Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196250 | RHN72450.1 | 75.000 | 424 | 91 | 9 | 1 | 419 | 1 | 414 | 0.0 | 570 |
| Msa0196250 | RHN72450.1 | 93.793 | 435 | 27 | 0 | 1 | 435 | 462 | 896 | 0.0 | 793 |
| Msa0196250 | RHN72450.1 | 95.672 | 439 | 19 | 0 | 1 | 439 | 924 | 1362 | 0.0 | 816 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196250 | sp|P0DO21|GIP2_NICBE | 41.505 | 412 | 209 | 8 | 30 | 423 | 37 | 434 | 3.24e-91 | 286 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196250 | A0A396J3I9 | 75.000 | 424 | 91 | 9 | 1 | 419 | 1 | 414 | 0.0 | 570 |
| Msa0196250 | A0A396J3I9 | 93.793 | 435 | 27 | 0 | 1 | 435 | 462 | 896 | 0.0 | 793 |
| Msa0196250 | A0A396J3I9 | 95.672 | 439 | 19 | 0 | 1 | 439 | 924 | 1362 | 0.0 | 816 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0075840 | Msa0196250 | 0.801098 | 1.056713e-48 | -8.615850e-47 |
| Msa0121320 | Msa0196250 | 0.805371 | 1.379014e-49 | -8.615850e-47 |
| Msa0166180 | Msa0196250 | 0.807089 | 5.991590e-50 | -8.615850e-47 |
| Msa0196250 | Msa0196260 | 0.867219 | 1.608485e-65 | -8.615850e-47 |
| Msa0196250 | Msa0238110 | 0.847222 | 1.325971e-59 | -8.615850e-47 |
| Msa0196250 | Msa0316020 | 0.805497 | 1.297654e-49 | -8.615850e-47 |
| Msa0196250 | Msa0715350 | 0.813841 | 2.086865e-51 | -8.615850e-47 |
| Msa0196250 | Msa0732970 | 0.810124 | 1.346993e-50 | -8.615850e-47 |
| Msa0196250 | Msa0761830 | 0.815883 | 7.359199e-52 | -8.615850e-47 |
| Msa0196250 | Msa0777070 | 0.801814 | 7.537490e-49 | -8.615850e-47 |
| Msa0196250 | Msa1024350 | 0.803395 | 3.557629e-49 | -8.615850e-47 |
| Msa0196250 | Msa1127880 | 0.802059 | 6.714948e-49 | -8.615850e-47 |
| Msa0196250 | Msa1165880 | 0.804720 | 1.886531e-49 | -8.615850e-47 |
| Msa0196250 | Msa1223620 | 0.803475 | 3.424501e-49 | -8.615850e-47 |
| Msa0196250 | Msa1263520 | 0.807510 | 4.880081e-50 | -8.615850e-47 |
| Msa0196250 | Msa1281370 | 0.811963 | 5.382308e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196250 | MtrunA17_Chr2g0287781 | 95.672 | 439 | 19 | 0 | 1 | 439 | 924 | 1362 | 0.0 | 816 |
| Msa0196250 | MtrunA17_Chr2g0287781 | 93.793 | 435 | 27 | 0 | 1 | 435 | 462 | 896 | 0.0 | 793 |
| Msa0196250 | MtrunA17_Chr2g0287781 | 75.000 | 424 | 91 | 9 | 1 | 419 | 1 | 414 | 0.0 | 570 |
| Msa0196250 | MtrunA17_Chr2g0287811 | 84.634 | 423 | 63 | 2 | 1 | 422 | 1 | 422 | 0.0 | 712 |
| Msa0196250 | MtrunA17_Chr2g0287841 | 55.774 | 407 | 158 | 9 | 25 | 420 | 53 | 448 | 2.65e-133 | 391 |
| Msa0196250 | MtrunA17_Chr2g0287861 | 56.049 | 405 | 156 | 9 | 25 | 418 | 29 | 422 | 6.60e-132 | 387 |
| Msa0196250 | MtrunA17_Chr4g0065581 | 50.711 | 422 | 173 | 12 | 27 | 421 | 37 | 450 | 1.77e-118 | 353 |
| Msa0196250 | MtrunA17_Chr1g0185661 | 43.736 | 439 | 207 | 12 | 13 | 426 | 661 | 1084 | 9.67e-91 | 296 |
| Msa0196250 | MtrunA17_Chr1g0185661 | 42.611 | 406 | 201 | 11 | 30 | 419 | 36 | 425 | 6.58e-81 | 270 |
| Msa0196250 | MtrunA17_Chr1g0185651 | 39.862 | 434 | 216 | 8 | 18 | 419 | 22 | 442 | 6.94e-87 | 272 |
| Msa0196250 | MtrunA17_Chr2g0287821 | 39.759 | 415 | 215 | 13 | 30 | 426 | 59 | 456 | 1.14e-77 | 248 |
| Msa0196250 | MtrunA17_Chr1g0187841 | 36.865 | 453 | 225 | 15 | 8 | 428 | 13 | 436 | 1.15e-68 | 224 |
| Msa0196250 | MtrunA17_Chr2g0287831 | 34.375 | 448 | 247 | 10 | 1 | 432 | 1 | 417 | 4.24e-56 | 191 |
| Msa0196250 | MtrunA17_Chr7g0273041 | 31.957 | 460 | 243 | 19 | 1 | 421 | 1 | 429 | 1.71e-52 | 182 |
| Msa0196250 | MtrunA17_Chr7g0239001 | 27.179 | 390 | 224 | 18 | 46 | 409 | 66 | 421 | 3.53e-19 | 89.4 |
| Msa0196250 | MtrunA17_Chr7g0267171 | 23.844 | 411 | 230 | 19 | 40 | 408 | 91 | 460 | 4.07e-17 | 83.2 |
| Msa0196250 | MtrunA17_Chr4g0056211 | 24.171 | 422 | 237 | 17 | 32 | 409 | 84 | 466 | 1.54e-16 | 81.6 |
| Msa0196250 | MtrunA17_Chr2g0291201 | 25.000 | 384 | 216 | 15 | 50 | 409 | 112 | 447 | 5.55e-16 | 79.7 |
| Msa0196250 | MtrunA17_Chr1g0210201 | 25.000 | 380 | 210 | 15 | 49 | 409 | 140 | 463 | 9.33e-14 | 73.2 |
| Msa0196250 | MtrunA17_Chr2g0307461 | 24.257 | 404 | 228 | 16 | 35 | 406 | 66 | 423 | 2.56e-13 | 71.6 |
| Msa0196250 | MtrunA17_Chr3g0112051 | 23.262 | 374 | 226 | 16 | 50 | 411 | 83 | 407 | 2.93e-13 | 71.2 |
| Msa0196250 | MtrunA17_Chr3g0095891 | 25.964 | 389 | 229 | 17 | 44 | 409 | 102 | 454 | 1.51e-12 | 69.3 |
| Msa0196250 | MtrunA17_Chr8g0390761 | 24.119 | 369 | 218 | 15 | 50 | 404 | 126 | 446 | 2.19e-12 | 68.6 |
| Msa0196250 | MtrunA17_Chr5g0442921 | 24.375 | 160 | 111 | 4 | 251 | 409 | 399 | 549 | 3.63e-12 | 68.2 |
| Msa0196250 | MtrunA17_Chr5g0399171 | 22.619 | 420 | 234 | 17 | 46 | 409 | 81 | 465 | 1.23e-11 | 66.2 |
| Msa0196250 | MtrunA17_Chr4g0001991 | 25.135 | 370 | 217 | 14 | 57 | 409 | 187 | 513 | 6.63e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0196250 | AT1G03220.1 | 40.858 | 443 | 227 | 11 | 1 | 423 | 1 | 428 | 4.02e-87 | 273 |
| Msa0196250 | AT1G03230.1 | 40.633 | 411 | 211 | 10 | 30 | 423 | 35 | 429 | 3.64e-83 | 262 |
| Msa0196250 | AT5G19110.1 | 36.364 | 429 | 224 | 14 | 9 | 420 | 3 | 399 | 5.72e-64 | 211 |
| Msa0196250 | AT5G19110.2 | 36.364 | 429 | 224 | 14 | 9 | 420 | 39 | 435 | 9.92e-64 | 212 |
| Msa0196250 | AT5G19100.1 | 34.491 | 403 | 211 | 12 | 25 | 420 | 28 | 384 | 2.30e-50 | 175 |
| Msa0196250 | AT5G48430.1 | 30.485 | 433 | 233 | 13 | 15 | 421 | 11 | 401 | 8.34e-40 | 147 |
| Msa0196250 | AT5G19120.1 | 29.469 | 414 | 234 | 14 | 4 | 408 | 11 | 375 | 3.72e-32 | 126 |
| Msa0196250 | AT2G39710.1 | 24.810 | 395 | 240 | 15 | 49 | 418 | 73 | 435 | 2.39e-21 | 96.3 |
| Msa0196250 | AT3G52500.1 | 23.628 | 419 | 226 | 18 | 40 | 409 | 90 | 463 | 4.26e-15 | 77.4 |
| Msa0196250 | AT3G25700.1 | 27.347 | 245 | 150 | 10 | 171 | 409 | 223 | 445 | 6.52e-14 | 73.9 |
| Msa0196250 | AT1G25510.1 | 25.199 | 377 | 215 | 14 | 49 | 410 | 156 | 480 | 2.06e-13 | 72.4 |
| Msa0196250 | AT2G42980.1 | 25.700 | 393 | 225 | 15 | 46 | 409 | 166 | 520 | 3.51e-12 | 68.6 |
| Msa0196250 | AT5G10770.1 | 24.615 | 390 | 203 | 17 | 50 | 409 | 141 | 469 | 1.47e-11 | 66.6 |
| Msa0196250 | AT3G59080.1 | 25.000 | 396 | 222 | 17 | 46 | 409 | 176 | 528 | 1.89e-11 | 66.2 |
| Msa0196250 | AT3G12700.1 | 25.686 | 401 | 233 | 18 | 34 | 411 | 100 | 458 | 4.17e-11 | 65.1 |
| Msa0196250 | AT1G01300.1 | 26.329 | 395 | 210 | 20 | 40 | 409 | 142 | 480 | 5.06e-11 | 65.1 |
| Msa0196250 | AT3G59080.2 | 24.731 | 372 | 217 | 14 | 46 | 409 | 176 | 492 | 5.48e-11 | 64.7 |
Find 79 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTGGTTTCTTCTAAATT+AGG | 0.215790 | 2_1:-13332224 | Msa0196250:CDS |
| CCTAGAACAGCTGTTGTTAT+TGG | 0.268001 | 2_1:-13332281 | Msa0196250:CDS |
| GAAGGGCTATTGTGAGAGTT+AGG | 0.270897 | 2_1:+13333392 | None:intergenic |
| AACTTATTAAGAAGTTTAAA+AGG | 0.284712 | 2_1:+13332848 | None:intergenic |
| GTGGAGAATAGATTGGTTAT+TGG | 0.288247 | 2_1:+13333319 | None:intergenic |
| CCAATAACAACAGCTGTTCT+AGG | 0.295187 | 2_1:+13332281 | None:intergenic |
| AAAACTAGTAAAGGCATATT+AGG | 0.297917 | 2_1:-13332917 | Msa0196250:CDS |
| GGAGCTGATGAAAGCTGTTT+TGG | 0.299919 | 2_1:+13332869 | None:intergenic |
| ATTGTAGGTTGAAGAGTTGT+AGG | 0.302927 | 2_1:+13333207 | None:intergenic |
| AGCATCATTAGTGCAAAGTT+TGG | 0.307458 | 2_1:+13333168 | None:intergenic |
| TCTAACAAGTGGTTTCAATA+TGG | 0.326395 | 2_1:+13332535 | None:intergenic |
| TGGAGAATAGATTGGTTATT+GGG | 0.334951 | 2_1:+13333320 | None:intergenic |
| CATTGTATTGGAGTTTGATT+TGG | 0.347534 | 2_1:-13332240 | Msa0196250:CDS |
| GCATCACCTTCGGTAAATAT+TGG | 0.361876 | 2_1:+13332704 | None:intergenic |
| ATCTATTCTCCACTTTACTT+TGG | 0.363101 | 2_1:-13333309 | Msa0196250:CDS |
| GCATGTCTTGGATTGGTAGA+TGG | 0.373379 | 2_1:-13332314 | Msa0196250:CDS |
| ACCATTTCCCTTATTGTCAA+TGG | 0.379619 | 2_1:+13332604 | None:intergenic |
| CCTTATTGTCAATGGACAAA+AGG | 0.380235 | 2_1:+13332612 | None:intergenic |
| TCTATTCTCCACTTTACTTT+GGG | 0.380236 | 2_1:-13333308 | Msa0196250:CDS |
| TCCATTGACAATAAGGGAAA+TGG | 0.400682 | 2_1:-13332605 | Msa0196250:CDS |
| AAGGGCTATTGTGAGAGTTA+GGG | 0.415800 | 2_1:+13333393 | None:intergenic |
| AAGTTTGGATTCACAAGAGA+TGG | 0.448655 | 2_1:+13333183 | None:intergenic |
| CCAGTTGGAGGACATTGTAT+TGG | 0.451363 | 2_1:-13332252 | Msa0196250:CDS |
| CTAAAGGGGTTAATAATAAG+AGG | 0.451517 | 2_1:+13332734 | None:intergenic |
| ACTATTGGTAGGACTAATAC+TGG | 0.451925 | 2_1:-13332431 | Msa0196250:CDS |
| CTTATTGTCAATGGACAAAA+GGG | 0.453185 | 2_1:+13332613 | None:intergenic |
| AAAGTCTCTGACTTTATCTC+TGG | 0.458442 | 2_1:-13333004 | Msa0196250:CDS |
| GGATGTACCAACCATTGGTT+TGG | 0.461363 | 2_1:-13332405 | Msa0196250:CDS |
| AATATTGGAGCAGTGCTAAA+GGG | 0.461586 | 2_1:+13332719 | None:intergenic |
| TTCACAAGAGATGGGATTGT+AGG | 0.463458 | 2_1:+13333192 | None:intergenic |
| TGCAATGGCCCTTTCAAACC+AGG | 0.466930 | 2_1:-13333133 | Msa0196250:CDS |
| AAATCAAAACATGTTTCAAA+TGG | 0.467677 | 2_1:+13332458 | None:intergenic |
| AATAGTAGTGAGTTGAAACT+TGG | 0.478635 | 2_1:+13332757 | None:intergenic |
| AGAACAGCTGTTGTTATTGG+TGG | 0.483483 | 2_1:-13332278 | Msa0196250:CDS |
| TTTGAGCAACCTGGTTTGAA+AGG | 0.494581 | 2_1:+13333124 | None:intergenic |
| CCAATACAATGTCCTCCAAC+TGG | 0.495268 | 2_1:+13332252 | None:intergenic |
| GGATTGGATGTACCAACCAT+TGG | 0.496897 | 2_1:-13332410 | Msa0196250:CDS |
| CATGTATTGTTTGAGCAACC+TGG | 0.499224 | 2_1:+13333115 | None:intergenic |
| TGGTGGAAATTCTATGGTGT+TGG | 0.501220 | 2_1:-13332351 | Msa0196250:CDS |
| TTGCAGTCATACCATAGGAT+TGG | 0.501466 | 2_1:+13333235 | None:intergenic |
| AAATATTGGAGCAGTGCTAA+AGG | 0.506396 | 2_1:+13332718 | None:intergenic |
| CTACCAAGTTGGTTTGAAGA+TGG | 0.508156 | 2_1:+13332812 | None:intergenic |
| AAACTTTGCACTAATGATGC+TGG | 0.509280 | 2_1:-13333166 | Msa0196250:CDS |
| TTGAGCAACCTGGTTTGAAA+GGG | 0.516540 | 2_1:+13333125 | None:intergenic |
| TGTTCCTACCCAAAGTAAAG+TGG | 0.518880 | 2_1:+13333300 | None:intergenic |
| ATTGGTTTGGTGCTAGAAAG+AGG | 0.520273 | 2_1:-13332392 | Msa0196250:CDS |
| GATGTGAAATCAATTAAAGT+TGG | 0.521003 | 2_1:-13332662 | Msa0196250:CDS |
| TTCATAAGAAGCATCACCTT+CGG | 0.531554 | 2_1:+13332694 | None:intergenic |
| TTGATTTGAGCACTATTGGT+AGG | 0.533247 | 2_1:-13332442 | Msa0196250:CDS |
| CTTACTCACTGAGTTAGAGT+TGG | 0.533297 | 2_1:+13332163 | None:intergenic |
| ACAAAATTGAATTCATGTGT+AGG | 0.537540 | 2_1:+13333274 | None:intergenic |
| CAATGAAAAGACTACCAAGT+TGG | 0.538008 | 2_1:+13332801 | None:intergenic |
| TTATTAAAATCTCTAACAAG+TGG | 0.539505 | 2_1:+13332524 | None:intergenic |
| AGTTTGGATTCACAAGAGAT+GGG | 0.539935 | 2_1:+13333184 | None:intergenic |
| TGGTAGGACTAATACTGGAT+TGG | 0.543488 | 2_1:-13332426 | Msa0196250:CDS |
| ATGAGCATGAAAATGAAAGA+AGG | 0.557773 | 2_1:+13333374 | None:intergenic |
| AAGTAAAGTGGAGAATAGAT+TGG | 0.558948 | 2_1:+13333312 | None:intergenic |
| GCTGGATGCACTAGCTGCAA+TGG | 0.559285 | 2_1:-13333148 | Msa0196250:CDS |
| AATTAAGAAAGTGGCATCAG+TGG | 0.565784 | 2_1:-13332483 | Msa0196250:CDS |
| CTCTAACTCAGTGAGTAAGA+TGG | 0.566440 | 2_1:-13332159 | Msa0196250:CDS |
| AAATGTTGCATGTCTTGGAT+TGG | 0.566777 | 2_1:-13332321 | Msa0196250:CDS |
| ATATTGGAGGACCAATCCTA+TGG | 0.571849 | 2_1:-13333246 | Msa0196250:CDS |
| ATGAAAGGGGTGTTCTTGCA+AGG | 0.575810 | 2_1:+13332894 | None:intergenic |
| TCTTTCTAGCACCAAACCAA+TGG | 0.578131 | 2_1:+13332394 | None:intergenic |
| ATTGACAATAAGGGAAATGG+TGG | 0.586403 | 2_1:-13332602 | Msa0196250:CDS |
| GTGAAATCAATTAAAGTTGG+TGG | 0.587363 | 2_1:-13332659 | Msa0196250:CDS |
| TGTTATTGGTGGACACCAGT+TGG | 0.590269 | 2_1:-13332267 | Msa0196250:CDS |
| TTACCATCTTCAAACCAACT+TGG | 0.596389 | 2_1:-13332815 | Msa0196250:CDS |
| TCTAGCACCAAACCAATGGT+TGG | 0.602176 | 2_1:+13332398 | None:intergenic |
| TATTGGTGGACACCAGTTGG+AGG | 0.602794 | 2_1:-13332264 | Msa0196250:CDS |
| TGAGCATGAAAATGAAAGAA+GGG | 0.606441 | 2_1:+13333375 | None:intergenic |
| TTCTCCACTTTACTTTGGGT+AGG | 0.615543 | 2_1:-13333304 | Msa0196250:CDS |
| ATATTGGAGCAGTGCTAAAG+GGG | 0.623612 | 2_1:+13332720 | None:intergenic |
| GGAACTATGTAACACAGTGA+AGG | 0.644211 | 2_1:+13332556 | None:intergenic |
| TGCTAGAAAGAGGTGTGGAG+TGG | 0.655682 | 2_1:-13332382 | Msa0196250:CDS |
| TTTGGTGCTAGAAAGAGGTG+TGG | 0.660056 | 2_1:-13332387 | Msa0196250:CDS |
| ACTGCTCCAATATTTACCGA+AGG | 0.681995 | 2_1:-13332710 | Msa0196250:CDS |
| GGTTGCTCAAACAATACATG+TGG | 0.693176 | 2_1:-13333112 | Msa0196250:CDS |
| TGTCTTGGATTGGTAGATGG+TGG | 0.721528 | 2_1:-13332311 | Msa0196250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTTATTAAGAAGTTTAAA+AGG | + | chr2_1:13332700-13332719 | None:intergenic | 15.0% |
| !! | TGATAAAAAAATTAAGAAAG+TGG | - | chr2_1:13333053-13333072 | Msa0196250:CDS | 15.0% |
| !! | AACTTATTAAGAAGTTTAAA+AGG | + | chr2_1:13332700-13332719 | None:intergenic | 15.0% |
| !! | TGATAAAAAAATTAAGAAAG+TGG | - | chr2_1:13333053-13333072 | Msa0196250:CDS | 15.0% |
| !!! | TTCAATTTTGTGATTGATAT+TGG | - | chr2_1:13332283-13332302 | Msa0196250:CDS | 20.0% |
| !! | TTATTAAAATCTCTAACAAG+TGG | + | chr2_1:13333024-13333043 | None:intergenic | 20.0% |
| !!! | TGTTAGAGATTTTAATAAGA+AGG | - | chr2_1:13333026-13333045 | Msa0196250:CDS | 20.0% |
| !! | AAATCAAAACATGTTTCAAA+TGG | + | chr2_1:13333090-13333109 | None:intergenic | 20.0% |
| !!! | TTCAATTTTGTGATTGATAT+TGG | - | chr2_1:13332283-13332302 | Msa0196250:CDS | 20.0% |
| !! | TTATTAAAATCTCTAACAAG+TGG | + | chr2_1:13333024-13333043 | None:intergenic | 20.0% |
| !!! | TGTTAGAGATTTTAATAAGA+AGG | - | chr2_1:13333026-13333045 | Msa0196250:CDS | 20.0% |
| !! | AAATCAAAACATGTTTCAAA+TGG | + | chr2_1:13333090-13333109 | None:intergenic | 20.0% |
| ! | ACAAAATTGAATTCATGTGT+AGG | + | chr2_1:13332274-13332293 | None:intergenic | 25.0% |
| !! | AATTTTGTGATTGATATTGG+AGG | - | chr2_1:13332286-13332305 | Msa0196250:CDS | 25.0% |
| ! | GAAAAAATAGCATCAACTAA+TGG | + | chr2_1:13332475-13332494 | None:intergenic | 25.0% |
| !!! | TTAGTTGATGCTATTTTTTC+AGG | - | chr2_1:13332475-13332494 | Msa0196250:CDS | 25.0% |
| !!! | GAGACTTTGATTTTAGATTT+TGG | + | chr2_1:13332529-13332548 | None:intergenic | 25.0% |
| !!! | AATATGCCTTTACTAGTTTT+TGG | + | chr2_1:13332628-13332647 | None:intergenic | 25.0% |
| !! | AAAACTAGTAAAGGCATATT+AGG | - | chr2_1:13332628-13332647 | Msa0196250:CDS | 25.0% |
| ! | GATGTGAAATCAATTAAAGT+TGG | - | chr2_1:13332883-13332902 | Msa0196250:CDS | 25.0% |
| !!! | AATTTTTGGTGGAAATTCTA+TGG | - | chr2_1:13333188-13333207 | Msa0196250:CDS | 25.0% |
| ! | AATAAAAATGTTGCATGTCT+TGG | - | chr2_1:13333219-13333238 | Msa0196250:CDS | 25.0% |
| !! | GATTTGGTTTCTTCTAAATT+AGG | - | chr2_1:13333321-13333340 | Msa0196250:CDS | 25.0% |
| ! | ACAAAATTGAATTCATGTGT+AGG | + | chr2_1:13332274-13332293 | None:intergenic | 25.0% |
| !! | AATTTTGTGATTGATATTGG+AGG | - | chr2_1:13332286-13332305 | Msa0196250:CDS | 25.0% |
| ! | GAAAAAATAGCATCAACTAA+TGG | + | chr2_1:13332475-13332494 | None:intergenic | 25.0% |
| !!! | TTAGTTGATGCTATTTTTTC+AGG | - | chr2_1:13332475-13332494 | Msa0196250:CDS | 25.0% |
| !!! | GAGACTTTGATTTTAGATTT+TGG | + | chr2_1:13332529-13332548 | None:intergenic | 25.0% |
| !!! | AATATGCCTTTACTAGTTTT+TGG | + | chr2_1:13332628-13332647 | None:intergenic | 25.0% |
| !! | AAAACTAGTAAAGGCATATT+AGG | - | chr2_1:13332628-13332647 | Msa0196250:CDS | 25.0% |
| ! | GATGTGAAATCAATTAAAGT+TGG | - | chr2_1:13332883-13332902 | Msa0196250:CDS | 25.0% |
| !!! | AATTTTTGGTGGAAATTCTA+TGG | - | chr2_1:13333188-13333207 | Msa0196250:CDS | 25.0% |
| ! | AATAAAAATGTTGCATGTCT+TGG | - | chr2_1:13333219-13333238 | Msa0196250:CDS | 25.0% |
| !! | GATTTGGTTTCTTCTAAATT+AGG | - | chr2_1:13333321-13333340 | Msa0196250:CDS | 25.0% |
| TGAGCATGAAAATGAAAGAA+GGG | + | chr2_1:13332173-13332192 | None:intergenic | 30.0% | |
| ATGAGCATGAAAATGAAAGA+AGG | + | chr2_1:13332174-13332193 | None:intergenic | 30.0% | |
| ! | TGGAGAATAGATTGGTTATT+GGG | + | chr2_1:13332228-13332247 | None:intergenic | 30.0% |
| AAGTAAAGTGGAGAATAGAT+TGG | + | chr2_1:13332236-13332255 | None:intergenic | 30.0% | |
| ATCTATTCTCCACTTTACTT+TGG | - | chr2_1:13332236-13332255 | Msa0196250:CDS | 30.0% | |
| TCTATTCTCCACTTTACTTT+GGG | - | chr2_1:13332237-13332256 | Msa0196250:CDS | 30.0% | |
| AACTTGCCAAAAACTAGTAA+AGG | - | chr2_1:13332619-13332638 | Msa0196250:CDS | 30.0% | |
| !!! | AAGCTGTTTTGGTAATGAAA+GGG | + | chr2_1:13332668-13332687 | None:intergenic | 30.0% |
| !!! | AAAGCTGTTTTGGTAATGAA+AGG | + | chr2_1:13332669-13332688 | None:intergenic | 30.0% |
| ! | AATAGTAGTGAGTTGAAACT+TGG | + | chr2_1:13332791-13332810 | None:intergenic | 30.0% |
| CTAAAGGGGTTAATAATAAG+AGG | + | chr2_1:13332814-13332833 | None:intergenic | 30.0% | |
| GTGAAATCAATTAAAGTTGG+TGG | - | chr2_1:13332886-13332905 | Msa0196250:CDS | 30.0% | |
| CTTATTGTCAATGGACAAAA+GGG | + | chr2_1:13332935-13332954 | None:intergenic | 30.0% | |
| ! | CTTTTGTCCATTGACAATAA+GGG | - | chr2_1:13332934-13332953 | Msa0196250:CDS | 30.0% |
| TCTAACAAGTGGTTTCAATA+TGG | + | chr2_1:13333013-13333032 | None:intergenic | 30.0% | |
| !!! | TGTTTTGATTTGAGCACTAT+TGG | - | chr2_1:13333099-13333118 | Msa0196250:CDS | 30.0% |
| CATTGTATTGGAGTTTGATT+TGG | - | chr2_1:13333305-13333324 | Msa0196250:CDS | 30.0% | |
| TGAGCATGAAAATGAAAGAA+GGG | + | chr2_1:13332173-13332192 | None:intergenic | 30.0% | |
| ATGAGCATGAAAATGAAAGA+AGG | + | chr2_1:13332174-13332193 | None:intergenic | 30.0% | |
| ! | TGGAGAATAGATTGGTTATT+GGG | + | chr2_1:13332228-13332247 | None:intergenic | 30.0% |
| AAGTAAAGTGGAGAATAGAT+TGG | + | chr2_1:13332236-13332255 | None:intergenic | 30.0% | |
| ATCTATTCTCCACTTTACTT+TGG | - | chr2_1:13332236-13332255 | Msa0196250:CDS | 30.0% | |
| TCTATTCTCCACTTTACTTT+GGG | - | chr2_1:13332237-13332256 | Msa0196250:CDS | 30.0% | |
| AACTTGCCAAAAACTAGTAA+AGG | - | chr2_1:13332619-13332638 | Msa0196250:CDS | 30.0% | |
| !!! | AAGCTGTTTTGGTAATGAAA+GGG | + | chr2_1:13332668-13332687 | None:intergenic | 30.0% |
| !!! | AAAGCTGTTTTGGTAATGAA+AGG | + | chr2_1:13332669-13332688 | None:intergenic | 30.0% |
| ! | AATAGTAGTGAGTTGAAACT+TGG | + | chr2_1:13332791-13332810 | None:intergenic | 30.0% |
| CTAAAGGGGTTAATAATAAG+AGG | + | chr2_1:13332814-13332833 | None:intergenic | 30.0% | |
| GTGAAATCAATTAAAGTTGG+TGG | - | chr2_1:13332886-13332905 | Msa0196250:CDS | 30.0% | |
| CTTATTGTCAATGGACAAAA+GGG | + | chr2_1:13332935-13332954 | None:intergenic | 30.0% | |
| ! | CTTTTGTCCATTGACAATAA+GGG | - | chr2_1:13332934-13332953 | Msa0196250:CDS | 30.0% |
| TCTAACAAGTGGTTTCAATA+TGG | + | chr2_1:13333013-13333032 | None:intergenic | 30.0% | |
| !!! | TGTTTTGATTTGAGCACTAT+TGG | - | chr2_1:13333099-13333118 | Msa0196250:CDS | 30.0% |
| CATTGTATTGGAGTTTGATT+TGG | - | chr2_1:13333305-13333324 | Msa0196250:CDS | 30.0% | |
| !!! | GTTATTGGGTCTTTTTCAAC+TGG | + | chr2_1:13332214-13332233 | None:intergenic | 35.0% |
| ! | GTGGAGAATAGATTGGTTAT+TGG | + | chr2_1:13332229-13332248 | None:intergenic | 35.0% |
| ! | TTTTGTTGCAGTCATACCAT+AGG | + | chr2_1:13332318-13332337 | None:intergenic | 35.0% |
| ! | ATTGTAGGTTGAAGAGTTGT+AGG | + | chr2_1:13332341-13332360 | None:intergenic | 35.0% |
| AGTTTGGATTCACAAGAGAT+GGG | + | chr2_1:13332364-13332383 | None:intergenic | 35.0% | |
| AAGTTTGGATTCACAAGAGA+TGG | + | chr2_1:13332365-13332384 | None:intergenic | 35.0% | |
| AGCATCATTAGTGCAAAGTT+TGG | + | chr2_1:13332380-13332399 | None:intergenic | 35.0% | |
| AAACTTTGCACTAATGATGC+TGG | - | chr2_1:13332379-13332398 | Msa0196250:CDS | 35.0% | |
| AAAGTCTCTGACTTTATCTC+TGG | - | chr2_1:13332541-13332560 | Msa0196250:CDS | 35.0% | |
| !!! | GTTTTTGGCAAGTTTTTGAG+AGG | + | chr2_1:13332613-13332632 | None:intergenic | 35.0% |
| !!! | AGCTGTTTTGGTAATGAAAG+GGG | + | chr2_1:13332667-13332686 | None:intergenic | 35.0% |
| TTACCATCTTCAAACCAACT+TGG | - | chr2_1:13332730-13332749 | Msa0196250:CDS | 35.0% | |
| CAATGAAAAGACTACCAAGT+TGG | + | chr2_1:13332747-13332766 | None:intergenic | 35.0% | |
| !! | CAACTTGGTAGTCTTTTCAT+TGG | - | chr2_1:13332745-13332764 | Msa0196250:CDS | 35.0% |
| !! | TTGGTAGTCTTTTCATTGGT+GGG | - | chr2_1:13332749-13332768 | Msa0196250:CDS | 35.0% |
| AATATTGGAGCAGTGCTAAA+GGG | + | chr2_1:13332829-13332848 | None:intergenic | 35.0% | |
| AAATATTGGAGCAGTGCTAA+AGG | + | chr2_1:13332830-13332849 | None:intergenic | 35.0% | |
| !! | TTCATAAGAAGCATCACCTT+CGG | + | chr2_1:13332854-13332873 | None:intergenic | 35.0% |
| CCTTATTGTCAATGGACAAA+AGG | + | chr2_1:13332936-13332955 | None:intergenic | 35.0% | |
| ! | CCTTTTGTCCATTGACAATA+AGG | - | chr2_1:13332933-13332952 | Msa0196250:CDS | 35.0% |
| TCCATTGACAATAAGGGAAA+TGG | - | chr2_1:13332940-13332959 | Msa0196250:CDS | 35.0% | |
| ACCATTTCCCTTATTGTCAA+TGG | + | chr2_1:13332944-13332963 | None:intergenic | 35.0% | |
| ATTGACAATAAGGGAAATGG+TGG | - | chr2_1:13332943-13332962 | Msa0196250:CDS | 35.0% | |
| AATTAAGAAAGTGGCATCAG+TGG | - | chr2_1:13333062-13333081 | Msa0196250:CDS | 35.0% | |
| ! | TTGATTTGAGCACTATTGGT+AGG | - | chr2_1:13333103-13333122 | Msa0196250:CDS | 35.0% |
| ACTATTGGTAGGACTAATAC+TGG | - | chr2_1:13333114-13333133 | Msa0196250:CDS | 35.0% | |
| AAATGTTGCATGTCTTGGAT+TGG | - | chr2_1:13333224-13333243 | Msa0196250:CDS | 35.0% | |
| !! | ACTTGCATTTTGAAGGAGAA+GGG | + | chr2_1:13333358-13333377 | None:intergenic | 35.0% |
| !! | AACTTGCATTTTGAAGGAGA+AGG | + | chr2_1:13333359-13333378 | None:intergenic | 35.0% |
| ! | TGGAACAACTTGCATTTTGA+AGG | + | chr2_1:13333365-13333384 | None:intergenic | 35.0% |
| !!! | GTTATTGGGTCTTTTTCAAC+TGG | + | chr2_1:13332214-13332233 | None:intergenic | 35.0% |
| ! | GTGGAGAATAGATTGGTTAT+TGG | + | chr2_1:13332229-13332248 | None:intergenic | 35.0% |
| ! | TTTTGTTGCAGTCATACCAT+AGG | + | chr2_1:13332318-13332337 | None:intergenic | 35.0% |
| ! | ATTGTAGGTTGAAGAGTTGT+AGG | + | chr2_1:13332341-13332360 | None:intergenic | 35.0% |
| AGTTTGGATTCACAAGAGAT+GGG | + | chr2_1:13332364-13332383 | None:intergenic | 35.0% | |
| AAGTTTGGATTCACAAGAGA+TGG | + | chr2_1:13332365-13332384 | None:intergenic | 35.0% | |
| AGCATCATTAGTGCAAAGTT+TGG | + | chr2_1:13332380-13332399 | None:intergenic | 35.0% | |
| AAACTTTGCACTAATGATGC+TGG | - | chr2_1:13332379-13332398 | Msa0196250:CDS | 35.0% | |
| AAAGTCTCTGACTTTATCTC+TGG | - | chr2_1:13332541-13332560 | Msa0196250:CDS | 35.0% | |
| !!! | GTTTTTGGCAAGTTTTTGAG+AGG | + | chr2_1:13332613-13332632 | None:intergenic | 35.0% |
| !!! | AGCTGTTTTGGTAATGAAAG+GGG | + | chr2_1:13332667-13332686 | None:intergenic | 35.0% |
| TTACCATCTTCAAACCAACT+TGG | - | chr2_1:13332730-13332749 | Msa0196250:CDS | 35.0% | |
| CAATGAAAAGACTACCAAGT+TGG | + | chr2_1:13332747-13332766 | None:intergenic | 35.0% | |
| !! | CAACTTGGTAGTCTTTTCAT+TGG | - | chr2_1:13332745-13332764 | Msa0196250:CDS | 35.0% |
| !! | TTGGTAGTCTTTTCATTGGT+GGG | - | chr2_1:13332749-13332768 | Msa0196250:CDS | 35.0% |
| AATATTGGAGCAGTGCTAAA+GGG | + | chr2_1:13332829-13332848 | None:intergenic | 35.0% | |
| AAATATTGGAGCAGTGCTAA+AGG | + | chr2_1:13332830-13332849 | None:intergenic | 35.0% | |
| !! | TTCATAAGAAGCATCACCTT+CGG | + | chr2_1:13332854-13332873 | None:intergenic | 35.0% |
| CCTTATTGTCAATGGACAAA+AGG | + | chr2_1:13332936-13332955 | None:intergenic | 35.0% | |
| ! | CCTTTTGTCCATTGACAATA+AGG | - | chr2_1:13332933-13332952 | Msa0196250:CDS | 35.0% |
| TCCATTGACAATAAGGGAAA+TGG | - | chr2_1:13332940-13332959 | Msa0196250:CDS | 35.0% | |
| ACCATTTCCCTTATTGTCAA+TGG | + | chr2_1:13332944-13332963 | None:intergenic | 35.0% | |
| ATTGACAATAAGGGAAATGG+TGG | - | chr2_1:13332943-13332962 | Msa0196250:CDS | 35.0% | |
| AATTAAGAAAGTGGCATCAG+TGG | - | chr2_1:13333062-13333081 | Msa0196250:CDS | 35.0% | |
| ! | TTGATTTGAGCACTATTGGT+AGG | - | chr2_1:13333103-13333122 | Msa0196250:CDS | 35.0% |
| ACTATTGGTAGGACTAATAC+TGG | - | chr2_1:13333114-13333133 | Msa0196250:CDS | 35.0% | |
| AAATGTTGCATGTCTTGGAT+TGG | - | chr2_1:13333224-13333243 | Msa0196250:CDS | 35.0% | |
| !! | ACTTGCATTTTGAAGGAGAA+GGG | + | chr2_1:13333358-13333377 | None:intergenic | 35.0% |
| !! | AACTTGCATTTTGAAGGAGA+AGG | + | chr2_1:13333359-13333378 | None:intergenic | 35.0% |
| ! | TGGAACAACTTGCATTTTGA+AGG | + | chr2_1:13333365-13333384 | None:intergenic | 35.0% |
| AAGGGCTATTGTGAGAGTTA+GGG | + | chr2_1:13332155-13332174 | None:intergenic | 40.0% | |
| TTCTCCACTTTACTTTGGGT+AGG | - | chr2_1:13332241-13332260 | Msa0196250:CDS | 40.0% | |
| TGTTCCTACCCAAAGTAAAG+TGG | + | chr2_1:13332248-13332267 | None:intergenic | 40.0% | |
| ATATTGGAGGACCAATCCTA+TGG | - | chr2_1:13332299-13332318 | Msa0196250:CDS | 40.0% | |
| TTGCAGTCATACCATAGGAT+TGG | + | chr2_1:13332313-13332332 | None:intergenic | 40.0% | |
| TTCACAAGAGATGGGATTGT+AGG | + | chr2_1:13332356-13332375 | None:intergenic | 40.0% | |
| ! | TTGAGCAACCTGGTTTGAAA+GGG | + | chr2_1:13332423-13332442 | None:intergenic | 40.0% |
| ! | TTTGAGCAACCTGGTTTGAA+AGG | + | chr2_1:13332424-13332443 | None:intergenic | 40.0% |
| CATGTATTGTTTGAGCAACC+TGG | + | chr2_1:13332433-13332452 | None:intergenic | 40.0% | |
| GGTTGCTCAAACAATACATG+TGG | - | chr2_1:13332433-13332452 | Msa0196250:CDS | 40.0% | |
| !!! | GCTATTTTTTCAGGTGACAC+TGG | - | chr2_1:13332484-13332503 | Msa0196250:CDS | 40.0% |
| !! | CTACCAAGTTGGTTTGAAGA+TGG | + | chr2_1:13332736-13332755 | None:intergenic | 40.0% |
| !! | CTTGGTAGTCTTTTCATTGG+TGG | - | chr2_1:13332748-13332767 | Msa0196250:CDS | 40.0% |
| ! | TGGTAGTCTTTTCATTGGTG+GGG | - | chr2_1:13332750-13332769 | Msa0196250:CDS | 40.0% |
| ATATTGGAGCAGTGCTAAAG+GGG | + | chr2_1:13332828-13332847 | None:intergenic | 40.0% | |
| ACTGCTCCAATATTTACCGA+AGG | - | chr2_1:13332835-13332854 | Msa0196250:CDS | 40.0% | |
| GCATCACCTTCGGTAAATAT+TGG | + | chr2_1:13332844-13332863 | None:intergenic | 40.0% | |
| GGAACTATGTAACACAGTGA+AGG | + | chr2_1:13332992-13333011 | None:intergenic | 40.0% | |
| TGGTAGGACTAATACTGGAT+TGG | - | chr2_1:13333119-13333138 | Msa0196250:CDS | 40.0% | |
| ! | TCTTTCTAGCACCAAACCAA+TGG | + | chr2_1:13333154-13333173 | None:intergenic | 40.0% |
| !! | ATTGGTTTGGTGCTAGAAAG+AGG | - | chr2_1:13333153-13333172 | Msa0196250:CDS | 40.0% |
| TGGTGGAAATTCTATGGTGT+TGG | - | chr2_1:13333194-13333213 | Msa0196250:CDS | 40.0% | |
| CCAATAACAACAGCTGTTCT+AGG | + | chr2_1:13333267-13333286 | None:intergenic | 40.0% | |
| CCTAGAACAGCTGTTGTTAT+TGG | - | chr2_1:13333264-13333283 | Msa0196250:CDS | 40.0% | |
| ! | AGAACAGCTGTTGTTATTGG+TGG | - | chr2_1:13333267-13333286 | Msa0196250:CDS | 40.0% |
| CTTACTCACTGAGTTAGAGT+TGG | + | chr2_1:13333385-13333404 | None:intergenic | 40.0% | |
| CTCTAACTCAGTGAGTAAGA+TGG | - | chr2_1:13333386-13333405 | Msa0196250:CDS | 40.0% | |
| AAGGGCTATTGTGAGAGTTA+GGG | + | chr2_1:13332155-13332174 | None:intergenic | 40.0% | |
| TTCTCCACTTTACTTTGGGT+AGG | - | chr2_1:13332241-13332260 | Msa0196250:CDS | 40.0% | |
| TGTTCCTACCCAAAGTAAAG+TGG | + | chr2_1:13332248-13332267 | None:intergenic | 40.0% | |
| ATATTGGAGGACCAATCCTA+TGG | - | chr2_1:13332299-13332318 | Msa0196250:CDS | 40.0% | |
| TTGCAGTCATACCATAGGAT+TGG | + | chr2_1:13332313-13332332 | None:intergenic | 40.0% | |
| TTCACAAGAGATGGGATTGT+AGG | + | chr2_1:13332356-13332375 | None:intergenic | 40.0% | |
| ! | TTGAGCAACCTGGTTTGAAA+GGG | + | chr2_1:13332423-13332442 | None:intergenic | 40.0% |
| ! | TTTGAGCAACCTGGTTTGAA+AGG | + | chr2_1:13332424-13332443 | None:intergenic | 40.0% |
| CATGTATTGTTTGAGCAACC+TGG | + | chr2_1:13332433-13332452 | None:intergenic | 40.0% | |
| GGTTGCTCAAACAATACATG+TGG | - | chr2_1:13332433-13332452 | Msa0196250:CDS | 40.0% | |
| !!! | GCTATTTTTTCAGGTGACAC+TGG | - | chr2_1:13332484-13332503 | Msa0196250:CDS | 40.0% |
| !! | CTACCAAGTTGGTTTGAAGA+TGG | + | chr2_1:13332736-13332755 | None:intergenic | 40.0% |
| !! | CTTGGTAGTCTTTTCATTGG+TGG | - | chr2_1:13332748-13332767 | Msa0196250:CDS | 40.0% |
| ! | TGGTAGTCTTTTCATTGGTG+GGG | - | chr2_1:13332750-13332769 | Msa0196250:CDS | 40.0% |
| ATATTGGAGCAGTGCTAAAG+GGG | + | chr2_1:13332828-13332847 | None:intergenic | 40.0% | |
| ACTGCTCCAATATTTACCGA+AGG | - | chr2_1:13332835-13332854 | Msa0196250:CDS | 40.0% | |
| GCATCACCTTCGGTAAATAT+TGG | + | chr2_1:13332844-13332863 | None:intergenic | 40.0% | |
| GGAACTATGTAACACAGTGA+AGG | + | chr2_1:13332992-13333011 | None:intergenic | 40.0% | |
| TGGTAGGACTAATACTGGAT+TGG | - | chr2_1:13333119-13333138 | Msa0196250:CDS | 40.0% | |
| ! | TCTTTCTAGCACCAAACCAA+TGG | + | chr2_1:13333154-13333173 | None:intergenic | 40.0% |
| !! | ATTGGTTTGGTGCTAGAAAG+AGG | - | chr2_1:13333153-13333172 | Msa0196250:CDS | 40.0% |
| TGGTGGAAATTCTATGGTGT+TGG | - | chr2_1:13333194-13333213 | Msa0196250:CDS | 40.0% | |
| CCAATAACAACAGCTGTTCT+AGG | + | chr2_1:13333267-13333286 | None:intergenic | 40.0% | |
| CCTAGAACAGCTGTTGTTAT+TGG | - | chr2_1:13333264-13333283 | Msa0196250:CDS | 40.0% | |
| ! | AGAACAGCTGTTGTTATTGG+TGG | - | chr2_1:13333267-13333286 | Msa0196250:CDS | 40.0% |
| CTTACTCACTGAGTTAGAGT+TGG | + | chr2_1:13333385-13333404 | None:intergenic | 40.0% | |
| CTCTAACTCAGTGAGTAAGA+TGG | - | chr2_1:13333386-13333405 | Msa0196250:CDS | 40.0% | |
| GAAGGGCTATTGTGAGAGTT+AGG | + | chr2_1:13332156-13332175 | None:intergenic | 45.0% | |
| !! | ATGAAAGGGGTGTTCTTGCA+AGG | + | chr2_1:13332654-13332673 | None:intergenic | 45.0% |
| ! | GGAGCTGATGAAAGCTGTTT+TGG | + | chr2_1:13332679-13332698 | None:intergenic | 45.0% |
| ! | AGTCTTTTCATTGGTGGGGT+AGG | - | chr2_1:13332754-13332773 | Msa0196250:CDS | 45.0% |
| GGATTGGATGTACCAACCAT+TGG | - | chr2_1:13333135-13333154 | Msa0196250:CDS | 45.0% | |
| ! | GGATGTACCAACCATTGGTT+TGG | - | chr2_1:13333140-13333159 | Msa0196250:CDS | 45.0% |
| TCTAGCACCAAACCAATGGT+TGG | + | chr2_1:13333150-13333169 | None:intergenic | 45.0% | |
| !! | TTTGGTGCTAGAAAGAGGTG+TGG | - | chr2_1:13333158-13333177 | Msa0196250:CDS | 45.0% |
| ! | GGTGTGGAGTGGACAATTTT+TGG | - | chr2_1:13333174-13333193 | Msa0196250:CDS | 45.0% |
| !! | GTGGAGTGGACAATTTTTGG+TGG | - | chr2_1:13333177-13333196 | Msa0196250:CDS | 45.0% |
| !! | GCATGTCTTGGATTGGTAGA+TGG | - | chr2_1:13333231-13333250 | Msa0196250:CDS | 45.0% |
| !! | TGTCTTGGATTGGTAGATGG+TGG | - | chr2_1:13333234-13333253 | Msa0196250:CDS | 45.0% |
| ! | TGTTATTGGTGGACACCAGT+TGG | - | chr2_1:13333278-13333297 | Msa0196250:CDS | 45.0% |
| CCAATACAATGTCCTCCAAC+TGG | + | chr2_1:13333296-13333315 | None:intergenic | 45.0% | |
| CCAGTTGGAGGACATTGTAT+TGG | - | chr2_1:13333293-13333312 | Msa0196250:CDS | 45.0% | |
| GAAGGGCTATTGTGAGAGTT+AGG | + | chr2_1:13332156-13332175 | None:intergenic | 45.0% | |
| !! | ATGAAAGGGGTGTTCTTGCA+AGG | + | chr2_1:13332654-13332673 | None:intergenic | 45.0% |
| ! | GGAGCTGATGAAAGCTGTTT+TGG | + | chr2_1:13332679-13332698 | None:intergenic | 45.0% |
| ! | AGTCTTTTCATTGGTGGGGT+AGG | - | chr2_1:13332754-13332773 | Msa0196250:CDS | 45.0% |
| GGATTGGATGTACCAACCAT+TGG | - | chr2_1:13333135-13333154 | Msa0196250:CDS | 45.0% | |
| ! | GGATGTACCAACCATTGGTT+TGG | - | chr2_1:13333140-13333159 | Msa0196250:CDS | 45.0% |
| TCTAGCACCAAACCAATGGT+TGG | + | chr2_1:13333150-13333169 | None:intergenic | 45.0% | |
| !! | TTTGGTGCTAGAAAGAGGTG+TGG | - | chr2_1:13333158-13333177 | Msa0196250:CDS | 45.0% |
| ! | GGTGTGGAGTGGACAATTTT+TGG | - | chr2_1:13333174-13333193 | Msa0196250:CDS | 45.0% |
| !! | GTGGAGTGGACAATTTTTGG+TGG | - | chr2_1:13333177-13333196 | Msa0196250:CDS | 45.0% |
| !! | GCATGTCTTGGATTGGTAGA+TGG | - | chr2_1:13333231-13333250 | Msa0196250:CDS | 45.0% |
| !! | TGTCTTGGATTGGTAGATGG+TGG | - | chr2_1:13333234-13333253 | Msa0196250:CDS | 45.0% |
| ! | TGTTATTGGTGGACACCAGT+TGG | - | chr2_1:13333278-13333297 | Msa0196250:CDS | 45.0% |
| CCAATACAATGTCCTCCAAC+TGG | + | chr2_1:13333296-13333315 | None:intergenic | 45.0% | |
| CCAGTTGGAGGACATTGTAT+TGG | - | chr2_1:13333293-13333312 | Msa0196250:CDS | 45.0% | |
| TGCAATGGCCCTTTCAAACC+AGG | - | chr2_1:13332412-13332431 | Msa0196250:CDS | 50.0% | |
| ! | TGCTAGAAAGAGGTGTGGAG+TGG | - | chr2_1:13333163-13333182 | Msa0196250:CDS | 50.0% |
| ! | TATTGGTGGACACCAGTTGG+AGG | - | chr2_1:13333281-13333300 | Msa0196250:CDS | 50.0% |
| TGCAATGGCCCTTTCAAACC+AGG | - | chr2_1:13332412-13332431 | Msa0196250:CDS | 50.0% | |
| ! | TGCTAGAAAGAGGTGTGGAG+TGG | - | chr2_1:13333163-13333182 | Msa0196250:CDS | 50.0% |
| ! | TATTGGTGGACACCAGTTGG+AGG | - | chr2_1:13333281-13333300 | Msa0196250:CDS | 50.0% |
| GCTGGATGCACTAGCTGCAA+TGG | - | chr2_1:13332397-13332416 | Msa0196250:CDS | 55.0% | |
| GCTGGATGCACTAGCTGCAA+TGG | - | chr2_1:13332397-13332416 | Msa0196250:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 13332124 | 13333443 | 13332124 | ID=Msa0196250;Name=Msa0196250 |
| chr2_1 | mRNA | 13332124 | 13333443 | 13332124 | ID=Msa0196250-mRNA-1;Parent=Msa0196250;Name=Msa0196250-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|-1|0|1|-1|1|1|0|439 |
| chr2_1 | exon | 13332124 | 13333443 | 13332124 | ID=Msa0196250-mRNA-1:exon:5789;Parent=Msa0196250-mRNA-1 |
| chr2_1 | CDS | 13332124 | 13333443 | 13332124 | ID=Msa0196250-mRNA-1:cds;Parent=Msa0196250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
