AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0777070


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0777070 MtrunA17_Chr5g0432351 71.296 324 30 5 1 263 1 322 3.18e-153 429
Msa0777070 MtrunA17_Chr5g0432341 71.077 325 31 5 1 264 1 323 1.11e-152 428
Msa0777070 MtrunA17_Chr5g0432331 67.385 325 43 4 1 264 32 354 2.56e-147 416
Msa0777070 MtrunA17_Chr5g0432401 63.799 279 77 2 6 261 8 285 8.57e-125 356
Msa0777070 MtrunA17_Chr3g0107881 50.473 317 93 5 8 262 10 324 8.20e-95 281
Msa0777070 MtrunA17_Chr4g0013171 45.231 325 111 6 1 262 1 321 1.52e-79 243
Msa0777070 MtrunA17_Chr2g0320071 43.987 316 110 7 9 262 7 317 1.14e-77 238
Msa0777070 MtrunA17_Chr2g0320051 44.000 325 112 7 1 262 1 318 6.82e-77 236
Msa0777070 MtrunA17_Chr3g0114451 46.057 317 106 8 8 262 5 318 1.24e-76 235
Msa0777070 MtrunA17_Chr2g0320101 43.671 316 111 7 9 262 7 317 4.86e-75 231
Msa0777070 MtrunA17_Chr4g0013181 59.910 222 74 6 30 247 62 272 8.70e-74 229
Msa0777070 MtrunA17_Chr4g0013181 60.317 63 23 1 200 262 293 353 4.35e-17 79.7
Msa0777070 MtrunA17_Chr3g0106921 56.477 193 75 5 9 200 12 196 1.76e-70 219
Msa0777070 MtrunA17_Chr3g0106921 60.317 63 23 1 200 262 260 320 1.37e-16 78.2
Msa0777070 MtrunA17_Chr5g0432441 56.410 195 77 5 7 200 14 201 1.82e-70 219
Msa0777070 MtrunA17_Chr5g0432441 61.905 63 22 1 200 262 266 326 1.77e-17 80.5
Msa0777070 MtrunA17_Chr5g0438021 61.932 176 64 2 25 200 29 201 5.66e-69 216
Msa0777070 MtrunA17_Chr5g0438021 53.968 63 27 1 200 262 265 325 5.86e-14 70.5
Msa0777070 MtrunA17_Chr2g0320091 47.257 237 117 4 13 246 11 242 2.45e-67 211
Msa0777070 MtrunA17_Chr2g0320091 57.143 63 25 2 200 262 258 318 2.84e-14 71.2
Msa0777070 MtrunA17_Chr3g0129051 57.838 185 75 2 16 200 17 198 3.31e-66 208
Msa0777070 MtrunA17_Chr3g0129051 57.143 63 25 1 200 262 262 322 4.07e-15 73.9
Msa0777070 MtrunA17_Chr1g0213061 58.333 180 71 4 23 202 23 198 3.99e-66 208
Msa0777070 MtrunA17_Chr1g0213061 53.968 63 28 1 200 262 260 321 2.14e-13 68.9
Msa0777070 MtrunA17_Chr2g0320061 53.500 200 88 4 1 200 1 195 5.90e-65 205
Msa0777070 MtrunA17_Chr2g0320061 60.317 63 24 1 200 262 257 318 4.25e-17 79.3
Msa0777070 MtrunA17_Chr4g0013201 55.670 194 81 4 9 200 26 216 1.47e-64 205
Msa0777070 MtrunA17_Chr4g0013201 55.556 63 26 1 200 262 278 338 1.30e-14 72.4
Msa0777070 MtrunA17_Chr4g0043391 52.083 192 89 2 9 200 9 197 2.73e-64 204
Msa0777070 MtrunA17_Chr4g0043391 53.968 63 28 1 200 262 263 324 2.21e-13 68.9
Msa0777070 MtrunA17_Chr7g0244451 51.316 228 92 6 25 247 22 235 1.01e-63 202
Msa0777070 MtrunA17_Chr4g0038171 52.910 189 86 2 12 200 9 194 1.97e-63 201
Msa0777070 MtrunA17_Chr4g0038171 53.968 63 28 1 200 262 260 321 2.06e-13 68.9
Msa0777070 MtrunA17_Chr5g0404721 56.897 174 72 2 27 200 30 200 3.68e-62 198
Msa0777070 MtrunA17_Chr7g0224371 51.531 196 90 5 6 200 10 201 7.86e-62 197
Msa0777070 MtrunA17_Chr8g0372601 51.724 203 90 4 27 224 30 229 2.90e-61 196
Msa0777070 MtrunA17_Chr8g0372601 49.206 63 31 1 200 262 269 330 8.08e-11 61.6
Msa0777070 MtrunA17_Chr2g0320031 51.832 191 88 3 11 200 9 196 5.12e-61 195
Msa0777070 MtrunA17_Chr2g0320031 58.730 63 25 1 200 262 258 319 5.34e-16 76.3
Msa0777070 MtrunA17_Chr4g0068621 56.180 178 75 3 23 200 34 208 6.74e-61 195
Msa0777070 MtrunA17_Chr4g0038161 51.282 195 90 3 8 200 3 194 7.84e-61 194
Msa0777070 MtrunA17_Chr4g0038161 50.794 63 29 1 200 262 260 320 9.09e-12 64.3
Msa0777070 MtrunA17_Chr4g0013191 51.546 194 89 4 9 200 26 216 1.02e-60 195
Msa0777070 MtrunA17_Chr4g0013191 52.381 63 28 1 200 262 280 340 3.60e-13 68.6
Msa0777070 MtrunA17_Chr4g0013821 48.731 197 98 2 4 200 5 198 1.40e-60 194
Msa0777070 MtrunA17_Chr4g0070951 53.030 198 85 5 4 200 6 196 3.28e-60 193
Msa0777070 MtrunA17_Chr4g0070951 53.030 66 29 1 200 263 265 330 7.23e-11 61.6
Msa0777070 MtrunA17_Chr4g0013721 53.039 181 82 2 20 200 93 270 3.44e-60 196
Msa0777070 MtrunA17_Chr4g0038151 53.977 176 78 2 25 200 23 195 3.50e-60 193
Msa0777070 MtrunA17_Chr4g0038151 50.794 63 29 1 200 262 261 321 2.37e-11 62.8
Msa0777070 MtrunA17_Chr3g0129041 59.341 182 71 3 19 200 20 198 4.27e-60 192
Msa0777070 MtrunA17_Chr3g0129041 58.730 63 24 1 200 262 262 322 1.34e-14 72.4
Msa0777070 MtrunA17_Chr7g0244461 55.114 176 76 2 25 200 18 190 2.83e-59 190
Msa0777070 MtrunA17_Chr7g0244461 53.968 63 27 1 200 262 252 312 1.27e-14 72.4
Msa0777070 MtrunA17_Chr3g0129061 56.250 192 81 2 9 200 10 198 3.77e-59 190
Msa0777070 MtrunA17_Chr3g0129061 57.143 63 25 1 200 262 262 322 4.37e-16 76.6
Msa0777070 MtrunA17_Chr2g0292091 51.630 184 86 3 17 200 14 194 5.94e-59 191
Msa0777070 MtrunA17_Chr2g0292091 47.619 63 33 0 200 262 263 325 6.04e-11 62.0
Msa0777070 MtrunA17_Chr3g0106901 53.202 203 90 3 9 211 13 210 6.17e-58 187
Msa0777070 MtrunA17_Chr3g0106901 57.143 63 25 1 200 262 263 323 8.16e-16 75.9
Msa0777070 MtrunA17_Chr2g0291751 55.114 176 76 3 25 200 27 199 1.02e-57 187
Msa0777070 MtrunA17_Chr2g0291751 50.000 64 32 0 200 263 268 331 7.78e-12 64.7
Msa0777070 MtrunA17_Chr5g0402571 50.746 201 95 4 1 201 1 197 1.96e-57 186
Msa0777070 MtrunA17_Chr7g0258811 46.919 211 105 4 8 214 50 257 3.67e-57 187
Msa0777070 MtrunA17_Chr7g0258811 49.206 63 32 0 200 262 309 371 3.94e-13 68.6
Msa0777070 MtrunA17_Chr1g0155611 51.429 175 82 2 27 201 46 217 5.27e-57 186
Msa0777070 MtrunA17_Chr1g0155611 46.667 60 32 0 203 262 288 347 5.51e-11 62.0
Msa0777070 MtrunA17_Chr2g0299691 50.746 201 91 5 18 215 47 242 6.60e-57 186
Msa0777070 MtrunA17_Chr2g0299691 36.508 126 65 3 141 263 246 359 3.00e-13 68.9
Msa0777070 MtrunA17_Chr2g0292211 47.716 197 97 3 7 203 23 213 1.78e-56 184
Msa0777070 MtrunA17_Chr2g0292211 47.619 63 33 0 200 262 279 341 7.39e-11 61.6
Msa0777070 MtrunA17_Chr2g0292101 37.778 315 124 6 17 262 15 326 5.37e-56 183
Msa0777070 MtrunA17_Chr4g0024121 44.681 235 121 5 1 230 1 231 1.30e-55 181
Msa0777070 MtrunA17_Chr2g0292251 50.549 182 87 3 25 206 26 204 2.29e-55 181
Msa0777070 MtrunA17_Chr2g0292251 50.794 63 31 0 200 262 267 329 6.04e-12 65.1
Msa0777070 MtrunA17_Chr5g0402581 48.756 201 99 4 1 201 1 197 3.02e-55 180
Msa0777070 MtrunA17_Chr1g0175561 46.500 200 100 4 19 214 16 212 2.37e-54 178
Msa0777070 MtrunA17_Chr1g0175561 50.000 64 32 0 199 262 263 326 8.70e-15 73.2
Msa0777070 MtrunA17_Chr5g0400331 52.874 174 79 2 27 200 26 196 4.45e-54 177
Msa0777070 MtrunA17_Chr2g0292261 52.273 176 81 3 25 200 27 199 4.54e-54 178
Msa0777070 MtrunA17_Chr2g0322861 44.726 237 116 8 1 230 62 290 7.36e-54 179
Msa0777070 MtrunA17_Chr2g0292271 50.000 176 85 2 25 200 27 199 1.46e-53 177
Msa0777070 MtrunA17_Chr2g0292271 49.206 63 32 0 200 262 268 330 2.52e-12 65.9
Msa0777070 MtrunA17_Chr2g0292181 52.273 176 81 3 25 200 36 208 1.56e-53 177
Msa0777070 MtrunA17_Chr2g0292181 52.381 63 30 0 200 262 277 339 4.89e-12 65.1
Msa0777070 MtrunA17_Chr6g0477071 35.811 296 127 6 25 262 52 342 1.85e-53 176
Msa0777070 MtrunA17_Chr1g0194271 45.641 195 103 2 9 203 14 205 4.47e-53 175
Msa0777070 MtrunA17_Chr2g0292241 46.569 204 101 3 25 223 27 227 5.93e-53 175
Msa0777070 MtrunA17_Chr2g0292241 50.794 63 31 0 200 262 268 330 7.35e-12 64.7
Msa0777070 MtrunA17_Chr2g0292291 43.443 244 125 6 7 244 13 249 7.95e-53 175
Msa0777070 MtrunA17_Chr2g0292111 47.423 194 95 3 7 200 13 199 1.35e-52 174
Msa0777070 MtrunA17_Chr2g0292111 48.438 64 33 0 200 263 268 331 4.57e-11 62.4
Msa0777070 MtrunA17_Chr1g0204011 50.538 186 87 5 18 203 18 198 5.86e-52 172
Msa0777070 MtrunA17_Chr1g0194151 44.615 195 105 2 9 203 14 205 1.43e-51 171
Msa0777070 MtrunA17_Chr1g0164891 48.276 174 88 2 31 203 93 265 5.58e-50 169
Msa0777070 MtrunA17_Chr1g0188431 47.120 191 94 5 27 217 39 222 1.30e-49 166
Msa0777070 MtrunA17_Chr5g0421411 55.263 152 65 3 50 201 4 152 1.86e-49 164
Msa0777070 MtrunA17_Chr2g0292151 46.907 194 96 4 7 200 13 199 2.62e-49 166
Msa0777070 MtrunA17_Chr2g0292151 51.562 64 31 0 200 263 268 331 2.00e-11 63.5
Msa0777070 MtrunA17_Chr3g0128061 46.927 179 92 2 25 203 24 199 3.69e-48 162
Msa0777070 MtrunA17_Chr7g0268501 41.892 222 118 5 8 224 6 221 8.33e-47 158
Msa0777070 MtrunA17_Chr7g0268521 41.892 222 118 5 8 224 6 221 8.33e-47 158
Msa0777070 MtrunA17_Chr1g0157051 44.103 195 103 5 9 203 7 195 2.19e-45 155
Msa0777070 MtrunA17_Chr3g0114491 65.455 110 37 1 26 135 17 125 1.52e-44 147
Msa0777070 MtrunA17_Chr8g0371381 45.763 177 91 4 27 203 26 197 1.96e-44 152
Msa0777070 MtrunA17_Chr2g0279041 48.235 170 80 5 31 200 31 192 6.59e-43 148
Msa0777070 MtrunA17_Chr6g0460711 40.415 193 109 4 9 201 3 189 2.03e-42 147
Msa0777070 MtrunA17_Chr7g0254201 32.450 302 135 6 25 263 18 313 2.36e-42 147
Msa0777070 MtrunA17_Chr5g0405991 45.763 177 91 4 27 203 23 194 2.83e-42 146
Msa0777070 MtrunA17_Chr2g0278671 46.023 176 88 5 25 200 22 190 2.46e-41 144
Msa0777070 MtrunA17_Chr2g0296621 47.126 174 84 5 27 200 50 215 3.84e-41 144
Msa0777070 MtrunA17_Chr7g0225221 34.169 319 140 9 9 262 7 320 1.44e-40 142
Msa0777070 MtrunA17_Chr7g0254231 32.770 296 133 8 27 262 22 311 1.48e-40 142
Msa0777070 MtrunA17_Chr4g0063671 43.299 194 99 6 10 200 1 186 2.14e-39 139
Msa0777070 MtrunA17_Chr5g0401431 41.294 201 109 6 10 206 11 206 7.37e-39 138
Msa0777070 MtrunA17_Chr2g0316481 43.590 195 101 5 25 214 74 264 2.49e-38 138
Msa0777070 MtrunA17_Chr2g0316791 43.590 195 101 5 25 214 74 264 9.14e-38 137
Msa0777070 MtrunA17_Chr4g0046131 41.436 181 100 4 26 203 41 218 2.65e-37 134
Msa0777070 MtrunA17_Chr2g0316831 43.077 195 102 5 25 214 110 300 2.99e-37 136
Msa0777070 MtrunA17_Chr4g0076211 43.529 170 88 6 31 200 45 206 9.22e-37 132
Msa0777070 MtrunA17_Chr4g0053871 40.097 207 112 6 8 206 4 206 5.48e-36 130
Msa0777070 MtrunA17_Chr1g0148021 42.703 185 97 6 26 206 26 205 9.97e-36 130
Msa0777070 MtrunA17_Chr8g0364291 42.703 185 102 3 23 206 19 200 1.02e-35 130
Msa0777070 MtrunA17_Chr4g0072091 42.391 184 97 5 26 206 23 200 1.30e-35 129
Msa0777070 MtrunA17_Chr2g0316191 42.051 195 104 5 25 214 74 264 1.89e-35 130
Msa0777070 MtrunA17_Chr2g0316811 44.509 173 90 4 25 195 48 216 3.93e-35 128
Msa0777070 MtrunA17_Chr2g0329641 41.011 178 97 5 26 203 35 204 3.02e-34 126
Msa0777070 MtrunA17_Chr4g0075241 37.079 178 109 2 26 203 28 202 4.70e-34 125
Msa0777070 MtrunA17_Chr6g0451571 38.919 185 106 5 25 206 32 212 1.69e-33 124
Msa0777070 MtrunA17_Chr1g0197411 36.869 198 120 4 8 203 9 203 2.11e-32 121
Msa0777070 MtrunA17_Chr2g0311251 41.538 195 104 6 25 214 9 198 9.76e-32 119
Msa0777070 MtrunA17_Chr2g0311241 35.470 234 104 5 25 214 58 288 1.86e-30 117
Msa0777070 MtrunA17_Chr3g0136751 36.652 221 131 4 11 229 9 222 9.53e-30 114
Msa0777070 MtrunA17_Chr1g0181511 35.754 179 111 3 25 203 25 199 1.66e-29 113
Msa0777070 MtrunA17_Chr6g0467121 36.757 185 105 7 22 203 69 244 4.10e-29 113
Msa0777070 MtrunA17_Chr2g0279061 51.538 130 55 5 71 200 12 133 4.66e-29 110
Msa0777070 MtrunA17_Chr1g0181431 35.556 180 112 3 24 203 24 199 8.47e-29 111
Msa0777070 MtrunA17_Chr5g0413051 34.807 181 113 4 27 205 73 250 1.05e-28 112
Msa0777070 MtrunA17_Chr1g0181481 36.313 179 110 3 25 203 25 199 3.22e-28 110
Msa0777070 MtrunA17_Chr5g0432321 96.078 51 2 0 151 201 17 67 9.69e-28 103
Msa0777070 MtrunA17_Chr5g0432361 70.968 62 18 0 200 261 47 108 2.29e-27 102
Msa0777070 MtrunA17_Chr4g0074851 33.333 207 128 4 3 203 2 204 7.51e-27 106
Msa0777070 MtrunA17_Chr6g0467251 35.714 196 119 5 10 203 19 209 7.76e-27 106
Msa0777070 MtrunA17_Chr6g0467161 34.595 185 112 6 22 203 39 217 1.04e-26 106
Msa0777070 MtrunA17_Chr4g0004591 31.818 176 78 3 27 202 77 210 2.13e-20 89.0
Msa0777070 MtrunA17_Chr1g0181491 41.228 114 64 3 25 138 10 120 3.76e-19 81.6
Msa0777070 MtrunA17_Chr2g0316141 45.690 116 57 4 73 186 11 122 2.66e-18 82.4
Msa0777070 MtrunA17_Chr2g0316181 45.690 116 57 4 73 186 11 122 2.66e-18 82.4
Msa0777070 MtrunA17_Chr6g0468731 56.164 73 27 3 66 138 22 89 2.85e-18 77.4
Msa0777070 MtrunA17_Chr2g0292281 55.422 83 35 2 118 200 15 95 4.23e-18 80.9
Msa0777070 MtrunA17_Chr2g0292281 46.154 65 35 0 200 264 154 218 1.12e-11 63.2
Msa0777070 MtrunA17_Chr3g0114461 57.353 68 27 1 134 201 5 70 2.19e-15 72.4
Msa0777070 MtrunA17_Chr3g0114461 53.226 62 28 1 201 262 132 192 1.07e-13 67.8
Msa0777070 MtrunA17_Chr1g0196191 50.000 68 32 2 69 136 27 92 4.12e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0777070 AT5G05340.1 60.227 176 67 2 25 200 28 200 2.23e-69 217
Msa0777070 AT5G05340.1 52.381 63 28 1 200 262 264 324 3.80e-13 68.6
Msa0777070 AT5G06720.1 37.963 324 129 5 8 262 13 333 1.35e-66 210
Msa0777070 AT4G36430.1 41.042 307 108 6 25 262 28 330 1.12e-65 207
Msa0777070 AT2G18150.1 38.762 307 115 5 25 262 34 336 6.86e-64 203
Msa0777070 AT5G58390.1 56.250 192 80 3 10 200 4 192 1.28e-63 202
Msa0777070 AT5G58390.1 53.968 63 27 1 200 262 256 316 4.71e-12 65.5
Msa0777070 AT5G06730.1 37.037 324 132 5 8 262 14 334 3.56e-63 202
Msa0777070 AT1G44970.1 52.239 201 89 5 25 221 43 240 6.64e-63 201
Msa0777070 AT5G58400.1 52.500 200 88 5 3 200 7 201 7.32e-63 200
Msa0777070 AT5G58400.1 50.794 63 29 1 200 262 265 325 5.81e-12 65.1
Msa0777070 AT4G16270.1 56.805 169 70 2 32 200 55 220 1.68e-61 197
Msa0777070 AT3G50990.1 37.621 311 123 4 21 263 35 342 2.23e-61 197
Msa0777070 AT5G66390.1 55.172 174 75 2 27 200 33 203 3.66e-60 194
Msa0777070 AT5G66390.1 46.154 91 43 2 173 263 250 334 1.44e-14 72.8
Msa0777070 AT2G18140.1 39.672 305 111 7 27 262 35 335 4.81e-60 193
Msa0777070 AT1G49570.1 55.367 177 76 3 25 201 46 219 1.43e-59 192
Msa0777070 AT4G08770.1 54.237 177 77 3 25 200 22 195 6.60e-58 188
Msa0777070 AT4G08770.1 34.211 152 74 5 131 262 182 327 2.86e-11 63.2
Msa0777070 AT3G49120.1 53.039 181 81 3 21 200 26 203 1.03e-56 185
Msa0777070 AT2G35380.1 51.042 192 90 3 9 200 13 200 1.13e-56 185
Msa0777070 AT1G14550.1 47.085 223 106 5 10 231 9 220 3.77e-56 183
Msa0777070 AT1G14550.1 57.143 63 26 1 200 262 260 321 1.54e-13 69.7
Msa0777070 AT3G32980.1 53.672 177 78 3 25 200 29 202 3.97e-56 184
Msa0777070 AT3G49110.1 53.107 177 79 3 25 200 31 204 5.20e-55 181
Msa0777070 AT4G08780.1 51.977 177 81 3 25 200 22 195 1.19e-54 180
Msa0777070 AT1G14540.1 52.273 176 81 2 25 200 19 191 4.76e-54 177
Msa0777070 AT1G14540.1 52.381 63 29 1 200 262 254 315 3.58e-12 65.9
Msa0777070 AT2G38380.1 54.237 177 77 3 25 200 29 202 4.95e-54 178
Msa0777070 AT5G51890.1 49.490 196 92 6 10 203 7 197 6.81e-54 177
Msa0777070 AT5G19890.1 49.741 193 90 4 8 200 11 196 1.84e-53 176
Msa0777070 AT1G71695.1 49.730 185 88 4 21 203 38 219 2.84e-53 176
Msa0777070 AT2G22420.1 45.596 193 100 3 8 200 6 193 3.92e-53 175
Msa0777070 AT2G38390.1 52.542 177 80 3 25 200 29 202 5.17e-53 176
Msa0777070 AT1G68850.1 50.000 174 84 3 27 200 30 200 1.80e-52 174
Msa0777070 AT4G11290.1 43.478 207 109 4 25 226 23 226 2.76e-52 173
Msa0777070 AT3G01190.1 50.847 177 80 5 27 203 26 195 3.28e-51 170
Msa0777070 AT5G42180.1 46.231 199 96 5 5 203 7 194 3.92e-50 167
Msa0777070 AT1G05240.1 49.419 172 82 4 30 201 29 195 4.32e-50 167
Msa0777070 AT1G05250.1 49.419 172 82 4 30 201 29 195 4.32e-50 167
Msa0777070 AT1G05260.1 41.228 228 121 6 7 226 3 225 1.27e-49 166
Msa0777070 AT3G21770.1 47.568 185 92 4 19 203 21 200 5.31e-49 165
Msa0777070 AT5G15180.1 46.500 200 98 6 11 206 12 206 5.07e-48 162
Msa0777070 AT5G19880.1 46.078 204 100 4 25 221 23 223 7.60e-48 162
Msa0777070 AT5G19880.1 47.619 63 33 0 200 262 267 329 5.93e-12 65.1
Msa0777070 AT3G03670.1 40.722 194 109 4 8 201 6 193 1.99e-44 152
Msa0777070 AT5G64120.1 40.625 224 115 7 4 217 5 220 3.03e-43 150
Msa0777070 AT4G25980.1 45.506 178 90 5 23 200 22 192 3.05e-43 150
Msa0777070 AT4G33420.1 45.143 175 91 4 27 201 37 206 2.63e-42 147
Msa0777070 AT4G33420.2 45.143 175 91 4 27 201 84 253 7.86e-42 147
Msa0777070 AT1G30870.1 46.857 175 83 6 27 200 51 216 4.59e-41 144
Msa0777070 AT5G17820.1 42.000 200 102 7 19 213 16 206 4.88e-41 144
Msa0777070 AT4G25980.2 44.571 175 90 5 23 197 67 234 7.64e-41 142
Msa0777070 AT2G41480.1 43.299 194 102 5 7 200 9 194 1.44e-40 143
Msa0777070 AT5G17820.2 42.000 200 102 7 19 213 69 259 2.07e-40 143
Msa0777070 AT4G26010.1 40.860 186 102 6 20 203 14 193 1.58e-39 139
Msa0777070 AT4G26010.2 40.860 186 102 6 20 203 42 221 1.90e-39 140
Msa0777070 AT5G64100.1 46.471 170 82 6 31 200 41 201 2.81e-39 139
Msa0777070 AT5G22410.1 40.782 179 99 4 25 203 26 197 5.58e-39 139
Msa0777070 AT4G33870.1 41.954 174 97 3 30 203 71 240 1.80e-38 139
Msa0777070 AT1G77100.1 41.538 195 99 6 11 200 8 192 2.01e-38 137
Msa0777070 AT1G34510.1 30.671 313 151 8 9 262 4 309 2.05e-38 137
Msa0777070 AT4G31760.1 37.281 228 134 5 4 229 6 226 5.06e-38 136
Msa0777070 AT2G24800.1 40.865 208 114 4 24 229 28 228 5.81e-38 136
Msa0777070 AT5G40150.1 38.660 194 107 4 15 203 20 206 1.24e-37 135
Msa0777070 AT5G39580.1 47.368 171 81 7 31 200 29 191 1.30e-37 135
Msa0777070 AT5G64110.1 41.500 200 104 6 5 200 8 198 3.76e-37 134
Msa0777070 AT2G39040.1 42.778 180 99 4 25 203 44 220 8.26e-37 133
Msa0777070 AT3G28200.1 38.889 180 106 3 25 203 19 195 1.26e-36 132
Msa0777070 AT5G39580.2 45.833 168 83 6 31 198 29 188 8.78e-36 128
Msa0777070 AT2G24800.2 38.350 206 113 4 24 222 28 226 2.94e-35 127
Msa0777070 AT2G18980.1 39.216 204 112 7 4 203 2 197 3.59e-35 128
Msa0777070 AT5G47000.1 35.945 217 132 5 8 221 13 225 1.28e-34 127
Msa0777070 AT5G14130.1 39.894 188 106 5 18 203 23 205 1.57e-34 127
Msa0777070 AT4G17690.1 40.314 191 108 4 18 206 17 203 1.58e-34 127
Msa0777070 AT5G14130.2 39.894 188 106 5 18 203 64 246 2.35e-34 127
Msa0777070 AT2G34060.1 36.279 215 120 6 3 203 7 218 7.13e-34 125
Msa0777070 AT4G30170.1 38.798 183 100 6 25 203 25 199 5.93e-33 122
Msa0777070 AT5G67400.1 39.303 201 112 6 9 203 7 203 7.41e-33 122
Msa0777070 AT4G37530.2 40.437 183 101 5 25 203 25 203 9.41e-33 121
Msa0777070 AT2G43480.1 38.542 192 107 6 14 203 22 204 1.10e-32 122
Msa0777070 AT2G35380.2 56.140 114 47 2 87 200 2 112 1.76e-32 119
Msa0777070 AT4G37530.1 40.437 183 101 5 25 203 25 203 2.52e-32 121
Msa0777070 AT3G49960.1 38.919 185 105 5 23 203 23 203 1.38e-31 119
Msa0777070 AT3G17070.1 35.079 191 120 3 27 216 38 225 1.41e-30 117
Msa0777070 AT1G24110.1 35.938 192 115 5 16 203 9 196 2.64e-30 115
Msa0777070 AT5G24070.1 39.153 189 103 7 17 203 26 204 3.47e-29 113
Msa0777070 AT4G37520.1 37.363 182 108 4 25 203 25 203 6.59e-29 112
Msa0777070 AT4G21960.1 36.158 177 109 3 27 203 31 203 2.73e-27 107
Msa0777070 AT4G37520.2 36.813 182 106 5 25 203 25 200 5.05e-27 107
Msa0777070 AT2G37130.2 35.632 174 109 3 30 203 2 172 2.28e-25 102
Msa0777070 AT2G37130.1 35.196 179 113 3 25 203 28 203 2.29e-25 102
Msa0777070 AT3G17070.2 30.675 163 108 4 55 216 4 162 6.65e-16 75.9

Find 42 sgRNAs with CRISPR-Local

Find 164 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGAACAACTAAGTCTTTA+AGG 0.101127 5_2:+55820469 None:intergenic
CCTCTAATTGAATTGTTATT+TGG 0.117052 5_2:+55821082 None:intergenic
CAAATTCTGTCATAATAATT+TGG 0.189849 5_2:+55821499 None:intergenic
CCAAATAACAATTCAATTAG+AGG 0.210718 5_2:-55821082 Msa0777070:CDS
GAAGCCTCTTACTGGGAAAA+AGG 0.220866 5_2:-55820113 Msa0777070:CDS
TATCCTTCTTCATTCATATC+TGG 0.282510 5_2:+55820059 None:intergenic
GGTAATTTGAAGCCTCTTAC+TGG 0.288056 5_2:-55820121 Msa0777070:CDS
AAAGACTTAGTTGTTCTATC+TGG 0.291396 5_2:-55820465 Msa0777070:CDS
GTAACACTTGGTACCAATAT+TGG 0.304974 5_2:+55820604 None:intergenic
TGCAATGGTAGGACTCAAAA+TGG 0.327673 5_2:+55821531 None:intergenic
CTATCTGGTGGTCACACAAT+TGG 0.351955 5_2:-55820450 Msa0777070:intron
GACATCACCTTTGCAAGCTT+TGG 0.386204 5_2:+55821024 None:intergenic
TTTATGATTGGCAATGCCTT+TGG 0.399242 5_2:+55821475 None:intergenic
AGTTGGGAGGTAACCAATAT+TGG 0.411115 5_2:-55820617 Msa0777070:CDS
GATGATACCCCTACCTTCAT+TGG 0.417104 5_2:-55821121 Msa0777070:CDS
TGGAGTTTCTATGATTAAGA+TGG 0.424465 5_2:-55820143 Msa0777070:CDS
AATTATTCGCGAGCCACGTA+TGG 0.428831 5_2:-55821434 Msa0777070:CDS
TATTGGTACCAAGTGTTACT+AGG 0.448839 5_2:-55820600 Msa0777070:CDS
AGCTGCTATAGCTAAAATAT+CGG 0.458807 5_2:+55820991 None:intergenic
GGAGTTTCTATGATTAAGAT+GGG 0.461747 5_2:-55820142 Msa0777070:CDS
CTCTTCTTCCTAGTAACACT+TGG 0.476428 5_2:+55820592 None:intergenic
TGCAGTCTTCTCACCAATGA+AGG 0.480905 5_2:+55821108 None:intergenic
GAGATTCAAGATTTGCAAGC+AGG 0.488930 5_2:-55820572 Msa0777070:CDS
ACTCAAAATGGTTGCAAAAG+TGG 0.498297 5_2:+55821543 None:intergenic
GACTTAGTTGTTCTATCTGG+TGG 0.509368 5_2:-55820462 Msa0777070:CDS
GTAATTTGAAGCCTCTTACT+GGG 0.519840 5_2:-55820120 Msa0777070:CDS
TCTTCTCACCAATGAAGGTA+GGG 0.536322 5_2:+55821113 None:intergenic
AAAGCTCTTGATCAGAATGA+AGG 0.549289 5_2:+55820242 None:intergenic
TTACGTTAACAAAGCAGTCA+TGG 0.552379 5_2:+55821386 None:intergenic
GGAGTCAGCTTTGCAATGGT+AGG 0.560863 5_2:+55821520 None:intergenic
AGATTCAAGATTTGCAAGCA+GGG 0.563486 5_2:-55820571 Msa0777070:CDS
TGGTTCTCAAAGTGATAGAT+TGG 0.568189 5_2:-55820209 Msa0777070:CDS
ATTATTCGCGAGCCACGTAT+GGG 0.583034 5_2:-55821433 Msa0777070:CDS
GTCTTCTCACCAATGAAGGT+AGG 0.586272 5_2:+55821112 None:intergenic
ATTTGGAGTCAGCTTTGCAA+TGG 0.588314 5_2:+55821516 None:intergenic
GAGCCTACACAGGGTTGTGA+TGG 0.597414 5_2:-55821157 Msa0777070:intron
TTCTTCAATCAACAGTTGGG+AGG 0.601444 5_2:-55820630 Msa0777070:intron
CTTCTCACCAATGAAGGTAG+GGG 0.615489 5_2:+55821114 None:intergenic
TTATGACAGAATTTGTCCAA+AGG 0.624218 5_2:-55821491 Msa0777070:CDS
ATCACAAATTTCAAGTCACA+TGG 0.624562 5_2:-55820498 Msa0777070:CDS
GAAGTTACCAAAGCTTGCAA+AGG 0.633455 5_2:-55821031 Msa0777070:CDS
AGCAACGATGCTCCCATACG+TGG 0.654556 5_2:+55821421 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAACAATTGATTTTATGAT+TGG + chr5_2:55820195-55820214 None:intergenic 15.0%
!!! ACGATTACATTTTTAAAATT+AGG - chr5_2:55820313-55820332 Msa0777070:intron 15.0%
!!! AAGACTATTTTTTTATATTG+CGG + chr5_2:55820776-55820795 None:intergenic 15.0%
!!! TACAACTTTTTATATAACAT+TGG + chr5_2:55820836-55820855 None:intergenic 15.0%
!!! ATATGAGTTTAATTTAAACA+TGG + chr5_2:55820921-55820940 None:intergenic 15.0%
!!! TTAACAATTGATTTTATGAT+TGG + chr5_2:55820195-55820214 None:intergenic 15.0%
!!! ACGATTACATTTTTAAAATT+AGG - chr5_2:55820313-55820332 Msa0777070:intron 15.0%
!!! AAGACTATTTTTTTATATTG+CGG + chr5_2:55820776-55820795 None:intergenic 15.0%
!!! TACAACTTTTTATATAACAT+TGG + chr5_2:55820836-55820855 None:intergenic 15.0%
!!! ATATGAGTTTAATTTAAACA+TGG + chr5_2:55820921-55820940 None:intergenic 15.0%
!! TAAAAATCACAACATAACAT+TGG + chr5_2:55820089-55820108 None:intergenic 20.0%
!! CAAATTCTGTCATAATAATT+TGG + chr5_2:55820159-55820178 None:intergenic 20.0%
!!! TGTTAAGTGACTATTTTATA+AGG + chr5_2:55820344-55820363 None:intergenic 20.0%
!!! TATTTTGCACTTTTTAATCA+TGG - chr5_2:55820722-55820741 Msa0777070:intron 20.0%
!! TTGTATTGCAGAAAAATTTA+GGG + chr5_2:55820860-55820879 None:intergenic 20.0%
!! TAAAAATCACAACATAACAT+TGG + chr5_2:55820089-55820108 None:intergenic 20.0%
!! CAAATTCTGTCATAATAATT+TGG + chr5_2:55820159-55820178 None:intergenic 20.0%
!!! TGTTAAGTGACTATTTTATA+AGG + chr5_2:55820344-55820363 None:intergenic 20.0%
!!! TATTTTGCACTTTTTAATCA+TGG - chr5_2:55820722-55820741 Msa0777070:intron 20.0%
!! TTGTATTGCAGAAAAATTTA+GGG + chr5_2:55820860-55820879 None:intergenic 20.0%
!! CCTCTAATTGAATTGTTATT+TGG + chr5_2:55820576-55820595 None:intergenic 25.0%
! CCAAATAACAATTCAATTAG+AGG - chr5_2:55820573-55820592 Msa0777070:CDS 25.0%
!! AACATTGGAAGATTTTATTG+CGG + chr5_2:55820821-55820840 None:intergenic 25.0%
! CTTGTATTGCAGAAAAATTT+AGG + chr5_2:55820861-55820880 None:intergenic 25.0%
!! TTTTCTGCAATACAAGTTTA+TGG - chr5_2:55820865-55820884 Msa0777070:intron 25.0%
!! ATTTTTCTTCAATCAACAGT+TGG - chr5_2:55821021-55821040 Msa0777070:CDS 25.0%
!! TTTTTCTTCAATCAACAGTT+GGG - chr5_2:55821022-55821041 Msa0777070:CDS 25.0%
! ATAGAACAACTAAGTCTTTA+AGG + chr5_2:55821189-55821208 None:intergenic 25.0%
! AGTTGACACAAAATACTATA+AGG - chr5_2:55821368-55821387 Msa0777070:intron 25.0%
!! TATGCTTTTGCTAAAGATTT+TGG - chr5_2:55821492-55821511 Msa0777070:CDS 25.0%
!! CCTCTAATTGAATTGTTATT+TGG + chr5_2:55820576-55820595 None:intergenic 25.0%
! CCAAATAACAATTCAATTAG+AGG - chr5_2:55820573-55820592 Msa0777070:CDS 25.0%
!! AACATTGGAAGATTTTATTG+CGG + chr5_2:55820821-55820840 None:intergenic 25.0%
! CTTGTATTGCAGAAAAATTT+AGG + chr5_2:55820861-55820880 None:intergenic 25.0%
!! TTTTCTGCAATACAAGTTTA+TGG - chr5_2:55820865-55820884 Msa0777070:intron 25.0%
!! ATTTTTCTTCAATCAACAGT+TGG - chr5_2:55821021-55821040 Msa0777070:CDS 25.0%
!! TTTTTCTTCAATCAACAGTT+GGG - chr5_2:55821022-55821041 Msa0777070:CDS 25.0%
! ATAGAACAACTAAGTCTTTA+AGG + chr5_2:55821189-55821208 None:intergenic 25.0%
! AGTTGACACAAAATACTATA+AGG - chr5_2:55821368-55821387 Msa0777070:intron 25.0%
!! TATGCTTTTGCTAAAGATTT+TGG - chr5_2:55821492-55821511 Msa0777070:CDS 25.0%
TTATGACAGAATTTGTCCAA+AGG - chr5_2:55820164-55820183 Msa0777070:CDS 30.0%
! CAATTCAATTAGAGGTTTTG+AGG - chr5_2:55820581-55820600 Msa0777070:CDS 30.0%
AGCTGCTATAGCTAAAATAT+CGG + chr5_2:55820667-55820686 None:intergenic 30.0%
ATCGAATAGATCACTTACTA+TGG + chr5_2:55820703-55820722 None:intergenic 30.0%
AGTTGTGAGAAGTTGAAAAA+TGG + chr5_2:55821136-55821155 None:intergenic 30.0%
! ATCACAAATTTCAAGTCACA+TGG - chr5_2:55821157-55821176 Msa0777070:intron 30.0%
AAAGACTTAGTTGTTCTATC+TGG - chr5_2:55821190-55821209 Msa0777070:intron 30.0%
!! GTTTCTAAAGTTAGTGCATT+TGG + chr5_2:55821236-55821255 None:intergenic 30.0%
! AATGCACTAACTTTAGAAAC+AGG - chr5_2:55821236-55821255 Msa0777070:intron 30.0%
! TATTTTGTGTCAACTCTTGA+AGG + chr5_2:55821363-55821382 None:intergenic 30.0%
!! AAGGCTTTGTTGTATAAACA+AGG - chr5_2:55821387-55821406 Msa0777070:intron 30.0%
TGGAGTTTCTATGATTAAGA+TGG - chr5_2:55821512-55821531 Msa0777070:CDS 30.0%
GGAGTTTCTATGATTAAGAT+GGG - chr5_2:55821513-55821532 Msa0777070:CDS 30.0%
TTATGACAGAATTTGTCCAA+AGG - chr5_2:55820164-55820183 Msa0777070:CDS 30.0%
! CAATTCAATTAGAGGTTTTG+AGG - chr5_2:55820581-55820600 Msa0777070:CDS 30.0%
AGCTGCTATAGCTAAAATAT+CGG + chr5_2:55820667-55820686 None:intergenic 30.0%
ATCGAATAGATCACTTACTA+TGG + chr5_2:55820703-55820722 None:intergenic 30.0%
AGTTGTGAGAAGTTGAAAAA+TGG + chr5_2:55821136-55821155 None:intergenic 30.0%
! ATCACAAATTTCAAGTCACA+TGG - chr5_2:55821157-55821176 Msa0777070:intron 30.0%
AAAGACTTAGTTGTTCTATC+TGG - chr5_2:55821190-55821209 Msa0777070:intron 30.0%
!! GTTTCTAAAGTTAGTGCATT+TGG + chr5_2:55821236-55821255 None:intergenic 30.0%
! AATGCACTAACTTTAGAAAC+AGG - chr5_2:55821236-55821255 Msa0777070:intron 30.0%
! TATTTTGTGTCAACTCTTGA+AGG + chr5_2:55821363-55821382 None:intergenic 30.0%
!! AAGGCTTTGTTGTATAAACA+AGG - chr5_2:55821387-55821406 Msa0777070:intron 30.0%
TGGAGTTTCTATGATTAAGA+TGG - chr5_2:55821512-55821531 Msa0777070:CDS 30.0%
GGAGTTTCTATGATTAAGAT+GGG - chr5_2:55821513-55821532 Msa0777070:CDS 30.0%
ACTCAAAATGGTTGCAAAAG+TGG + chr5_2:55820115-55820134 None:intergenic 35.0%
TTTATGATTGGCAATGCCTT+TGG + chr5_2:55820183-55820202 None:intergenic 35.0%
TTACGTTAACAAAGCAGTCA+TGG + chr5_2:55820272-55820291 None:intergenic 35.0%
TTATATTGCGGTCGCAATTA+GGG + chr5_2:55820764-55820783 None:intergenic 35.0%
TTTATATTGCGGTCGCAATT+AGG + chr5_2:55820765-55820784 None:intergenic 35.0%
GTAACACTTGGTACCAATAT+TGG + chr5_2:55821054-55821073 None:intergenic 35.0%
! TATTGGTACCAAGTGTTACT+AGG - chr5_2:55821055-55821074 Msa0777070:CDS 35.0%
AGATTCAAGATTTGCAAGCA+GGG - chr5_2:55821084-55821103 Msa0777070:CDS 35.0%
TGTGAGAAGTTGAAAAATGG+AGG + chr5_2:55821133-55821152 None:intergenic 35.0%
! TGCAAAATTGGTGTCTATGT+TGG + chr5_2:55821275-55821294 None:intergenic 35.0%
TTGCAAATTCGCTGCAAAAT+TGG + chr5_2:55821287-55821306 None:intergenic 35.0%
AAAGCTCTTGATCAGAATGA+AGG + chr5_2:55821416-55821435 None:intergenic 35.0%
! TCTGATCAAGAGCTTTTCAA+AGG - chr5_2:55821420-55821439 Msa0777070:CDS 35.0%
TGGTTCTCAAAGTGATAGAT+TGG - chr5_2:55821446-55821465 Msa0777070:CDS 35.0%
! GTAATTTGAAGCCTCTTACT+GGG - chr5_2:55821535-55821554 Msa0777070:CDS 35.0%
ACTCAAAATGGTTGCAAAAG+TGG + chr5_2:55820115-55820134 None:intergenic 35.0%
TTTATGATTGGCAATGCCTT+TGG + chr5_2:55820183-55820202 None:intergenic 35.0%
TTACGTTAACAAAGCAGTCA+TGG + chr5_2:55820272-55820291 None:intergenic 35.0%
TTATATTGCGGTCGCAATTA+GGG + chr5_2:55820764-55820783 None:intergenic 35.0%
TTTATATTGCGGTCGCAATT+AGG + chr5_2:55820765-55820784 None:intergenic 35.0%
GTAACACTTGGTACCAATAT+TGG + chr5_2:55821054-55821073 None:intergenic 35.0%
! TATTGGTACCAAGTGTTACT+AGG - chr5_2:55821055-55821074 Msa0777070:CDS 35.0%
AGATTCAAGATTTGCAAGCA+GGG - chr5_2:55821084-55821103 Msa0777070:CDS 35.0%
TGTGAGAAGTTGAAAAATGG+AGG + chr5_2:55821133-55821152 None:intergenic 35.0%
! TGCAAAATTGGTGTCTATGT+TGG + chr5_2:55821275-55821294 None:intergenic 35.0%
TTGCAAATTCGCTGCAAAAT+TGG + chr5_2:55821287-55821306 None:intergenic 35.0%
AAAGCTCTTGATCAGAATGA+AGG + chr5_2:55821416-55821435 None:intergenic 35.0%
! TCTGATCAAGAGCTTTTCAA+AGG - chr5_2:55821420-55821439 Msa0777070:CDS 35.0%
TGGTTCTCAAAGTGATAGAT+TGG - chr5_2:55821446-55821465 Msa0777070:CDS 35.0%
! GTAATTTGAAGCCTCTTACT+GGG - chr5_2:55821535-55821554 Msa0777070:CDS 35.0%
TGCAATGGTAGGACTCAAAA+TGG + chr5_2:55820127-55820146 None:intergenic 40.0%
! ATTTGGAGTCAGCTTTGCAA+TGG + chr5_2:55820142-55820161 None:intergenic 40.0%
TCTTCTCACCAATGAAGGTA+GGG + chr5_2:55820545-55820564 None:intergenic 40.0%
GAAGTTACCAAAGCTTGCAA+AGG - chr5_2:55820624-55820643 Msa0777070:intron 40.0%
TTCTTCAATCAACAGTTGGG+AGG - chr5_2:55821025-55821044 Msa0777070:CDS 40.0%
AGTTGGGAGGTAACCAATAT+TGG - chr5_2:55821038-55821057 Msa0777070:CDS 40.0%
CTCTTCTTCCTAGTAACACT+TGG + chr5_2:55821066-55821085 None:intergenic 40.0%
GAGATTCAAGATTTGCAAGC+AGG - chr5_2:55821083-55821102 Msa0777070:CDS 40.0%
GAGAAGTTGAAAAATGGAGG+TGG + chr5_2:55821130-55821149 None:intergenic 40.0%
GACTTAGTTGTTCTATCTGG+TGG - chr5_2:55821193-55821212 Msa0777070:intron 40.0%
CAAAAGACATGCCCTAGAAT+TGG - chr5_2:55821304-55821323 Msa0777070:intron 40.0%
TCTTGAAGGAGTAGAATCAC+TGG + chr5_2:55821349-55821368 None:intergenic 40.0%
! CAAGAGCTTTTCAAAGGTGA+TGG - chr5_2:55821426-55821445 Msa0777070:CDS 40.0%
! GGTAATTTGAAGCCTCTTAC+TGG - chr5_2:55821534-55821553 Msa0777070:CDS 40.0%
AAGCCTCTTACTGGGAAAAA+GGG - chr5_2:55821543-55821562 Msa0777070:CDS 40.0%
TGCAATGGTAGGACTCAAAA+TGG + chr5_2:55820127-55820146 None:intergenic 40.0%
! ATTTGGAGTCAGCTTTGCAA+TGG + chr5_2:55820142-55820161 None:intergenic 40.0%
TCTTCTCACCAATGAAGGTA+GGG + chr5_2:55820545-55820564 None:intergenic 40.0%
GAAGTTACCAAAGCTTGCAA+AGG - chr5_2:55820624-55820643 Msa0777070:intron 40.0%
TTCTTCAATCAACAGTTGGG+AGG - chr5_2:55821025-55821044 Msa0777070:CDS 40.0%
AGTTGGGAGGTAACCAATAT+TGG - chr5_2:55821038-55821057 Msa0777070:CDS 40.0%
CTCTTCTTCCTAGTAACACT+TGG + chr5_2:55821066-55821085 None:intergenic 40.0%
GAGATTCAAGATTTGCAAGC+AGG - chr5_2:55821083-55821102 Msa0777070:CDS 40.0%
GAGAAGTTGAAAAATGGAGG+TGG + chr5_2:55821130-55821149 None:intergenic 40.0%
GACTTAGTTGTTCTATCTGG+TGG - chr5_2:55821193-55821212 Msa0777070:intron 40.0%
CAAAAGACATGCCCTAGAAT+TGG - chr5_2:55821304-55821323 Msa0777070:intron 40.0%
TCTTGAAGGAGTAGAATCAC+TGG + chr5_2:55821349-55821368 None:intergenic 40.0%
! CAAGAGCTTTTCAAAGGTGA+TGG - chr5_2:55821426-55821445 Msa0777070:CDS 40.0%
! GGTAATTTGAAGCCTCTTAC+TGG - chr5_2:55821534-55821553 Msa0777070:CDS 40.0%
AAGCCTCTTACTGGGAAAAA+GGG - chr5_2:55821543-55821562 Msa0777070:CDS 40.0%
AATTATTCGCGAGCCACGTA+TGG - chr5_2:55820221-55820240 Msa0777070:CDS 45.0%
ATTATTCGCGAGCCACGTAT+GGG - chr5_2:55820222-55820241 Msa0777070:CDS 45.0%
TGAACATTGTGAGCCTACAC+AGG - chr5_2:55820488-55820507 Msa0777070:CDS 45.0%
GAACATTGTGAGCCTACACA+GGG - chr5_2:55820489-55820508 Msa0777070:CDS 45.0%
GATGATACCCCTACCTTCAT+TGG - chr5_2:55820534-55820553 Msa0777070:CDS 45.0%
CTTCTCACCAATGAAGGTAG+GGG + chr5_2:55820544-55820563 None:intergenic 45.0%
GTCTTCTCACCAATGAAGGT+AGG + chr5_2:55820546-55820565 None:intergenic 45.0%
TGCAGTCTTCTCACCAATGA+AGG + chr5_2:55820550-55820569 None:intergenic 45.0%
GACATCACCTTTGCAAGCTT+TGG + chr5_2:55820634-55820653 None:intergenic 45.0%
CTATCTGGTGGTCACACAAT+TGG - chr5_2:55821205-55821224 Msa0777070:intron 45.0%
GAAGCCTCTTACTGGGAAAA+AGG - chr5_2:55821542-55821561 Msa0777070:CDS 45.0%
! TCACCCTTTTTCCCAGTAAG+AGG + chr5_2:55821549-55821568 None:intergenic 45.0%
AATTATTCGCGAGCCACGTA+TGG - chr5_2:55820221-55820240 Msa0777070:CDS 45.0%
ATTATTCGCGAGCCACGTAT+GGG - chr5_2:55820222-55820241 Msa0777070:CDS 45.0%
TGAACATTGTGAGCCTACAC+AGG - chr5_2:55820488-55820507 Msa0777070:CDS 45.0%
GAACATTGTGAGCCTACACA+GGG - chr5_2:55820489-55820508 Msa0777070:CDS 45.0%
GATGATACCCCTACCTTCAT+TGG - chr5_2:55820534-55820553 Msa0777070:CDS 45.0%
CTTCTCACCAATGAAGGTAG+GGG + chr5_2:55820544-55820563 None:intergenic 45.0%
GTCTTCTCACCAATGAAGGT+AGG + chr5_2:55820546-55820565 None:intergenic 45.0%
TGCAGTCTTCTCACCAATGA+AGG + chr5_2:55820550-55820569 None:intergenic 45.0%
GACATCACCTTTGCAAGCTT+TGG + chr5_2:55820634-55820653 None:intergenic 45.0%
CTATCTGGTGGTCACACAAT+TGG - chr5_2:55821205-55821224 Msa0777070:intron 45.0%
GAAGCCTCTTACTGGGAAAA+AGG - chr5_2:55821542-55821561 Msa0777070:CDS 45.0%
! TCACCCTTTTTCCCAGTAAG+AGG + chr5_2:55821549-55821568 None:intergenic 45.0%
GGAGTCAGCTTTGCAATGGT+AGG + chr5_2:55820138-55820157 None:intergenic 50.0%
GATCCATCACAACCCTGTGT+AGG + chr5_2:55820504-55820523 None:intergenic 50.0%
TGTCGTCGTCGCCAATTCTA+GGG + chr5_2:55821318-55821337 None:intergenic 50.0%
TTGTCGTCGTCGCCAATTCT+AGG + chr5_2:55821319-55821338 None:intergenic 50.0%
CTGGGAAAAAGGGTGAGATC+AGG - chr5_2:55821553-55821572 Msa0777070:CDS 50.0%
GGAGTCAGCTTTGCAATGGT+AGG + chr5_2:55820138-55820157 None:intergenic 50.0%
GATCCATCACAACCCTGTGT+AGG + chr5_2:55820504-55820523 None:intergenic 50.0%
TGTCGTCGTCGCCAATTCTA+GGG + chr5_2:55821318-55821337 None:intergenic 50.0%
TTGTCGTCGTCGCCAATTCT+AGG + chr5_2:55821319-55821338 None:intergenic 50.0%
CTGGGAAAAAGGGTGAGATC+AGG - chr5_2:55821553-55821572 Msa0777070:CDS 50.0%
AGCAACGATGCTCCCATACG+TGG + chr5_2:55820237-55820256 None:intergenic 55.0%
GAGCCTACACAGGGTTGTGA+TGG - chr5_2:55820498-55820517 Msa0777070:CDS 55.0%
AGCAACGATGCTCCCATACG+TGG + chr5_2:55820237-55820256 None:intergenic 55.0%
GAGCCTACACAGGGTTGTGA+TGG - chr5_2:55820498-55820517 Msa0777070:CDS 55.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 55820072 55821605 55820072 ID=Msa0777070;Name=Msa0777070
chr5_2 mRNA 55820072 55821605 55820072 ID=Msa0777070-mRNA-1;Parent=Msa0777070;Name=Msa0777070-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0|0|1|1|1|4|0|264
chr5_2 exon 55821390 55821605 55821390 ID=Msa0777070-mRNA-1:exon:16547;Parent=Msa0777070-mRNA-1
chr5_2 exon 55820973 55821167 55820973 ID=Msa0777070-mRNA-1:exon:16546;Parent=Msa0777070-mRNA-1
chr5_2 exon 55820451 55820637 55820451 ID=Msa0777070-mRNA-1:exon:16545;Parent=Msa0777070-mRNA-1
chr5_2 exon 55820072 55820268 55820072 ID=Msa0777070-mRNA-1:exon:16544;Parent=Msa0777070-mRNA-1
chr5_2 CDS 55821390 55821605 55821390 ID=Msa0777070-mRNA-1:cds;Parent=Msa0777070-mRNA-1
chr5_2 CDS 55820973 55821167 55820973 ID=Msa0777070-mRNA-1:cds;Parent=Msa0777070-mRNA-1
chr5_2 CDS 55820451 55820637 55820451 ID=Msa0777070-mRNA-1:cds;Parent=Msa0777070-mRNA-1
chr5_2 CDS 55820072 55820268 55820072 ID=Msa0777070-mRNA-1:cds;Parent=Msa0777070-mRNA-1
Gene Sequence

>Msa0777070

ATGGATTCTCGTAACCAATGTTATGTTGTGATTTTTATGACCACTTTTGCAACCATTTTGAGTCCTACCATTGCAAAGCTGACTCCAAATTATTATGACAGAATTTGTCCAAAGGCATTGCCAATCATAAAATCAATTGTTAAGCAAGCAATTATTCGCGAGCCACGTATGGGAGCATCGTTGCTACGCTTGCATTTCCATGACTGCTTTGTTAACGGTTGTGATGGATCAGTTCTACTAGATGATACCCCTACCTTCATTGGTGAGAAGACTGCATTTCCAAATAACAATTCAATTAGAGGTTTTGAGGTTGTTGATCAAATCAAAGCTGAAGTTACCAAAGCTTGCAAAGGTGATGTCGTATCATGTGCCGATATTTTAGCTATAGCAGCTCGAGACTCTGTTGCCATATTGGGAGGTAACCAATATTGGTACCAAGTGTTACTAGGAAGAAGAGATTCAAGATTTGCAAGCAGGGATGCAGCAAATACAAATCTTCCACCTCCATTTTTCAACTTCTCACAACTCATCACAAATTTCAAGTCACATGGACTTAACCTTAAAGACTTAGTTGTTCTATCTGGTGGTCACACAATTGGTCTCCTTCATTCTGATCAAGAGCTTTTCAAAGGTGATGGTTCTCAAAGTGATAGATTGGTGCAACTTTATAGTAAAAATTCTTATGCTTTTGCTAAAGATTTTGGAGTTTCTATGATTAAGATGGGTAATTTGAAGCCTCTTACTGGGAAAAAGGGTGAGATCAGGTGCAATTGCAGAAAAGTTAACCAGATATGA

Protein sequence

>Msa0777070

MDSRNQCYVVIFMTTFATILSPTIAKLTPNYYDRICPKALPIIKSIVKQAIIREPRMGASLLRLHFHDCFVNGCDGSVLLDDTPTFIGEKTAFPNNNSIRGFEVVDQIKAEVTKACKGDVVSCADILAIAARDSVAILGGNQYWYQVLLGRRDSRFASRDAANTNLPPPFFNFSQLITNFKSHGLNLKDLVVLSGGHTIGLLHSDQELFKGDGSQSDRLVQLYSKNSYAFAKDFGVSMIKMGNLKPLTGKKGEIRCNCRKVNQI*