Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0879650 | RHN39769.1 | 94.652 | 991 | 32 | 2 | 1 | 974 | 1 | 987 | 0.0 | 1942 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0879650 | sp|Q9SYX2|SPA1_ARATH | 50.595 | 840 | 347 | 15 | 157 | 974 | 236 | 1029 | 0.0 | 754 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0879650 | A0A396GEI4 | 94.652 | 991 | 32 | 2 | 1 | 974 | 1 | 987 | 0.0 | 1942 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa0879650 | 0.883220 | 5.394590e-71 | -8.615850e-47 |
| Msa0005690 | Msa0879650 | 0.814636 | 1.393049e-51 | -8.615850e-47 |
| Msa0009530 | Msa0879650 | 0.800511 | 1.392790e-48 | -8.615850e-47 |
| Msa0009560 | Msa0879650 | 0.813811 | 2.119088e-51 | -8.615850e-47 |
| Msa0012380 | Msa0879650 | 0.871103 | 8.817090e-67 | -8.615850e-47 |
| Msa0014590 | Msa0879650 | -0.803219 | 3.870230e-49 | -8.615850e-47 |
| Msa0018470 | Msa0879650 | 0.804702 | 1.902762e-49 | -8.615850e-47 |
| Msa0020320 | Msa0879650 | 0.819927 | 8.980285e-53 | -8.615850e-47 |
| Msa0024900 | Msa0879650 | 0.834671 | 2.619649e-56 | -8.615850e-47 |
| Msa0027030 | Msa0879650 | 0.807416 | 5.109442e-50 | -8.615850e-47 |
| Msa0034100 | Msa0879650 | 0.824526 | 7.693863e-54 | -8.615850e-47 |
| Msa0037270 | Msa0879650 | 0.841703 | 4.045049e-58 | -8.615850e-47 |
| Msa0044180 | Msa0879650 | 0.842992 | 1.842335e-58 | -8.615850e-47 |
| Msa0046050 | Msa0879650 | 0.879679 | 1.023078e-69 | -8.615850e-47 |
| Msa0053960 | Msa0879650 | 0.821664 | 3.580486e-53 | -8.615850e-47 |
| Msa0064550 | Msa0879650 | 0.842360 | 2.711266e-58 | -8.615850e-47 |
| Msa0072390 | Msa0879650 | 0.841180 | 5.555277e-58 | -8.615850e-47 |
| Msa0072830 | Msa0879650 | 0.824864 | 6.404677e-54 | -8.615850e-47 |
| Msa0072860 | Msa0879650 | 0.821281 | 4.388364e-53 | -8.615850e-47 |
| Msa0080810 | Msa0879650 | 0.851577 | 8.106752e-61 | -8.615850e-47 |
| Msa0081120 | Msa0879650 | 0.853872 | 1.793122e-61 | -8.615850e-47 |
| Msa0081790 | Msa0879650 | 0.825512 | 4.501856e-54 | -8.615850e-47 |
| Msa0085580 | Msa0879650 | 0.820810 | 5.635329e-53 | -8.615850e-47 |
| Msa0091090 | Msa0879650 | 0.813194 | 2.896432e-51 | -8.615850e-47 |
| Msa0096020 | Msa0879650 | 0.810172 | 1.315233e-50 | -8.615850e-47 |
| Msa0096510 | Msa0879650 | 0.816060 | 6.719217e-52 | -8.615850e-47 |
| Msa0101170 | Msa0879650 | -0.817991 | 2.473838e-52 | -8.615850e-47 |
| Msa0108070 | Msa0879650 | 0.809550 | 1.790337e-50 | -8.615850e-47 |
| Msa0109490 | Msa0879650 | 0.820745 | 5.832291e-53 | -8.615850e-47 |
| Msa0114700 | Msa0879650 | 0.838840 | 2.264742e-57 | -8.615850e-47 |
| Msa0116470 | Msa0879650 | 0.837044 | 6.556298e-57 | -8.615850e-47 |
| Msa0116510 | Msa0879650 | 0.851991 | 6.188064e-61 | -8.615850e-47 |
| Msa0120320 | Msa0879650 | 0.846401 | 2.222408e-59 | -8.615850e-47 |
| Msa0604880 | Msa0879650 | 0.860998 | 1.397219e-63 | -8.615850e-47 |
| Msa0605250 | Msa0879650 | 0.818281 | 2.127846e-52 | -8.615850e-47 |
| Msa0608780 | Msa0879650 | 0.838997 | 2.061527e-57 | -8.615850e-47 |
| Msa0610780 | Msa0879650 | 0.868312 | 7.167288e-66 | -8.615850e-47 |
| Msa0610810 | Msa0879650 | 0.861663 | 8.757810e-64 | -8.615850e-47 |
| Msa0614980 | Msa0879650 | 0.811596 | 6.468239e-51 | -8.615850e-47 |
| Msa0617120 | Msa0879650 | 0.802906 | 4.491313e-49 | -8.615850e-47 |
| Msa0619390 | Msa0879650 | 0.848822 | 4.797066e-60 | -8.615850e-47 |
| Msa0621780 | Msa0879650 | 0.819277 | 1.263648e-52 | -8.615850e-47 |
| Msa0622250 | Msa0879650 | 0.852508 | 4.407970e-61 | -8.615850e-47 |
| Msa0624040 | Msa0879650 | 0.854109 | 1.532156e-61 | -8.615850e-47 |
| Msa0624930 | Msa0879650 | -0.815132 | 1.081155e-51 | -8.615850e-47 |
| Msa0627050 | Msa0879650 | 0.856102 | 4.036530e-62 | -8.615850e-47 |
| Msa0634260 | Msa0879650 | 0.816337 | 5.826593e-52 | -8.615850e-47 |
| Msa0644630 | Msa0879650 | 0.810229 | 1.278537e-50 | -8.615850e-47 |
| Msa0645410 | Msa0879650 | 0.832088 | 1.153662e-55 | -8.615850e-47 |
| Msa0646190 | Msa0879650 | 0.885521 | 7.571801e-72 | -8.615850e-47 |
| Msa0646340 | Msa0879650 | 0.841287 | 5.205657e-58 | -8.615850e-47 |
| Msa0649250 | Msa0879650 | 0.836595 | 8.536560e-57 | -8.615850e-47 |
| Msa0649310 | Msa0879650 | 0.809769 | 1.606635e-50 | -8.615850e-47 |
| Msa0651310 | Msa0879650 | 0.875479 | 2.982659e-68 | -8.615850e-47 |
| Msa0654880 | Msa0879650 | 0.800924 | 1.147312e-48 | -8.615850e-47 |
| Msa0657300 | Msa0879650 | 0.808737 | 2.674162e-50 | -8.615850e-47 |
| Msa0659300 | Msa0879650 | -0.835308 | 1.809645e-56 | -8.615850e-47 |
| Msa0675010 | Msa0879650 | 0.852367 | 4.836083e-61 | -8.615850e-47 |
| Msa0679780 | Msa0879650 | 0.838131 | 3.449736e-57 | -8.615850e-47 |
| Msa0681210 | Msa0879650 | 0.835389 | 1.726112e-56 | -8.615850e-47 |
| Msa0685890 | Msa0879650 | 0.830615 | 2.658229e-55 | -8.615850e-47 |
| Msa0693400 | Msa0879650 | 0.871882 | 4.871647e-67 | -8.615850e-47 |
| Msa0693500 | Msa0879650 | 0.860583 | 1.866499e-63 | -8.615850e-47 |
| Msa0702200 | Msa0879650 | 0.810266 | 1.255787e-50 | -8.615850e-47 |
| Msa0702310 | Msa0879650 | 0.826137 | 3.199185e-54 | -8.615850e-47 |
| Msa0702360 | Msa0879650 | 0.837969 | 3.798776e-57 | -8.615850e-47 |
| Msa0702560 | Msa0879650 | 0.847218 | 1.328978e-59 | -8.615850e-47 |
| Msa0702620 | Msa0879650 | 0.823860 | 1.103121e-53 | -8.615850e-47 |
| Msa0705460 | Msa0879650 | -0.823643 | 1.240335e-53 | -8.615850e-47 |
| Msa0705810 | Msa0879650 | 0.873335 | 1.592977e-67 | -8.615850e-47 |
| Msa0712670 | Msa0879650 | 0.811227 | 7.779968e-51 | -8.615850e-47 |
| Msa0715510 | Msa0879650 | -0.815757 | 7.849504e-52 | -8.615850e-47 |
| Msa0738410 | Msa0879650 | -0.809047 | 2.295478e-50 | -8.615850e-47 |
| Msa0742090 | Msa0879650 | 0.861155 | 1.251284e-63 | -8.615850e-47 |
| Msa0748330 | Msa0879650 | 0.846512 | 2.073566e-59 | -8.615850e-47 |
| Msa0748980 | Msa0879650 | 0.836739 | 7.842888e-57 | -8.615850e-47 |
| Msa0749150 | Msa0879650 | 0.838433 | 2.885042e-57 | -8.615850e-47 |
| Msa0756440 | Msa0879650 | 0.803635 | 3.172734e-49 | -8.615850e-47 |
| Msa0756670 | Msa0879650 | 0.810259 | 1.260101e-50 | -8.615850e-47 |
| Msa0761830 | Msa0879650 | -0.800150 | 1.649360e-48 | -8.615850e-47 |
| Msa0776290 | Msa0879650 | 0.805517 | 1.285099e-49 | -8.615850e-47 |
| Msa0776590 | Msa0879650 | 0.805042 | 1.615637e-49 | -8.615850e-47 |
| Msa0786100 | Msa0879650 | 0.823208 | 1.567572e-53 | -8.615850e-47 |
| Msa0790640 | Msa0879650 | 0.842900 | 1.949030e-58 | -8.615850e-47 |
| Msa0792880 | Msa0879650 | 0.822097 | 2.841832e-53 | -8.615850e-47 |
| Msa0793100 | Msa0879650 | 0.868894 | 4.648412e-66 | -8.615850e-47 |
| Msa0795710 | Msa0879650 | 0.819075 | 1.405127e-52 | -8.615850e-47 |
| Msa0797980 | Msa0879650 | 0.805968 | 1.033196e-49 | -8.615850e-47 |
| Msa0803530 | Msa0879650 | 0.868643 | 5.604353e-66 | -8.615850e-47 |
| Msa0812970 | Msa0879650 | 0.824347 | 8.480323e-54 | -8.615850e-47 |
| Msa0823310 | Msa0879650 | 0.885920 | 5.361830e-72 | -8.615850e-47 |
| Msa0825520 | Msa0879650 | 0.841924 | 3.537114e-58 | -8.615850e-47 |
| Msa0828900 | Msa0879650 | 0.824324 | 8.585502e-54 | -8.615850e-47 |
| Msa0835550 | Msa0879650 | 0.800214 | 1.600709e-48 | -8.615850e-47 |
| Msa0836060 | Msa0879650 | 0.818853 | 1.577765e-52 | -8.615850e-47 |
| Msa0125600 | Msa0879650 | -0.801709 | 7.921540e-49 | -8.615850e-47 |
| Msa0128110 | Msa0879650 | 0.827454 | 1.550330e-54 | -8.615850e-47 |
| Msa0131090 | Msa0879650 | 0.829471 | 5.053167e-55 | -8.615850e-47 |
| Msa0135330 | Msa0879650 | -0.825308 | 5.030494e-54 | -8.615850e-47 |
| Msa0137010 | Msa0879650 | 0.838872 | 2.220792e-57 | -8.615850e-47 |
| Msa0143280 | Msa0879650 | 0.826719 | 2.324710e-54 | -8.615850e-47 |
| Msa0147540 | Msa0879650 | 0.850391 | 1.750193e-60 | -8.615850e-47 |
| Msa0154240 | Msa0879650 | 0.830924 | 2.232767e-55 | -8.615850e-47 |
| Msa0154270 | Msa0879650 | 0.833504 | 5.133938e-56 | -8.615850e-47 |
| Msa0163530 | Msa0879650 | 0.828761 | 7.509347e-55 | -8.615850e-47 |
| Msa0163960 | Msa0879650 | 0.826788 | 2.238451e-54 | -8.615850e-47 |
| Msa0167150 | Msa0879650 | 0.803899 | 2.796646e-49 | -8.615850e-47 |
| Msa0173370 | Msa0879650 | 0.846095 | 2.693429e-59 | -8.615850e-47 |
| Msa0180100 | Msa0879650 | 0.849416 | 3.278643e-60 | -8.615850e-47 |
| Msa0184510 | Msa0879650 | 0.858535 | 7.709404e-63 | -8.615850e-47 |
| Msa0185170 | Msa0879650 | 0.807493 | 4.919780e-50 | -8.615850e-47 |
| Msa0187980 | Msa0879650 | 0.998018 | 3.130203e-254 | -8.615850e-47 |
| Msa0195140 | Msa0879650 | 0.815356 | 9.641126e-52 | -8.615850e-47 |
| Msa0197030 | Msa0879650 | 0.838203 | 3.305354e-57 | -8.615850e-47 |
| Msa0197730 | Msa0879650 | 0.807562 | 4.756854e-50 | -8.615850e-47 |
| Msa0199490 | Msa0879650 | 0.822654 | 2.109726e-53 | -8.615850e-47 |
| Msa0202740 | Msa0879650 | 0.808362 | 3.215035e-50 | -8.615850e-47 |
| Msa0216220 | Msa0879650 | 0.804907 | 1.724578e-49 | -8.615850e-47 |
| Msa0218430 | Msa0879650 | 0.810590 | 1.068807e-50 | -8.615850e-47 |
| Msa0224370 | Msa0879650 | 0.817566 | 3.085300e-52 | -8.615850e-47 |
| Msa0224400 | Msa0879650 | 0.844045 | 9.637037e-59 | -8.615850e-47 |
| Msa0225880 | Msa0879650 | 0.833932 | 4.013425e-56 | -8.615850e-47 |
| Msa0367590 | Msa0879650 | 0.816176 | 6.328198e-52 | -8.615850e-47 |
| Msa0375570 | Msa0879650 | 0.829784 | 4.241271e-55 | -8.615850e-47 |
| Msa0378310 | Msa0879650 | 0.829832 | 4.128514e-55 | -8.615850e-47 |
| Msa0378670 | Msa0879650 | 0.800352 | 1.500387e-48 | -8.615850e-47 |
| Msa0378700 | Msa0879650 | 0.810566 | 1.081708e-50 | -8.615850e-47 |
| Msa0385770 | Msa0879650 | 0.803327 | 3.674736e-49 | -8.615850e-47 |
| Msa0392050 | Msa0879650 | 0.838620 | 2.580202e-57 | -8.615850e-47 |
| Msa0401340 | Msa0879650 | 0.800817 | 1.206391e-48 | -8.615850e-47 |
| Msa0404060 | Msa0879650 | 0.892468 | 1.543538e-74 | -8.615850e-47 |
| Msa0404070 | Msa0879650 | 0.871481 | 6.615629e-67 | -8.615850e-47 |
| Msa0416540 | Msa0879650 | 0.824895 | 6.298126e-54 | -8.615850e-47 |
| Msa0424220 | Msa0879650 | 0.828688 | 7.821548e-55 | -8.615850e-47 |
| Msa0425320 | Msa0879650 | 0.826453 | 2.690559e-54 | -8.615850e-47 |
| Msa0428330 | Msa0879650 | 0.845357 | 4.271137e-59 | -8.615850e-47 |
| Msa0430040 | Msa0879650 | 0.801893 | 7.263322e-49 | -8.615850e-47 |
| Msa0433670 | Msa0879650 | 0.807044 | 6.124778e-50 | -8.615850e-47 |
| Msa0437550 | Msa0879650 | 0.826674 | 2.382994e-54 | -8.615850e-47 |
| Msa0437790 | Msa0879650 | 0.882471 | 1.012925e-70 | -8.615850e-47 |
| Msa0457070 | Msa0879650 | 0.809276 | 2.049932e-50 | -8.615850e-47 |
| Msa0460220 | Msa0879650 | 0.808566 | 2.907771e-50 | -8.615850e-47 |
| Msa0465640 | Msa0879650 | 0.801181 | 1.016571e-48 | -8.615850e-47 |
| Msa0468360 | Msa0879650 | 0.842206 | 2.979159e-58 | -8.615850e-47 |
| Msa0469950 | Msa0879650 | 0.839553 | 1.479293e-57 | -8.615850e-47 |
| Msa0471130 | Msa0879650 | 0.813749 | 2.186252e-51 | -8.615850e-47 |
| Msa0471760 | Msa0879650 | 0.816639 | 4.986425e-52 | -8.615850e-47 |
| Msa0238860 | Msa0879650 | 0.842639 | 2.287671e-58 | -8.615850e-47 |
| Msa0240590 | Msa0879650 | 0.820888 | 5.405913e-53 | -8.615850e-47 |
| Msa0253160 | Msa0879650 | 0.862685 | 4.254740e-64 | -8.615850e-47 |
| Msa0260190 | Msa0879650 | 0.806402 | 8.372519e-50 | -8.615850e-47 |
| Msa0260470 | Msa0879650 | 0.834799 | 2.432541e-56 | -8.615850e-47 |
| Msa0269240 | Msa0879650 | -0.811854 | 5.683501e-51 | -8.615850e-47 |
| Msa0276590 | Msa0879650 | 0.811322 | 7.419648e-51 | -8.615850e-47 |
| Msa0276800 | Msa0879650 | 0.812881 | 3.391963e-51 | -8.615850e-47 |
| Msa0291940 | Msa0879650 | 0.859539 | 3.856404e-63 | -8.615850e-47 |
| Msa0303440 | Msa0879650 | 0.823918 | 1.069352e-53 | -8.615850e-47 |
| Msa0303500 | Msa0879650 | 0.837583 | 4.771996e-57 | -8.615850e-47 |
| Msa0303920 | Msa0879650 | -0.862034 | 6.743339e-64 | -8.615850e-47 |
| Msa0304060 | Msa0879650 | 0.806366 | 8.519283e-50 | -8.615850e-47 |
| Msa0304110 | Msa0879650 | 0.841483 | 4.623204e-58 | -8.615850e-47 |
| Msa0306160 | Msa0879650 | 0.806462 | 8.131910e-50 | -8.615850e-47 |
| Msa0316610 | Msa0879650 | 0.832314 | 1.014450e-55 | -8.615850e-47 |
| Msa0316720 | Msa0879650 | 0.800620 | 1.323486e-48 | -8.615850e-47 |
| Msa0319340 | Msa0879650 | 0.813657 | 2.290807e-51 | -8.615850e-47 |
| Msa0329910 | Msa0879650 | 0.825235 | 5.236747e-54 | -8.615850e-47 |
| Msa0341190 | Msa0879650 | 0.823845 | 1.112046e-53 | -8.615850e-47 |
| Msa0343370 | Msa0879650 | 0.825158 | 5.460753e-54 | -8.615850e-47 |
| Msa0344680 | Msa0879650 | 0.840818 | 6.915945e-58 | -8.615850e-47 |
| Msa0349930 | Msa0879650 | -0.816444 | 5.513039e-52 | -8.615850e-47 |
| Msa0485210 | Msa0879650 | 0.810637 | 1.044061e-50 | -8.615850e-47 |
| Msa0491770 | Msa0879650 | -0.801609 | 8.306471e-49 | -8.615850e-47 |
| Msa0508780 | Msa0879650 | 0.819197 | 1.317850e-52 | -8.615850e-47 |
| Msa0515460 | Msa0879650 | 0.818230 | 2.185058e-52 | -8.615850e-47 |
| Msa0518480 | Msa0879650 | 0.841348 | 5.017364e-58 | -8.615850e-47 |
| Msa0521940 | Msa0879650 | -0.808809 | 2.580747e-50 | -8.615850e-47 |
| Msa0525280 | Msa0879650 | 0.801358 | 9.350903e-49 | -8.615850e-47 |
| Msa0529360 | Msa0879650 | -0.811038 | 8.548933e-51 | -8.615850e-47 |
| Msa0530340 | Msa0879650 | 0.873779 | 1.128428e-67 | -8.615850e-47 |
| Msa0544600 | Msa0879650 | 0.816542 | 5.242617e-52 | -8.615850e-47 |
| Msa0545230 | Msa0879650 | 0.859690 | 3.474759e-63 | -8.615850e-47 |
| Msa0546080 | Msa0879650 | 0.822158 | 2.750547e-53 | -8.615850e-47 |
| Msa0547200 | Msa0879650 | -0.803475 | 3.424926e-49 | -8.615850e-47 |
| Msa0548210 | Msa0879650 | 0.814753 | 1.311897e-51 | -8.615850e-47 |
| Msa0549110 | Msa0879650 | 0.820961 | 5.200811e-53 | -8.615850e-47 |
| Msa0549540 | Msa0879650 | 0.864934 | 8.507280e-65 | -8.615850e-47 |
| Msa0556070 | Msa0879650 | 0.860803 | 1.600494e-63 | -8.615850e-47 |
| Msa0565760 | Msa0879650 | 0.815693 | 8.112163e-52 | -8.615850e-47 |
| Msa0565860 | Msa0879650 | 0.826709 | 2.337240e-54 | -8.615850e-47 |
| Msa0566090 | Msa0879650 | 0.816415 | 5.596032e-52 | -8.615850e-47 |
| Msa0569230 | Msa0879650 | 0.810495 | 1.120376e-50 | -8.615850e-47 |
| Msa0569930 | Msa0879650 | 0.820028 | 8.514523e-53 | -8.615850e-47 |
| Msa0570680 | Msa0879650 | 0.851306 | 9.672962e-61 | -8.615850e-47 |
| Msa0575380 | Msa0879650 | -0.812197 | 4.786728e-51 | -8.615850e-47 |
| Msa0576180 | Msa0879650 | -0.811383 | 7.197399e-51 | -8.615850e-47 |
| Msa0577050 | Msa0879650 | 0.863720 | 2.035654e-64 | -8.615850e-47 |
| Msa0579170 | Msa0879650 | 0.802674 | 5.015114e-49 | -8.615850e-47 |
| Msa0579230 | Msa0879650 | 0.815852 | 7.474966e-52 | -8.615850e-47 |
| Msa0580540 | Msa0879650 | 0.816651 | 4.954211e-52 | -8.615850e-47 |
| Msa0584280 | Msa0879650 | 0.801107 | 1.052322e-48 | -8.615850e-47 |
| Msa0587250 | Msa0879650 | 0.809458 | 1.873635e-50 | -8.615850e-47 |
| Msa0600820 | Msa0879650 | 0.807524 | 4.846638e-50 | -8.615850e-47 |
| Msa0601920 | Msa0879650 | -0.804042 | 2.611823e-49 | -8.615850e-47 |
| Msa0848720 | Msa0879650 | 0.812306 | 4.531360e-51 | -8.615850e-47 |
| Msa0862230 | Msa0879650 | 0.805699 | 1.177022e-49 | -8.615850e-47 |
| Msa0864730 | Msa0879650 | 0.844510 | 7.232166e-59 | -8.615850e-47 |
| Msa0864750 | Msa0879650 | 0.845457 | 4.012302e-59 | -8.615850e-47 |
| Msa0876030 | Msa0879650 | 0.802498 | 5.453586e-49 | -8.615850e-47 |
| Msa0879650 | Msa0887100 | 0.883637 | 3.789677e-71 | -8.615850e-47 |
| Msa0879650 | Msa0888820 | 0.810051 | 1.397204e-50 | -8.615850e-47 |
| Msa0879650 | Msa0892020 | 0.846509 | 2.077756e-59 | -8.615850e-47 |
| Msa0879650 | Msa0893840 | -0.804320 | 2.286469e-49 | -8.615850e-47 |
| Msa0879650 | Msa0899730 | 0.831375 | 1.729935e-55 | -8.615850e-47 |
| Msa0879650 | Msa0909720 | 0.809874 | 1.524824e-50 | -8.615850e-47 |
| Msa0879650 | Msa0912110 | 0.801808 | 7.561666e-49 | -8.615850e-47 |
| Msa0879650 | Msa0913140 | 0.849126 | 3.948780e-60 | -8.615850e-47 |
| Msa0879650 | Msa0915550 | 0.805040 | 1.617601e-49 | -8.615850e-47 |
| Msa0879650 | Msa0925630 | 0.838510 | 2.755541e-57 | -8.615850e-47 |
| Msa0879650 | Msa0928940 | 0.818846 | 1.583918e-52 | -8.615850e-47 |
| Msa0879650 | Msa0928970 | 0.837187 | 6.026337e-57 | -8.615850e-47 |
| Msa0879650 | Msa0930210 | -0.831688 | 1.448224e-55 | -8.615850e-47 |
| Msa0879650 | Msa0932150 | -0.814412 | 1.561040e-51 | -8.615850e-47 |
| Msa0879650 | Msa0936690 | 0.807413 | 5.115593e-50 | -8.615850e-47 |
| Msa0879650 | Msa0938370 | 0.833360 | 5.577422e-56 | -8.615850e-47 |
| Msa0879650 | Msa0944690 | 0.800404 | 1.464637e-48 | -8.615850e-47 |
| Msa0879650 | Msa0950470 | 0.831271 | 1.835345e-55 | -8.615850e-47 |
| Msa0879650 | Msa0950570 | 0.843656 | 1.224944e-58 | -8.615850e-47 |
| Msa0879650 | Msa0956910 | 0.842636 | 2.290615e-58 | -8.615850e-47 |
| Msa0879650 | Msa0964650 | 0.812434 | 4.247332e-51 | -8.615850e-47 |
| Msa0879650 | Msa0967900 | 0.813123 | 3.001276e-51 | -8.615850e-47 |
| Msa0879650 | Msa0968780 | 0.823545 | 1.307414e-53 | -8.615850e-47 |
| Msa0879650 | Msa0970270 | -0.815984 | 6.985336e-52 | -8.615850e-47 |
| Msa0879650 | Msa0973890 | 0.801703 | 7.943802e-49 | -8.615850e-47 |
| Msa0879650 | Msa0975440 | 0.828169 | 1.043976e-54 | -8.615850e-47 |
| Msa0879650 | Msa0975550 | 0.812622 | 3.864720e-51 | -8.615850e-47 |
| Msa0879650 | Msa0980980 | 0.814903 | 1.215708e-51 | -8.615850e-47 |
| Msa0879650 | Msa0984000 | 0.842720 | 2.175977e-58 | -8.615850e-47 |
| Msa0879650 | Msa0992190 | 0.831804 | 1.356118e-55 | -8.615850e-47 |
| Msa0879650 | Msa0999590 | 0.856002 | 4.317700e-62 | -8.615850e-47 |
| Msa0879650 | Msa1004720 | 0.819880 | 9.205741e-53 | -8.615850e-47 |
| Msa0879650 | Msa1010470 | 0.837863 | 4.042737e-57 | -8.615850e-47 |
| Msa0879650 | Msa1014700 | 0.842103 | 3.172085e-58 | -8.615850e-47 |
| Msa0879650 | Msa1028780 | 0.806118 | 9.607392e-50 | -8.615850e-47 |
| Msa0879650 | Msa1031150 | 0.808667 | 2.767477e-50 | -8.615850e-47 |
| Msa0879650 | Msa1031530 | 0.838975 | 2.089471e-57 | -8.615850e-47 |
| Msa0879650 | Msa1036020 | -0.811400 | 7.135052e-51 | -8.615850e-47 |
| Msa0879650 | Msa1040730 | -0.805876 | 1.080288e-49 | -8.615850e-47 |
| Msa0879650 | Msa1043020 | 0.816309 | 5.908925e-52 | -8.615850e-47 |
| Msa0879650 | Msa1052030 | 0.803880 | 2.822743e-49 | -8.615850e-47 |
| Msa0879650 | Msa1053690 | 0.800798 | 1.217047e-48 | -8.615850e-47 |
| Msa0879650 | Msa1053990 | -0.800171 | 1.633187e-48 | -8.615850e-47 |
| Msa0879650 | Msa1070630 | 0.819534 | 1.104176e-52 | -8.615850e-47 |
| Msa0879650 | Msa1076280 | -0.810009 | 1.426163e-50 | -8.615850e-47 |
| Msa0879650 | Msa1076830 | -0.812172 | 4.846186e-51 | -8.615850e-47 |
| Msa0879650 | Msa1078600 | 0.828590 | 8.263590e-55 | -8.615850e-47 |
| Msa0879650 | Msa1078730 | -0.806844 | 6.751040e-50 | -8.615850e-47 |
| Msa0879650 | Msa1078770 | 0.821355 | 4.218959e-53 | -8.615850e-47 |
| Msa0879650 | Msa1082150 | 0.843856 | 1.083463e-58 | -8.615850e-47 |
| Msa0879650 | Msa1088740 | 0.839601 | 1.436901e-57 | -8.615850e-47 |
| Msa0879650 | Msa1096510 | 0.815849 | 7.487291e-52 | -8.615850e-47 |
| Msa0879650 | Msa1096520 | 0.813829 | 2.099117e-51 | -8.615850e-47 |
| Msa0879650 | Msa1096570 | 0.829789 | 4.227795e-55 | -8.615850e-47 |
| Msa0879650 | Msa1101300 | 0.808409 | 3.142043e-50 | -8.615850e-47 |
| Msa0879650 | Msa1119570 | 0.814379 | 1.587480e-51 | -8.615850e-47 |
| Msa0879650 | Msa1122720 | 0.837778 | 4.251158e-57 | -8.615850e-47 |
| Msa0879650 | Msa1125450 | 0.813876 | 2.049532e-51 | -8.615850e-47 |
| Msa0879650 | Msa1127910 | -0.808389 | 3.172787e-50 | -8.615850e-47 |
| Msa0879650 | Msa1133440 | 0.828091 | 1.089794e-54 | -8.615850e-47 |
| Msa0879650 | Msa1140480 | 0.850875 | 1.279527e-60 | -8.615850e-47 |
| Msa0879650 | Msa1143860 | 0.816933 | 4.282373e-52 | -8.615850e-47 |
| Msa0879650 | Msa1144730 | 0.839481 | 1.544235e-57 | -8.615850e-47 |
| Msa0879650 | Msa1158450 | 0.827994 | 1.150213e-54 | -8.615850e-47 |
| Msa0879650 | Msa1164570 | 0.817192 | 3.746541e-52 | -8.615850e-47 |
| Msa0879650 | Msa1166960 | 0.848675 | 5.269973e-60 | -8.615850e-47 |
| Msa0879650 | Msa1169600 | 0.819160 | 1.343397e-52 | -8.615850e-47 |
| Msa0879650 | Msa1173380 | 0.880232 | 6.502694e-70 | -8.615850e-47 |
| Msa0879650 | Msa1181510 | 0.807057 | 6.087182e-50 | -8.615850e-47 |
| Msa0879650 | Msa1181730 | 0.816550 | 5.220494e-52 | -8.615850e-47 |
| Msa0879650 | Msa1182800 | 0.826389 | 2.786945e-54 | -8.615850e-47 |
| Msa0879650 | Msa1184010 | 0.823262 | 1.522813e-53 | -8.615850e-47 |
| Msa0879650 | Msa1190350 | 0.852429 | 4.643898e-61 | -8.615850e-47 |
| Msa0879650 | Msa1191960 | 0.819983 | 8.717978e-53 | -8.615850e-47 |
| Msa0879650 | Msa1202220 | 0.805960 | 1.036988e-49 | -8.615850e-47 |
| Msa0879650 | Msa1205270 | 0.811749 | 5.992311e-51 | -8.615850e-47 |
| Msa0879650 | Msa1209160 | 0.869819 | 2.325671e-66 | -8.615850e-47 |
| Msa0879650 | Msa1219060 | 0.871195 | 8.222413e-67 | -8.615850e-47 |
| Msa0879650 | Msa1220680 | 0.807320 | 5.353894e-50 | -8.615850e-47 |
| Msa0879650 | Msa1224820 | 0.841498 | 4.582838e-58 | -8.615850e-47 |
| Msa0879650 | Msa1225140 | 0.815989 | 6.967698e-52 | -8.615850e-47 |
| Msa0879650 | Msa1228350 | 0.826458 | 2.683445e-54 | -8.615850e-47 |
| Msa0879650 | Msa1228460 | 0.830858 | 2.317919e-55 | -8.615850e-47 |
| Msa0879650 | Msa1228600 | 0.800507 | 1.395503e-48 | -8.615850e-47 |
| Msa0879650 | Msa1236860 | 0.927953 | 5.719671e-92 | -8.615850e-47 |
| Msa0879650 | Msa1237970 | 0.825389 | 4.814040e-54 | -8.615850e-47 |
| Msa0879650 | Msa1239900 | 0.821226 | 4.519114e-53 | -8.615850e-47 |
| Msa0879650 | Msa1243630 | 0.858942 | 5.825111e-63 | -8.615850e-47 |
| Msa0879650 | Msa1244220 | 0.859900 | 3.003238e-63 | -8.615850e-47 |
| Msa0879650 | Msa1249410 | 0.814492 | 1.498572e-51 | -8.615850e-47 |
| Msa0879650 | Msa1255020 | 0.877910 | 4.299439e-69 | -8.615850e-47 |
| Msa0879650 | Msa1257100 | 0.800155 | 1.645582e-48 | -8.615850e-47 |
| Msa0879650 | Msa1270860 | 0.811620 | 6.392040e-51 | -8.615850e-47 |
| Msa0879650 | Msa1272950 | 0.802107 | 6.562717e-49 | -8.615850e-47 |
| Msa0879650 | Msa1288970 | 0.802149 | 6.432436e-49 | -8.615850e-47 |
| Msa0879650 | Msa1295470 | 0.878876 | 1.969393e-69 | -8.615850e-47 |
| Msa0879650 | Msa1297220 | 0.840409 | 8.846916e-58 | -8.615850e-47 |
| Msa0879650 | Msa1303760 | 0.858962 | 5.745610e-63 | -8.615850e-47 |
| Msa0879650 | Msa1303820 | 0.860041 | 2.723125e-63 | -8.615850e-47 |
| Msa0879650 | Msa1308010 | 0.825261 | 5.161799e-54 | -8.615850e-47 |
| Msa0879650 | Msa1317240 | 0.902562 | 8.543382e-79 | -8.615850e-47 |
| Msa0879650 | Msa1323260 | 0.834217 | 3.406250e-56 | -8.615850e-47 |
| Msa0879650 | Msa1332690 | 0.853305 | 2.609284e-61 | -8.615850e-47 |
| Msa0879650 | Msa1335210 | 0.814993 | 1.160579e-51 | -8.615850e-47 |
| Msa0879650 | Msa1338180 | 0.823803 | 1.137692e-53 | -8.615850e-47 |
| Msa0879650 | Msa1338590 | 0.826331 | 2.876225e-54 | -8.615850e-47 |
| Msa0879650 | Msa1343450 | 0.853023 | 3.142453e-61 | -8.615850e-47 |
| Msa0879650 | Msa1346220 | 0.801189 | 1.012527e-48 | -8.615850e-47 |
| Msa0879650 | Msa1348330 | -0.802803 | 4.717665e-49 | -8.615850e-47 |
| Msa0879650 | Msa1349810 | 0.847686 | 9.881644e-60 | -8.615850e-47 |
| Msa0879650 | Msa1356730 | 0.813612 | 2.343883e-51 | -8.615850e-47 |
| Msa0879650 | Msa1358340 | 0.834968 | 2.204650e-56 | -8.615850e-47 |
| Msa0879650 | Msa1359890 | 0.880394 | 5.693152e-70 | -8.615850e-47 |
| Msa0879650 | Msa1363070 | 0.865773 | 4.629423e-65 | -8.615850e-47 |
| Msa0879650 | Msa1369180 | 0.859807 | 3.202390e-63 | -8.615850e-47 |
| Msa0879650 | Msa1369390 | 0.813057 | 3.103678e-51 | -8.615850e-47 |
| Msa0879650 | Msa1373390 | 0.892725 | 1.217567e-74 | -8.615850e-47 |
| Msa0879650 | Msa1375780 | 0.861746 | 8.262573e-64 | -8.615850e-47 |
| Msa0879650 | Msa1376010 | 0.817031 | 4.070424e-52 | -8.615850e-47 |
| Msa0879650 | Msa1376070 | -0.815348 | 9.681864e-52 | -8.615850e-47 |
| Msa0879650 | Msa1379270 | 0.813229 | 2.845093e-51 | -8.615850e-47 |
| Msa0879650 | Msa1382750 | 0.855875 | 4.702452e-62 | -8.615850e-47 |
| Msa0879650 | Msa1384620 | 0.842485 | 2.513207e-58 | -8.615850e-47 |
| Msa0879650 | Msa1386250 | 0.826490 | 2.637091e-54 | -8.615850e-47 |
| Msa0879650 | Msa1387480 | -0.808642 | 2.801424e-50 | -8.615850e-47 |
| Msa0879650 | Msa1394900 | 0.830063 | 3.625598e-55 | -8.615850e-47 |
| Msa0879650 | Msa1396550 | -0.805393 | 1.363944e-49 | -8.615850e-47 |
| Msa0879650 | Msa1403950 | 0.805536 | 1.273056e-49 | -8.615850e-47 |
| Msa0879650 | Msa1404690 | 0.821452 | 4.007276e-53 | -8.615850e-47 |
| Msa0879650 | Msa1405380 | 0.821539 | 3.827205e-53 | -8.615850e-47 |
| Msa0879650 | Msa1406020 | 0.810992 | 8.747786e-51 | -8.615850e-47 |
| Msa0879650 | Msa1418840 | 0.814091 | 1.837724e-51 | -8.615850e-47 |
| Msa0879650 | Msa1421130 | -0.808290 | 3.330296e-50 | -8.615850e-47 |
| Msa0879650 | Msa1427600 | 0.818937 | 1.510020e-52 | -8.615850e-47 |
| Msa0879650 | Msa1430630 | 0.804613 | 1.986476e-49 | -8.615850e-47 |
| Msa0879650 | Msa1431240 | 0.815418 | 9.341610e-52 | -8.615850e-47 |
| Msa0879650 | Msa1436660 | 0.814153 | 1.780615e-51 | -8.615850e-47 |
| Msa0879650 | Msa1450630 | 0.847451 | 1.147086e-59 | -8.615850e-47 |
| Msa0879650 | Msa1450780 | 0.875904 | 2.132674e-68 | -8.615850e-47 |
| Msa0879650 | Msa1451690 | 0.805418 | 1.347849e-49 | -8.615850e-47 |
| Msa0879650 | Msa1452560 | 0.800108 | 1.682224e-48 | -8.615850e-47 |
| Msa0879650 | Msa1453540 | 0.803673 | 3.115661e-49 | -8.615850e-47 |
| Msa0879650 | Msa1456620 | 0.836245 | 1.047945e-56 | -8.615850e-47 |
| Msa0879650 | Msa1459540 | 0.851988 | 6.199805e-61 | -8.615850e-47 |
| Msa0879650 | Msa1466130 | -0.811620 | 6.392813e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0879650 | MtrunA17_Chr8g0347471 | 94.652 | 991 | 32 | 2 | 1 | 974 | 1 | 987 | 0.0 | 1942 |
| Msa0879650 | MtrunA17_Chr5g0396821 | 44.862 | 1012 | 419 | 28 | 38 | 974 | 87 | 1034 | 0.0 | 736 |
| Msa0879650 | MtrunA17_Chr2g0317491 | 39.785 | 837 | 404 | 17 | 200 | 974 | 77 | 875 | 4.04e-176 | 535 |
| Msa0879650 | MtrunA17_Chr5g0438901 | 43.575 | 358 | 183 | 4 | 617 | 973 | 336 | 675 | 2.26e-98 | 324 |
| Msa0879650 | MtrunA17_Chr2g0283891 | 24.453 | 274 | 173 | 10 | 653 | 915 | 60 | 310 | 3.45e-14 | 74.7 |
| Msa0879650 | MtrunA17_Chr1g0197551 | 26.848 | 257 | 149 | 11 | 724 | 961 | 29 | 265 | 6.43e-12 | 70.1 |
| Msa0879650 | MtrunA17_Chr7g0253861 | 22.593 | 270 | 185 | 9 | 650 | 914 | 51 | 301 | 2.72e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0879650 | AT2G46340.1 | 50.595 | 840 | 347 | 15 | 157 | 974 | 236 | 1029 | 0.0 | 754 |
| Msa0879650 | AT2G46340.2 | 50.595 | 840 | 347 | 15 | 157 | 974 | 236 | 1029 | 0.0 | 754 |
| Msa0879650 | AT4G11110.1 | 47.382 | 783 | 367 | 13 | 195 | 974 | 296 | 1036 | 0.0 | 679 |
| Msa0879650 | AT3G15354.3 | 38.378 | 826 | 401 | 16 | 200 | 974 | 76 | 844 | 0.0 | 555 |
| Msa0879650 | AT3G15354.1 | 37.772 | 826 | 398 | 16 | 200 | 974 | 76 | 836 | 6.14e-178 | 538 |
| Msa0879650 | AT1G53090.3 | 41.379 | 667 | 337 | 12 | 342 | 974 | 148 | 794 | 1.14e-166 | 508 |
| Msa0879650 | AT1G53090.3 | 37.634 | 93 | 54 | 2 | 170 | 262 | 38 | 126 | 2.02e-11 | 68.6 |
| Msa0879650 | AT1G53090.1 | 41.379 | 667 | 337 | 12 | 342 | 974 | 148 | 794 | 1.14e-166 | 508 |
| Msa0879650 | AT1G53090.1 | 37.634 | 93 | 54 | 2 | 170 | 262 | 38 | 126 | 2.02e-11 | 68.6 |
| Msa0879650 | AT1G53090.2 | 41.379 | 667 | 337 | 12 | 342 | 974 | 148 | 794 | 1.14e-166 | 508 |
| Msa0879650 | AT1G53090.2 | 37.634 | 93 | 54 | 2 | 170 | 262 | 38 | 126 | 2.02e-11 | 68.6 |
| Msa0879650 | AT3G15354.4 | 42.669 | 607 | 288 | 11 | 415 | 974 | 1 | 594 | 2.56e-158 | 479 |
| Msa0879650 | AT3G15354.5 | 42.669 | 607 | 288 | 11 | 415 | 974 | 1 | 594 | 2.56e-158 | 479 |
| Msa0879650 | AT1G53090.4 | 42.496 | 593 | 288 | 11 | 415 | 974 | 1 | 573 | 9.05e-155 | 469 |
| Msa0879650 | AT3G15354.2 | 32.965 | 634 | 327 | 13 | 200 | 782 | 76 | 662 | 2.57e-106 | 345 |
| Msa0879650 | AT2G32950.2 | 39.456 | 441 | 229 | 6 | 536 | 973 | 155 | 560 | 8.56e-101 | 327 |
| Msa0879650 | AT2G32950.1 | 39.367 | 442 | 230 | 6 | 536 | 974 | 268 | 674 | 1.74e-99 | 327 |
| Msa0879650 | AT1G53090.5 | 35.865 | 474 | 260 | 9 | 342 | 781 | 148 | 611 | 1.32e-88 | 296 |
| Msa0879650 | AT1G53090.5 | 33.929 | 112 | 70 | 2 | 151 | 262 | 19 | 126 | 1.72e-11 | 68.6 |
| Msa0879650 | AT5G23730.1 | 35.088 | 342 | 175 | 15 | 655 | 970 | 41 | 361 | 6.46e-44 | 164 |
| Msa0879650 | AT5G52250.1 | 32.432 | 333 | 191 | 11 | 652 | 971 | 69 | 380 | 5.45e-42 | 159 |
| Msa0879650 | AT2G21390.1 | 27.692 | 260 | 143 | 12 | 724 | 961 | 29 | 265 | 6.72e-13 | 73.6 |
| Msa0879650 | AT1G62020.1 | 27.027 | 259 | 146 | 11 | 724 | 961 | 29 | 265 | 1.80e-12 | 72.4 |
| Msa0879650 | AT2G43770.1 | 25.161 | 310 | 196 | 14 | 650 | 943 | 48 | 337 | 5.34e-11 | 65.9 |
Find 169 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTGTGACTTAACCTTTA+AGG | 0.103884 | 6_1:-22279487 | Msa0879650:CDS |
| TCCATTACTATGACCCTTAA+AGG | 0.147618 | 6_1:+22279473 | None:intergenic |
| GCTTCTTTGCACTCAAATTT+TGG | 0.148667 | 6_1:+22281964 | None:intergenic |
| GTATATATTTAAACAGATTT+TGG | 0.151402 | 6_1:-22282210 | Msa0879650:CDS |
| TTCTGAATTCAAGTATTTAT+TGG | 0.172653 | 6_1:-22283301 | Msa0879650:five_prime_UTR |
| GAGTCAGTCGATCCCATTTC+TGG | 0.205018 | 6_1:-22278871 | Msa0879650:CDS |
| TTTCGTTGGTTTATCTGTTT+TGG | 0.225023 | 6_1:-22279363 | Msa0879650:CDS |
| GTTTCCTCATTGATCACTTC+TGG | 0.244539 | 6_1:+22281738 | None:intergenic |
| CTCAGACCAGTGATTTATTC+AGG | 0.251637 | 6_1:-22278709 | Msa0879650:three_prime_UTR |
| AATGACGAATAAAGCTTAAA+TGG | 0.277827 | 6_1:-22278675 | Msa0879650:three_prime_UTR |
| TTGTTTGAACGAAGATATTA+AGG | 0.291136 | 6_1:-22280884 | Msa0879650:CDS |
| CTAGATTATGCACACCTATT+AGG | 0.295650 | 6_1:-22282796 | Msa0879650:CDS |
| TGAATTTATACGCGAATTAG+AGG | 0.317112 | 6_1:-22281040 | Msa0879650:CDS |
| ATAGAACCTTGAATTCTCTT+TGG | 0.319753 | 6_1:+22280577 | None:intergenic |
| GCTTGTGACTTAACCTTTAA+GGG | 0.321542 | 6_1:-22279486 | Msa0879650:CDS |
| CAGCTTCCTTGAGCGGGCCT+TGG | 0.322871 | 6_1:+22280677 | None:intergenic |
| TCTAGTTATCCTCAATTGTT+AGG | 0.324872 | 6_1:-22282374 | Msa0879650:CDS |
| TACATTTGCAGGGCTCATTA+TGG | 0.325837 | 6_1:+22279749 | None:intergenic |
| ACTATTTGAATGACCAGAAA+TGG | 0.327746 | 6_1:+22278858 | None:intergenic |
| AAGAGAATTCAAGGTTCTAT+TGG | 0.336597 | 6_1:-22280574 | Msa0879650:CDS |
| CATAATGCTTTACCTGGTAT+TGG | 0.338301 | 6_1:+22281211 | None:intergenic |
| CATCACTTCAACTGTATTCA+TGG | 0.343911 | 6_1:-22281903 | Msa0879650:CDS |
| TGAACACAGCATACATTTGC+AGG | 0.344827 | 6_1:+22279738 | None:intergenic |
| GAATTAGAGGCATCAAATTC+TGG | 0.345543 | 6_1:-22281027 | Msa0879650:CDS |
| AACCAGAGAGTTATTGCTAT+TGG | 0.351564 | 6_1:+22283230 | None:intergenic |
| TGATTATGATGGTGTGGTTC+AGG | 0.361466 | 6_1:-22280248 | Msa0879650:intron |
| AAGAACTTGACTGTAGCTTT+AGG | 0.367404 | 6_1:-22282632 | Msa0879650:CDS |
| TTGGGACGAGAAGACGGTTC+AGG | 0.370665 | 6_1:+22281230 | None:intergenic |
| TTTGCTTCCTTAGCTGGATC+TGG | 0.370766 | 6_1:-22282728 | Msa0879650:CDS |
| CGTATTTAAGTCATGTCTTA+AGG | 0.371979 | 6_1:-22282045 | Msa0879650:CDS |
| TTGTTGAAAAGTTACATGTT+AGG | 0.373891 | 6_1:-22282661 | Msa0879650:CDS |
| ATAATGCTTTACCTGGTATT+GGG | 0.391610 | 6_1:+22281212 | None:intergenic |
| TCATCAAATGTTTATAGCCT+TGG | 0.392309 | 6_1:-22281705 | Msa0879650:CDS |
| CTAATAGGTGTGCATAATCT+AGG | 0.402336 | 6_1:+22282797 | None:intergenic |
| AATTTGTTTCTAGTGTCTGC+TGG | 0.402719 | 6_1:-22278819 | Msa0879650:CDS |
| CAAGGTTCTATTGGTTGTCT+AGG | 0.404862 | 6_1:-22280565 | Msa0879650:CDS |
| CAGATTAAGCAAAGGACAAA+AGG | 0.405341 | 6_1:-22282510 | Msa0879650:CDS |
| ATGATTGTTCTGTCAAACTA+TGG | 0.406776 | 6_1:-22279987 | Msa0879650:CDS |
| ATTTAGAGAATGTTGGTAAT+GGG | 0.407051 | 6_1:-22280600 | Msa0879650:CDS |
| CTGATAACTCTTTGAAGCTA+TGG | 0.412942 | 6_1:-22279548 | Msa0879650:CDS |
| CACCTGTGATTAAATTCAAA+AGG | 0.414535 | 6_1:+22278466 | None:intergenic |
| AAAAGGGAATTGATTCTAGA+AGG | 0.422294 | 6_1:-22282493 | Msa0879650:CDS |
| AATCACTTGAAATAGCATTA+AGG | 0.427015 | 6_1:+22280368 | None:intergenic |
| GACATAGTTTCAAGTTCAAT+CGG | 0.434114 | 6_1:+22278311 | None:intergenic |
| AATCTAGGTGACCTTGGAAA+AGG | 0.435987 | 6_1:+22282812 | None:intergenic |
| TGCTTCATACATCTCTTGTT+CGG | 0.436455 | 6_1:+22278504 | None:intergenic |
| ATTGAAGGAACTGCATGAAT+TGG | 0.438287 | 6_1:-22282902 | Msa0879650:intron |
| ACCTTTAAGGGTCATAGTAA+TGG | 0.442210 | 6_1:-22279474 | Msa0879650:CDS |
| TTGCATATACCTTCATAGAA+AGG | 0.447291 | 6_1:+22280541 | None:intergenic |
| GCTTCATCAACACATGAACT+TGG | 0.458292 | 6_1:+22280754 | None:intergenic |
| TGAAGAGACAGCATCTCTTA+AGG | 0.463340 | 6_1:-22281931 | Msa0879650:CDS |
| GAGGAACTGAAGAGCATAAG+AGG | 0.464134 | 6_1:-22282847 | Msa0879650:CDS |
| TTCATCGCGGTCAAAACTTA+AGG | 0.464544 | 6_1:+22280438 | None:intergenic |
| AAAGAAAGGCTGTGCGTTGA+TGG | 0.465033 | 6_1:-22281843 | Msa0879650:CDS |
| CTCCAATAGCAATAACTCTC+TGG | 0.468856 | 6_1:-22283232 | Msa0879650:intron |
| TTGAATAAAATTAAATACAT+TGG | 0.469482 | 6_1:-22282113 | Msa0879650:CDS |
| CAAATCTCTGCCAGTGCCAA+TGG | 0.470603 | 6_1:-22278908 | Msa0879650:CDS |
| CATTTAGAGAATGTTGGTAA+TGG | 0.473306 | 6_1:-22280601 | Msa0879650:CDS |
| ATATATGTGATGTATCGAAT+AGG | 0.473832 | 6_1:-22278342 | Msa0879650:three_prime_UTR |
| TAAGACATGACTGCAAATAG+TGG | 0.475104 | 6_1:-22282872 | Msa0879650:exon |
| TGTCTAGGACCTTTCTATGA+AGG | 0.475887 | 6_1:-22280550 | Msa0879650:CDS |
| ATTAGGAAGGAAAATGTGAT+TGG | 0.478880 | 6_1:-22282779 | Msa0879650:CDS |
| GCTGTGCAATATTGAGTCAT+TGG | 0.479826 | 6_1:-22281357 | Msa0879650:CDS |
| AAGGCCATCATGGCCTGTAA+TGG | 0.480729 | 6_1:-22282026 | Msa0879650:CDS |
| TTTCTTCTCCAGAATTTCGT+TGG | 0.480988 | 6_1:-22279377 | Msa0879650:intron |
| CGGCTGCAGCTTCCTTGAGC+GGG | 0.481237 | 6_1:+22280671 | None:intergenic |
| CTATTTGAATGACCAGAAAT+GGG | 0.481751 | 6_1:+22278859 | None:intergenic |
| TTACTGGAAGAATCATGATA+AGG | 0.482054 | 6_1:+22280796 | None:intergenic |
| TTGTGAGAAGCCATTGGCAC+TGG | 0.482764 | 6_1:+22278898 | None:intergenic |
| TTGTTTGACATCTCAACGAC+AGG | 0.486265 | 6_1:+22280328 | None:intergenic |
| GAGAAAACAGTGAAGGGAAA+GGG | 0.487106 | 6_1:-22282350 | Msa0879650:CDS |
| GCGGCTGCAGCTTCCTTGAG+CGG | 0.488025 | 6_1:+22280670 | None:intergenic |
| TAAATGAGGCAATCTCCATC+TGG | 0.493793 | 6_1:+22280618 | None:intergenic |
| AACAATCTGTTTAGGATCTG+TGG | 0.494462 | 6_1:+22282679 | None:intergenic |
| CGTCTTCTCGTCCCAATACC+AGG | 0.496888 | 6_1:-22281223 | Msa0879650:intron |
| ATGGAACAAGGAAAATGCCT+TGG | 0.499042 | 6_1:-22282007 | Msa0879650:CDS |
| TGATACTGTCTTAAATTATG+TGG | 0.500293 | 6_1:+22282602 | None:intergenic |
| AGAGAAAACAGTGAAGGGAA+AGG | 0.500835 | 6_1:-22282351 | Msa0879650:CDS |
| CTTGTTGCAGCCAACTCAGT+TGG | 0.503279 | 6_1:-22278778 | Msa0879650:CDS |
| TGTTCCATTACAGGCCATGA+TGG | 0.504473 | 6_1:+22282022 | None:intergenic |
| AATGGGCCAAAGAGAATTCA+AGG | 0.506547 | 6_1:-22280583 | Msa0879650:CDS |
| AATCAAGGGTTGATAAAGAA+AGG | 0.507494 | 6_1:-22281857 | Msa0879650:CDS |
| CAAAGCTCAGTTGTGTGTGC+TGG | 0.508113 | 6_1:-22280303 | Msa0879650:CDS |
| ATCTAGGTGACCTTGGAAAA+GGG | 0.515860 | 6_1:+22282813 | None:intergenic |
| TCACAAAATGCAAAGGAAGC+TGG | 0.517461 | 6_1:-22281275 | Msa0879650:CDS |
| TGATAACTCTTTGAAGCTAT+GGG | 0.517563 | 6_1:-22279547 | Msa0879650:CDS |
| CAGATGTGGGATGCAGGCAC+TGG | 0.519169 | 6_1:-22280102 | Msa0879650:CDS |
| GTAGAAAGAAATCATTCGTA+TGG | 0.520653 | 6_1:-22280859 | Msa0879650:CDS |
| TTCGTAACACTAAAATCCCT+TGG | 0.524049 | 6_1:-22279647 | Msa0879650:CDS |
| TTGCCTCATTTAGAGAATGT+TGG | 0.524574 | 6_1:-22280607 | Msa0879650:CDS |
| TGGACTCAGATGTGGGATGC+AGG | 0.524887 | 6_1:-22280108 | Msa0879650:intron |
| TTTGGTCATCAAACACATGT+TGG | 0.526232 | 6_1:+22282081 | None:intergenic |
| TTACCAACATTCTCTAAATG+AGG | 0.528415 | 6_1:+22280604 | None:intergenic |
| TCGAATTTGTGAGAAGCCAT+TGG | 0.529274 | 6_1:+22278892 | None:intergenic |
| CTTAAGACATGACTTAAATA+CGG | 0.529408 | 6_1:+22282046 | None:intergenic |
| TGGGACGAGAAGACGGTTCA+GGG | 0.532561 | 6_1:+22281231 | None:intergenic |
| AAGCTTAAATGGAGAGGAGA+GGG | 0.533838 | 6_1:-22278664 | Msa0879650:three_prime_UTR |
| CTCGTTAGATTCTGAACCAC+AGG | 0.533992 | 6_1:+22279328 | None:intergenic |
| GTCATGTCTTAAGGCCATCA+TGG | 0.534541 | 6_1:-22282036 | Msa0879650:CDS |
| TGGAGCATCAAAAGAGAGCT+TGG | 0.534740 | 6_1:-22280059 | Msa0879650:CDS |
| ATCCCTTGGTGTACATTACC+TGG | 0.537374 | 6_1:-22279633 | Msa0879650:CDS |
| TTTCACAATTCCAACTGAGT+TGG | 0.539152 | 6_1:+22278768 | None:intergenic |
| CAATTCAGTTTGAAGAGAAG+TGG | 0.541430 | 6_1:-22281770 | Msa0879650:CDS |
| TTGAAGCCTGAATAAATCAC+TGG | 0.541978 | 6_1:+22278703 | None:intergenic |
| TGGAACAAGGAAAATGCCTT+GGG | 0.542068 | 6_1:-22282006 | Msa0879650:CDS |
| TACTTCTCCATGAGATTCCA+AGG | 0.543464 | 6_1:-22280694 | Msa0879650:CDS |
| GAGTTTAAATTGTTTCAAAG+AGG | 0.544146 | 6_1:-22278637 | Msa0879650:three_prime_UTR |
| AGATTAAGCAAAGGACAAAA+GGG | 0.544395 | 6_1:-22282509 | Msa0879650:CDS |
| TAGTTTCAAGTTCAATCGGC+CGG | 0.547842 | 6_1:+22278315 | None:intergenic |
| TTAGGAGAGAAAACAGTGAA+GGG | 0.548315 | 6_1:-22282356 | Msa0879650:CDS |
| GAGCGGGCCTTGGAATCTCA+TGG | 0.550025 | 6_1:+22280687 | None:intergenic |
| ACACTCTCAAGGGTTTGTCT+TGG | 0.554478 | 6_1:-22282171 | Msa0879650:CDS |
| TCAGCCACTGTCTCAATACA+TGG | 0.556787 | 6_1:-22280079 | Msa0879650:CDS |
| GATGAAGACTACATTGCAGC+AGG | 0.558236 | 6_1:-22280421 | Msa0879650:CDS |
| GTTAGGAGAGAAAACAGTGA+AGG | 0.558574 | 6_1:-22282357 | Msa0879650:CDS |
| GTGCATAATCTAGGTGACCT+TGG | 0.558844 | 6_1:+22282806 | None:intergenic |
| AAGCAGTGATAAAAGTGTGA+TGG | 0.568908 | 6_1:-22280644 | Msa0879650:CDS |
| AGAACAATCATCACTTCCAC+TGG | 0.572949 | 6_1:+22279999 | None:intergenic |
| CTGGCATCTACTGATTATGA+TGG | 0.573907 | 6_1:-22280259 | Msa0879650:CDS |
| TAAGGGTCATAGTAATGGAA+AGG | 0.576196 | 6_1:-22279469 | Msa0879650:intron |
| GAGATTCCAAGGCCCGCTCA+AGG | 0.576812 | 6_1:-22280683 | Msa0879650:CDS |
| AAAGTGTGATGGAAACCAGA+TGG | 0.581140 | 6_1:-22280633 | Msa0879650:CDS |
| AGATAGTTCGATTGTGACGA+TGG | 0.583360 | 6_1:+22280820 | None:intergenic |
| TGGTGTACATTACCTGGTCA+TGG | 0.585385 | 6_1:-22279627 | Msa0879650:CDS |
| GCACAGGTATCTTGTTCCCA+AGG | 0.586975 | 6_1:+22281990 | None:intergenic |
| CTGGTATTGGGACGAGAAGA+CGG | 0.587976 | 6_1:+22281224 | None:intergenic |
| CTCTTTAAAATATCATCAAG+TGG | 0.588090 | 6_1:-22278425 | Msa0879650:three_prime_UTR |
| TACTGTCTTAAATTATGTGG+AGG | 0.588479 | 6_1:+22282605 | None:intergenic |
| CGAATAAAGCTTAAATGGAG+AGG | 0.589646 | 6_1:-22278670 | Msa0879650:three_prime_UTR |
| ATCTACTGATTATGATGGTG+TGG | 0.590834 | 6_1:-22280254 | Msa0879650:CDS |
| AGGAGGTCCAGATCCAGCTA+AGG | 0.590988 | 6_1:+22282721 | None:intergenic |
| TCGGCTGATTACAAAGTGTA+CGG | 0.592155 | 6_1:-22279678 | Msa0879650:CDS |
| ATGACTGCAAATAGTGGGAG+AGG | 0.592738 | 6_1:-22282866 | Msa0879650:CDS |
| CATAATCAGTAGATGCCAGA+TGG | 0.607853 | 6_1:+22280263 | None:intergenic |
| AAGACATGACTGCAAATAGT+GGG | 0.609137 | 6_1:-22282871 | Msa0879650:exon |
| CTAACAGCTTTACCATGACC+AGG | 0.613394 | 6_1:+22279615 | None:intergenic |
| TTGGATGGATACATTGCCTG+TGG | 0.613457 | 6_1:-22279344 | Msa0879650:CDS |
| GAGAGTTATTGCTATTGGAG+AGG | 0.615651 | 6_1:+22283235 | None:intergenic |
| ACTGTCTTAAATTATGTGGA+GGG | 0.616289 | 6_1:+22282606 | None:intergenic |
| GGCGATAAGACGAAACAAGA+CGG | 0.617468 | 6_1:+22282137 | None:intergenic |
| AAAGCTTAAATGGAGAGGAG+AGG | 0.619636 | 6_1:-22278665 | Msa0879650:three_prime_UTR |
| ATAATTTAAGACAGTATCAG+AGG | 0.620762 | 6_1:-22282598 | Msa0879650:CDS |
| ATTATGCACACCTATTAGGA+AGG | 0.620818 | 6_1:-22282792 | Msa0879650:CDS |
| GTTTCTATCACAAAATGCAA+AGG | 0.621901 | 6_1:-22281282 | Msa0879650:CDS |
| TTTGAACGAAGATATTAAGG+AGG | 0.625382 | 6_1:-22280881 | Msa0879650:CDS |
| AATTGTGAAACTACTTCAGA+TGG | 0.626139 | 6_1:-22278755 | Msa0879650:CDS |
| ATAAAGTGAAGAAATCAGAA+AGG | 0.626505 | 6_1:-22282235 | Msa0879650:CDS |
| TCATGGCCTGTAATGGAACA+AGG | 0.631186 | 6_1:-22282019 | Msa0879650:CDS |
| GAAGACTACATTGCAGCAGG+TGG | 0.632505 | 6_1:-22280418 | Msa0879650:CDS |
| TTGTTTCTAGTGTCTGCTGG+AGG | 0.648602 | 6_1:-22278816 | Msa0879650:CDS |
| TACAGCAAGTTCGAAGAGCG+CGG | 0.652487 | 6_1:-22280508 | Msa0879650:CDS |
| ACTTAAGGCACATATCACAT+TGG | 0.655318 | 6_1:+22280453 | None:intergenic |
| ATGGACTCAACTTAAGAGCG+TGG | 0.658372 | 6_1:-22282274 | Msa0879650:CDS |
| TCAAATAGTAGTGATAACAA+TGG | 0.662592 | 6_1:-22278844 | Msa0879650:CDS |
| GAACACAGCATACATTTGCA+GGG | 0.663936 | 6_1:+22279739 | None:intergenic |
| TGTTTGACATCTCAACGACA+GGG | 0.664739 | 6_1:+22280329 | None:intergenic |
| TAGCTTCAAAGAGTTATCAG+TGG | 0.667175 | 6_1:+22279551 | None:intergenic |
| AAATCACTCAGATTAAGCAA+AGG | 0.669333 | 6_1:-22282518 | Msa0879650:CDS |
| AATCTGTTTAGGATCTGTGG+TGG | 0.669552 | 6_1:+22282682 | None:intergenic |
| AGACAATGTGATGTCTAGCG+CGG | 0.671840 | 6_1:-22282309 | Msa0879650:CDS |
| GACCAGGTAATGTACACCAA+GGG | 0.678899 | 6_1:+22279631 | None:intergenic |
| TGCTCCATGTATTGAGACAG+TGG | 0.687561 | 6_1:+22280075 | None:intergenic |
| TTGTCCAGAAGTGATCAATG+AGG | 0.688486 | 6_1:-22281742 | Msa0879650:CDS |
| TGACCAGGTAATGTACACCA+AGG | 0.691760 | 6_1:+22279630 | None:intergenic |
| GATGTATCGAATAGGAACAC+CGG | 0.705814 | 6_1:-22278334 | Msa0879650:three_prime_UTR |
| CTGTGGTTCAGAATCTAACG+AGG | 0.708727 | 6_1:-22279327 | Msa0879650:intron |
| ACAAGCATCAGATAACAACT+CGG | 0.717159 | 6_1:+22279503 | None:intergenic |
| CTGCAATGTAGTCTTCATCG+CGG | 0.756043 | 6_1:+22280425 | None:intergenic |
| CAAACTATGGAATATCAGCG+AGG | 0.779696 | 6_1:-22279974 | Msa0879650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTATTTAATTTTATTCAA+CGG | + | chr6_1:22279520-22279539 | None:intergenic | 10.0% |
| !! | TTGAATAAAATTAAATACAT+TGG | - | chr6_1:22279520-22279539 | Msa0879650:CDS | 10.0% |
| !!! | GTATATATTTAAACAGATTT+TGG | - | chr6_1:22279423-22279442 | Msa0879650:intron | 15.0% |
| !!! | TGAAACTTAACAAAATATTT+TGG | + | chr6_1:22280039-22280058 | None:intergenic | 15.0% |
| !!! | TATCTTTTTTTATGTATAAC+AGG | - | chr6_1:22280556-22280575 | Msa0879650:CDS | 15.0% |
| !!! | AAATCTTTTATTTTTTGGAT+CGG | - | chr6_1:22281936-22281955 | Msa0879650:CDS | 15.0% |
| !! | TTCTGAATTCAAGTATTTAT+TGG | - | chr6_1:22278332-22278351 | Msa0879650:three_prime_UTR | 20.0% |
| !! | AGGATAAAATAAAGAACATA+TGG | + | chr6_1:22278432-22278451 | None:intergenic | 20.0% |
| !! | AGATATCAGAAAATTTAGAA+AGG | + | chr6_1:22278452-22278471 | None:intergenic | 20.0% |
| !! | TGAATAGCATAAGATAAATT+TGG | + | chr6_1:22278547-22278566 | None:intergenic | 20.0% |
| !! | ATTGATCTAAATTTGATTGA+AGG | - | chr6_1:22278716-22278735 | Msa0879650:three_prime_UTR | 20.0% |
| !!! | TATAAAGCTTTTGCTAATAT+AGG | - | chr6_1:22279181-22279200 | Msa0879650:intron | 20.0% |
| !!! | ATTTAAACAGATTTTGGAAT+TGG | - | chr6_1:22279429-22279448 | Msa0879650:intron | 20.0% |
| !! | AGAAGAAAAACAGTTTATTT+CGG | - | chr6_1:22279837-22279856 | Msa0879650:intron | 20.0% |
| !! | TCACTAATTAAAATAACCAT+AGG | - | chr6_1:22280056-22280075 | Msa0879650:CDS | 20.0% |
| !! | ACAGGTTATGAATAATTATA+GGG | + | chr6_1:22280222-22280241 | None:intergenic | 20.0% |
| !! | AACAGGTTATGAATAATTAT+AGG | + | chr6_1:22280223-22280242 | None:intergenic | 20.0% |
| !!! | AGATCTACTAATAATTTTAC+TGG | + | chr6_1:22280856-22280875 | None:intergenic | 20.0% |
| !! | AACATTAATATTATGTGACA+TGG | - | chr6_1:22281501-22281520 | Msa0879650:intron | 20.0% |
| !!! | TCCACAAATCTTTTATTTTT+TGG | - | chr6_1:22281931-22281950 | Msa0879650:CDS | 20.0% |
| !! | TCCAAAAAATAAAAGATTTG+TGG | + | chr6_1:22281935-22281954 | None:intergenic | 20.0% |
| !! | TTATGAGAAACTAATTTCTT+CGG | + | chr6_1:22282448-22282467 | None:intergenic | 20.0% |
| !!! | TTAGTTTCTCATAATTTTTG+TGG | - | chr6_1:22282454-22282473 | Msa0879650:CDS | 20.0% |
| !!! | TTTTTCTTTTTATCACTCTA+TGG | - | chr6_1:22282481-22282500 | Msa0879650:CDS | 20.0% |
| !! | ATTATAAGCTCTTGTATTAT+TGG | - | chr6_1:22282584-22282603 | Msa0879650:CDS | 20.0% |
| !!! | GCATATTTTGTTCATATTTT+AGG | + | chr6_1:22283110-22283129 | None:intergenic | 20.0% |
| !! | AACTTTTCAACAATCTGTTT+AGG | + | chr6_1:22278965-22278984 | None:intergenic | 25.0% |
| ! | TTGTTGAAAAGTTACATGTT+AGG | - | chr6_1:22278972-22278991 | Msa0879650:intron | 25.0% |
| ! | TGATACTGTCTTAAATTATG+TGG | + | chr6_1:22279034-22279053 | None:intergenic | 25.0% |
| !! | ATAATTTAAGACAGTATCAG+AGG | - | chr6_1:22279035-22279054 | Msa0879650:intron | 25.0% |
| !! | TTTTGCTAATATAGGCAATA+TGG | - | chr6_1:22279189-22279208 | Msa0879650:intron | 25.0% |
| ! | ATAAAGTGAAGAAATCAGAA+AGG | - | chr6_1:22279398-22279417 | Msa0879650:intron | 25.0% |
| ! | CTTAAGACATGACTTAAATA+CGG | + | chr6_1:22279590-22279609 | None:intergenic | 25.0% |
| !!! | AAAATATTTTGGCTATCAAG+AGG | + | chr6_1:22280028-22280047 | None:intergenic | 25.0% |
| ! | CACAATTTAATCAAACCTTT+AGG | - | chr6_1:22280088-22280107 | Msa0879650:CDS | 25.0% |
| ! | GTATCAATTTCATTTCCTAA+AGG | + | chr6_1:22280106-22280125 | None:intergenic | 25.0% |
| !!! | TTACATGTTTTATTCCAACT+TGG | - | chr6_1:22280140-22280159 | Msa0879650:intron | 25.0% |
| ! | ATAGCATAATTAATCCAAGT+TGG | + | chr6_1:22280157-22280176 | None:intergenic | 25.0% |
| ! | CACTAAAATGTTAACAAAAC+AGG | + | chr6_1:22280240-22280259 | None:intergenic | 25.0% |
| !!! | CTGTTTTGTTAACATTTTAG+TGG | - | chr6_1:22280238-22280257 | Msa0879650:intron | 25.0% |
| ! | AATATTGATATTGATGTTCG+AGG | - | chr6_1:22280503-22280522 | Msa0879650:CDS | 25.0% |
| ! | TGAAGAAGAAAAGAAAAAAC+AGG | - | chr6_1:22280701-22280720 | Msa0879650:CDS | 25.0% |
| ! | TTGTTTGAACGAAGATATTA+AGG | - | chr6_1:22280749-22280768 | Msa0879650:CDS | 25.0% |
| !!! | ATTTAGAGAATGTTGGTAAT+GGG | - | chr6_1:22281033-22281052 | Msa0879650:CDS | 25.0% |
| ! | AATCACTTGAAATAGCATTA+AGG | + | chr6_1:22281268-22281287 | None:intergenic | 25.0% |
| ! | CAGTTATATAAAAAACCATC+TGG | - | chr6_1:22281355-22281374 | Msa0879650:CDS | 25.0% |
| ! | TTAATATTATGTGACATGGA+TGG | - | chr6_1:22281505-22281524 | Msa0879650:intron | 25.0% |
| ! | TTACAAAGCATAACTTACAA+TGG | - | chr6_1:22281706-22281725 | Msa0879650:CDS | 25.0% |
| ! | AAGAAATATAACTATGTGAC+AGG | - | chr6_1:22281767-22281786 | Msa0879650:CDS | 25.0% |
| !! | TTTTTGCAGAGAAATTCTAT+AGG | - | chr6_1:22281859-22281878 | Msa0879650:CDS | 25.0% |
| !! | ATATAATACATTAGTCTGTC+TGG | - | chr6_1:22282358-22282377 | Msa0879650:CDS | 25.0% |
| ! | TCAAATAGTAGTGATAACAA+TGG | - | chr6_1:22282789-22282808 | Msa0879650:CDS | 25.0% |
| !! | TGTGACATATGCATTTTATT+TGG | - | chr6_1:22282901-22282920 | Msa0879650:intron | 25.0% |
| ! | AATGACGAATAAAGCTTAAA+TGG | - | chr6_1:22282958-22282977 | Msa0879650:intron | 25.0% |
| ! | GAGTTTAAATTGTTTCAAAG+AGG | - | chr6_1:22282996-22283015 | Msa0879650:intron | 25.0% |
| !!! | TCTCTTTAGTTTTCATAGAT+AGG | - | chr6_1:22283031-22283050 | Msa0879650:intron | 25.0% |
| !!! | CTCTTTAAAATATCATCAAG+TGG | - | chr6_1:22283208-22283227 | Msa0879650:intron | 25.0% |
| ! | ATATATGTGATGTATCGAAT+AGG | - | chr6_1:22283291-22283310 | Msa0879650:five_prime_UTR | 25.0% |
| CAATGAACAAAGTAACTCTT+TGG | + | chr6_1:22278503-22278522 | None:intergenic | 30.0% | |
| ! | CAAAGAGTTACTTTGTTCAT+TGG | - | chr6_1:22278501-22278520 | Msa0879650:three_prime_UTR | 30.0% |
| ATGTTCATGCAATCATTTGA+AGG | - | chr6_1:22278616-22278635 | Msa0879650:three_prime_UTR | 30.0% | |
| ! | ATCACATTTTCCTTCCTAAT+AGG | + | chr6_1:22278854-22278873 | None:intergenic | 30.0% |
| ATTAGGAAGGAAAATGTGAT+TGG | - | chr6_1:22278854-22278873 | Msa0879650:CDS | 30.0% | |
| ACTGTCTTAAATTATGTGGA+GGG | + | chr6_1:22279030-22279049 | None:intergenic | 30.0% | |
| TACTGTCTTAAATTATGTGG+AGG | + | chr6_1:22279031-22279050 | None:intergenic | 30.0% | |
| AAATCACTCAGATTAAGCAA+AGG | - | chr6_1:22279115-22279134 | Msa0879650:intron | 30.0% | |
| AGATTAAGCAAAGGACAAAA+GGG | - | chr6_1:22279124-22279143 | Msa0879650:intron | 30.0% | |
| ! | AAAAGGGAATTGATTCTAGA+AGG | - | chr6_1:22279140-22279159 | Msa0879650:intron | 30.0% |
| TCTAGTTATCCTCAATTGTT+AGG | - | chr6_1:22279259-22279278 | Msa0879650:intron | 30.0% | |
| ! | ATACGGTGAAACATGATTTT+TGG | + | chr6_1:22279573-22279592 | None:intergenic | 30.0% |
| CGTATTTAAGTCATGTCTTA+AGG | - | chr6_1:22279588-22279607 | Msa0879650:CDS | 30.0% | |
| AAAAATGGACATGGAATCAA+GGG | - | chr6_1:22279762-22279781 | Msa0879650:CDS | 30.0% | |
| !! | AATCAAGGGTTGATAAAGAA+AGG | - | chr6_1:22279776-22279795 | Msa0879650:intron | 30.0% |
| TCATCAAATGTTTATAGCCT+TGG | - | chr6_1:22279928-22279947 | Msa0879650:intron | 30.0% | |
| ! | TTTTGTGATAGAAACTTTGG+CGG | + | chr6_1:22280346-22280365 | None:intergenic | 30.0% |
| ! | GCATTTTGTGATAGAAACTT+TGG | + | chr6_1:22280349-22280368 | None:intergenic | 30.0% |
| GTTTCTATCACAAAATGCAA+AGG | - | chr6_1:22280351-22280370 | Msa0879650:CDS | 30.0% | |
| ATAATGCTTTACCTGGTATT+GGG | + | chr6_1:22280424-22280443 | None:intergenic | 30.0% | |
| ATGCTATTATTCTGAATGTG+TGG | - | chr6_1:22280463-22280482 | Msa0879650:CDS | 30.0% | |
| ! | TCTGAATGTGTGGTTTTTAA+TGG | - | chr6_1:22280473-22280492 | Msa0879650:CDS | 30.0% |
| TGAATTTATACGCGAATTAG+AGG | - | chr6_1:22280593-22280612 | Msa0879650:CDS | 30.0% | |
| GAAAAAACAGGAAGCTAAAT+TGG | - | chr6_1:22280713-22280732 | Msa0879650:CDS | 30.0% | |
| TTTGAACGAAGATATTAAGG+AGG | - | chr6_1:22280752-22280771 | Msa0879650:CDS | 30.0% | |
| GTAGAAAGAAATCATTCGTA+TGG | - | chr6_1:22280774-22280793 | Msa0879650:CDS | 30.0% | |
| TTACTGGAAGAATCATGATA+AGG | + | chr6_1:22280840-22280859 | None:intergenic | 30.0% | |
| TTACCAACATTCTCTAAATG+AGG | + | chr6_1:22281032-22281051 | None:intergenic | 30.0% | |
| ! | CATTTAGAGAATGTTGGTAA+TGG | - | chr6_1:22281032-22281051 | Msa0879650:CDS | 30.0% |
| ATAGAACCTTGAATTCTCTT+TGG | + | chr6_1:22281059-22281078 | None:intergenic | 30.0% | |
| AAGAGAATTCAAGGTTCTAT+TGG | - | chr6_1:22281059-22281078 | Msa0879650:intron | 30.0% | |
| TTGCATATACCTTCATAGAA+AGG | + | chr6_1:22281095-22281114 | None:intergenic | 30.0% | |
| ATGATTGTTCTGTCAAACTA+TGG | - | chr6_1:22281646-22281665 | Msa0879650:intron | 30.0% | |
| !! | TGATAACTCTTTGAAGCTAT+GGG | - | chr6_1:22282086-22282105 | Msa0879650:CDS | 30.0% |
| !!! | TTTCGTTGGTTTATCTGTTT+TGG | - | chr6_1:22282270-22282289 | Msa0879650:CDS | 30.0% |
| !!! | CTCTATTTTTTCTACCTTTC+AGG | - | chr6_1:22282689-22282708 | Msa0879650:CDS | 30.0% |
| CTATTTGAATGACCAGAAAT+GGG | + | chr6_1:22282777-22282796 | None:intergenic | 30.0% | |
| ACTATTTGAATGACCAGAAA+TGG | + | chr6_1:22282778-22282797 | None:intergenic | 30.0% | |
| AATTGTGAAACTACTTCAGA+TGG | - | chr6_1:22282878-22282897 | Msa0879650:exon | 30.0% | |
| ! | AGCCTTTTGAATTTAATCAC+AGG | - | chr6_1:22283165-22283184 | Msa0879650:intron | 30.0% |
| CACCTGTGATTAAATTCAAA+AGG | + | chr6_1:22283170-22283189 | None:intergenic | 30.0% | |
| AACCAGAGAGTTATTGCTAT+TGG | + | chr6_1:22278406-22278425 | None:intergenic | 35.0% | |
| ATTGAAGGAACTGCATGAAT+TGG | - | chr6_1:22278731-22278750 | Msa0879650:exon | 35.0% | |
| TAAGACATGACTGCAAATAG+TGG | - | chr6_1:22278761-22278780 | Msa0879650:CDS | 35.0% | |
| AAGACATGACTGCAAATAGT+GGG | - | chr6_1:22278762-22278781 | Msa0879650:CDS | 35.0% | |
| ! | AAATCAATGACCCTTTTCCA+AGG | - | chr6_1:22278810-22278829 | Msa0879650:CDS | 35.0% |
| CTAATAGGTGTGCATAATCT+AGG | + | chr6_1:22278839-22278858 | None:intergenic | 35.0% | |
| CTAGATTATGCACACCTATT+AGG | - | chr6_1:22278837-22278856 | Msa0879650:CDS | 35.0% | |
| ATTATGCACACCTATTAGGA+AGG | - | chr6_1:22278841-22278860 | Msa0879650:CDS | 35.0% | |
| ! | AGAAATTTTGCTTCCTTAGC+TGG | - | chr6_1:22278899-22278918 | Msa0879650:CDS | 35.0% |
| ! | AACAATCTGTTTAGGATCTG+TGG | + | chr6_1:22278957-22278976 | None:intergenic | 35.0% |
| AAGAACTTGACTGTAGCTTT+AGG | - | chr6_1:22279001-22279020 | Msa0879650:intron | 35.0% | |
| CAGATTAAGCAAAGGACAAA+AGG | - | chr6_1:22279123-22279142 | Msa0879650:intron | 35.0% | |
| ! | GTTTTCTCTCCTAACAATTG+AGG | + | chr6_1:22279271-22279290 | None:intergenic | 35.0% |
| TTAGGAGAGAAAACAGTGAA+GGG | - | chr6_1:22279277-22279296 | Msa0879650:intron | 35.0% | |
| ! | TTGATTTTGCACACTCTCAA+GGG | - | chr6_1:22279452-22279471 | Msa0879650:intron | 35.0% |
| TTTGGTCATCAAACACATGT+TGG | + | chr6_1:22279555-22279574 | None:intergenic | 35.0% | |
| ! | CATTTTCCTTGTTCCATTAC+AGG | + | chr6_1:22279623-22279642 | None:intergenic | 35.0% |
| ! | GCTTCTTTGCACTCAAATTT+TGG | + | chr6_1:22279672-22279691 | None:intergenic | 35.0% |
| CATCACTTCAACTGTATTCA+TGG | - | chr6_1:22279730-22279749 | Msa0879650:CDS | 35.0% | |
| CAAAAATGGACATGGAATCA+AGG | - | chr6_1:22279761-22279780 | Msa0879650:CDS | 35.0% | |
| CAATTCAGTTTGAAGAGAAG+TGG | - | chr6_1:22279863-22279882 | Msa0879650:intron | 35.0% | |
| GAGGAAATTATGCAGGATAA+AGG | + | chr6_1:22280009-22280028 | None:intergenic | 35.0% | |
| CTATCAAGAGGAAATTATGC+AGG | + | chr6_1:22280016-22280035 | None:intergenic | 35.0% | |
| AATTGTGCATAACAGTCCTA+TGG | + | chr6_1:22280075-22280094 | None:intergenic | 35.0% | |
| CATAATGCTTTACCTGGTAT+TGG | + | chr6_1:22280425-22280444 | None:intergenic | 35.0% | |
| !! | GAATTAGAGGCATCAAATTC+TGG | - | chr6_1:22280606-22280625 | Msa0879650:CDS | 35.0% |
| !! | ACTTTTATCACTGCTTTTGG+CGG | + | chr6_1:22280985-22281004 | None:intergenic | 35.0% |
| ! | CACACTTTTATCACTGCTTT+TGG | + | chr6_1:22280988-22281007 | None:intergenic | 35.0% |
| ! | AAGCAGTGATAAAAGTGTGA+TGG | - | chr6_1:22280989-22281008 | Msa0879650:CDS | 35.0% |
| TTGCCTCATTTAGAGAATGT+TGG | - | chr6_1:22281026-22281045 | Msa0879650:CDS | 35.0% | |
| ACTTAAGGCACATATCACAT+TGG | + | chr6_1:22281183-22281202 | None:intergenic | 35.0% | |
| ! | ATCTACTGATTATGATGGTG+TGG | - | chr6_1:22281379-22281398 | Msa0879650:intron | 35.0% |
| ! | TTCCACTGGCAAACATTTTT+GGG | + | chr6_1:22281623-22281642 | None:intergenic | 35.0% |
| TTCGTAACACTAAAATCCCT+TGG | - | chr6_1:22281986-22282005 | Msa0879650:CDS | 35.0% | |
| TAGCTTCAAAGAGTTATCAG+TGG | + | chr6_1:22282085-22282104 | None:intergenic | 35.0% | |
| !! | CTGATAACTCTTTGAAGCTA+TGG | - | chr6_1:22282085-22282104 | Msa0879650:CDS | 35.0% |
| ACAAGCATCAGATAACAACT+CGG | + | chr6_1:22282133-22282152 | None:intergenic | 35.0% | |
| TGCTTGTGACTTAACCTTTA+AGG | - | chr6_1:22282146-22282165 | Msa0879650:CDS | 35.0% | |
| GCTTGTGACTTAACCTTTAA+GGG | - | chr6_1:22282147-22282166 | Msa0879650:CDS | 35.0% | |
| ! | ACCTTTAAGGGTCATAGTAA+TGG | - | chr6_1:22282159-22282178 | Msa0879650:CDS | 35.0% |
| TCCATTACTATGACCCTTAA+AGG | + | chr6_1:22282163-22282182 | None:intergenic | 35.0% | |
| ! | TAAGGGTCATAGTAATGGAA+AGG | - | chr6_1:22282164-22282183 | Msa0879650:CDS | 35.0% |
| TTTCTTCTCCAGAATTTCGT+TGG | - | chr6_1:22282256-22282275 | Msa0879650:CDS | 35.0% | |
| CAGATAAACCAACGAAATTC+TGG | + | chr6_1:22282267-22282286 | None:intergenic | 35.0% | |
| !! | GTTGGTTTATCTGTTTTGGA+TGG | - | chr6_1:22282274-22282293 | Msa0879650:CDS | 35.0% |
| ! | TTATCACTCTATGGCGTTTT+AGG | - | chr6_1:22282490-22282509 | Msa0879650:CDS | 35.0% |
| TTGAATTTGACATCAACCGT+GGG | - | chr6_1:22282630-22282649 | Msa0879650:CDS | 35.0% | |
| ! | ATGTGTATCTTTTGATCCCA+CGG | + | chr6_1:22282649-22282668 | None:intergenic | 35.0% |
| GTGATAACAGTAAACCTGAA+AGG | + | chr6_1:22282706-22282725 | None:intergenic | 35.0% | |
| TTTCACAATTCCAACTGAGT+TGG | + | chr6_1:22282868-22282887 | None:intergenic | 35.0% | |
| TTGAAGCCTGAATAAATCAC+TGG | + | chr6_1:22282933-22282952 | None:intergenic | 35.0% | |
| CGAATAAAGCTTAAATGGAG+AGG | - | chr6_1:22282963-22282982 | Msa0879650:intron | 35.0% | |
| TGCTTCATACATCTCTTGTT+CGG | + | chr6_1:22283132-22283151 | None:intergenic | 35.0% | |
| ! | GAGAGTTATTGCTATTGGAG+AGG | + | chr6_1:22278401-22278420 | None:intergenic | 40.0% |
| CTCCAATAGCAATAACTCTC+TGG | - | chr6_1:22278401-22278420 | Msa0879650:three_prime_UTR | 40.0% | |
| ATCTAGGTGACCTTGGAAAA+GGG | + | chr6_1:22278823-22278842 | None:intergenic | 40.0% | |
| AATCTAGGTGACCTTGGAAA+AGG | + | chr6_1:22278824-22278843 | None:intergenic | 40.0% | |
| !!! | GACCTCCTAGTACTAGTTTT+TGG | - | chr6_1:22278927-22278946 | Msa0879650:intron | 40.0% |
| GACCAAAAACTAGTACTAGG+AGG | + | chr6_1:22278932-22278951 | None:intergenic | 40.0% | |
| GTGGACCAAAAACTAGTACT+AGG | + | chr6_1:22278935-22278954 | None:intergenic | 40.0% | |
| ! | AATCTGTTTAGGATCTGTGG+TGG | + | chr6_1:22278954-22278973 | None:intergenic | 40.0% |
| GTTAGGAGAGAAAACAGTGA+AGG | - | chr6_1:22279276-22279295 | Msa0879650:intron | 40.0% | |
| AGAGAAAACAGTGAAGGGAA+AGG | - | chr6_1:22279282-22279301 | Msa0879650:intron | 40.0% | |
| GAGAAAACAGTGAAGGGAAA+GGG | - | chr6_1:22279283-22279302 | Msa0879650:intron | 40.0% | |
| !! | GTTGATTTTGCACACTCTCA+AGG | - | chr6_1:22279451-22279470 | Msa0879650:intron | 40.0% |
| ATGGAACAAGGAAAATGCCT+TGG | - | chr6_1:22279626-22279645 | Msa0879650:CDS | 40.0% | |
| TGGAACAAGGAAAATGCCTT+GGG | - | chr6_1:22279627-22279646 | Msa0879650:CDS | 40.0% | |
| !! | ACTCAAATTTTGGCATGCAC+AGG | + | chr6_1:22279662-22279681 | None:intergenic | 40.0% |
| TGAAGAGACAGCATCTCTTA+AGG | - | chr6_1:22279702-22279721 | Msa0879650:CDS | 40.0% | |
| TCATGGCTGTGACACAAAAA+TGG | - | chr6_1:22279747-22279766 | Msa0879650:CDS | 40.0% | |
| CTGTGACACAAAAATGGACA+TGG | - | chr6_1:22279753-22279772 | Msa0879650:CDS | 40.0% | |
| TTGTCCAGAAGTGATCAATG+AGG | - | chr6_1:22279891-22279910 | Msa0879650:intron | 40.0% | |
| GTTTCCTCATTGATCACTTC+TGG | + | chr6_1:22279898-22279917 | None:intergenic | 40.0% | |
| CCTCAAAAAGAAGAACTCCA+AGG | + | chr6_1:22279948-22279967 | None:intergenic | 40.0% | |
| ! | CCTTGGAGTTCTTCTTTTTG+AGG | - | chr6_1:22279945-22279964 | Msa0879650:intron | 40.0% |
| GCTGTGCAATATTGAGTCAT+TGG | - | chr6_1:22280276-22280295 | Msa0879650:CDS | 40.0% | |
| TCACAAAATGCAAAGGAAGC+TGG | - | chr6_1:22280358-22280377 | Msa0879650:CDS | 40.0% | |
| !!! | AGGAAGCTGGTTTTTGTCTA+TGG | - | chr6_1:22280371-22280390 | Msa0879650:CDS | 40.0% |
| AGATAGTTCGATTGTGACGA+TGG | + | chr6_1:22280816-22280835 | None:intergenic | 40.0% | |
| GCTTCATCAACACATGAACT+TGG | + | chr6_1:22280882-22280901 | None:intergenic | 40.0% | |
| TACTTCTCCATGAGATTCCA+AGG | - | chr6_1:22280939-22280958 | Msa0879650:CDS | 40.0% | |
| ! | AAAGTGTGATGGAAACCAGA+TGG | - | chr6_1:22281000-22281019 | Msa0879650:CDS | 40.0% |
| TAAATGAGGCAATCTCCATC+TGG | + | chr6_1:22281018-22281037 | None:intergenic | 40.0% | |
| AATGGGCCAAAGAGAATTCA+AGG | - | chr6_1:22281050-22281069 | Msa0879650:CDS | 40.0% | |
| ! | CAAGGTTCTATTGGTTGTCT+AGG | - | chr6_1:22281068-22281087 | Msa0879650:intron | 40.0% |
| ! | TGTCTAGGACCTTTCTATGA+AGG | - | chr6_1:22281083-22281102 | Msa0879650:intron | 40.0% |
| TTCATCGCGGTCAAAACTTA+AGG | + | chr6_1:22281198-22281217 | None:intergenic | 40.0% | |
| TGTTTGACATCTCAACGACA+GGG | + | chr6_1:22281307-22281326 | None:intergenic | 40.0% | |
| TTGTTTGACATCTCAACGAC+AGG | + | chr6_1:22281308-22281327 | None:intergenic | 40.0% | |
| CATAATCAGTAGATGCCAGA+TGG | + | chr6_1:22281373-22281392 | None:intergenic | 40.0% | |
| ! | CTGGCATCTACTGATTATGA+TGG | - | chr6_1:22281374-22281393 | Msa0879650:intron | 40.0% |
| ! | TGATTATGATGGTGTGGTTC+AGG | - | chr6_1:22281385-22281404 | Msa0879650:intron | 40.0% |
| !!! | ACTGGCAAACATTTTTGGGT+CGG | + | chr6_1:22281619-22281638 | None:intergenic | 40.0% |
| ! | CTTCCACTGGCAAACATTTT+TGG | + | chr6_1:22281624-22281643 | None:intergenic | 40.0% |
| AGAACAATCATCACTTCCAC+TGG | + | chr6_1:22281637-22281656 | None:intergenic | 40.0% | |
| CAAACTATGGAATATCAGCG+AGG | - | chr6_1:22281659-22281678 | Msa0879650:intron | 40.0% | |
| TACATTTGCAGGGCTCATTA+TGG | + | chr6_1:22281887-22281906 | None:intergenic | 40.0% | |
| GAACACAGCATACATTTGCA+GGG | + | chr6_1:22281897-22281916 | None:intergenic | 40.0% | |
| TGAACACAGCATACATTTGC+AGG | + | chr6_1:22281898-22281917 | None:intergenic | 40.0% | |
| TCGGCTGATTACAAAGTGTA+CGG | - | chr6_1:22281955-22281974 | Msa0879650:CDS | 40.0% | |
| ! | GGTCATAGTAATGGAAAGGT+TGG | - | chr6_1:22282168-22282187 | Msa0879650:CDS | 40.0% |
| GTTGAATTTGACATCAACCG+TGG | - | chr6_1:22282629-22282648 | Msa0879650:CDS | 40.0% | |
| TCGAATTTGTGAGAAGCCAT+TGG | + | chr6_1:22282744-22282763 | None:intergenic | 40.0% | |
| CTCAGACCAGTGATTTATTC+AGG | - | chr6_1:22282924-22282943 | Msa0879650:intron | 40.0% | |
| AAAGCTTAAATGGAGAGGAG+AGG | - | chr6_1:22282968-22282987 | Msa0879650:intron | 40.0% | |
| AAGCTTAAATGGAGAGGAGA+GGG | - | chr6_1:22282969-22282988 | Msa0879650:intron | 40.0% | |
| GATGTATCGAATAGGAACAC+CGG | - | chr6_1:22283299-22283318 | Msa0879650:five_prime_UTR | 40.0% | |
| ! | ATGACTGCAAATAGTGGGAG+AGG | - | chr6_1:22278767-22278786 | Msa0879650:CDS | 45.0% |
| ! | GAGGAACTGAAGAGCATAAG+AGG | - | chr6_1:22278786-22278805 | Msa0879650:CDS | 45.0% |
| GTGCATAATCTAGGTGACCT+TGG | + | chr6_1:22278830-22278849 | None:intergenic | 45.0% | |
| TTTGCTTCCTTAGCTGGATC+TGG | - | chr6_1:22278905-22278924 | Msa0879650:CDS | 45.0% | |
| AGACAATGTGATGTCTAGCG+CGG | - | chr6_1:22279324-22279343 | Msa0879650:intron | 45.0% | |
| !!! | AGCGCGGAATGTTTTAACGA+TGG | - | chr6_1:22279340-22279359 | Msa0879650:CDS | 45.0% |
| ATGGACTCAACTTAAGAGCG+TGG | - | chr6_1:22279359-22279378 | Msa0879650:CDS | 45.0% | |
| ACACTCTCAAGGGTTTGTCT+TGG | - | chr6_1:22279462-22279481 | Msa0879650:intron | 45.0% | |
| GGCGATAAGACGAAACAAGA+CGG | + | chr6_1:22279499-22279518 | None:intergenic | 45.0% | |
| GTCATGTCTTAAGGCCATCA+TGG | - | chr6_1:22279597-22279616 | Msa0879650:CDS | 45.0% | |
| TGTTCCATTACAGGCCATGA+TGG | + | chr6_1:22279614-22279633 | None:intergenic | 45.0% | |
| ! | TCATGGCCTGTAATGGAACA+AGG | - | chr6_1:22279614-22279633 | Msa0879650:CDS | 45.0% |
| AAAGAAAGGCTGTGCGTTGA+TGG | - | chr6_1:22279790-22279809 | Msa0879650:intron | 45.0% | |
| CAGCAGCATAATGCTTTACC+TGG | + | chr6_1:22280431-22280450 | None:intergenic | 45.0% | |
| CTGCAATGTAGTCTTCATCG+CGG | + | chr6_1:22281211-22281230 | None:intergenic | 45.0% | |
| GATGAAGACTACATTGCAGC+AGG | - | chr6_1:22281212-22281231 | Msa0879650:intron | 45.0% | |
| ! | ACATGGATGGACTCAGATGT+GGG | - | chr6_1:22281518-22281537 | Msa0879650:intron | 45.0% |
| TCAGCCACTGTCTCAATACA+TGG | - | chr6_1:22281554-22281573 | Msa0879650:intron | 45.0% | |
| TGCTCCATGTATTGAGACAG+TGG | + | chr6_1:22281561-22281580 | None:intergenic | 45.0% | |
| ! | TGGAGCATCAAAAGAGAGCT+TGG | - | chr6_1:22281574-22281593 | Msa0879650:intron | 45.0% |
| GACCCAAAAATGTTTGCCAG+TGG | - | chr6_1:22281618-22281637 | Msa0879650:intron | 45.0% | |
| ! | ATCCCTTGGTGTACATTACC+TGG | - | chr6_1:22282000-22282019 | Msa0879650:CDS | 45.0% |
| GACCAGGTAATGTACACCAA+GGG | + | chr6_1:22282005-22282024 | None:intergenic | 45.0% | |
| TGACCAGGTAATGTACACCA+AGG | + | chr6_1:22282006-22282025 | None:intergenic | 45.0% | |
| TGGTGTACATTACCTGGTCA+TGG | - | chr6_1:22282006-22282025 | Msa0879650:CDS | 45.0% | |
| CTAACAGCTTTACCATGACC+AGG | + | chr6_1:22282021-22282040 | None:intergenic | 45.0% | |
| TTGGATGGATACATTGCCTG+TGG | - | chr6_1:22282289-22282308 | Msa0879650:CDS | 45.0% | |
| CTCGTTAGATTCTGAACCAC+AGG | + | chr6_1:22282308-22282327 | None:intergenic | 45.0% | |
| CTGTGGTTCAGAATCTAACG+AGG | - | chr6_1:22282306-22282325 | Msa0879650:CDS | 45.0% | |
| ! | CATTAGTCTGTCTGGATCTC+TGG | - | chr6_1:22282366-22282385 | Msa0879650:CDS | 45.0% |
| !!! | ATTTATTTATTTATTTTAGT+TGG | - | chr6_1:22278642-22278661 | Msa0879650:three_prime_UTR | 5.0% |
| AAGGCCATCATGGCCTGTAA+TGG | - | chr6_1:22279607-22279626 | Msa0879650:CDS | 50.0% | |
| GCACAGGTATCTTGTTCCCA+AGG | + | chr6_1:22279646-22279665 | None:intergenic | 50.0% | |
| ! | CTGGTATTGGGACGAGAAGA+CGG | + | chr6_1:22280412-22280431 | None:intergenic | 50.0% |
| TACAGCAAGTTCGAAGAGCG+CGG | - | chr6_1:22281125-22281144 | Msa0879650:intron | 50.0% | |
| GAAGACTACATTGCAGCAGG+TGG | - | chr6_1:22281215-22281234 | Msa0879650:intron | 50.0% | |
| CAAAGCTCAGTTGTGTGTGC+TGG | - | chr6_1:22281330-22281349 | Msa0879650:CDS | 50.0% | |
| ! | GACATGGATGGACTCAGATG+TGG | - | chr6_1:22281517-22281536 | Msa0879650:intron | 50.0% |
| TGAGCTGATTGTGTCGTGAG+AGG | - | chr6_1:22282389-22282408 | Msa0879650:CDS | 50.0% | |
| TTCTTCGGCTAAATGCAGCG+CGG | + | chr6_1:22282433-22282452 | None:intergenic | 50.0% | |
| CAAATCTCTGCCAGTGCCAA+TGG | - | chr6_1:22282725-22282744 | Msa0879650:CDS | 50.0% | |
| TTGTGAGAAGCCATTGGCAC+TGG | + | chr6_1:22282738-22282757 | None:intergenic | 50.0% | |
| GAGTCAGTCGATCCCATTTC+TGG | - | chr6_1:22282762-22282781 | Msa0879650:CDS | 50.0% | |
| CTTGTTGCAGCCAACTCAGT+TGG | - | chr6_1:22282855-22282874 | Msa0879650:CDS | 50.0% | |
| AGGAGGTCCAGATCCAGCTA+AGG | + | chr6_1:22278915-22278934 | None:intergenic | 55.0% | |
| TGGGACGAGAAGACGGTTCA+GGG | + | chr6_1:22280405-22280424 | None:intergenic | 55.0% | |
| TTGGGACGAGAAGACGGTTC+AGG | + | chr6_1:22280406-22280425 | None:intergenic | 55.0% | |
| CGTCTTCTCGTCCCAATACC+AGG | - | chr6_1:22280410-22280429 | Msa0879650:CDS | 55.0% | |
| TGGACTCAGATGTGGGATGC+AGG | - | chr6_1:22281525-22281544 | Msa0879650:intron | 55.0% | |
| GAGCGGGCCTTGGAATCTCA+TGG | + | chr6_1:22280949-22280968 | None:intergenic | 60.0% | |
| GAGATTCCAAGGCCCGCTCA+AGG | - | chr6_1:22280950-22280969 | Msa0879650:CDS | 60.0% | |
| CAGATGTGGGATGCAGGCAC+TGG | - | chr6_1:22281531-22281550 | Msa0879650:intron | 60.0% | |
| CAGCTTCCTTGAGCGGGCCT+TGG | + | chr6_1:22280959-22280978 | None:intergenic | 65.0% | |
| CGGCTGCAGCTTCCTTGAGC+GGG | + | chr6_1:22280965-22280984 | None:intergenic | 65.0% | |
| GCGGCTGCAGCTTCCTTGAG+CGG | + | chr6_1:22280966-22280985 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 22278322 | 22283333 | 22278322 | ID=Msa0879650;Name=Msa0879650 |
| chr6_1 | mRNA | 22278322 | 22283333 | 22278322 | ID=Msa0879650-mRNA-1;Parent=Msa0879650;Name=Msa0879650-mRNA-1;_AED=0.06;_eAED=0.06;_QI=130|0.85|0.87|1|0.85|0.75|8|428|974 |
| chr6_1 | exon | 22278322 | 22278944 | 22278322 | ID=Msa0879650-mRNA-1:exon:6071;Parent=Msa0879650-mRNA-1 |
| chr6_1 | exon | 22279328 | 22279387 | 22279328 | ID=Msa0879650-mRNA-1:exon:6070;Parent=Msa0879650-mRNA-1 |
| chr6_1 | exon | 22279470 | 22279787 | 22279470 | ID=Msa0879650-mRNA-1:exon:6069;Parent=Msa0879650-mRNA-1 |
| chr6_1 | exon | 22279957 | 22280121 | 22279957 | ID=Msa0879650-mRNA-1:exon:6068;Parent=Msa0879650-mRNA-1 |
| chr6_1 | exon | 22280249 | 22281077 | 22280249 | ID=Msa0879650-mRNA-1:exon:6067;Parent=Msa0879650-mRNA-1 |
| chr6_1 | exon | 22281224 | 22281381 | 22281224 | ID=Msa0879650-mRNA-1:exon:6066;Parent=Msa0879650-mRNA-1 |
| chr6_1 | exon | 22281689 | 22282917 | 22281689 | ID=Msa0879650-mRNA-1:exon:6065;Parent=Msa0879650-mRNA-1 |
| chr6_1 | exon | 22283233 | 22283333 | 22283233 | ID=Msa0879650-mRNA-1:exon:6064;Parent=Msa0879650-mRNA-1 |
| chr6_1 | five_prime_UTR | 22283233 | 22283333 | 22283233 | ID=Msa0879650-mRNA-1:five_prime_utr;Parent=Msa0879650-mRNA-1 |
| chr6_1 | five_prime_UTR | 22282889 | 22282917 | 22282889 | ID=Msa0879650-mRNA-1:five_prime_utr;Parent=Msa0879650-mRNA-1 |
| chr6_1 | CDS | 22281689 | 22282888 | 22281689 | ID=Msa0879650-mRNA-1:cds;Parent=Msa0879650-mRNA-1 |
| chr6_1 | CDS | 22281224 | 22281381 | 22281224 | ID=Msa0879650-mRNA-1:cds;Parent=Msa0879650-mRNA-1 |
| chr6_1 | CDS | 22280249 | 22281077 | 22280249 | ID=Msa0879650-mRNA-1:cds;Parent=Msa0879650-mRNA-1 |
| chr6_1 | CDS | 22279957 | 22280121 | 22279957 | ID=Msa0879650-mRNA-1:cds;Parent=Msa0879650-mRNA-1 |
| chr6_1 | CDS | 22279470 | 22279787 | 22279470 | ID=Msa0879650-mRNA-1:cds;Parent=Msa0879650-mRNA-1 |
| chr6_1 | CDS | 22279328 | 22279387 | 22279328 | ID=Msa0879650-mRNA-1:cds;Parent=Msa0879650-mRNA-1 |
| chr6_1 | CDS | 22278750 | 22278944 | 22278750 | ID=Msa0879650-mRNA-1:cds;Parent=Msa0879650-mRNA-1 |
| chr6_1 | three_prime_UTR | 22278322 | 22278749 | 22278322 | ID=Msa0879650-mRNA-1:three_prime_utr;Parent=Msa0879650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
