AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0803530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0803530 MtrunA17_Chr5g0411441 63.426 216 11 3 2 149 460 675 5.19e-81 251
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 108 sgRNAs with CRISPR-Local

Find 574 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACTCAACTATGCCTATTT+TGG 0.073009 5_3:-18736392 Msa0803530:five_prime_UTR
TTCCTGCTCTTTCTTGTTTC+AGG 0.095079 5_3:-18736333 Msa0803530:intron
CATCAGCCACACTCACTTTA+TGG 0.179907 5_3:+18734088 None:intergenic
TATTATCATGTTTCACATTC+TGG 0.203642 5_3:+18734856 None:intergenic
TTTCTTCACCTTATCAAGTA+TGG 0.230437 5_3:+18734640 None:intergenic
GTGTGTGACAGTGTTGTTTA+TGG 0.257012 5_3:-18733302 Msa0803530:intron
ATATCTGTATCTTAGGTTAA+AGG 0.261539 5_3:-18735667 Msa0803530:intron
CCACATAAGGCCAATTTATC+TGG 0.266132 5_3:+18732269 None:intergenic
ATGTGAAACATGATAATATT+TGG 0.276154 5_3:-18734851 Msa0803530:five_prime_UTR
AACTACACGGAAACAGAATT+TGG 0.282754 5_3:-18733505 Msa0803530:five_prime_UTR
TCGAATAGACTCAATGGTTC+TGG 0.298859 5_3:-18734163 Msa0803530:five_prime_UTR
ATATACTGCATCTACATAAC+TGG 0.302230 5_3:-18732884 Msa0803530:five_prime_UTR
ACTTGATAAGGTGAAGAAAT+TGG 0.303386 5_3:-18734636 Msa0803530:five_prime_UTR
GTTCAGTTCAGATATTATTA+TGG 0.304445 5_3:-18736425 Msa0803530:five_prime_UTR
GGCATCTGACTTTAGAAGTT+TGG 0.306934 5_3:-18734118 Msa0803530:five_prime_UTR
GTGGATGGAATTCCCAAAAT+AGG 0.307227 5_3:+18736379 None:intergenic
GCAGGAAGTGAAATGGGTTT+TGG 0.319827 5_3:+18736349 None:intergenic
CATTATTCTTCGTTTCCATT+TGG 0.324608 5_3:+18727284 None:intergenic
TACCGAGCAACCAGATAAAT+TGG 0.337104 5_3:-18732279 Msa0803530:five_prime_UTR
GAACCTACTTTAAACGTTCA+TGG 0.345615 5_3:-18730603 Msa0803530:exon
TTACGAACAATTGCATGCTT+TGG 0.345723 5_3:+18730642 None:intergenic
GTGGATTGTCAGTAATATTC+TGG 0.362916 5_3:+18732503 None:intergenic
CAAATGGAAACGAAGAATAA+TGG 0.372793 5_3:-18727283 Msa0803530:CDS
TTCAGCCGCGAGATGATATA+TGG 0.375404 5_3:-18733236 Msa0803530:five_prime_UTR
TTGCATTGCTGCAGCGGCTC+GGG 0.395207 5_3:-18729979 Msa0803530:CDS
TTATGTAGATGCAGTATATC+AGG 0.409774 5_3:+18732888 None:intergenic
TTTAATGCTGAAAATATGAA+TGG 0.412437 5_3:-18730019 Msa0803530:CDS
ATTCTTCGTTTCCATTTGGA+TGG 0.413455 5_3:+18727288 None:intergenic
ATTTACCTTTCAAAATCATC+CGG 0.418216 5_3:+18733209 None:intergenic
GACAGTGTTGTTTATGGCAT+TGG 0.424587 5_3:-18733296 Msa0803530:intron
GTTGCATTGCTGCAGCGGCT+CGG 0.427566 5_3:-18729980 Msa0803530:CDS
AGAAAGAGCAGGAAGTGAAA+TGG 0.430473 5_3:+18736342 None:intergenic
CTAAAGTCAGATGCCTCTGC+AGG 0.431082 5_3:+18734126 None:intergenic
CAATGGCACATGATTTATCA+TGG 0.442232 5_3:-18727257 Msa0803530:CDS
CAGCAATGCAACTTTGCAAA+CGG 0.442930 5_3:+18729991 None:intergenic
CGAATAGACTCAATGGTTCT+GGG 0.446076 5_3:-18734162 Msa0803530:five_prime_UTR
ACAAATACATCCCAGAAAAG+AGG 0.446820 5_3:+18732843 None:intergenic
GTGTTGTCTTGCAGACGATC+AGG 0.451846 5_3:+18732221 None:intergenic
AAAACAGTCCATACTTGATA+AGG 0.452733 5_3:-18734648 Msa0803530:five_prime_UTR
GAAAGAGCAGGAAGTGAAAT+GGG 0.464771 5_3:+18736343 None:intergenic
GAAATTGGAAGCAGAAAAGC+AGG 0.476154 5_3:-18734621 Msa0803530:five_prime_UTR
GTCTATTCGAAGCAGCAATT+CGG 0.478768 5_3:+18734176 None:intergenic
CTGGGATGTATTTGTAAACA+AGG 0.481061 5_3:-18732835 Msa0803530:intron
CCAGATAAATTGGCCTTATG+TGG 0.481098 5_3:-18732269 Msa0803530:five_prime_UTR
AACCTACTTTAAACGTTCAT+GGG 0.483206 5_3:-18730602 Msa0803530:intron
TGAAGGATCAAGTCCACATA+AGG 0.487693 5_3:+18732256 None:intergenic
TGCTAAGAAGCACGATGTCC+AGG 0.490194 5_3:-18729691 Msa0803530:CDS
AGTCACTTTGATCGAGCCAT+TGG 0.490663 5_3:-18733273 Msa0803530:five_prime_UTR
TAAAAGAGATTCTGAACTTG+TGG 0.495789 5_3:-18734046 Msa0803530:five_prime_UTR
GCAAAGTTGCATTGCTGCAG+CGG 0.496482 5_3:-18729985 Msa0803530:CDS
GCAAACCTTGCACTTCATCT+AGG 0.502530 5_3:+18733567 None:intergenic
CCTTTGTTCATGTAAGCCAC+TGG 0.505735 5_3:+18735760 None:intergenic
GAACAATTGCATGCTTTGGA+TGG 0.510737 5_3:+18730646 None:intergenic
CAAATACATCCCAGAAAAGA+GGG 0.510868 5_3:+18732844 None:intergenic
AAAAGAGATTCTGAACTTGT+GGG 0.511266 5_3:-18734045 Msa0803530:five_prime_UTR
TTCTTCGTTTCCATTTGGAT+GGG 0.513572 5_3:+18727289 None:intergenic
TCAGGACGATGAAGACTTGA+AGG 0.514225 5_3:+18732239 None:intergenic
GGCCAATTTATCTGGTTGCT+CGG 0.515098 5_3:+18732277 None:intergenic
GCTGCTTCGAATAGACTCAA+TGG 0.516345 5_3:-18734169 Msa0803530:five_prime_UTR
TTGAAGTGCACGAGATATGC+CGG 0.518996 5_3:+18733775 None:intergenic
AGAGGAGTAACCCATCCAAA+TGG 0.524697 5_3:-18727299 Msa0803530:CDS
CACGGAAACAGAATTTGGAC+TGG 0.525626 5_3:-18733500 Msa0803530:five_prime_UTR
CTTACTGGGGTTTCATCAGT+AGG 0.525772 5_3:+18728502 None:intergenic
CTATCGCATTTATTATTCGC+AGG 0.527294 5_3:-18728559 Msa0803530:CDS
CTGGATTATATAGTAAAATG+TGG 0.532303 5_3:-18732918 Msa0803530:five_prime_UTR
GCAGAAAAGCAGGAGAGTGC+TGG 0.544427 5_3:-18734611 Msa0803530:intron
TTTCACATTCTGGCCATCAT+CGG 0.546409 5_3:+18734866 None:intergenic
TACCCATGAACGTTTAAAGT+AGG 0.547654 5_3:+18730600 None:intergenic
TTTACCTTTCAAAATCATCC+GGG 0.554754 5_3:+18733210 None:intergenic
CAGTTCAGATATTATTATGG+TGG 0.555819 5_3:-18736422 Msa0803530:five_prime_UTR
CCAGAAAAGAGGGGCAACAA+TGG 0.557663 5_3:+18732854 None:intergenic
GCTATAAAGAATATGTGAAG+TGG 0.567967 5_3:-18727195 Msa0803530:exon
TTGCACAGAAATGACACCAT+TGG 0.568090 5_3:-18733828 Msa0803530:five_prime_UTR
TATTGATGAGCAAAAGATGA+AGG 0.573360 5_3:-18729727 Msa0803530:CDS
ACGAAGAATAATGGAAGCAA+TGG 0.575742 5_3:-18727274 Msa0803530:CDS
TTACTCAAGAGAAGGAAAGC+CGG 0.582749 5_3:-18727024 Msa0803530:three_prime_UTR
TGGATTATATAGTAAAATGT+GGG 0.588602 5_3:-18732917 Msa0803530:five_prime_UTR
TACCTGAAACAAGAAAGAGC+AGG 0.590229 5_3:+18736331 None:intergenic
AAGTAATCTTACTCAAGAGA+AGG 0.590473 5_3:-18727032 Msa0803530:three_prime_UTR
CTATAAAGAATATGTGAAGT+GGG 0.591922 5_3:-18727194 Msa0803530:exon
TCTCGTGCACTTCAAAGAAG+AGG 0.594996 5_3:-18733767 Msa0803530:five_prime_UTR
CGAGATGATATATGGTTACC+CGG 0.598351 5_3:-18733228 Msa0803530:five_prime_UTR
AATGGCACATGATTTATCAT+GGG 0.600151 5_3:-18727256 Msa0803530:CDS
TTTGCGTGAAGTTAATGTGG+AGG 0.602795 5_3:-18733549 Msa0803530:five_prime_UTR
ATGACACCATTGGTCTCTAG+AGG 0.613080 5_3:-18733818 Msa0803530:five_prime_UTR
TCTGTAGCATCATATGTCAC+CGG 0.613923 5_3:-18733794 Msa0803530:five_prime_UTR
TAACTTGTGAAGTGAAGTCG+TGG 0.614928 5_3:+18732484 None:intergenic
AGGAATAATGGAGATGCCAG+TGG 0.617265 5_3:-18735776 Msa0803530:five_prime_UTR
CTATATAATCCAGTGAGGCA+CGG 0.622187 5_3:+18732928 None:intergenic
TACTTAAACAATCAACGCCT+AGG 0.622287 5_3:-18734704 Msa0803530:five_prime_UTR
AAGAAGAGGTCACCTTGCAG+AGG 0.630448 5_3:-18733753 Msa0803530:five_prime_UTR
ACAGATCCTCTAGAGACCAA+TGG 0.632704 5_3:+18733812 None:intergenic
TCGTGAGGCTAACAAAGTTG+CGG 0.633006 5_3:+18726992 None:intergenic
TAAGTTCCTCGATGGCACCT+AGG 0.634666 5_3:+18734687 None:intergenic
TATACTGCATCTACATAACT+GGG 0.635009 5_3:-18732883 Msa0803530:five_prime_UTR
AGGTTTGCGTGAAGTTAATG+TGG 0.636364 5_3:-18733552 Msa0803530:five_prime_UTR
CAACGTAATTAGCCCTGCAG+AGG 0.638433 5_3:-18734139 Msa0803530:five_prime_UTR
GCACATGATTTATCATGGGA+TGG 0.639732 5_3:-18727252 Msa0803530:CDS
TAAAGTCAGATGCCTCTGCA+GGG 0.645324 5_3:+18734127 None:intergenic
CCAGTGGCTTACATGAACAA+AGG 0.659287 5_3:-18735760 Msa0803530:intron
ACGGAAACAGAATTTGGACT+GGG 0.664781 5_3:-18733499 Msa0803530:intron
TTAGACCTAGATGAAGTGCA+AGG 0.665231 5_3:-18733572 Msa0803530:five_prime_UTR
TGGGCAATATAACCTCTGCA+AGG 0.682783 5_3:+18733741 None:intergenic
AAATACATCCCAGAAAAGAG+GGG 0.692339 5_3:+18732845 None:intergenic
GGTAACCATATATCATCTCG+CGG 0.696327 5_3:+18733231 None:intergenic
GTTACACCATAAAGTGAGTG+TGG 0.697281 5_3:-18734094 Msa0803530:five_prime_UTR
TCAACGCCTAGGTGCCATCG+AGG 0.714135 5_3:-18734693 Msa0803530:five_prime_UTR
TGAATGCTACGAAGTTCATG+TGG 0.756833 5_3:-18727229 Msa0803530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATTCATAATTTAGATTA+TGG - chr5_3:18727200-18727219 Msa0803530:CDS 10.0%
!!! TCCAATATTTTTATTTTTTT+TGG - chr5_3:18728132-18728151 Msa0803530:intron 10.0%
!! TCCAAAAAAAATAAAAATAT+TGG + chr5_3:18728136-18728155 None:intergenic 10.0%
!!! ATTTTTTGTTTAGTAATTTT+TGG - chr5_3:18728679-18728698 Msa0803530:intron 10.0%
!!! ACAATTTTTTTATACATAAT+AGG + chr5_3:18730440-18730459 None:intergenic 10.0%
!! AAATTAATCAATTAATATTG+AGG + chr5_3:18731420-18731439 None:intergenic 10.0%
!!! TTATTTTCTTAAATTATTAC+TGG + chr5_3:18731838-18731857 None:intergenic 10.0%
!!! TTCATTATTTAAATTTTATC+AGG - chr5_3:18733659-18733678 Msa0803530:intron 10.0%
!!! TTAAAAGTGCTTAAAAATTA+GGG + chr5_3:18727509-18727528 None:intergenic 15.0%
!!! TTTAAAAGTGCTTAAAAATT+AGG + chr5_3:18727510-18727529 None:intergenic 15.0%
!!! AGCACTTTTAAAATTTATTA+AGG - chr5_3:18727518-18727537 Msa0803530:intron 15.0%
!!! GCACTTTTAAAATTTATTAA+GGG - chr5_3:18727519-18727538 Msa0803530:intron 15.0%
!!! ATTTTTTATAATGTGTTTTC+AGG - chr5_3:18727641-18727660 Msa0803530:intron 15.0%
!! ATACAATTAAAAAGAAAAGA+AGG + chr5_3:18727706-18727725 None:intergenic 15.0%
!!! TTTATTTTTTTTGGAAAACT+CGG - chr5_3:18728141-18728160 Msa0803530:intron 15.0%
!! GTTATAATTAGTTAGTTATT+TGG + chr5_3:18728443-18728462 None:intergenic 15.0%
!! CATTAATTTCTTAATTACTT+GGG + chr5_3:18729718-18729737 None:intergenic 15.0%
!! ACATTAATTTCTTAATTACT+TGG + chr5_3:18729719-18729738 None:intergenic 15.0%
!! AATATGAATGTTAAATAACA+TGG - chr5_3:18730007-18730026 Msa0803530:CDS 15.0%
!!! TTTTTATAGAGAATAAAAGT+GGG + chr5_3:18731303-18731322 None:intergenic 15.0%
!!! ATTTTTATAGAGAATAAAAG+TGG + chr5_3:18731304-18731323 None:intergenic 15.0%
!!! CAATATTTTACTAATGAATT+AGG + chr5_3:18731508-18731527 None:intergenic 15.0%
!! CTAATTCATTAGTAAAATAT+TGG - chr5_3:18731506-18731525 Msa0803530:intron 15.0%
!!! TTTTAGCTTATTTCTTTTAT+TGG + chr5_3:18732092-18732111 None:intergenic 15.0%
!! AAAAATTTGACAATAGTATA+TGG - chr5_3:18732161-18732180 Msa0803530:intron 15.0%
!! TTGTTTAAATGTTTGATAAA+GGG - chr5_3:18732896-18732915 Msa0803530:five_prime_UTR 15.0%
!!! TATACTACAAAAATTTGTTT+AGG - chr5_3:18733048-18733067 Msa0803530:intron 15.0%
!!! TTGATTTTATTCTTTGTTAT+AGG - chr5_3:18733190-18733209 Msa0803530:intron 15.0%
!!! CTTTTTCTTAGTATTTAAAA+TGG - chr5_3:18733296-18733315 Msa0803530:intron 15.0%
!! TCATATATATTATATAGTAC+TGG + chr5_3:18733597-18733616 None:intergenic 15.0%
!!! TATGATATTGCAAATATTTT+TGG - chr5_3:18733612-18733631 Msa0803530:intron 15.0%
!!! TTATTTAAATTTTATCAGGT+TGG - chr5_3:18733663-18733682 Msa0803530:intron 15.0%
!! AATATGAAGTCTAATTATAA+GGG + chr5_3:18733803-18733822 None:intergenic 15.0%
!! TAATATGAAGTCTAATTATA+AGG + chr5_3:18733804-18733823 None:intergenic 15.0%
!! TTCATATTAAACATGATTAA+AGG - chr5_3:18733815-18733834 Msa0803530:five_prime_UTR 15.0%
!! TCATATTAAACATGATTAAA+GGG - chr5_3:18733816-18733835 Msa0803530:five_prime_UTR 15.0%
!!! TATTTTTTCTTTAACTTTGT+AGG - chr5_3:18734102-18734121 Msa0803530:five_prime_UTR 15.0%
!! GTCTAAATAAATATTACTAT+TGG + chr5_3:18734768-18734787 None:intergenic 15.0%
!!! TAAACAAATTTGATTTTAAG+CGG - chr5_3:18735059-18735078 Msa0803530:intron 15.0%
!!! ATTTACTATTTTGAGATATA+TGG - chr5_3:18736313-18736332 Msa0803530:intron 15.0%
!! ATGAAAGTTATTGAAAAAGT+GGG + chr5_3:18727143-18727162 None:intergenic 20.0%
!! GTTGATATAGAAAATAAATG+AGG - chr5_3:18727229-18727248 Msa0803530:CDS 20.0%
!!! TTTGAACAGTTTTTTAAAAG+TGG - chr5_3:18727275-18727294 Msa0803530:CDS 20.0%
!!! AGCTCTATTGTTTAATTTTT+AGG - chr5_3:18727315-18727334 Msa0803530:intron 20.0%
!!! GCTCTATTGTTTAATTTTTA+GGG - chr5_3:18727316-18727335 Msa0803530:intron 20.0%
!! TAAGGAATAATTTCTTCATT+AGG + chr5_3:18727380-18727399 None:intergenic 20.0%
!!! GAAGTCTATACTTTTTTTTA+AGG + chr5_3:18727398-18727417 None:intergenic 20.0%
!! GTTAAAGGTTAATAAAAATG+AGG - chr5_3:18727785-18727804 Msa0803530:intron 20.0%
!! TAAACAACACAACATATTAT+TGG + chr5_3:18728066-18728085 None:intergenic 20.0%
!!! TATTAAAAGCATTTGTTCTT+CGG + chr5_3:18728273-18728292 None:intergenic 20.0%
!!! AAATGCTTTTAATAAGAAGT+TGG - chr5_3:18728279-18728298 Msa0803530:intron 20.0%
!! TATTCACAAACTTTACAAAT+CGG - chr5_3:18728361-18728380 Msa0803530:intron 20.0%
!! AATGACTAAAATAAAAAGGA+AGG + chr5_3:18728549-18728568 None:intergenic 20.0%
!! GGATAATGACTAAAATAAAA+AGG + chr5_3:18728553-18728572 None:intergenic 20.0%
!! ATGTGAAACATGATAATATT+TGG - chr5_3:18728586-18728605 Msa0803530:CDS 20.0%
!!! TAACGAAAATTTTGATAAAG+TGG - chr5_3:18728965-18728984 Msa0803530:intron 20.0%
!! CAAAACTATGGTAATTAAAT+AGG + chr5_3:18729982-18730001 None:intergenic 20.0%
!! TCATATTATATGCAAAACTA+TGG + chr5_3:18729994-18730013 None:intergenic 20.0%
!!! TGTTTAAAATATACTGATGT+TGG - chr5_3:18730091-18730110 Msa0803530:intron 20.0%
!!! AGTTTTGTTATACAAATATC+TGG - chr5_3:18730256-18730275 Msa0803530:intron 20.0%
!!! GTTTTGTTATACAAATATCT+GGG - chr5_3:18730257-18730276 Msa0803530:intron 20.0%
!!! TTTTTTTTAACACAGTTTGA+AGG + chr5_3:18730388-18730407 None:intergenic 20.0%
!! TGGATTATATAGTAAAATGT+GGG - chr5_3:18730520-18730539 Msa0803530:intron 20.0%
!!! TTTTCATAATTTCTGTGTAT+TGG - chr5_3:18730644-18730663 Msa0803530:five_prime_UTR 20.0%
!!! AGATGGAATTTTCTTTTAAT+TGG - chr5_3:18731042-18731061 Msa0803530:intron 20.0%
!!! AAACTACATTTAGTTTGTAA+CGG - chr5_3:18731070-18731089 Msa0803530:intron 20.0%
!!! ACAACTTGTAAATATTTTGA+AGG - chr5_3:18731245-18731264 Msa0803530:intron 20.0%
!! TTATATTGAGTTTACTTTGT+TGG - chr5_3:18731606-18731625 Msa0803530:intron 20.0%
!!! AATATCTAGAACTAAGATAT+AGG + chr5_3:18731997-18732016 None:intergenic 20.0%
!! TCTATAAAAAGAATACAATG+TGG + chr5_3:18732047-18732066 None:intergenic 20.0%
!! CTTGTTTAAATGTTTGATAA+AGG - chr5_3:18732895-18732914 Msa0803530:five_prime_UTR 20.0%
!!! AAAGTTAATATTGATTTGCA+GGG + chr5_3:18732939-18732958 None:intergenic 20.0%
!!! TAAAGTTAATATTGATTTGC+AGG + chr5_3:18732940-18732959 None:intergenic 20.0%
!!! AATTTTTGTAGTATATAACC+AGG + chr5_3:18733043-18733062 None:intergenic 20.0%
!!! AATAAGTTGAAAACAACTTA+TGG + chr5_3:18733107-18733126 None:intergenic 20.0%
!! TTTGGATAAACATTTCAATT+AGG + chr5_3:18733250-18733269 None:intergenic 20.0%
!! GATAATGATATTTGATTGTA+GGG - chr5_3:18733318-18733337 Msa0803530:intron 20.0%
!!! TTTTCAGCATTAAAATTTTC+TGG + chr5_3:18733412-18733431 None:intergenic 20.0%
!! TTTAATGCTGAAAATATGAA+TGG - chr5_3:18733418-18733437 Msa0803530:intron 20.0%
!!! TTTTGGATGATTTTTTACTT+AGG - chr5_3:18733629-18733648 Msa0803530:intron 20.0%
!! ATCAATATTAATGAACAAGA+TGG + chr5_3:18733862-18733881 None:intergenic 20.0%
!! AAAAGACAGAAAATAATGTA+AGG - chr5_3:18734017-18734036 Msa0803530:five_prime_UTR 20.0%
!!! AACTTTTACCTATTTACAAA+TGG + chr5_3:18734046-18734065 None:intergenic 20.0%
!! AGTTCATATGCAATTTAATT+AGG - chr5_3:18734062-18734081 Msa0803530:five_prime_UTR 20.0%
!! GTTCATATGCAATTTAATTA+GGG - chr5_3:18734063-18734082 Msa0803530:five_prime_UTR 20.0%
!! TTCATATGCAATTTAATTAG+GGG - chr5_3:18734064-18734083 Msa0803530:five_prime_UTR 20.0%
!!! ATAATGAAAATCAAGAGTAT+AGG + chr5_3:18734550-18734569 None:intergenic 20.0%
!!! AAGTTGATAAAAATCAAAGT+TGG + chr5_3:18734991-18735010 None:intergenic 20.0%
!! ATAAGTCACAAATATTCTTA+AGG + chr5_3:18735350-18735369 None:intergenic 20.0%
!! TTTATGAAGTTCCTATTAAA+AGG + chr5_3:18735431-18735450 None:intergenic 20.0%
!! TGTGTACACAATATTAATTA+GGG + chr5_3:18735724-18735743 None:intergenic 20.0%
!! TTGTGTACACAATATTAATT+AGG + chr5_3:18735725-18735744 None:intergenic 20.0%
!! AAAGTAGAAGTGATTATATA+TGG + chr5_3:18735988-18736007 None:intergenic 20.0%
!!! ATTAGTTATTGACTTTGATA+TGG - chr5_3:18736111-18736130 Msa0803530:intron 20.0%
!!! TTAGTTATTGACTTTGATAT+GGG - chr5_3:18736112-18736131 Msa0803530:intron 20.0%
! GTTCAGTTCAGATATTATTA+TGG - chr5_3:18727012-18727031 Msa0803530:three_prime_UTR 25.0%
! GATGAAAGTTATTGAAAAAG+TGG + chr5_3:18727144-18727163 None:intergenic 25.0%
! AAAACTGTTCAAAAATTCTC+TGG + chr5_3:18727268-18727287 None:intergenic 25.0%
! TCATAAAACCTTACTACTTT+AGG - chr5_3:18727447-18727466 Msa0803530:intron 25.0%
! AACTACAAGCTAATTTAACT+TGG - chr5_3:18727595-18727614 Msa0803530:intron 25.0%
!!! TAATGTGTTTTCAGGAATAA+TGG - chr5_3:18727649-18727668 Msa0803530:intron 25.0%
!!! TTTTGGAATATCTGTATCTT+AGG - chr5_3:18727763-18727782 Msa0803530:intron 25.0%
! ATATCTGTATCTTAGGTTAA+AGG - chr5_3:18727770-18727789 Msa0803530:intron 25.0%
! TGGTTTATGATCGAATATTA+TGG - chr5_3:18727856-18727875 Msa0803530:intron 25.0%
! GAAAAGTTAGGATAGTAAAA+GGG + chr5_3:18728094-18728113 None:intergenic 25.0%
! TGAAAAGTTAGGATAGTAAA+AGG + chr5_3:18728095-18728114 None:intergenic 25.0%
! TAATAAGAAGTTGGAAAGAA+TGG - chr5_3:18728288-18728307 Msa0803530:intron 25.0%
! AATAAGAAGTTGGAAAGAAT+GGG - chr5_3:18728289-18728308 Msa0803530:intron 25.0%
! ACTGCAAGAATATAGAATAA+TGG + chr5_3:18728497-18728516 None:intergenic 25.0%
! TATTATCATGTTTCACATTC+TGG + chr5_3:18728584-18728603 None:intergenic 25.0%
! TCTTTGTATAAACTTCATTC+AGG - chr5_3:18729563-18729582 Msa0803530:intron 25.0%
!!! GAGGTTTACTCATATTTTAA+TGG - chr5_3:18729907-18729926 Msa0803530:intron 25.0%
!!! TATTTTAATGGTCAACTACA+CGG - chr5_3:18729919-18729938 Msa0803530:intron 25.0%
!! ATTAATTCTTTTATCACCAC+CGG + chr5_3:18730034-18730053 None:intergenic 25.0%
! ATTTACCTTTCAAAATCATC+CGG + chr5_3:18730231-18730250 None:intergenic 25.0%
!! TCTCTATCAAAATGATGTTT+TGG - chr5_3:18730336-18730355 Msa0803530:intron 25.0%
!! TTTTACTATATAATCCAGTG+AGG + chr5_3:18730517-18730536 None:intergenic 25.0%
! CTGGATTATATAGTAAAATG+TGG - chr5_3:18730519-18730538 Msa0803530:intron 25.0%
!!! TTCTATAAAGCTTTTGCTAT+TGG - chr5_3:18730671-18730690 Msa0803530:five_prime_UTR 25.0%
!!! TCTATAAAGCTTTTGCTATT+GGG - chr5_3:18730672-18730691 Msa0803530:five_prime_UTR 25.0%
!!! TTCAATCGTTTGTTTTGTTT+AGG - chr5_3:18730899-18730918 Msa0803530:intron 25.0%
!!! TCAATCGTTTGTTTTGTTTA+GGG - chr5_3:18730900-18730919 Msa0803530:intron 25.0%
!! ATTCGATATGCATTTTGTAT+TGG - chr5_3:18730993-18731012 Msa0803530:intron 25.0%
!! TTCGATATGCATTTTGTATT+GGG - chr5_3:18730994-18731013 Msa0803530:intron 25.0%
!! ATGTTTTCATTTGATCATGT+CGG - chr5_3:18731098-18731117 Msa0803530:intron 25.0%
!!! TTTCCATCTATTTCTTTTGT+TGG - chr5_3:18731639-18731658 Msa0803530:intron 25.0%
! TTTATCAGATGACATAATCT+TGG + chr5_3:18731673-18731692 None:intergenic 25.0%
! TCTTATTGAAAATATCGAAG+AGG - chr5_3:18732016-18732035 Msa0803530:intron 25.0%
!!! TAGCTTATTTCTTTTATTGG+CGG + chr5_3:18732089-18732108 None:intergenic 25.0%
! AAGATGAAATTTGTAGATAG+AGG - chr5_3:18732222-18732241 Msa0803530:five_prime_UTR 25.0%
! AGATGAAATTTGTAGATAGA+GGG - chr5_3:18732223-18732242 Msa0803530:five_prime_UTR 25.0%
! AGAATTAGAAATACGACTAT+TGG - chr5_3:18732522-18732541 Msa0803530:intron 25.0%
!! TTTCAACATAGAATTTGTTC+TGG - chr5_3:18732963-18732982 Msa0803530:intron 25.0%
!! TGTTCTGGTTAATAATATGT+TGG - chr5_3:18732978-18732997 Msa0803530:intron 25.0%
!! TGTTGGTTAGTTACTTTAAA+AGG - chr5_3:18732995-18733014 Msa0803530:intron 25.0%
! ATTGAAATGTTTATCCAAAC+AGG - chr5_3:18733251-18733270 Msa0803530:five_prime_UTR 25.0%
! TTGAAATGTTTATCCAAACA+GGG - chr5_3:18733252-18733271 Msa0803530:five_prime_UTR 25.0%
! AATACTAAGAAAAAGTCAGA+GGG + chr5_3:18733291-18733310 None:intergenic 25.0%
! AAATACTAAGAAAAAGTCAG+AGG + chr5_3:18733292-18733311 None:intergenic 25.0%
! GGATAATGATATTTGATTGT+AGG - chr5_3:18733317-18733336 Msa0803530:intron 25.0%
!!! TTAAAGAAGCTGTTCTAAAA+GGG + chr5_3:18733558-18733577 None:intergenic 25.0%
!! TTTAAAGAAGCTGTTCTAAA+AGG + chr5_3:18733559-18733578 None:intergenic 25.0%
!!! CTTTTTTAAAATTCGGTATC+CGG - chr5_3:18733965-18733984 Msa0803530:intron 25.0%
! AAATTAAAAAATGACAGCTG+TGG - chr5_3:18734164-18734183 Msa0803530:five_prime_UTR 25.0%
! AATTAAAAAATGACAGCTGT+GGG - chr5_3:18734165-18734184 Msa0803530:five_prime_UTR 25.0%
! ATAGAAGATCATGATTCAAA+TGG - chr5_3:18734402-18734421 Msa0803530:intron 25.0%
! TTAACAAGTACTAATAGCTT+CGG - chr5_3:18734643-18734662 Msa0803530:five_prime_UTR 25.0%
! AAGTTAATCAACAATACCTT+TGG - chr5_3:18735479-18735498 Msa0803530:intron 25.0%
! ACTACATACAATTTCATCAA+TGG + chr5_3:18735525-18735544 None:intergenic 25.0%
! ATGAAATTGTATGTAGTTTC+TGG - chr5_3:18735528-18735547 Msa0803530:intron 25.0%
! GTGTACACAATATTAATTAG+GGG + chr5_3:18735723-18735742 None:intergenic 25.0%
! CATTTATGACAGTTGTTAAT+AGG - chr5_3:18735762-18735781 Msa0803530:five_prime_UTR 25.0%
! TGTTAATAGGCAATAGTTAA+AGG - chr5_3:18735775-18735794 Msa0803530:five_prime_UTR 25.0%
! GTTAATAGGCAATAGTTAAA+GGG - chr5_3:18735776-18735795 Msa0803530:five_prime_UTR 25.0%
! TTAATAGGCAATAGTTAAAG+GGG - chr5_3:18735777-18735796 Msa0803530:five_prime_UTR 25.0%
! TGTACATATTCATTCATTGA+TGG - chr5_3:18735820-18735839 Msa0803530:intron 25.0%
! TGATTATATATGGATCGTAT+CGG + chr5_3:18735978-18735997 None:intergenic 25.0%
! CTACTTTAGTAAACTATCAT+TGG - chr5_3:18736001-18736020 Msa0803530:intron 25.0%
! CTATAAAGAATATGTGAAGT+GGG - chr5_3:18736243-18736262 Msa0803530:intron 25.0%
CAGTTCAGATATTATTATGG+TGG - chr5_3:18727015-18727034 Msa0803530:three_prime_UTR 30.0%
! AACTCAACTATGCCTATTTT+GGG - chr5_3:18727046-18727065 Msa0803530:three_prime_UTR 30.0%
TTTAAGCACCTAAAGTAGTA+AGG + chr5_3:18727458-18727477 None:intergenic 30.0%
TCCAAAATTAGTTGCCAAAT+AGG + chr5_3:18727750-18727769 None:intergenic 30.0%
AGACACACAATTAGAAACAA+AGG + chr5_3:18727830-18727849 None:intergenic 30.0%
! CTAATTGTGTGTCTGAAATA+TGG - chr5_3:18727836-18727855 Msa0803530:intron 30.0%
TATTGCGTGTCTTATAGTTA+AGG - chr5_3:18727925-18727944 Msa0803530:intron 30.0%
AATCTACCATACTTACATTC+TGG - chr5_3:18727990-18728009 Msa0803530:intron 30.0%
!!! TCCTAACTTTTCAAGTGTTT+CGG - chr5_3:18728102-18728121 Msa0803530:intron 30.0%
AGTATCAACTCTATTGTGAA+GGG + chr5_3:18728340-18728359 None:intergenic 30.0%
! TTTTAGTCATTATCCGATGA+TGG - chr5_3:18728558-18728577 Msa0803530:CDS 30.0%
AAAACAGTCCATACTTGATA+AGG - chr5_3:18728789-18728808 Msa0803530:intron 30.0%
TTTCTTCACCTTATCAAGTA+TGG + chr5_3:18728800-18728819 None:intergenic 30.0%
ACTTGATAAGGTGAAGAAAT+TGG - chr5_3:18728801-18728820 Msa0803530:intron 30.0%
! ATTTGTTAGTAACAGTCTCT+AGG - chr5_3:18728877-18728896 Msa0803530:intron 30.0%
! GAACAAATTGATAGCTTATC+TGG + chr5_3:18729242-18729261 None:intergenic 30.0%
TAAAAGAGATTCTGAACTTG+TGG - chr5_3:18729391-18729410 Msa0803530:intron 30.0%
AAAAGAGATTCTGAACTTGT+GGG - chr5_3:18729392-18729411 Msa0803530:intron 30.0%
GTATAAACTTCATTCAGGAA+TGG - chr5_3:18729568-18729587 Msa0803530:intron 30.0%
GAATGTTAAATAACATGGAC+CGG - chr5_3:18730012-18730031 Msa0803530:CDS 30.0%
TTTACCTTTCAAAATCATCC+GGG + chr5_3:18730230-18730249 None:intergenic 30.0%
AATATCTGGGAAAAAGTCAT+TGG - chr5_3:18730270-18730289 Msa0803530:intron 30.0%
TTATGTAGATGCAGTATATC+AGG + chr5_3:18730552-18730571 None:intergenic 30.0%
ATATACTGCATCTACATAAC+TGG - chr5_3:18730553-18730572 Msa0803530:intron 30.0%
TATACTGCATCTACATAACT+GGG - chr5_3:18730554-18730573 Msa0803530:intron 30.0%
!!! TTTTGCTATTGGGAGAATAT+TGG - chr5_3:18730682-18730701 Msa0803530:five_prime_UTR 30.0%
GAGAAAAACGTTAACTTCAA+AGG - chr5_3:18730777-18730796 Msa0803530:intron 30.0%
ATCTTGATACTTCTTCAAGA+TGG - chr5_3:18731025-18731044 Msa0803530:intron 30.0%
TTATAGAGAATAAAAGTGGG+TGG + chr5_3:18731300-18731319 None:intergenic 30.0%
TAGTATTCAAAAAGCCATTG+CGG - chr5_3:18731331-18731350 Msa0803530:intron 30.0%
GAACTAGATTTACTGATAAG+GGG + chr5_3:18731380-18731399 None:intergenic 30.0%
GGAACTAGATTTACTGATAA+GGG + chr5_3:18731381-18731400 None:intergenic 30.0%
AGGAACTAGATTTACTGATA+AGG + chr5_3:18731382-18731401 None:intergenic 30.0%
! TATCAGTAAATCTAGTTCCT+TGG - chr5_3:18731382-18731401 Msa0803530:intron 30.0%
TTGATGTCTATAGTAAGCAA+TGG - chr5_3:18731482-18731501 Msa0803530:intron 30.0%
GAACCAACAAAAGAAATAGA+TGG + chr5_3:18731645-18731664 None:intergenic 30.0%
ATGAAAAACTTACTCAGACA+TGG - chr5_3:18731784-18731803 Msa0803530:intron 30.0%
! TTATTACTGGTGTTTTGTGT+CGG + chr5_3:18731825-18731844 None:intergenic 30.0%
TATTGAAAATATCGAAGAGG+TGG - chr5_3:18732019-18732038 Msa0803530:intron 30.0%
TATGGAATGCAAGTTTAACA+AGG - chr5_3:18732179-18732198 Msa0803530:intron 30.0%
ATGGAATGCAAGTTTAACAA+GGG - chr5_3:18732180-18732199 Msa0803530:intron 30.0%
TCCATCATACAAATTGAACA+TGG - chr5_3:18732246-18732265 Msa0803530:five_prime_UTR 30.0%
ACCATGTTCAATTTGTATGA+TGG + chr5_3:18732250-18732269 None:intergenic 30.0%
AATTGAACATGGTGATATAG+AGG - chr5_3:18732257-18732276 Msa0803530:five_prime_UTR 30.0%
ATTGAACATGGTGATATAGA+GGG - chr5_3:18732258-18732277 Msa0803530:five_prime_UTR 30.0%
TTCAACCATAGGATTCAATT+AGG - chr5_3:18732285-18732304 Msa0803530:intron 30.0%
TCAACCATAGGATTCAATTA+GGG - chr5_3:18732286-18732305 Msa0803530:intron 30.0%
TTGAAATAGAACCTACTGTT+CGG - chr5_3:18732342-18732361 Msa0803530:intron 30.0%
TATGTTTCATGCAAGATTTC+AGG + chr5_3:18732413-18732432 None:intergenic 30.0%
GCATGAAACATAATGTTAGT+CGG - chr5_3:18732421-18732440 Msa0803530:intron 30.0%
TCACAAAACATCACTACAAT+GGG + chr5_3:18732567-18732586 None:intergenic 30.0%
ATCACAAAACATCACTACAA+TGG + chr5_3:18732568-18732587 None:intergenic 30.0%
! TTTTATTCTGTCGCATAAGA+TGG + chr5_3:18732633-18732652 None:intergenic 30.0%
AACCTACTTTAAACGTTCAT+GGG - chr5_3:18732835-18732854 Msa0803530:intron 30.0%
TATAACCAGGTTATACAGAT+AGG + chr5_3:18733030-18733049 None:intergenic 30.0%
! TTTTCATAAGCTATCTTGGA+GGG + chr5_3:18733137-18733156 None:intergenic 30.0%
! GTTGATTTCTCAAATCCATA+AGG + chr5_3:18733361-18733380 None:intergenic 30.0%
ATGGATTTGAGAAATCAACA+TGG - chr5_3:18733362-18733381 Msa0803530:intron 30.0%
TGGATTTGAGAAATCAACAT+GGG - chr5_3:18733363-18733382 Msa0803530:intron 30.0%
TCTTCTACTATTCTTGTAAG+TGG - chr5_3:18733493-18733512 Msa0803530:intron 30.0%
TATTGATGAGCAAAAGATGA+AGG - chr5_3:18733710-18733729 Msa0803530:intron 30.0%
!! AACTGTAAGTTTTGTAGAGA+TGG + chr5_3:18733775-18733794 None:intergenic 30.0%
ATGATTAAAGGGAAAACATG+AGG - chr5_3:18733827-18733846 Msa0803530:five_prime_UTR 30.0%
ACTTCTAACTGTTTGCTTAA+AGG - chr5_3:18733924-18733943 Msa0803530:intron 30.0%
CTTCTAACTGTTTGCTTAAA+GGG - chr5_3:18733925-18733944 Msa0803530:intron 30.0%
!! AATCATGTTTTTCGATCCTT+GGG + chr5_3:18733991-18734010 None:intergenic 30.0%
TAAGGAAGCCATTTGTAAAT+AGG - chr5_3:18734035-18734054 Msa0803530:five_prime_UTR 30.0%
ATATGCAATTTAATTAGGGG+AGG - chr5_3:18734067-18734086 Msa0803530:five_prime_UTR 30.0%
GTCTCCATAAATATAAACTG+CGG + chr5_3:18734466-18734485 None:intergenic 30.0%
ATCACTTCATATGGAATTCA+AGG - chr5_3:18734519-18734538 Msa0803530:intron 30.0%
ATATGTAGCTCAAAGCTTTA+AGG - chr5_3:18735269-18735288 Msa0803530:intron 30.0%
ATGTGAGTGTTACACAAATA+TGG + chr5_3:18735385-18735404 None:intergenic 30.0%
TCACATCATTCATATTTGCT+CGG - chr5_3:18735399-18735418 Msa0803530:intron 30.0%
ATACAATTTCATCAATGGCA+AGG + chr5_3:18735520-18735539 None:intergenic 30.0%
!!! GACACTTATTTTGAAACAGA+GGG + chr5_3:18735619-18735638 None:intergenic 30.0%
TAATAGGCAATAGTTAAAGG+GGG - chr5_3:18735778-18735797 Msa0803530:intron 30.0%
! GCAAAAACACATAGAGATTT+TGG + chr5_3:18736060-18736079 None:intergenic 30.0%
CATTATTCTTCGTTTCCATT+TGG + chr5_3:18736156-18736175 None:intergenic 30.0%
CAAATGGAAACGAAGAATAA+TGG - chr5_3:18736154-18736173 Msa0803530:intron 30.0%
AATGGCACATGATTTATCAT+GGG - chr5_3:18736181-18736200 Msa0803530:intron 30.0%
GCTATAAAGAATATGTGAAG+TGG - chr5_3:18736242-18736261 Msa0803530:intron 30.0%
AAGTAATCTTACTCAAGAGA+AGG - chr5_3:18736405-18736424 Msa0803530:five_prime_UTR 30.0%
! GAACTCAACTATGCCTATTT+TGG - chr5_3:18727045-18727064 Msa0803530:three_prime_UTR 35.0%
!!! AATGGGTTTTGGAAGAAAAG+TGG + chr5_3:18727080-18727099 None:intergenic 35.0%
! GCCTATTTGGCAACTAATTT+TGG - chr5_3:18727746-18727765 Msa0803530:intron 35.0%
TACAACAACAACAACCAAAG+TGG + chr5_3:18727907-18727926 None:intergenic 35.0%
!! AAACCCTTTTCTCTAGAAAC+CGG - chr5_3:18728030-18728049 Msa0803530:intron 35.0%
!! TATTATTGGTCTTAACCCTC+CGG + chr5_3:18728052-18728071 None:intergenic 35.0%
ACCGAAACACTTGAAAAGTT+AGG + chr5_3:18728106-18728125 None:intergenic 35.0%
! TCAAGTCCATACGCTTTAAA+TGG + chr5_3:18728228-18728247 None:intergenic 35.0%
GTTCTTCGGAGTTCAATTAT+TGG + chr5_3:18728259-18728278 None:intergenic 35.0%
GAGTATCAACTCTATTGTGA+AGG + chr5_3:18728341-18728360 None:intergenic 35.0%
TTTCACCTCAGTCATACTTA+TGG - chr5_3:18728642-18728661 Msa0803530:intron 35.0%
TTCACCTCAGTCATACTTAT+GGG - chr5_3:18728643-18728662 Msa0803530:intron 35.0%
TACTTAAACAATCAACGCCT+AGG - chr5_3:18728733-18728752 Msa0803530:intron 35.0%
!! TGTTTTGTTAAGTTCCTCGA+TGG + chr5_3:18728761-18728780 None:intergenic 35.0%
AAAAATAAGCGATCAACTGC+AGG + chr5_3:18729461-18729480 None:intergenic 35.0%
! GCTTTTCGATTTTGCTTTCT+TGG - chr5_3:18729513-18729532 Msa0803530:intron 35.0%
! TTCGATTTTGCTTTCTTGGA+TGG - chr5_3:18729517-18729536 Msa0803530:intron 35.0%
!! TGCTTTCTTGGATGGATTTT+TGG - chr5_3:18729525-18729544 Msa0803530:intron 35.0%
AGAAGAAGCAATGAAACAGA+TGG + chr5_3:18729742-18729761 None:intergenic 35.0%
TACGACTCTCATGTTTACTT+TGG + chr5_3:18729790-18729809 None:intergenic 35.0%
TGACTAAAAAGCTACCATGT+AGG - chr5_3:18729833-18729852 Msa0803530:intron 35.0%
AACTACACGGAAACAGAATT+TGG - chr5_3:18729932-18729951 Msa0803530:intron 35.0%
CACACTAAGGGTAAGTATAA+AGG + chr5_3:18730120-18730139 None:intergenic 35.0%
AAAAACGATGAATGGTCCAA+TGG + chr5_3:18730183-18730202 None:intergenic 35.0%
CACAAAAAAGATGGTCACAA+TGG + chr5_3:18730365-18730384 None:intergenic 35.0%
! GTTTGAAGGCACAAAAAAGA+TGG + chr5_3:18730374-18730393 None:intergenic 35.0%
GCAAAAATATGAGAACCTGA+CGG + chr5_3:18730490-18730509 None:intergenic 35.0%
AAATACATCCCAGAAAAGAG+GGG + chr5_3:18730595-18730614 None:intergenic 35.0%
CAAATACATCCCAGAAAAGA+GGG + chr5_3:18730596-18730615 None:intergenic 35.0%
ACAAATACATCCCAGAAAAG+AGG + chr5_3:18730597-18730616 None:intergenic 35.0%
CTGGGATGTATTTGTAAACA+AGG - chr5_3:18730602-18730621 Msa0803530:intron 35.0%
!! AGAATATTGGCTCTGATAGA+GGG - chr5_3:18730695-18730714 Msa0803530:intron 35.0%
GCATCTTATTCTTCTGTTTC+TGG - chr5_3:18730831-18730850 Msa0803530:intron 35.0%
!!! GTTTGTTTTGTTTAGGGACT+CGG - chr5_3:18730906-18730925 Msa0803530:intron 35.0%
! GTGGATTGTCAGTAATATTC+TGG + chr5_3:18730937-18730956 None:intergenic 35.0%
!! CATGTCGGTGTTGTAATTAT+TGG - chr5_3:18731113-18731132 Msa0803530:intron 35.0%
GATGTGCTGTGTATGTTATA+GGG - chr5_3:18731135-18731154 Msa0803530:intron 35.0%
GAATCTTTACACTTGCATCT+CGG - chr5_3:18731443-18731462 Msa0803530:intron 35.0%
ATTGGCAAATTATGCAGTCA+TGG - chr5_3:18731524-18731543 Msa0803530:intron 35.0%
TCTGATAAAAATGCGTATCG+TGG - chr5_3:18731684-18731703 Msa0803530:intron 35.0%
!! TAGCTTGGTGTAACTATAAG+TGG - chr5_3:18731943-18731962 Msa0803530:intron 35.0%
CTAGAACTAAGATATAGGAG+TGG + chr5_3:18731992-18732011 None:intergenic 35.0%
TCATCCCTAATTGAATCCTA+TGG + chr5_3:18732293-18732312 None:intergenic 35.0%
GGATTCAATTAGGGATGAAA+TGG - chr5_3:18732295-18732314 Msa0803530:intron 35.0%
CGGTAAAAAACCAACAAGAA+AGG - chr5_3:18732441-18732460 Msa0803530:intron 35.0%
CACTAAGTTTCCTTTCTTGT+TGG + chr5_3:18732454-18732473 None:intergenic 35.0%
CAAAGACGAGAATGTTACAT+CGG - chr5_3:18732477-18732496 Msa0803530:intron 35.0%
ACGACTATTGGAGAGAATAT+TGG - chr5_3:18732534-18732553 Msa0803530:intron 35.0%
TATTGGAGAGAATATTGGCA+TGG - chr5_3:18732539-18732558 Msa0803530:intron 35.0%
TATCTATGAAGTCAGTTGCT+TGG - chr5_3:18732587-18732606 Msa0803530:intron 35.0%
TTACGAACAATTGCATGCTT+TGG + chr5_3:18732798-18732817 None:intergenic 35.0%
GAACCTACTTTAAACGTTCA+TGG - chr5_3:18732834-18732853 Msa0803530:intron 35.0%
! TACCCATGAACGTTTAAAGT+AGG + chr5_3:18732840-18732859 None:intergenic 35.0%
CAGGTTATACAGATAGGAAA+GGG + chr5_3:18733024-18733043 None:intergenic 35.0%
! GTTTTCATAAGCTATCTTGG+AGG + chr5_3:18733138-18733157 None:intergenic 35.0%
!! GCTGTTTTCATAAGCTATCT+TGG + chr5_3:18733141-18733160 None:intergenic 35.0%
AAAATACTTTAGGCCCTGTT+TGG + chr5_3:18733268-18733287 None:intergenic 35.0%
AGTCAGAGGGAAAATACTTT+AGG + chr5_3:18733278-18733297 None:intergenic 35.0%
ATTTGATTGTAGGGACAAGT+TGG - chr5_3:18733327-18733346 Msa0803530:intron 35.0%
GGAAGAAAATAGTCTGTTGA+AGG + chr5_3:18733391-18733410 None:intergenic 35.0%
CCACATTATTAAGGCTTGAA+TGG + chr5_3:18733531-18733550 None:intergenic 35.0%
CCATTCAAGCCTTAATAATG+TGG - chr5_3:18733528-18733547 Msa0803530:five_prime_UTR 35.0%
!! GTTGGATGCAATTTTTCAGA+AGG - chr5_3:18733681-18733700 Msa0803530:intron 35.0%
TAATGAACAAGATGGCAACA+TGG + chr5_3:18733854-18733873 None:intergenic 35.0%
!! GAATCATGTTTTTCGATCCT+TGG + chr5_3:18733992-18734011 None:intergenic 35.0%
TGTTATAAATTCCTTGCGAC+TGG - chr5_3:18734580-18734599 Msa0803530:intron 35.0%
!! ACACAATCATCGAGTATTGA+TGG - chr5_3:18734613-18734632 Msa0803530:five_prime_UTR 35.0%
TCATTCATTCTGCATGACAA+TGG + chr5_3:18734681-18734700 None:intergenic 35.0%
TCATTCCATTCAAAATCTGC+AGG - chr5_3:18734811-18734830 Msa0803530:intron 35.0%
! ATCATCCTGCAGATTTTGAA+TGG + chr5_3:18734819-18734838 None:intergenic 35.0%
CTATCGCATTTATTATTCGC+AGG - chr5_3:18734878-18734897 Msa0803530:intron 35.0%
TAATCAGAACACAAGGGAAT+GGG + chr5_3:18734967-18734986 None:intergenic 35.0%
ATAATCAGAACACAAGGGAA+TGG + chr5_3:18734968-18734987 None:intergenic 35.0%
GTTGGATAATCAGAACACAA+GGG + chr5_3:18734973-18734992 None:intergenic 35.0%
AGTTGGATAATCAGAACACA+AGG + chr5_3:18734974-18734993 None:intergenic 35.0%
!! GTGTAGATTTTAGAGGTCAA+TGG - chr5_3:18735099-18735118 Msa0803530:intron 35.0%
AATAGCACAAATAGTCGATG+TGG - chr5_3:18735176-18735195 Msa0803530:intron 35.0%
ATAGCACAAATAGTCGATGT+GGG - chr5_3:18735177-18735196 Msa0803530:intron 35.0%
!! TAGCTCAAAGCTTTAAGGTA+TGG - chr5_3:18735274-18735293 Msa0803530:intron 35.0%
CACATCATTCATATTTGCTC+GGG - chr5_3:18735400-18735419 Msa0803530:intron 35.0%
!!! CGACACTTATTTTGAAACAG+AGG + chr5_3:18735620-18735639 None:intergenic 35.0%
AATAGGCAATAGTTAAAGGG+GGG - chr5_3:18735779-18735798 Msa0803530:intron 35.0%
AGGTTCTTTCACATAGATAG+AGG + chr5_3:18735850-18735869 None:intergenic 35.0%
ACCTTAAACGACCCTTAATT+TGG - chr5_3:18735866-18735885 Msa0803530:intron 35.0%
TCCAAATTAAGGGTCGTTTA+AGG + chr5_3:18735870-18735889 None:intergenic 35.0%
! TAAACGACCCTTAATTTGGA+AGG - chr5_3:18735870-18735889 Msa0803530:intron 35.0%
! AAACGACCCTTAATTTGGAA+GGG - chr5_3:18735871-18735890 Msa0803530:intron 35.0%
CATGTGTTAGACACAAGATA+TGG + chr5_3:18735931-18735950 None:intergenic 35.0%
ATCTTGTGTCTAACACATGT+AGG - chr5_3:18735932-18735951 Msa0803530:intron 35.0%
GTAAACTATCATTGGTCATG+TGG - chr5_3:18736009-18736028 Msa0803530:intron 35.0%
TTCTTCGTTTCCATTTGGAT+GGG + chr5_3:18736151-18736170 None:intergenic 35.0%
ATTCTTCGTTTCCATTTGGA+TGG + chr5_3:18736152-18736171 None:intergenic 35.0%
! ACGAAGAATAATGGAAGCAA+TGG - chr5_3:18736163-18736182 Msa0803530:intron 35.0%
CAATGGCACATGATTTATCA+TGG - chr5_3:18736180-18736199 Msa0803530:intron 35.0%
GTGGATGGAATTCCCAAAAT+AGG + chr5_3:18727061-18727080 None:intergenic 40.0%
!!! GGTTTTGGAAGAAAAGTGGA+TGG + chr5_3:18727076-18727095 None:intergenic 40.0%
GAAAGAGCAGGAAGTGAAAT+GGG + chr5_3:18727097-18727116 None:intergenic 40.0%
AGAAAGAGCAGGAAGTGAAA+TGG + chr5_3:18727098-18727117 None:intergenic 40.0%
! TTCCTGCTCTTTCTTGTTTC+AGG - chr5_3:18727104-18727123 Msa0803530:three_prime_UTR 40.0%
TACCTGAAACAAGAAAGAGC+AGG + chr5_3:18727109-18727128 None:intergenic 40.0%
GCTTCATACACAAGCCTATT+TGG - chr5_3:18727733-18727752 Msa0803530:intron 40.0%
TAAAAATGAGGACATGTCCC+AGG - chr5_3:18727797-18727816 Msa0803530:intron 40.0%
AACAACAACCAAAGTGGAGT+CGG + chr5_3:18727901-18727920 None:intergenic 40.0%
TAGTTAAGGTTGAATCGACC+AGG - chr5_3:18727939-18727958 Msa0803530:intron 40.0%
ATTCGGCCAGAATGTAAGTA+TGG + chr5_3:18727999-18728018 None:intergenic 40.0%
ACTTACATTCTGGCCGAATT+TGG - chr5_3:18728000-18728019 Msa0803530:intron 40.0%
CTTACATTCTGGCCGAATTT+GGG - chr5_3:18728001-18728020 Msa0803530:intron 40.0%
! GGTTTCTAGAGAAAAGGGTT+TGG + chr5_3:18728031-18728050 None:intergenic 40.0%
AAAACTCGGTATCCAGTACA+AGG - chr5_3:18728155-18728174 Msa0803530:intron 40.0%
ATTGTACCCCTCAGATTAGT+CGG + chr5_3:18728182-18728201 None:intergenic 40.0%
TGTGAAGGGAAAATCCTTGA+AGG + chr5_3:18728326-18728345 None:intergenic 40.0%
TTTCACATTCTGGCCATCAT+CGG + chr5_3:18728574-18728593 None:intergenic 40.0%
GAAATTGGAAGCAGAAAAGC+AGG - chr5_3:18728816-18728835 Msa0803530:intron 40.0%
GACGGAAACATATGGACAAT+TGG + chr5_3:18729017-18729036 None:intergenic 40.0%
ATATGTTTCCGTCAGCAGAT+CGG - chr5_3:18729024-18729043 Msa0803530:intron 40.0%
GTCTATTCGAAGCAGCAATT+CGG + chr5_3:18729264-18729283 None:intergenic 40.0%
TCGAATAGACTCAATGGTTC+TGG - chr5_3:18729274-18729293 Msa0803530:intron 40.0%
CGAATAGACTCAATGGTTCT+GGG - chr5_3:18729275-18729294 Msa0803530:intron 40.0%
! GGCATCTGACTTTAGAAGTT+TGG - chr5_3:18729319-18729338 Msa0803530:intron 40.0%
GTTACACCATAAAGTGAGTG+TGG - chr5_3:18729343-18729362 Msa0803530:intron 40.0%
TTGCACAGAAATGACACCAT+TGG - chr5_3:18729609-18729628 Msa0803530:intron 40.0%
TCTGTAGCATCATATGTCAC+CGG - chr5_3:18729643-18729662 Msa0803530:intron 40.0%
TCTAAGCATGCATACCTACA+TGG + chr5_3:18729850-18729869 None:intergenic 40.0%
TTAGACCTAGATGAAGTGCA+AGG - chr5_3:18729865-18729884 Msa0803530:intron 40.0%
AGGTTTGCGTGAAGTTAATG+TGG - chr5_3:18729885-18729904 Msa0803530:intron 40.0%
TTTGCGTGAAGTTAATGTGG+AGG - chr5_3:18729888-18729907 Msa0803530:intron 40.0%
ACGGAAACAGAATTTGGACT+GGG - chr5_3:18729938-18729957 Msa0803530:intron 40.0%
!! GAATTTGGACTGGGTTAGTT+TGG - chr5_3:18729947-18729966 Msa0803530:intron 40.0%
TGTTAAATAACATGGACCGG+TGG - chr5_3:18730015-18730034 Msa0803530:CDS 40.0%
ACAACACTGTCACACACTAA+GGG + chr5_3:18730132-18730151 None:intergenic 40.0%
AACAACACTGTCACACACTA+AGG + chr5_3:18730133-18730152 None:intergenic 40.0%
!! GTGTGTGACAGTGTTGTTTA+TGG - chr5_3:18730135-18730154 Msa0803530:intron 40.0%
!! GACAGTGTTGTTTATGGCAT+TGG - chr5_3:18730141-18730160 Msa0803530:intron 40.0%
GGTAACCATATATCATCTCG+CGG + chr5_3:18730209-18730228 None:intergenic 40.0%
CGAGATGATATATGGTTACC+CGG - chr5_3:18730209-18730228 Msa0803530:intron 40.0%
! GTTACCCGGATGATTTTGAA+AGG - chr5_3:18730223-18730242 Msa0803530:intron 40.0%
ACCGCACTCAAGTATTACAT+CGG - chr5_3:18730301-18730320 Msa0803530:intron 40.0%
ACCGATGTAATACTTGAGTG+CGG + chr5_3:18730305-18730324 None:intergenic 40.0%
CTATATAATCCAGTGAGGCA+CGG + chr5_3:18730512-18730531 None:intergenic 40.0%
!! GAGAATATTGGCTCTGATAG+AGG - chr5_3:18730694-18730713 Msa0803530:intron 40.0%
! TAACTTGTGAAGTGAAGTCG+TGG + chr5_3:18730956-18730975 None:intergenic 40.0%
GGATGTGCTGTGTATGTTAT+AGG - chr5_3:18731134-18731153 Msa0803530:intron 40.0%
TACCGAGCAACCAGATAAAT+TGG - chr5_3:18731158-18731177 Msa0803530:intron 40.0%
CCACATAAGGCCAATTTATC+TGG + chr5_3:18731171-18731190 None:intergenic 40.0%
!! CCAGATAAATTGGCCTTATG+TGG - chr5_3:18731168-18731187 Msa0803530:intron 40.0%
TGAAGGATCAAGTCCACATA+AGG + chr5_3:18731184-18731203 None:intergenic 40.0%
GTAGATAAAGAAAGCCGCAA+TGG + chr5_3:18731348-18731367 None:intergenic 40.0%
TACTGATAAGGGGAAAAACC+AGG + chr5_3:18731370-18731389 None:intergenic 40.0%
TGAGGTGAAAAACTAGTCCA+AGG + chr5_3:18731402-18731421 None:intergenic 40.0%
ATCCTTCTTCATTTCGAGAC+TGG - chr5_3:18731552-18731571 Msa0803530:intron 40.0%
TCCTTCTTCATTTCGAGACT+GGG - chr5_3:18731553-18731572 Msa0803530:intron 40.0%
TAACGAACCTATCCAAGAGA+TGG + chr5_3:18731712-18731731 None:intergenic 40.0%
GTAACTATAAGTGGCCATCA+AGG - chr5_3:18731952-18731971 Msa0803530:intron 40.0%
TATAGATGTGAAGACAAGCC+TGG - chr5_3:18732114-18732133 Msa0803530:intron 40.0%
ATAGATGTGAAGACAAGCCT+GGG - chr5_3:18732115-18732134 Msa0803530:intron 40.0%
GGATGAAATGGAGAATGCTT+CGG - chr5_3:18732307-18732326 Msa0803530:intron 40.0%
AAATGGAGAATGCTTCGGAT+CGG - chr5_3:18732312-18732331 Msa0803530:intron 40.0%
! TTTCAGGTCTCATAACAGTG+TGG + chr5_3:18732397-18732416 None:intergenic 40.0%
CGAGAATGTTACATCGGATT+CGG - chr5_3:18732483-18732502 Msa0803530:intron 40.0%
! GAACAATTGCATGCTTTGGA+TGG + chr5_3:18732794-18732813 None:intergenic 40.0%
CCAGGTTATACAGATAGGAA+AGG + chr5_3:18733025-18733044 None:intergenic 40.0%
CCTTTCCTATCTGTATAACC+TGG - chr5_3:18733022-18733041 Msa0803530:intron 40.0%
CTCAAATCCATAAGGAGCAA+TGG + chr5_3:18733353-18733372 None:intergenic 40.0%
CAGCAATGCAACTTTGCAAA+CGG + chr5_3:18733449-18733468 None:intergenic 40.0%
TTAAGGCTTGAATGGCACAA+AGG + chr5_3:18733523-18733542 None:intergenic 40.0%
AAGGGTGGACCACATTATTA+AGG + chr5_3:18733540-18733559 None:intergenic 40.0%
!! AAGAAGCTGTTCTAAAAGGG+TGG + chr5_3:18733555-18733574 None:intergenic 40.0%
TGCAATTTAATTAGGGGAGG+AGG - chr5_3:18734070-18734089 Msa0803530:five_prime_UTR 40.0%
CAAAGACACCAAAGACAGTT+TGG + chr5_3:18734248-18734267 None:intergenic 40.0%
!! CAAACTGTCTTTGGTGTCTT+TGG - chr5_3:18734246-18734265 Msa0803530:intron 40.0%
CGCTCCGCAGTTTATATTTA+TGG - chr5_3:18734459-18734478 Msa0803530:intron 40.0%
! ATTCAAGTCTGGTCTTTCAC+TGG + chr5_3:18734488-18734507 None:intergenic 40.0%
TGAAAGACCAGACTTGAATC+AGG - chr5_3:18734489-18734508 Msa0803530:intron 40.0%
GGCACTAGAATCACTTCATA+TGG - chr5_3:18734510-18734529 Msa0803530:intron 40.0%
!! TCATCGAGTATTGATGGCTT+TGG - chr5_3:18734619-18734638 Msa0803530:five_prime_UTR 40.0%
AATCAGAACACAAGGGAATG+GGG + chr5_3:18734966-18734985 None:intergenic 40.0%
! TTTAAGCGGAGATTTTCACG+TGG - chr5_3:18735073-18735092 Msa0803530:intron 40.0%
CAAATAGTCGATGTGGGATA+TGG - chr5_3:18735183-18735202 Msa0803530:intron 40.0%
ACTCTGATTCTCACACAAAC+AGG - chr5_3:18735317-18735336 Msa0803530:intron 40.0%
CTTCATAAACCATGACCAAG+AGG - chr5_3:18735442-18735461 Msa0803530:intron 40.0%
TTGAGTACTTAGTTGCCTCT+TGG + chr5_3:18735460-18735479 None:intergenic 40.0%
! ACCTTTGGAAACATGTCACT+TGG - chr5_3:18735494-18735513 Msa0803530:intron 40.0%
TGTAGGTGTCTAACATGTGT+TGG - chr5_3:18735949-18735968 Msa0803530:intron 40.0%
TGACTTTGATATGGGTGTAG+AGG - chr5_3:18736120-18736139 Msa0803530:intron 40.0%
GCACATGATTTATCATGGGA+TGG - chr5_3:18736185-18736204 Msa0803530:intron 40.0%
TGAATGCTACGAAGTTCATG+TGG - chr5_3:18736208-18736227 Msa0803530:intron 40.0%
TTACTCAAGAGAAGGAAAGC+CGG - chr5_3:18736413-18736432 Msa0803530:five_prime_UTR 40.0%
!!! AAAGTTGCGGATGCTTTTTC+CGG + chr5_3:18736435-18736454 None:intergenic 40.0%
!! GCAGGAAGTGAAATGGGTTT+TGG + chr5_3:18727091-18727110 None:intergenic 45.0%
!! AATGCTTAAAGAGTGCCCCA+GGG + chr5_3:18727357-18727376 None:intergenic 45.0%
! AGGAATAATGGAGATGCCAG+TGG - chr5_3:18727661-18727680 Msa0803530:intron 45.0%
CCTTTGTTCATGTAAGCCAC+TGG + chr5_3:18727680-18727699 None:intergenic 45.0%
CCAGTGGCTTACATGAACAA+AGG - chr5_3:18727677-18727696 Msa0803530:intron 45.0%
GAAACAAAGGCAGCATACCT+GGG + chr5_3:18727817-18727836 None:intergenic 45.0%
AGAAACAAAGGCAGCATACC+TGG + chr5_3:18727818-18727837 None:intergenic 45.0%
!! GGGTTTGGTGATCCCAAATT+CGG + chr5_3:18728016-18728035 None:intergenic 45.0%
! CCTCCGGTTTCTAGAGAAAA+GGG + chr5_3:18728036-18728055 None:intergenic 45.0%
!! CCTTTTCTCTAGAAACCGGA+GGG - chr5_3:18728034-18728053 Msa0803530:intron 45.0%
! AGATTAGTCGGTCCTTGTAC+TGG + chr5_3:18728170-18728189 None:intergenic 45.0%
TACAAGGACCGACTAATCTG+AGG - chr5_3:18728171-18728190 Msa0803530:intron 45.0%
ACAAGGACCGACTAATCTGA+GGG - chr5_3:18728172-18728191 Msa0803530:intron 45.0%
TGAGCCCATAAGTATGACTG+AGG + chr5_3:18728650-18728669 None:intergenic 45.0%
!! CACGAGTTGATCACGTAGTT+CGG - chr5_3:18728991-18729010 Msa0803530:intron 45.0%
GATCTGCTGACGGAAACATA+TGG + chr5_3:18729025-18729044 None:intergenic 45.0%
GCTGCTTCGAATAGACTCAA+TGG - chr5_3:18729268-18729287 Msa0803530:intron 45.0%
TAAAGTCAGATGCCTCTGCA+GGG + chr5_3:18729313-18729332 None:intergenic 45.0%
CATCAGCCACACTCACTTTA+TGG + chr5_3:18729352-18729371 None:intergenic 45.0%
ATAAGCGATCAACTGCAGGA+AGG + chr5_3:18729457-18729476 None:intergenic 45.0%
! ATGACACCATTGGTCTCTAG+AGG - chr5_3:18729619-18729638 Msa0803530:intron 45.0%
! ACAGATCCTCTAGAGACCAA+TGG + chr5_3:18729628-18729647 None:intergenic 45.0%
TTGAAGTGCACGAGATATGC+CGG + chr5_3:18729665-18729684 None:intergenic 45.0%
TCTCGTGCACTTCAAAGAAG+AGG - chr5_3:18729670-18729689 Msa0803530:CDS 45.0%
TGGGCAATATAACCTCTGCA+AGG + chr5_3:18729699-18729718 None:intergenic 45.0%
GCAAACCTTGCACTTCATCT+AGG + chr5_3:18729873-18729892 None:intergenic 45.0%
CACGGAAACAGAATTTGGAC+TGG - chr5_3:18729937-18729956 Msa0803530:intron 45.0%
! AGTCACTTTGATCGAGCCAT+TGG - chr5_3:18730164-18730183 Msa0803530:intron 45.0%
TTCAGCCGCGAGATGATATA+TGG - chr5_3:18730201-18730220 Msa0803530:intron 45.0%
TGTTGAAATCTTGTGCCGTC+AGG - chr5_3:18730472-18730491 Msa0803530:intron 45.0%
!! ATATTTTTGCCGTGCCTCAC+TGG - chr5_3:18730500-18730519 Msa0803530:intron 45.0%
! CATTGTTGCCCCTCTTTTCT+GGG - chr5_3:18730584-18730603 Msa0803530:intron 45.0%
!!! TGTTTTGTTTAGGGACTCGG+AGG - chr5_3:18730909-18730928 Msa0803530:intron 45.0%
GGCCAATTTATCTGGTTGCT+CGG + chr5_3:18731163-18731182 None:intergenic 45.0%
TCAGGACGATGAAGACTTGA+AGG + chr5_3:18731201-18731220 None:intergenic 45.0%
TGCGGCTTTCTTTATCTACC+TGG - chr5_3:18731349-18731368 Msa0803530:intron 45.0%
CCTTCTTCATTTCGAGACTG+GGG - chr5_3:18731554-18731573 Msa0803530:intron 45.0%
CTTCTTCATTTCGAGACTGG+GGG - chr5_3:18731555-18731574 Msa0803530:intron 45.0%
AAGCACTCAAAGCTGACACT+TGG - chr5_3:18731756-18731775 Msa0803530:intron 45.0%
!!! TTTTGTGTCGGTGTCGTGTT+TGG + chr5_3:18731813-18731832 None:intergenic 45.0%
! ACGCCTTCGATCTAAAGTGT+CGG - chr5_3:18731913-18731932 Msa0803530:intron 45.0%
! GTACCGACACTTTAGATCGA+AGG + chr5_3:18731919-18731938 None:intergenic 45.0%
!! AGTGTCGGTACTACATAGCT+TGG - chr5_3:18731928-18731947 Msa0803530:intron 45.0%
! AGCTCGAAGTTGATCCTTGA+TGG + chr5_3:18731969-18731988 None:intergenic 45.0%
AGCCTGGGAAACACATAGAT+TGG - chr5_3:18732130-18732149 Msa0803530:intron 45.0%
GCCTGGGAAACACATAGATT+GGG - chr5_3:18732131-18732150 Msa0803530:intron 45.0%
GAACATGGTGATATAGAGGG+AGG - chr5_3:18732261-18732280 Msa0803530:five_prime_UTR 45.0%
TAGAGGGAGGTTTCAACCAT+AGG - chr5_3:18732274-18732293 Msa0803530:five_prime_UTR 45.0%
TTGAGTCACATCCGAACAGT+AGG + chr5_3:18732356-18732375 None:intergenic 45.0%
AGTCCGCCATCAAATTTGCA+GGG - chr5_3:18732727-18732746 Msa0803530:intron 45.0%
TACTCCCCCTGCAAATTTGA+TGG + chr5_3:18732736-18732755 None:intergenic 45.0%
AAGCTATCTTGGAGGGCTTA+TGG + chr5_3:18733130-18733149 None:intergenic 45.0%
AAGTTGGCCATTGCTCCTTA+TGG - chr5_3:18733343-18733362 Msa0803530:intron 45.0%
! GTTTTGTAGAGATGGCAACC+TGG + chr5_3:18733767-18733786 None:intergenic 45.0%
CACACTGCTAGTGCTATGTT+TGG + chr5_3:18733896-18733915 None:intergenic 45.0%
!! ATGTTTTTCGATCCTTGGGC+CGG + chr5_3:18733987-18734006 None:intergenic 45.0%
! ATTTAGGCTCTGGTCCGAAA+GGG + chr5_3:18734204-18734223 None:intergenic 45.0%
TCTAGTGCCTGATTCAAGTC+TGG + chr5_3:18734499-18734518 None:intergenic 45.0%
CTTACTGGGGTTTCATCAGT+AGG + chr5_3:18734938-18734957 None:intergenic 45.0%
! GTGGCACGTGTAGATTTTAG+AGG - chr5_3:18735092-18735111 Msa0803530:intron 45.0%
GAATCAGAGTCAACTGCTAC+TGG + chr5_3:18735307-18735326 None:intergenic 45.0%
! CTCGGGTGACACCTTTTAAT+AGG - chr5_3:18735417-18735436 Msa0803530:intron 45.0%
ACTTAGTTGCCTCTTGGTCA+TGG + chr5_3:18735454-18735473 None:intergenic 45.0%
GCCAAGTGACATGTTTCCAA+AGG + chr5_3:18735498-18735517 None:intergenic 45.0%
CTGCCTCCCTTCCAAATTAA+GGG + chr5_3:18735880-18735899 None:intergenic 45.0%
ACTGCCTCCCTTCCAAATTA+AGG + chr5_3:18735881-18735900 None:intergenic 45.0%
AGAGGAGTAACCCATCCAAA+TGG - chr5_3:18736138-18736157 Msa0803530:intron 45.0%
!!! TTATCATAAATATATTTTAA+TGG - chr5_3:18727559-18727578 Msa0803530:intron 5.0%
!!! TTATTTACTTTTTTAAAATT+CGG - chr5_3:18733958-18733977 Msa0803530:intron 5.0%
! GTCTTGTTAACGAGTGCCCT+GGG - chr5_3:18727338-18727357 Msa0803530:intron 50.0%
TCTTGTTAACGAGTGCCCTG+GGG - chr5_3:18727339-18727358 Msa0803530:intron 50.0%
!! GAATGCTTAAAGAGTGCCCC+AGG + chr5_3:18727358-18727377 None:intergenic 50.0%
!! TAGGTGCTTAAAGAGTGCCC+CGG - chr5_3:18727466-18727485 Msa0803530:intron 50.0%
AAATGTTAACGAGTGCCCCG+GGG + chr5_3:18727486-18727505 None:intergenic 50.0%
GAAATGTTAACGAGTGCCCC+GGG + chr5_3:18727487-18727506 None:intergenic 50.0%
GGAAATGTTAACGAGTGCCC+CGG + chr5_3:18727488-18727507 None:intergenic 50.0%
CAGTTCGAACTGAGTACTCC+TGG + chr5_3:18727960-18727979 None:intergenic 50.0%
!! CCCTTTTCTCTAGAAACCGG+AGG - chr5_3:18728033-18728052 Msa0803530:intron 50.0%
! CCCTCCGGTTTCTAGAGAAA+AGG + chr5_3:18728037-18728056 None:intergenic 50.0%
CAAGGACCGACTAATCTGAG+GGG - chr5_3:18728173-18728192 Msa0803530:intron 50.0%
! GGGGCTCCATTTAAAGCGTA+TGG - chr5_3:18728219-18728238 Msa0803530:intron 50.0%
GGGAGAGAATCTCTCCTTCA+AGG - chr5_3:18728309-18728328 Msa0803530:intron 50.0%
TAAGTTCCTCGATGGCACCT+AGG + chr5_3:18728753-18728772 None:intergenic 50.0%
!! CAGGAGAGTGCTGGTAAAAG+TGG - chr5_3:18728835-18728854 Msa0803530:intron 50.0%
CAACGTAATTAGCCCTGCAG+AGG - chr5_3:18729298-18729317 Msa0803530:intron 50.0%
CTAAAGTCAGATGCCTCTGC+AGG + chr5_3:18729314-18729333 None:intergenic 50.0%
AAGAAGAGGTCACCTTGCAG+AGG - chr5_3:18729684-18729703 Msa0803530:CDS 50.0%
CGCGGCTGAAAAACGATGAA+TGG + chr5_3:18730191-18730210 None:intergenic 50.0%
CCAGAAAAGAGGGGCAACAA+TGG + chr5_3:18730586-18730605 None:intergenic 50.0%
! CCATTGTTGCCCCTCTTTTC+TGG - chr5_3:18730583-18730602 Msa0803530:intron 50.0%
GCTCTGATAGAGGGTAATGC+AGG - chr5_3:18730704-18730723 Msa0803530:intron 50.0%
GTGTTGTCTTGCAGACGATC+AGG + chr5_3:18731219-18731238 None:intergenic 50.0%
ACACTTGCATCTCGGAGCAA+AGG - chr5_3:18731451-18731470 Msa0803530:intron 50.0%
CCCCAGTCTCGAAATGAAGA+AGG + chr5_3:18731557-18731576 None:intergenic 50.0%
TGTCAGCGTTGTGTCAGTCT+CGG - chr5_3:18731881-18731900 Msa0803530:intron 50.0%
GCCCAATCTATGTGTTTCCC+AGG + chr5_3:18732135-18732154 None:intergenic 50.0%
GTTCGGATGTGACTCAAGCA+TGG - chr5_3:18732359-18732378 Msa0803530:intron 50.0%
GAGTCCGCCATCAAATTTGC+AGG - chr5_3:18732726-18732745 Msa0803530:intron 50.0%
GTCCGCCATCAAATTTGCAG+GGG - chr5_3:18732728-18732747 Msa0803530:intron 50.0%
TCCGCCATCAAATTTGCAGG+GGG - chr5_3:18732729-18732748 Msa0803530:intron 50.0%
TCCCCCTGCAAATTTGATGG+CGG + chr5_3:18732733-18732752 None:intergenic 50.0%
GCAAAGTTGCATTGCTGCAG+CGG - chr5_3:18733452-18733471 Msa0803530:intron 50.0%
AGGCTTGAATGGCACAAAGG+TGG + chr5_3:18733520-18733539 None:intergenic 50.0%
! TGCTAAGAAGCACGATGTCC+AGG - chr5_3:18733746-18733765 Msa0803530:five_prime_UTR 50.0%
AAAATTCGGTATCCGGCCCA+AGG - chr5_3:18733972-18733991 Msa0803530:intron 50.0%
GATTTGAACCCACGCCCTTT+CGG - chr5_3:18734187-18734206 Msa0803530:five_prime_UTR 50.0%
! GATTTAGGCTCTGGTCCGAA+AGG + chr5_3:18734205-18734224 None:intergenic 50.0%
TTCGGACCAGAGCCTAAATC+TGG - chr5_3:18734205-18734224 Msa0803530:intron 50.0%
! TGGTCTAAGGCGCCAGATTT+AGG + chr5_3:18734220-18734239 None:intergenic 50.0%
! GAATGGGGATGGACTTACTG+GGG + chr5_3:18734951-18734970 None:intergenic 50.0%
! GGAATGGGGATGGACTTACT+GGG + chr5_3:18734952-18734971 None:intergenic 50.0%
AGAACACAAGGGAATGGGGA+TGG + chr5_3:18734962-18734981 None:intergenic 50.0%
! CGACCCTTAATTTGGAAGGG+AGG - chr5_3:18735874-18735893 Msa0803530:intron 50.0%
!! GGTCTTGTTAACGAGTGCCC+TGG - chr5_3:18727337-18727356 Msa0803530:intron 55.0%
!! AGGTGCTTAAAGAGTGCCCC+GGG - chr5_3:18727467-18727486 Msa0803530:intron 55.0%
CCAAAGTGGAGTCGGCTACA+AGG + chr5_3:18727893-18727912 None:intergenic 55.0%
! CCTTGTAGCCGACTCCACTT+TGG - chr5_3:18727890-18727909 Msa0803530:intron 55.0%
AATCCTACCGTCCACCTGCA+GGG - chr5_3:18728199-18728218 Msa0803530:intron 55.0%
TTAAATGGAGCCCCTGCAGG+TGG + chr5_3:18728213-18728232 None:intergenic 55.0%
! GCTTTAAATGGAGCCCCTGC+AGG + chr5_3:18728216-18728235 None:intergenic 55.0%
! GCAGAAAAGCAGGAGAGTGC+TGG - chr5_3:18728826-18728845 Msa0803530:intron 55.0%
CACAGTAGCCGATCTGCTGA+CGG + chr5_3:18729035-18729054 None:intergenic 55.0%
TTTCGAGACTGGGGGAGTAG+AGG - chr5_3:18731563-18731582 Msa0803530:intron 55.0%
TTCGAGACTGGGGGAGTAGA+GGG - chr5_3:18731564-18731583 Msa0803530:intron 55.0%
CGTATCGTGGCACCATCTCT+TGG - chr5_3:18731697-18731716 Msa0803530:intron 55.0%
CGTGGCACCATCTCTTGGAT+AGG - chr5_3:18731702-18731721 Msa0803530:intron 55.0%
CGGATGTGACTCAAGCATGG+AGG - chr5_3:18732362-18732381 Msa0803530:intron 55.0%
! AAGGCGCCAGATTTAGGCTC+TGG + chr5_3:18734214-18734233 None:intergenic 55.0%
ATCTGGCGCCTTAGACCACT+CGG - chr5_3:18734222-18734241 Msa0803530:intron 55.0%
CAGTTTGGCCGAGTGGTCTA+AGG + chr5_3:18734233-18734252 None:intergenic 55.0%
CCAAAGACAGTTTGGCCGAG+TGG + chr5_3:18734240-18734259 None:intergenic 55.0%
CCACTCGGCCAAACTGTCTT+TGG - chr5_3:18734237-18734256 Msa0803530:intron 55.0%
! GGGAATGGGGATGGACTTAC+TGG + chr5_3:18734953-18734972 None:intergenic 55.0%
!! GGTGCTTAAAGAGTGCCCCG+GGG - chr5_3:18727468-18727487 Msa0803530:intron 60.0%
CAATCCTACCGTCCACCTGC+AGG - chr5_3:18728198-18728217 Msa0803530:intron 60.0%
ATCCTACCGTCCACCTGCAG+GGG - chr5_3:18728200-18728219 Msa0803530:intron 60.0%
! TCAACGCCTAGGTGCCATCG+AGG - chr5_3:18728744-18728763 Msa0803530:intron 60.0%
GACTGGGGGAGTAGAGGGTT+TGG - chr5_3:18731569-18731588 Msa0803530:intron 60.0%
GTTGCATTGCTGCAGCGGCT+CGG - chr5_3:18733457-18733476 Msa0803530:intron 60.0%
TTGCATTGCTGCAGCGGCTC+GGG - chr5_3:18733458-18733477 Msa0803530:intron 60.0%
TGCACGTGCAACCAGTCGCA+AGG + chr5_3:18734594-18734613 None:intergenic 60.0%
ATGGAGCCCCTGCAGGTGGA+CGG + chr5_3:18728209-18728228 None:intergenic 65.0%
! GCTCTGGTCCGAAAGGGCGT+GGG + chr5_3:18734198-18734217 None:intergenic 65.0%
AGCCCCTGCAGGTGGACGGT+AGG + chr5_3:18728205-18728224 None:intergenic 70.0%
! GGCTCTGGTCCGAAAGGGCG+TGG + chr5_3:18734199-18734218 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 18726998 18736461 18726998 ID=Msa0803530;Name=Msa0803530
chr5_3 mRNA 18726998 18736461 18726998 ID=Msa0803530-mRNA-1;Parent=Msa0803530;Name=Msa0803530-mRNA-1;_AED=0.16;_eAED=0.16;_QI=1333|0.81|0.88|1|0.87|0.94|17|202|149
chr5_3 exon 18726998 18727319 18726998 ID=Msa0803530-mRNA-1:exon:7692;Parent=Msa0803530-mRNA-1
chr5_3 exon 18728507 18728626 18728507 ID=Msa0803530-mRNA-1:exon:7691;Parent=Msa0803530-mRNA-1
chr5_3 exon 18729668 18729778 18729668 ID=Msa0803530-mRNA-1:exon:7690;Parent=Msa0803530-mRNA-1
chr5_3 exon 18729952 18730046 18729952 ID=Msa0803530-mRNA-1:exon:7689;Parent=Msa0803530-mRNA-1
chr5_3 exon 18730603 18730711 18730603 ID=Msa0803530-mRNA-1:exon:7688;Parent=Msa0803530-mRNA-1
chr5_3 exon 18732192 18732303 18732192 ID=Msa0803530-mRNA-1:exon:7687;Parent=Msa0803530-mRNA-1
chr5_3 exon 18732488 18732538 18732488 ID=Msa0803530-mRNA-1:exon:7686;Parent=Msa0803530-mRNA-1
chr5_3 exon 18732836 18732965 18732836 ID=Msa0803530-mRNA-1:exon:7685;Parent=Msa0803530-mRNA-1
chr5_3 exon 18733215 18733313 18733215 ID=Msa0803530-mRNA-1:exon:7684;Parent=Msa0803530-mRNA-1
chr5_3 exon 18733500 18733604 18733500 ID=Msa0803530-mRNA-1:exon:7683;Parent=Msa0803530-mRNA-1
chr5_3 exon 18733740 18733874 18733740 ID=Msa0803530-mRNA-1:exon:7682;Parent=Msa0803530-mRNA-1
chr5_3 exon 18734012 18734216 18734012 ID=Msa0803530-mRNA-1:exon:7681;Parent=Msa0803530-mRNA-1
chr5_3 exon 18734612 18734734 18734612 ID=Msa0803530-mRNA-1:exon:7680;Parent=Msa0803530-mRNA-1
chr5_3 exon 18734826 18734895 18734826 ID=Msa0803530-mRNA-1:exon:7679;Parent=Msa0803530-mRNA-1
chr5_3 exon 18735641 18735674 18735641 ID=Msa0803530-mRNA-1:exon:7678;Parent=Msa0803530-mRNA-1
chr5_3 exon 18735761 18735796 18735761 ID=Msa0803530-mRNA-1:exon:7677;Parent=Msa0803530-mRNA-1
chr5_3 exon 18736334 18736461 18736334 ID=Msa0803530-mRNA-1:exon:7676;Parent=Msa0803530-mRNA-1
chr5_3 five_prime_UTR 18736334 18736461 18736334 ID=Msa0803530-mRNA-1:five_prime_utr;Parent=Msa0803530-mRNA-1
chr5_3 five_prime_UTR 18735761 18735796 18735761 ID=Msa0803530-mRNA-1:five_prime_utr;Parent=Msa0803530-mRNA-1
chr5_3 five_prime_UTR 18735641 18735674 18735641 ID=Msa0803530-mRNA-1:five_prime_utr;Parent=Msa0803530-mRNA-1
chr5_3 five_prime_UTR 18734826 18734895 18734826 ID=Msa0803530-mRNA-1:five_prime_utr;Parent=Msa0803530-mRNA-1
chr5_3 five_prime_UTR 18734612 18734734 18734612 ID=Msa0803530-mRNA-1:five_prime_utr;Parent=Msa0803530-mRNA-1
chr5_3 five_prime_UTR 18734012 18734216 18734012 ID=Msa0803530-mRNA-1:five_prime_utr;Parent=Msa0803530-mRNA-1
chr5_3 five_prime_UTR 18733740 18733874 18733740 ID=Msa0803530-mRNA-1:five_prime_utr;Parent=Msa0803530-mRNA-1
chr5_3 five_prime_UTR 18733500 18733604 18733500 ID=Msa0803530-mRNA-1:five_prime_utr;Parent=Msa0803530-mRNA-1
chr5_3 five_prime_UTR 18733215 18733313 18733215 ID=Msa0803530-mRNA-1:five_prime_utr;Parent=Msa0803530-mRNA-1
chr5_3 five_prime_UTR 18732836 18732965 18732836 ID=Msa0803530-mRNA-1:five_prime_utr;Parent=Msa0803530-mRNA-1
chr5_3 five_prime_UTR 18732488 18732538 18732488 ID=Msa0803530-mRNA-1:five_prime_utr;Parent=Msa0803530-mRNA-1
chr5_3 five_prime_UTR 18732192 18732303 18732192 ID=Msa0803530-mRNA-1:five_prime_utr;Parent=Msa0803530-mRNA-1
chr5_3 five_prime_UTR 18730607 18730711 18730607 ID=Msa0803530-mRNA-1:five_prime_utr;Parent=Msa0803530-mRNA-1
chr5_3 CDS 18730603 18730606 18730603 ID=Msa0803530-mRNA-1:cds;Parent=Msa0803530-mRNA-1
chr5_3 CDS 18729952 18730046 18729952 ID=Msa0803530-mRNA-1:cds;Parent=Msa0803530-mRNA-1
chr5_3 CDS 18729668 18729778 18729668 ID=Msa0803530-mRNA-1:cds;Parent=Msa0803530-mRNA-1
chr5_3 CDS 18728507 18728626 18728507 ID=Msa0803530-mRNA-1:cds;Parent=Msa0803530-mRNA-1
chr5_3 CDS 18727200 18727319 18727200 ID=Msa0803530-mRNA-1:cds;Parent=Msa0803530-mRNA-1
chr5_3 three_prime_UTR 18726998 18727199 18726998 ID=Msa0803530-mRNA-1:three_prime_utr;Parent=Msa0803530-mRNA-1
Gene Sequence

>Msa0803530

ATGGAAAATTTTAATGCTGAAAATATGAATGGAAAAGCCGTTTGCAAAGTTGCATTGCTGCAGCGGCTCGGGTTATCTGAACATTCTTCTACTATTCTTGTTGGATGCAATTTTTCAGAAGGAGCTGATATTGATGAGCAAAAGATGAAGGATATTGTTTTGAATGCTAAGAAGCACGATGTCCAGGTTGCCATCTCTACAAAACTTACAGATGATGATGATAATATTAAATTTGTGCGTTCATATGATGAAGCTCTATCGCATTTATTATTCGCAGGATCAGACATTATATTATGTCGATCTTTTCATGATCCTACTGATGAAACCCCAAGGAGTAACCCATCCAAATGGAAACGAAGAATAATGGAAGCAATGGCACATGATTTATCATGGGATGGTGAATGCTACGAAGTTCATGTGGCAGCTTACTCAGCTATAAAGAATATGTGA
Protein sequence

>Msa0803530

MENFNAENMNGKAVCKVALLQRLGLSEHSSTILVGCNFSEGADIDEQKMKDIVLNAKKHDVQVAISTKLTDDDDNIKFVRSYDEALSHLLFAGSDIILCRSFHDPTDETPRSNPSKWKRRIMEAMAHDLSWDGECYEVHVAAYSAIKNM*