chr1_4:75275259-75275278 | None:intergenic | 40.0% | |
| TGCATATACCCTTACTTCGA+AGG | + | chr1_4:75275264-75275283 | None:intergenic | 40.0% | |
| TAGCACTAAGGTAGTGTGTT+TGG | + | chr1_4:75275531-75275550 | None:intergenic | 40.0% | |
| TGCTTATTGCCTACACTCTA+TGG | - | chr1_4:75275630-75275649 | Msa0185170:intron | 40.0% | |
| CCTTCTATACCATAGAGTGT+AGG | + | chr1_4:75275642-75275661 | None:intergenic | 40.0% | |
| CCTACACTCTATGGTATAGA+AGG | - | chr1_4:75275639-75275658 | Msa0185170:intron | 40.0% | |
| GGTGTACTGCATAGTAATCA+GGG | - | chr1_4:75275661-75275680 | Msa0185170:intron | 40.0% | |
| TCCTTATCAGGTAGCGAATA+GGG | + | chr1_4:75275805-75275824 | None:intergenic | 40.0% | |
| TTCCTTATCAGGTAGCGAAT+AGG | + | chr1_4:75275806-75275825 | None:intergenic | 40.0% | |
| TGGGAGGAAGATCAAACTAT+GGG | - | chr1_4:75276070-75276089 | Msa0185170:intron | 40.0% | |
| TTTGACACACAAAGACAGCT+TGG | + | chr1_4:75276096-75276115 | None:intergenic | 40.0% | |
| ! | AAGAAACATGCCACTTGCAA+GGG | + | chr1_4:75276571-75276590 | None:intergenic | 40.0% |
| TTGTTTGCCTCGTTTAAGCA+AGG | - | chr1_4:75276617-75276636 | Msa0185170:intron | 40.0% | |
| TTCCTTTCCTTGCTTAAACG+AGG | + | chr1_4:75276627-75276646 | None:intergenic | 40.0% | |
| CTTCCATATGGTCTGTTCAA+AGG | - | chr1_4:75276874-75276893 | Msa0185170:CDS | 40.0% | |
| GGTTATACGTCATGATGAGT+AGG | - | chr1_4:75276895-75276914 | Msa0185170:CDS | 40.0% | |
| ACAGACAGAAATAGAAGGCA+CGG | + | chr1_4:75276982-75277001 | None:intergenic | 40.0% | |
| GCTAAGCTGAAGAATGCTTA+TGG | - | chr1_4:75277066-75277085 | Msa0185170:intron | 40.0% | |
| GAATTACCTGCTTACTTGAG+AGG | - | chr1_4:75277138-75277157 | Msa0185170:intron | 40.0% | |
| GCAAGATATTGCTAGTTACC+AGG | - | chr1_4:75277224-75277243 | Msa0185170:intron | 40.0% | |
| !! | TTTTGACAATACGGAGTACC+TGG | + | chr1_4:75277245-75277264 | None:intergenic | 40.0% |
| TAACCAACACACTGCATCTT+TGG | - | chr1_4:75277270-75277289 | Msa0185170:intron | 40.0% | |
| AGTTACGCAAGTCTATCATG+TGG | - | chr1_4:75277489-75277508 | Msa0185170:intron | 40.0% | |
| GAGAAATAATATGACGTGGC+AGG | - | chr1_4:75277540-75277559 | Msa0185170:intron | 40.0% | |
| TATAAGAGGGAGAAAGAGAG+TGG | - | chr1_4:75277606-75277625 | Msa0185170:intron | 40.0% | |
| ATAAGAGGGAGAAAGAGAGT+GGG | - | chr1_4:75277607-75277626 | Msa0185170:intron | 40.0% | |
| !! | TGTAGTTGGTAGTAACTGGT+TGG | - | chr1_4:75277648-75277667 | Msa0185170:intron | 40.0% |
| !! | GTAGTTGGTAGTAACTGGTT+GGG | - | chr1_4:75277649-75277668 | Msa0185170:intron | 40.0% |
| !! | TAGTTGGTAGTAACTGGTTG+GGG | - | chr1_4:75277650-75277669 | Msa0185170:intron | 40.0% |
| AGAGTTTCATGTCTTCTCTG+AGG | - | chr1_4:75277675-75277694 | Msa0185170:intron | 40.0% | |
| ! | AATTCGGGTTCCTAACATGT+TGG | - | chr1_4:75277780-75277799 | Msa0185170:intron | 40.0% |
| AATTGCAAGGCCAACATGTT+AGG | + | chr1_4:75277793-75277812 | None:intergenic | 40.0% | |
| ! | TCAGGTAGTTTTCTCTAGTG+AGG | - | chr1_4:75277822-75277841 | Msa0185170:intron | 40.0% |
| ! | CAGGTAGTTTTCTCTAGTGA+GGG | - | chr1_4:75277823-75277842 | Msa0185170:intron | 40.0% |
| ! | AGGTAGTTTTCTCTAGTGAG+GGG | - | chr1_4:75277824-75277843 | Msa0185170:intron | 40.0% |
| !! | TTGGTTTTCAACCCTTGAGT+CGG | - | chr1_4:75277854-75277873 | Msa0185170:intron | 40.0% |
| AAGCAATTAGAAGCTACCTG+GGG | + | chr1_4:75277944-75277963 | None:intergenic | 40.0% | |
| GCTGTTAACTCTTCTTCTCT+TGG | - | chr1_4:75278006-75278025 | Msa0185170:intron | 40.0% | |
| ! | ACCAGATGCCTATTTTGCAT+TGG | - | chr1_4:75278119-75278138 | Msa0185170:CDS | 40.0% |
| !!! | ATGCCTATTTTGCATTGGCT+AGG | - | chr1_4:75278124-75278143 | Msa0185170:CDS | 40.0% |
| GAAACTCAAGGCATAACTTC+TGG | + | chr1_4:75278217-75278236 | None:intergenic | 40.0% | |
| GAAAATCCCTTCCTCCATAT+TGG | - | chr1_4:75278318-75278337 | Msa0185170:CDS | 40.0% | |
| !!! | AGGACAGACATTTGGCTTTT+CGG | + | chr1_4:75278387-75278406 | None:intergenic | 40.0% |
| ! | TGTCTGTCCTGAATAATGGA+TGG | - | chr1_4:75278397-75278416 | Msa0185170:CDS | 40.0% |
| GATATCTTGGGACACCTATT+AGG | + | chr1_4:75278434-75278453 | None:intergenic | 40.0% | |
| AAGAACCCAATCTCACTCTC+CGG | - | chr1_4:75272665-75272684 | Msa0185170:three_prime_UTR | 45.0% | |
| GGAGATGATGAAGATGGAAG+GGG | + | chr1_4:75272805-75272824 | None:intergenic | 45.0% | |
| CAGGAGATGATGAAGATGGA+AGG | + | chr1_4:75272807-75272826 | None:intergenic | 45.0% | |
| TCGGTGACTGGAATTGTCTT+CGG | + | chr1_4:75272837-75272856 | None:intergenic | 45.0% | |
| ! | AGAAATTGTTGCTCGGTGAC+TGG | + | chr1_4:75272849-75272868 | None:intergenic | 45.0% |
| TGCCTGCAGAAATTGTTGCT+CGG | + | chr1_4:75272856-75272875 | None:intergenic | 45.0% | |
| GCAGGCAATTTCCGATTCAT+CGG | - | chr1_4:75272869-75272888 | Msa0185170:three_prime_UTR | 45.0% | |
| !! | TTACACACGGGAGTTGCTTT+TGG | + | chr1_4:75272896-75272915 | None:intergenic | 45.0% |
| TTGTCTCAACTCACTCTCGT+TGG | - | chr1_4:75272933-75272952 | Msa0185170:three_prime_UTR | 45.0% | |
| TGAACATGTTCAGGCTGGTA+TGG | - | chr1_4:75273016-75273035 | Msa0185170:CDS | 45.0% | |
| CTAGACTTCAGTTGTGGGTA+GGG | - | chr1_4:75273388-75273407 | Msa0185170:intron | 45.0% | |
| TAGACTTCAGTTGTGGGTAG+GGG | - | chr1_4:75273389-75273408 | Msa0185170:intron | 45.0% | |
| GGCTTTCAAAAAGCTCGTGT+AGG | + | chr1_4:75273522-75273541 | None:intergenic | 45.0% | |
| AGGGGAGAAATAGATAGGAC+GGG | - | chr1_4:75273708-75273727 | Msa0185170:intron | 45.0% | |
| TTTGGCAGTTCTTACCAGCT+AGG | - | chr1_4:75274151-75274170 | Msa0185170:intron | 45.0% | |
| ! | GACCTTTAGGCAAGTGGTTT+TGG | - | chr1_4:75274260-75274279 | Msa0185170:intron | 45.0% |
| CTCCAAAACCACTTGCCTAA+AGG | + | chr1_4:75274265-75274284 | None:intergenic | 45.0% | |
| !! | GAAGGTACCAAACCTCTCTT+GGG | + | chr1_4:75274356-75274375 | None:intergenic | 45.0% |
| !! | AGAAGGTACCAAACCTCTCT+TGG | + | chr1_4:75274357-75274376 | None:intergenic | 45.0% |
| AACCGAACGTATCAGTGTCA+GGG | + | chr1_4:75274467-75274486 | None:intergenic | 45.0% | |
| GCAAACAACTTCTGCAAGCA+TGG | + | chr1_4:75274561-75274580 | None:intergenic | 45.0% | |
| !! | GTGGTTCTGATTTCAGTGCT+TGG | - | chr1_4:75274855-75274874 | Msa0185170:intron | 45.0% |
| GAGATTCAAAGTTTCAGGGC+TGG | - | chr1_4:75274930-75274949 | Msa0185170:intron | 45.0% | |
| CTTGAAGTGAGAAAGAGGAG+AGG | + | chr1_4:75275217-75275236 | None:intergenic | 45.0% | |
| ACTTCGAAGGAACGGTCATT+TGG | + | chr1_4:75275251-75275270 | None:intergenic | 45.0% | |
| ATGACCGTTCCTTCGAAGTA+AGG | - | chr1_4:75275252-75275271 | Msa0185170:CDS | 45.0% | |
| TGACCGTTCCTTCGAAGTAA+GGG | - | chr1_4:75275253-75275272 | Msa0185170:CDS | 45.0% | |
| TGTTTGGCAAGCAGACCAAA+TGG | + | chr1_4:75275515-75275534 | None:intergenic | 45.0% | |
| GGGTGTACTGCATAGTAATC+AGG | - | chr1_4:75275660-75275679 | Msa0185170:intron | 45.0% | |
| TCCCTATTCGCTACCTGATA+AGG | - | chr1_4:75275801-75275820 | Msa0185170:intron | 45.0% | |
| AATCCAAGGGAGTTATCGTG+TGG | - | chr1_4:75275956-75275975 | Msa0185170:intron | 45.0% | |
| TCAACTCTCTTAAGTGTGGG+AGG | - | chr1_4:75276054-75276073 | Msa0185170:intron | 45.0% | |
| GTGGGAGGAAGATCAAACTA+TGG | - | chr1_4:75276069-75276088 | Msa0185170:intron | 45.0% | |
| !!! | TCATGTAGCTGCTTTTGCTG+AGG | - | chr1_4:75276339-75276358 | Msa0185170:CDS | 45.0% |
| !!! | CATGTAGCTGCTTTTGCTGA+GGG | - | chr1_4:75276340-75276359 | Msa0185170:CDS | 45.0% |
| ! | CAAGAAACATGCCACTTGCA+AGG | + | chr1_4:75276572-75276591 | None:intergenic | 45.0% |
| AGGCAAACAAAACTGTCCCA+GGG | + | chr1_4:75276607-75276626 | None:intergenic | 45.0% | |
| TGCCTCGTTTAAGCAAGGAA+AGG | - | chr1_4:75276622-75276641 | Msa0185170:intron | 45.0% | |
| GGAAACACACTGCAGAACAT+AGG | - | chr1_4:75276643-75276662 | Msa0185170:intron | 45.0% | |
| CTTTGTTCCCAGATTCCTTG+TGG | - | chr1_4:75276919-75276938 | Msa0185170:CDS | 45.0% | |
| ACGTATGCCACAAGGAATCT+GGG | + | chr1_4:75276929-75276948 | None:intergenic | 45.0% | |
| AACGTATGCCACAAGGAATC+TGG | + | chr1_4:75276930-75276949 | None:intergenic | 45.0% | |
| ACAGTACAACGTATGCCACA+AGG | + | chr1_4:75276937-75276956 | None:intergenic | 45.0% | |
| AGCTGAAGAATGCTTATGGC+TGG | - | chr1_4:75277070-75277089 | Msa0185170:intron | 45.0% | |
| ! | TGGCTGGTCAGATGAAATCA+AGG | - | chr1_4:75277086-75277105 | Msa0185170:intron | 45.0% |
| AGCAGGTAATTCTCCAATCC+AGG | + | chr1_4:75277130-75277149 | None:intergenic | 45.0% | |
| AGACCAAAGATGCAGTGTGT+TGG | + | chr1_4:75277276-75277295 | None:intergenic | 45.0% | |
| TTGTGCTTGGACCTCAAATG+AGG | - | chr1_4:75277432-75277451 | Msa0185170:intron | 45.0% | |
| CAAGTCTATCATGTGGACAG+TGG | - | chr1_4:75277496-75277515 | Msa0185170:intron | 45.0% | |
| !! | AGTTGGTAGTAACTGGTTGG+GGG | - | chr1_4:75277651-75277670 | Msa0185170:intron | 45.0% |
| !!! | CTCTGAGGAGCATTTGCTTT+TGG | - | chr1_4:75277690-75277709 | Msa0185170:intron | 45.0% |
| TCTAGTGAGGGGAAGATAGT+TGG | - | chr1_4:75277835-75277854 | Msa0185170:intron | 45.0% | |
| ! | TGGTTTTCAACCCTTGAGTC+GGG | - | chr1_4:75277855-75277874 | Msa0185170:intron | 45.0% |
| GGCTGATAATCCTCTAGCAA+AGG | - | chr1_4:75277894-75277913 | Msa0185170:intron | 45.0% | |
| TAGCAAAGGAGCTGTATGGA+GGG | - | chr1_4:75277908-75277927 | Msa0185170:intron | 45.0% | |
| GCCAATGCAAAATAGGCATC+TGG | + | chr1_4:75278123-75278142 | None:intergenic | 45.0% | |
| TGGCCTAGCCAATGCAAAAT+AGG | + | chr1_4:75278130-75278149 | None:intergenic | 45.0% | |
| GAAAGCCCAATATGGAGGAA+GGG | + | chr1_4:75278327-75278346 | None:intergenic | 45.0% | |
| TGAAAGCCCAATATGGAGGA+AGG | + | chr1_4:75278328-75278347 | None:intergenic | 45.0% | |
| !! | TTATTTATATTTACTTAAAT+AGG | - | chr1_4:75273974-75273993 | Msa0185170:CDS | 5.0% |
| !! | TATAATTAATAAAATGAAAA+AGG | + | chr1_4:75276736-75276755 | None:intergenic | 5.0% |
| CATTGCCGGAGAGTGAGATT+GGG | + | chr1_4:75272673-75272692 | None:intergenic | 50.0% | |
| GATGTTACGGAAGCCATTGC+CGG | + | chr1_4:75272687-75272706 | None:intergenic | 50.0% | |
| AAGATGGAAGGGGTGGTGTT+GGG | + | chr1_4:75272795-75272814 | None:intergenic | 50.0% | |
| GATGATGAAGATGGAAGGGG+TGG | + | chr1_4:75272802-75272821 | None:intergenic | 50.0% | |
| AATTGTCTTCGGGGGAGAAC+AGG | + | chr1_4:75272826-75272845 | None:intergenic | 50.0% | |
| GTGACTGGAATTGTCTTCGG+GGG | + | chr1_4:75272834-75272853 | None:intergenic | 50.0% | |
| GGTGACTGGAATTGTCTTCG+GGG | + | chr1_4:75272835-75272854 | None:intergenic | 50.0% | |
| CGGTGACTGGAATTGTCTTC+GGG | + | chr1_4:75272836-75272855 | None:intergenic | 50.0% | |
| CACCGAGCAACAATTTCTGC+AGG | - | chr1_4:75272851-75272870 | Msa0185170:three_prime_UTR | 50.0% | |
| !! | TGGAGCTGTTGATTTCCGTC+AGG | - | chr1_4:75272953-75272972 | Msa0185170:exon | 50.0% |
| !! | AGCTGTTGATTTCCGTCAGG+CGG | - | chr1_4:75272956-75272975 | Msa0185170:CDS | 50.0% |
| TGATTTCCGTCAGGCGGTTA+CGG | - | chr1_4:75272962-75272981 | Msa0185170:CDS | 50.0% | |
| GCTGATGAACATGTTCAGGC+TGG | - | chr1_4:75273011-75273030 | Msa0185170:CDS | 50.0% | |
| TCAGGCTGGTATGGATGCTA+TGG | - | chr1_4:75273025-75273044 | Msa0185170:CDS | 50.0% | |
| CCATGGTCACTAGAAGAAGC+AGG | + | chr1_4:75273068-75273087 | None:intergenic | 50.0% | |
| CCTGCTTCTTCTAGTGACCA+TGG | - | chr1_4:75273065-75273084 | Msa0185170:intron | 50.0% | |
| CCTACCCACAACTGAAGTCT+AGG | + | chr1_4:75273390-75273409 | None:intergenic | 50.0% | |
| CCTAGACTTCAGTTGTGGGT+AGG | - | chr1_4:75273387-75273406 | Msa0185170:intron | 50.0% | |
| AGACTTCAGTTGTGGGTAGG+GGG | - | chr1_4:75273390-75273409 | Msa0185170:intron | 50.0% | |
| !! | TAGGACGGGCTGACTTCTAT+AGG | - | chr1_4:75273722-75273741 | Msa0185170:intron | 50.0% |
| !! | AGGACGGGCTGACTTCTATA+GGG | - | chr1_4:75273723-75273742 | Msa0185170:intron | 50.0% |
| GACGATGACCTTTAGGCAAG+TGG | - | chr1_4:75274254-75274273 | Msa0185170:intron | 50.0% | |
| GACCTCACTGTCTTTCAACC+AGG | - | chr1_4:75274300-75274319 | Msa0185170:intron | 50.0% | |
| CTCCTGGTTGAAAGACAGTG+AGG | + | chr1_4:75274305-75274324 | None:intergenic | 50.0% | |
| GTCCCTGACACTGATACGTT+CGG | - | chr1_4:75274462-75274481 | Msa0185170:CDS | 50.0% | |
| GAACCGAACGTATCAGTGTC+AGG | + | chr1_4:75274468-75274487 | None:intergenic | 50.0% | |
| GAGCTGAGAGTGAAAGATGC+AGG | + | chr1_4:75274518-75274537 | None:intergenic | 50.0% | |
| TCACAGGGTGGTAGTAGAAG+TGG | - | chr1_4:75274623-75274642 | Msa0185170:intron | 50.0% | |
| ATACTTGGCTGCCACTCCAT+AGG | + | chr1_4:75275833-75275852 | None:intergenic | 50.0% | |
| ACACCACACGATAACTCCCT+TGG | + | chr1_4:75275962-75275981 | None:intergenic | 50.0% | |
| AAGGGAGTTATCGTGTGGTG+TGG | - | chr1_4:75275961-75275980 | Msa0185170:intron | 50.0% | |
| TTGTCAGTCTCCCTTGCAAG+TGG | - | chr1_4:75276558-75276577 | Msa0185170:CDS | 50.0% | |
| TCTTGTAGCAATCAGTGCCC+TGG | - | chr1_4:75276587-75276606 | Msa0185170:intron | 50.0% | |
| CTTGTAGCAATCAGTGCCCT+GGG | - | chr1_4:75276588-75276607 | Msa0185170:intron | 50.0% | |
| GAGGCAAACAAAACTGTCCC+AGG | + | chr1_4:75276608-75276627 | None:intergenic | 50.0% | |
| !! | TAGAAGATGGTATCGGTGCC+TGG | - | chr1_4:75277109-75277128 | Msa0185170:intron | 50.0% |
| CCTTCACCTCTCAAGTAAGC+AGG | + | chr1_4:75277147-75277166 | None:intergenic | 50.0% | |
| CCTGCTTACTTGAGAGGTGA+AGG | - | chr1_4:75277144-75277163 | Msa0185170:intron | 50.0% | |
| CTATTGGAGTCTCCCGTACA+TGG | - | chr1_4:75277356-75277375 | Msa0185170:intron | 50.0% | |
| AGGGAGAAAGAGAGTGGGAA+GGG | - | chr1_4:75277612-75277631 | Msa0185170:intron | 50.0% | |
| !! | GTTGGTAGTAACTGGTTGGG+GGG | - | chr1_4:75277652-75277671 | Msa0185170:intron | 50.0% |
| ! | TTTTCAACCCTTGAGTCGGG+TGG | - | chr1_4:75277858-75277877 | Msa0185170:intron | 50.0% |
| CCATACAGCTCCTTTGCTAG+AGG | + | chr1_4:75277907-75277926 | None:intergenic | 50.0% | |
| CCTCTAGCAAAGGAGCTGTA+TGG | - | chr1_4:75277904-75277923 | Msa0185170:intron | 50.0% | |
| CTAGCAAAGGAGCTGTATGG+AGG | - | chr1_4:75277907-75277926 | Msa0185170:intron | 50.0% | |
| CCATTGCCGGAGAGTGAGAT+TGG | + | chr1_4:75272674-75272693 | None:intergenic | 55.0% | |
| CCAATCTCACTCTCCGGCAA+TGG | - | chr1_4:75272671-75272690 | Msa0185170:three_prime_UTR | 55.0% | |
| ! | GAATGGGGTGAAGAGTGTGG+TGG | + | chr1_4:75272715-75272734 | None:intergenic | 55.0% |
| GTGGAATGGGGTGAAGAGTG+TGG | + | chr1_4:75272718-75272737 | None:intergenic | 55.0% | |
| !! | AGAGGGAGGGTTTGGTGATG+TGG | + | chr1_4:75272752-75272771 | None:intergenic | 55.0% |
| ! | AGATGGAAGGGGTGGTGTTG+GGG | + | chr1_4:75272794-75272813 | None:intergenic | 55.0% |
| GAAGATGGAAGGGGTGGTGT+TGG | + | chr1_4:75272796-75272815 | None:intergenic | 55.0% | |
| !! | GATGGTATCGGTGCCTGGAT+TGG | - | chr1_4:75277114-75277133 | Msa0185170:intron | 55.0% |
| TTGGAGTCTCCCGTACATGG+AGG | - | chr1_4:75277359-75277378 | Msa0185170:intron | 55.0% | |
| GAGGGAGAAAGAGAGTGGGA+AGG | - | chr1_4:75277611-75277630 | Msa0185170:intron | 55.0% | |
| TTAACCGCCACCCGACTCAA+GGG | + | chr1_4:75277868-75277887 | None:intergenic | 55.0% | |
| ATTAACCGCCACCCGACTCA+AGG | + | chr1_4:75277869-75277888 | None:intergenic | 55.0% | |
| ! | TCGGGTGGCGGTTAATCAGT+GGG | - | chr1_4:75277873-75277892 | Msa0185170:intron | 55.0% |
| GGAGGGAAAAAGCTTTCCCC+AGG | - | chr1_4:75277925-75277944 | Msa0185170:intron | 55.0% | |
| ! | CAAGCAGGTATCGTTGAGCC+AGG | - | chr1_4:75278039-75278058 | Msa0185170:CDS | 55.0% |
| GTATCGTTGAGCCAGGTCTC+AGG | - | chr1_4:75278046-75278065 | Msa0185170:CDS | 55.0% | |
| GGAAGGTGAATCCTGAGACC+TGG | + | chr1_4:75278060-75278079 | None:intergenic | 55.0% | |
| GCGGTGAGAGAGGTGGAATG+GGG | + | chr1_4:75272730-75272749 | None:intergenic | 60.0% | |
| GGCGGTGAGAGAGGTGGAAT+GGG | + | chr1_4:75272731-75272750 | None:intergenic | 60.0% | |
| TGGCGGTGAGAGAGGTGGAA+TGG | + | chr1_4:75272732-75272751 | None:intergenic | 60.0% | |
| TGATGTGGCGGTGAGAGAGG+TGG | + | chr1_4:75272737-75272756 | None:intergenic | 60.0% | |
| ! | TGGTGATGTGGCGGTGAGAG+AGG | + | chr1_4:75272740-75272759 | None:intergenic | 60.0% |
| !! | GGGAGGGTTTGGTGATGTGG+CGG | + | chr1_4:75272749-75272768 | None:intergenic | 60.0% |
| TGGGGAGAAGAGGGAGGGTT+TGG | + | chr1_4:75272760-75272779 | None:intergenic | 60.0% | |
| TTACGGCTGCTGCGGCTGAT+GGG | - | chr1_4:75272979-75272998 | Msa0185170:CDS | 60.0% | |
| CTTCAGTTGTGGGTAGGGGG+TGG | - | chr1_4:75273393-75273412 | Msa0185170:intron | 60.0% | |
| TCAGTGTCAGGGACACCTGC+AGG | + | chr1_4:75274456-75274475 | None:intergenic | 60.0% | |
| TCAACCCTTGAGTCGGGTGG+CGG | - | chr1_4:75277861-75277880 | Msa0185170:intron | 60.0% | |
| ! | GTCGGGTGGCGGTTAATCAG+TGG | - | chr1_4:75277872-75277891 | Msa0185170:intron | 60.0% |
| AGGGGTGGGGAGAAGAGGGA+GGG | + | chr1_4:75272765-75272784 | None:intergenic | 65.0% | |
| GTGGAGGGGTGGGGAGAAGA+GGG | + | chr1_4:75272769-75272788 | None:intergenic | 65.0% | |
| TGTTGGGGAGGTGGAGGGGT+GGG | + | chr1_4:75272779-75272798 | None:intergenic | 65.0% | |
| ! | GTGGTGTTGGGGAGGTGGAG+GGG | + | chr1_4:75272783-75272802 | None:intergenic | 65.0% |
| ! | GGTGGTGTTGGGGAGGTGGA+GGG | + | chr1_4:75272784-75272803 | None:intergenic | 65.0% |
| ! | AAGGGGTGGTGTTGGGGAGG+TGG | + | chr1_4:75272788-75272807 | None:intergenic | 65.0% |
| ! | TGGAAGGGGTGGTGTTGGGG+AGG | + | chr1_4:75272791-75272810 | None:intergenic | 65.0% |
| CAGCAGCCGTAACCGCCTGA+CGG | + | chr1_4:75272971-75272990 | None:intergenic | 65.0% | |
| TCAGGCGGTTACGGCTGCTG+CGG | - | chr1_4:75272971-75272990 | Msa0185170:CDS | 65.0% | |
| GTTACGGCTGCTGCGGCTGA+TGG | - | chr1_4:75272978-75272997 | Msa0185170:CDS | 65.0% | |
| TACGGCTGCTGCGGCTGATG+GGG | - | chr1_4:75272980-75272999 | Msa0185170:CDS | 65.0% | |
| GAGGGGTGGGGAGAAGAGGG+AGG | + | chr1_4:75272766-75272785 | None:intergenic | 70.0% | |
| GGTGGAGGGGTGGGGAGAAG+AGG | + | chr1_4:75272770-75272789 | None:intergenic | 70.0% | |
| GTTGGGGAGGTGGAGGGGTG+GGG | + | chr1_4:75272778-75272797 | None:intergenic | 70.0% | |
| GTGTTGGGGAGGTGGAGGGG+TGG | + | chr1_4:75272780-75272799 | None:intergenic | 70.0% | |
| ! | GGGTGGTGTTGGGGAGGTGG+AGG | + | chr1_4:75272785-75272804 | None:intergenic | 70.0% |
| ACGGCTGCTGCGGCTGATGG+GGG | - | chr1_4:75272981-75273000 | Msa0185170:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 75272573 | 75278540 | 75272573 | ID=Msa0185170;Name=Msa0185170 |
| chr1_4 | mRNA | 75272573 | 75278540 | 75272573 | ID=Msa0185170-mRNA-1;Parent=Msa0185170;Name=Msa0185170-mRNA-1;_AED=0.05;_eAED=0.05;_QI=117|1|1|1|1|1|8|382|615 |
| chr1_4 | exon | 75272573 | 75273067 | 75272573 | ID=Msa0185170-mRNA-1:exon:25576;Parent=Msa0185170-mRNA-1 |
| chr1_4 | exon | 75273167 | 75273287 | 75273167 | ID=Msa0185170-mRNA-1:exon:25575;Parent=Msa0185170-mRNA-1 |
| chr1_4 | exon | 75273868 | 75274074 | 75273868 | ID=Msa0185170-mRNA-1:exon:25574;Parent=Msa0185170-mRNA-1 |
| chr1_4 | exon | 75274394 | 75274576 | 75274394 | ID=Msa0185170-mRNA-1:exon:25573;Parent=Msa0185170-mRNA-1 |
| chr1_4 | exon | 75275240 | 75275350 | 75275240 | ID=Msa0185170-mRNA-1:exon:25572;Parent=Msa0185170-mRNA-1 |
| chr1_4 | exon | 75276110 | 75276601 | 75276110 | ID=Msa0185170-mRNA-1:exon:25571;Parent=Msa0185170-mRNA-1 |
| chr1_4 | exon | 75276751 | 75276954 | 75276751 | ID=Msa0185170-mRNA-1:exon:25570;Parent=Msa0185170-mRNA-1 |
| chr1_4 | exon | 75278007 | 75278540 | 75278007 | ID=Msa0185170-mRNA-1:exon:25569;Parent=Msa0185170-mRNA-1 |
| chr1_4 | five_prime_UTR | 75278424 | 75278540 | 75278424 | ID=Msa0185170-mRNA-1:five_prime_utr;Parent=Msa0185170-mRNA-1 |
| chr1_4 | CDS | 75278007 | 75278423 | 75278007 | ID=Msa0185170-mRNA-1:cds;Parent=Msa0185170-mRNA-1 |
| chr1_4 | CDS | 75276751 | 75276954 | 75276751 | ID=Msa0185170-mRNA-1:cds;Parent=Msa0185170-mRNA-1 |
| chr1_4 | CDS | 75276110 | 75276601 | 75276110 | ID=Msa0185170-mRNA-1:cds;Parent=Msa0185170-mRNA-1 |
| chr1_4 | CDS | 75275240 | 75275350 | 75275240 | ID=Msa0185170-mRNA-1:cds;Parent=Msa0185170-mRNA-1 |
| chr1_4 | CDS | 75274394 | 75274576 | 75274394 | ID=Msa0185170-mRNA-1:cds;Parent=Msa0185170-mRNA-1 |
| chr1_4 | CDS | 75273868 | 75274074 | 75273868 | ID=Msa0185170-mRNA-1:cds;Parent=Msa0185170-mRNA-1 |
| chr1_4 | CDS | 75273167 | 75273287 | 75273167 | ID=Msa0185170-mRNA-1:cds;Parent=Msa0185170-mRNA-1 |
| chr1_4 | CDS | 75272955 | 75273067 | 75272955 | ID=Msa0185170-mRNA-1:cds;Parent=Msa0185170-mRNA-1 |
| chr1_4 | three_prime_UTR | 75272573 | 75272954 | 75272573 | ID=Msa0185170-mRNA-1:three_prime_utr;Parent=Msa0185170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
