Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0075840 | XP_013468582.1 | 97.537 | 609 | 11 | 1 | 1 | 605 | 1 | 609 | 0.0 | 1201 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0075840 | sp|Q8W104|FBL17_ARATH | 58.725 | 596 | 196 | 9 | 28 | 603 | 27 | 592 | 0.0 | 643 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0075840 | A0A072VKR1 | 97.537 | 609 | 11 | 1 | 1 | 605 | 1 | 609 | 0.0 | 1201 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004590 | Msa0075840 | 0.814675 | 1.365554e-51 | -8.615850e-47 |
| Msa0006840 | Msa0075840 | 0.819060 | 1.416108e-52 | -8.615850e-47 |
| Msa0030070 | Msa0075840 | 0.804922 | 1.711685e-49 | -8.615850e-47 |
| Msa0036810 | Msa0075840 | 0.802789 | 4.748289e-49 | -8.615850e-47 |
| Msa0037660 | Msa0075840 | 0.806992 | 6.281490e-50 | -8.615850e-47 |
| Msa0045620 | Msa0075840 | 0.831616 | 1.509101e-55 | -8.615850e-47 |
| Msa0050530 | Msa0075840 | 0.822196 | 2.695335e-53 | -8.615850e-47 |
| Msa0057860 | Msa0075840 | 0.828582 | 8.299807e-55 | -8.615850e-47 |
| Msa0073270 | Msa0075840 | 0.819424 | 1.169785e-52 | -8.615850e-47 |
| Msa0075840 | Msa0100600 | 0.820220 | 7.697188e-53 | -8.615850e-47 |
| Msa0075840 | Msa0100890 | 0.841607 | 4.289499e-58 | -8.615850e-47 |
| Msa0075840 | Msa0102920 | 0.811034 | 8.566227e-51 | -8.615850e-47 |
| Msa0075840 | Msa0125590 | 0.809678 | 1.680730e-50 | -8.615850e-47 |
| Msa0075840 | Msa0147680 | 0.826001 | 3.447321e-54 | -8.615850e-47 |
| Msa0075840 | Msa0168380 | 0.845947 | 2.954477e-59 | -8.615850e-47 |
| Msa0075840 | Msa0195260 | 0.806155 | 9.438070e-50 | -8.615850e-47 |
| Msa0075840 | Msa0196250 | 0.801098 | 1.056713e-48 | -8.615850e-47 |
| Msa0075840 | Msa0204970 | 0.806643 | 7.446055e-50 | -8.615850e-47 |
| Msa0075840 | Msa0235080 | 0.807833 | 4.166133e-50 | -8.615850e-47 |
| Msa0075840 | Msa0249870 | 0.802496 | 5.457893e-49 | -8.615850e-47 |
| Msa0075840 | Msa0260980 | 0.809000 | 2.348879e-50 | -8.615850e-47 |
| Msa0075840 | Msa0273360 | 0.800411 | 1.459470e-48 | -8.615850e-47 |
| Msa0075840 | Msa0279000 | 0.835386 | 1.729295e-56 | -8.615850e-47 |
| Msa0075840 | Msa0307430 | 0.802145 | 6.446710e-49 | -8.615850e-47 |
| Msa0075840 | Msa0336520 | 0.821622 | 3.661969e-53 | -8.615850e-47 |
| Msa0075840 | Msa0385030 | 0.806029 | 1.002900e-49 | -8.615850e-47 |
| Msa0075840 | Msa0416210 | 0.831184 | 1.927721e-55 | -8.615850e-47 |
| Msa0075840 | Msa0418100 | 0.802224 | 6.208654e-49 | -8.615850e-47 |
| Msa0075840 | Msa0433630 | 0.850863 | 1.289913e-60 | -8.615850e-47 |
| Msa0075840 | Msa0468390 | 0.802526 | 5.380072e-49 | -8.615850e-47 |
| Msa0075840 | Msa0469060 | 0.805498 | 1.296712e-49 | -8.615850e-47 |
| Msa0075840 | Msa0479480 | 0.830587 | 2.699690e-55 | -8.615850e-47 |
| Msa0075840 | Msa0521510 | 0.829128 | 6.122437e-55 | -8.615850e-47 |
| Msa0075840 | Msa0521530 | 0.821422 | 4.071589e-53 | -8.615850e-47 |
| Msa0075840 | Msa0527850 | 0.805465 | 1.317381e-49 | -8.615850e-47 |
| Msa0075840 | Msa0528310 | 0.804940 | 1.697457e-49 | -8.615850e-47 |
| Msa0075840 | Msa0549870 | 0.802826 | 4.664932e-49 | -8.615850e-47 |
| Msa0075840 | Msa0566460 | 0.802823 | 4.672802e-49 | -8.615850e-47 |
| Msa0075840 | Msa0568290 | -0.802608 | 5.175026e-49 | -8.615850e-47 |
| Msa0075840 | Msa0572360 | 0.810881 | 9.245482e-51 | -8.615850e-47 |
| Msa0075840 | Msa0572830 | 0.805952 | 1.041000e-49 | -8.615850e-47 |
| Msa0075840 | Msa0576330 | 0.806904 | 6.557607e-50 | -8.615850e-47 |
| Msa0075840 | Msa0582460 | 0.813830 | 2.098587e-51 | -8.615850e-47 |
| Msa0075840 | Msa0584970 | 0.802878 | 4.552208e-49 | -8.615850e-47 |
| Msa0075840 | Msa0586200 | 0.804429 | 2.169459e-49 | -8.615850e-47 |
| Msa0075840 | Msa0618840 | 0.809630 | 1.720509e-50 | -8.615850e-47 |
| Msa0075840 | Msa0618990 | 0.817891 | 2.606119e-52 | -8.615850e-47 |
| Msa0075840 | Msa0623310 | 0.838893 | 2.194263e-57 | -8.615850e-47 |
| Msa0075840 | Msa0646260 | 0.817935 | 2.547607e-52 | -8.615850e-47 |
| Msa0075840 | Msa0663290 | 0.822645 | 2.120898e-53 | -8.615850e-47 |
| Msa0075840 | Msa0664070 | 0.827720 | 1.338518e-54 | -8.615850e-47 |
| Msa0075840 | Msa0673940 | 0.809692 | 1.668896e-50 | -8.615850e-47 |
| Msa0075840 | Msa0676200 | 0.816381 | 5.694762e-52 | -8.615850e-47 |
| Msa0075840 | Msa0689830 | 0.831996 | 1.215848e-55 | -8.615850e-47 |
| Msa0075840 | Msa0704690 | 0.802850 | 4.612714e-49 | -8.615850e-47 |
| Msa0075840 | Msa0708980 | 0.819739 | 9.913639e-53 | -8.615850e-47 |
| Msa0075840 | Msa0751720 | 0.807271 | 5.484635e-50 | -8.615850e-47 |
| Msa0075840 | Msa0761830 | 0.850445 | 1.690744e-60 | -8.615850e-47 |
| Msa0075840 | Msa0771910 | 0.806108 | 9.653299e-50 | -8.615850e-47 |
| Msa0075840 | Msa0804170 | 0.809132 | 2.200507e-50 | -8.615850e-47 |
| Msa0075840 | Msa0810080 | 0.814285 | 1.665032e-51 | -8.615850e-47 |
| Msa0075840 | Msa0831820 | 0.821147 | 4.712802e-53 | -8.615850e-47 |
| Msa0075840 | Msa0842180 | 0.812243 | 4.675785e-51 | -8.615850e-47 |
| Msa0075840 | Msa0846900 | 0.845824 | 3.191376e-59 | -8.615850e-47 |
| Msa0075840 | Msa0929900 | 0.804192 | 2.430831e-49 | -8.615850e-47 |
| Msa0075840 | Msa0978980 | 0.803259 | 3.797369e-49 | -8.615850e-47 |
| Msa0075840 | Msa1021560 | 0.838689 | 2.477467e-57 | -8.615850e-47 |
| Msa0075840 | Msa1026710 | 0.819903 | 9.094482e-53 | -8.615850e-47 |
| Msa0075840 | Msa1083630 | 0.836793 | 7.596284e-57 | -8.615850e-47 |
| Msa0075840 | Msa1085680 | 0.813270 | 2.785983e-51 | -8.615850e-47 |
| Msa0075840 | Msa1105540 | 0.829184 | 5.931354e-55 | -8.615850e-47 |
| Msa0075840 | Msa1105580 | 0.834678 | 2.608272e-56 | -8.615850e-47 |
| Msa0075840 | Msa1124210 | 0.823665 | 1.225893e-53 | -8.615850e-47 |
| Msa0075840 | Msa1128620 | 0.817734 | 2.828556e-52 | -8.615850e-47 |
| Msa0075840 | Msa1130770 | 0.800880 | 1.171214e-48 | -8.615850e-47 |
| Msa0075840 | Msa1148930 | 0.838785 | 2.339534e-57 | -8.615850e-47 |
| Msa0075840 | Msa1162360 | 0.807628 | 4.605702e-50 | -8.615850e-47 |
| Msa0075840 | Msa1180840 | 0.806803 | 6.889423e-50 | -8.615850e-47 |
| Msa0075840 | Msa1201170 | 0.809223 | 2.103810e-50 | -8.615850e-47 |
| Msa0075840 | Msa1217890 | 0.804233 | 2.383779e-49 | -8.615850e-47 |
| Msa0075840 | Msa1220580 | 0.830498 | 2.839176e-55 | -8.615850e-47 |
| Msa0075840 | Msa1294280 | 0.802780 | 4.768788e-49 | -8.615850e-47 |
| Msa0075840 | Msa1323260 | -0.804096 | 2.544822e-49 | -8.615850e-47 |
| Msa0075840 | Msa1334560 | 0.825681 | 4.106510e-54 | -8.615850e-47 |
| Msa0075840 | Msa1343450 | -0.807753 | 4.333976e-50 | -8.615850e-47 |
| Msa0075840 | Msa1347610 | 0.809057 | 2.283273e-50 | -8.615850e-47 |
| Msa0075840 | Msa1361680 | 0.827523 | 1.492282e-54 | -8.615850e-47 |
| Msa0075840 | Msa1362590 | 0.807316 | 5.365578e-50 | -8.615850e-47 |
| Msa0075840 | Msa1371800 | 0.827514 | 1.500197e-54 | -8.615850e-47 |
| Msa0075840 | Msa1372030 | 0.826723 | 2.320357e-54 | -8.615850e-47 |
| Msa0075840 | Msa1376310 | 0.834412 | 3.042241e-56 | -8.615850e-47 |
| Msa0075840 | Msa1379940 | 0.817183 | 3.762769e-52 | -8.615850e-47 |
| Msa0075840 | Msa1381330 | 0.841969 | 3.442440e-58 | -8.615850e-47 |
| Msa0075840 | Msa1385570 | 0.800785 | 1.224774e-48 | -8.615850e-47 |
| Msa0075840 | Msa1413020 | 0.813072 | 3.079792e-51 | -8.615850e-47 |
| Msa0075840 | Msa1420830 | 0.820647 | 6.141994e-53 | -8.615850e-47 |
| Msa0075840 | Msa1431520 | 0.823565 | 1.293829e-53 | -8.615850e-47 |
| Msa0075840 | Msa1447900 | 0.806265 | 8.947997e-50 | -8.615850e-47 |
| Msa0075840 | Msa1450630 | -0.800641 | 1.310320e-48 | -8.615850e-47 |
| Msa0075840 | Msa1460970 | 0.806559 | 7.754556e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0075840 | MtrunA17_Chr1g0184781 | 97.537 | 609 | 11 | 1 | 1 | 605 | 1 | 609 | 0.0 | 1201 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0075840 | AT3G54650.1 | 58.725 | 596 | 196 | 9 | 28 | 603 | 27 | 592 | 0.0 | 643 |
Find 164 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAATGCTTTCTCTTGTTCT+TGG | 0.137595 | 1_2:+51447952 | Msa0075840:CDS |
| ATTGCCACTTCTTGAACTTA+TGG | 0.229544 | 1_2:+51448481 | Msa0075840:CDS |
| AGATTCAGATCATTGAGTTC+TGG | 0.289246 | 1_2:-51448784 | None:intergenic |
| ATGCCCTAATCTGGAATCTA+TGG | 0.302684 | 1_2:+51446399 | Msa0075840:CDS |
| TCTTGCAGAAATCTGCATTC+AGG | 0.307911 | 1_2:+51448811 | Msa0075840:CDS |
| ATAAGGAACCCGAACCCTTT+TGG | 0.310964 | 1_2:-51449319 | None:intergenic |
| ACCTCGCCACTAAGTAAATA+AGG | 0.317400 | 1_2:-51449336 | None:intergenic |
| AGATTACTTGAAGTCACATT+AGG | 0.329783 | 1_2:-51448349 | None:intergenic |
| CGGCGAGCGCTTTCGTTTGA+CGG | 0.335154 | 1_2:+51445591 | Msa0075840:CDS |
| ACCGCCGGCGGGATTGTTAT+CGG | 0.335562 | 1_2:+51445797 | Msa0075840:CDS |
| GTGGTGGTTGTGGTGGAAAC+TGG | 0.336712 | 1_2:-51445486 | None:intergenic |
| TTCTGGGCAGTTTAAGTATA+GGG | 0.340833 | 1_2:-51448767 | None:intergenic |
| ATGGAAGGTTGTTCTAATCT+AGG | 0.345750 | 1_2:+51447044 | Msa0075840:CDS |
| TTCTGTACCGTCTGCGGTCT+CGG | 0.351169 | 1_2:+51445542 | Msa0075840:CDS |
| CTGACTTTGTTACCTGACTT+TGG | 0.352864 | 1_2:-51449019 | None:intergenic |
| CGGGTTCCTTATTTACTTAG+TGG | 0.355932 | 1_2:+51449330 | Msa0075840:CDS |
| GTGGTTGGATCTGGGAAATT+AGG | 0.363246 | 1_2:-51448527 | None:intergenic |
| TTGGAAAATGTTCATGCATC+AGG | 0.363317 | 1_2:+51448969 | Msa0075840:CDS |
| CATAACTATGATTGAAGGAT+TGG | 0.367458 | 1_2:+51447326 | Msa0075840:CDS |
| GATTGATTCGAGCGGTTTGC+CGG | 0.370129 | 1_2:+51445743 | Msa0075840:CDS |
| TATGTTTGACGATTAGCTTT+TGG | 0.381510 | 1_2:-51448607 | None:intergenic |
| CGGCGTGGTGGTGGTGGTTG+TGG | 0.382786 | 1_2:-51445496 | None:intergenic |
| TCTCCATAGATTCCAGATTA+GGG | 0.385939 | 1_2:-51446402 | None:intergenic |
| ACAAACTGAGTTTCTTTAAA+CGG | 0.387577 | 1_2:-51448631 | None:intergenic |
| AGGTCAAGCAACTCTAGATT+TGG | 0.388297 | 1_2:-51448021 | None:intergenic |
| GATTCAGATCATTGAGTTCT+GGG | 0.393116 | 1_2:-51448783 | None:intergenic |
| GATGAGATACAGTTTCATCT+AGG | 0.395077 | 1_2:-51449909 | None:intergenic |
| GATTACTTGAAGTCACATTA+GGG | 0.397659 | 1_2:-51448348 | None:intergenic |
| CGACGGAGGAGTTGAAGCTT+AGG | 0.401872 | 1_2:+51445871 | Msa0075840:CDS |
| CTGATGGCTCCAAAAGGGTT+CGG | 0.402880 | 1_2:+51449310 | Msa0075840:CDS |
| CTCTTACTGCTGCTCAATTG+AGG | 0.403465 | 1_2:+51447418 | Msa0075840:CDS |
| GCGGTTTGCCGGGGAATTTA+CGG | 0.407564 | 1_2:+51445754 | Msa0075840:CDS |
| CTCAGTTTGTGGGGTTGCAC+CGG | 0.411998 | 1_2:+51448644 | Msa0075840:CDS |
| AGATGGAGATGGAGATTTGT+TGG | 0.417613 | 1_2:+51445683 | Msa0075840:CDS |
| AGATGGAGATTTGTTGGATC+TGG | 0.419722 | 1_2:+51445689 | Msa0075840:CDS |
| CTTGTATGAACTATGGTCTA+TGG | 0.424935 | 1_2:+51449959 | Msa0075840:three_prime_UTR |
| TGTTCATGCATCAGGTTGTC+AGG | 0.425658 | 1_2:+51448977 | Msa0075840:CDS |
| AAAGCCGCATTGAAGCTATA+TGG | 0.425901 | 1_2:-51447377 | None:intergenic |
| GGCATAAGTGACAGCGGCAT+TGG | 0.430264 | 1_2:+51448271 | Msa0075840:CDS |
| TGATGGCTCCAAAAGGGTTC+GGG | 0.430597 | 1_2:+51449311 | Msa0075840:CDS |
| TTTGAGGCTTTCGCTTAGAA+TGG | 0.430849 | 1_2:+51445953 | Msa0075840:CDS |
| AGGCTTGACGATAAAGCGTT+TGG | 0.431841 | 1_2:+51445648 | Msa0075840:CDS |
| ATCTCCATAGATTCCAGATT+AGG | 0.431846 | 1_2:-51446403 | None:intergenic |
| GTTCTGGGCAGTTTAAGTAT+AGG | 0.432059 | 1_2:-51448768 | None:intergenic |
| TATTACCTGTTTGGTAGCTA+AGG | 0.432939 | 1_2:-51449856 | None:intergenic |
| TTCAATTTAGGCTCTCAAAC+TGG | 0.434062 | 1_2:+51449883 | Msa0075840:three_prime_UTR |
| ACCGCCACCAATCGGATCAA+TGG | 0.439840 | 1_2:+51446439 | Msa0075840:CDS |
| CCATCAGGTAGACGTTTAGA+AGG | 0.443237 | 1_2:-51449294 | None:intergenic |
| ATCGGCGGCGAAGGTGTGTA+AGG | 0.445828 | 1_2:+51445815 | Msa0075840:CDS |
| AAATACTCTTGTATGAACTA+TGG | 0.446962 | 1_2:+51449952 | Msa0075840:three_prime_UTR |
| ATTGATTCGAGCGGTTTGCC+GGG | 0.457271 | 1_2:+51445744 | Msa0075840:CDS |
| GTCAACCACCGTCGAATCTC+CGG | 0.463535 | 1_2:+51445571 | Msa0075840:CDS |
| GAAGCTTAGGGTTCCGATGA+AGG | 0.464860 | 1_2:+51445884 | Msa0075840:CDS |
| GTTGCTTCAGTGCCCCACTT+TGG | 0.468923 | 1_2:+51448950 | Msa0075840:CDS |
| TTTAAAGAAACTCAGTTTGT+GGG | 0.470137 | 1_2:+51448634 | Msa0075840:CDS |
| TGGAAGGTTGTTCTAATCTA+GGG | 0.472778 | 1_2:+51447045 | Msa0075840:CDS |
| GACCTCATAACTATGATTGA+AGG | 0.473186 | 1_2:+51447321 | Msa0075840:CDS |
| ATAACTATGATTGAAGGATT+GGG | 0.473642 | 1_2:+51447327 | Msa0075840:CDS |
| GTCTACCTGATGGCTCCAAA+AGG | 0.478330 | 1_2:+51449304 | Msa0075840:CDS |
| CATCTAGTTTGTCTACACTT+TGG | 0.481025 | 1_2:+51447084 | Msa0075840:CDS |
| CCGCCACCAATCGGATCAAT+GGG | 0.483382 | 1_2:+51446440 | Msa0075840:CDS |
| TCAATCTCCACATCTAGATC+TGG | 0.486325 | 1_2:-51445726 | None:intergenic |
| TTTCATCAGTGGTTGGATCT+GGG | 0.495019 | 1_2:-51448535 | None:intergenic |
| TTTGTGGGGTTGCACCGGCT+TGG | 0.495778 | 1_2:+51448649 | Msa0075840:CDS |
| CGTGGTGGTGGTGGTTGTGG+TGG | 0.497371 | 1_2:-51445493 | None:intergenic |
| CGAAGGTGTGTAAGGGATGG+AGG | 0.497940 | 1_2:+51445823 | Msa0075840:CDS |
| TTCTGTATGGTGATGAAGGT+GGG | 0.498440 | 1_2:+51449766 | Msa0075840:three_prime_UTR |
| ATCTACCGGCGTGGTGGTGG+TGG | 0.506650 | 1_2:-51445502 | None:intergenic |
| TCTTTGACACCGCCACCAAT+CGG | 0.510913 | 1_2:+51446431 | Msa0075840:CDS |
| GGGATTGTTATCGGCGGCGA+AGG | 0.511793 | 1_2:+51445806 | Msa0075840:CDS |
| TTATCCCTTAGCTACCAAAC+AGG | 0.512331 | 1_2:+51449851 | Msa0075840:three_prime_UTR |
| GGTCTTGACGATCGAGGCAC+TGG | 0.513418 | 1_2:+51445612 | Msa0075840:CDS |
| TGAATCTACCGGCGTGGTGG+TGG | 0.515249 | 1_2:-51445505 | None:intergenic |
| CATAGTTATGAGGTCAGTGC+TGG | 0.516035 | 1_2:-51447313 | None:intergenic |
| TCGATGCTGCAGAAATGTCC+TGG | 0.517320 | 1_2:+51445927 | Msa0075840:CDS |
| ATTACCTGTTTGGTAGCTAA+GGG | 0.517417 | 1_2:-51449855 | None:intergenic |
| GACGGAGGAGTTGAAGCTTA+GGG | 0.522111 | 1_2:+51445872 | Msa0075840:CDS |
| GTATGGTGATGAAGGTGGGC+TGG | 0.523128 | 1_2:+51449770 | Msa0075840:three_prime_UTR |
| AATCCAACATGAACCTTCAT+CGG | 0.524369 | 1_2:-51445897 | None:intergenic |
| TATATGCTGTAGATTTGCAC+TGG | 0.525532 | 1_2:-51448582 | None:intergenic |
| GTTTAAAGAAACTCAGTTTG+TGG | 0.528026 | 1_2:+51448633 | Msa0075840:CDS |
| AGTCGAGGCTATCCAAAGTC+AGG | 0.528185 | 1_2:+51449007 | Msa0075840:CDS |
| TTGAGGAGGTTACCGCCGGC+GGG | 0.528416 | 1_2:+51445786 | Msa0075840:CDS |
| CCCATTGATCCGATTGGTGG+CGG | 0.529128 | 1_2:-51446440 | None:intergenic |
| TTTGGTGATGGTGATGGAGA+TGG | 0.530866 | 1_2:+51445666 | Msa0075840:CDS |
| GCCGGGGAATTTACGGTGGG+AGG | 0.530866 | 1_2:+51445761 | Msa0075840:CDS |
| TGGGAAATTAGGATCACATA+TGG | 0.540618 | 1_2:-51448516 | None:intergenic |
| CACAACCACCACCACCACGC+CGG | 0.541400 | 1_2:+51445497 | Msa0075840:CDS |
| ATCCTTCAATCATAGTTATG+AGG | 0.542576 | 1_2:-51447323 | None:intergenic |
| AAACCTCAAAAGCCTCAAGA+TGG | 0.542982 | 1_2:+51447025 | Msa0075840:CDS |
| GGGAGACGGCGAGGAAGCTG+TGG | 0.544858 | 1_2:+51445844 | Msa0075840:CDS |
| ATGAGATACAGTTTCATCTA+GGG | 0.546711 | 1_2:-51449908 | None:intergenic |
| TCTGCACTCTCTGTCTAAGA+TGG | 0.548470 | 1_2:+51447115 | Msa0075840:CDS |
| ACCTCCCACCGTAAATTCCC+CGG | 0.549028 | 1_2:-51445762 | None:intergenic |
| GGCGAATGGTTATCTATAGT+AGG | 0.550869 | 1_2:-51449273 | None:intergenic |
| ATATAATGCAGGGATGAACT+AGG | 0.553532 | 1_2:+51446981 | Msa0075840:intron |
| GTGTAAGGGATGGAGGGAGA+CGG | 0.554978 | 1_2:+51445830 | Msa0075840:CDS |
| TTTGAGGAGGTTACCGCCGG+CGG | 0.555516 | 1_2:+51445785 | Msa0075840:CDS |
| CCAACCACTGATGAAAATGA+TGG | 0.557952 | 1_2:+51448542 | Msa0075840:CDS |
| AGCGCTCGCCGGAGATTCGA+CGG | 0.559630 | 1_2:-51445579 | None:intergenic |
| AGCGAAAGCCTCAAAATCCC+AGG | 0.560281 | 1_2:-51445945 | None:intergenic |
| TAGAACAACCTTCCATCTTG+AGG | 0.561903 | 1_2:-51447037 | None:intergenic |
| GGCTTTCGCTTAGAATGGAA+AGG | 0.562043 | 1_2:+51445958 | Msa0075840:CDS |
| GCACTGGACTTGATCTGTTG+AGG | 0.563835 | 1_2:+51445628 | Msa0075840:CDS |
| GACGATAAAGCGTTTGGTGA+TGG | 0.566160 | 1_2:+51445654 | Msa0075840:CDS |
| TCTACCTGATGGCTCCAAAA+GGG | 0.566567 | 1_2:+51449305 | Msa0075840:CDS |
| CTCTAGATTTGGATAGCTTG+AGG | 0.571915 | 1_2:-51448010 | None:intergenic |
| CGATGCTGCAGAAATGTCCT+GGG | 0.572129 | 1_2:+51445928 | Msa0075840:CDS |
| CGTCAAACGAAAGCGCTCGC+CGG | 0.573225 | 1_2:-51445590 | None:intergenic |
| TTGTCAGGATTTGTTAGTCG+AGG | 0.573290 | 1_2:+51448992 | Msa0075840:CDS |
| TAGAGTTGCTTGACCTCAGT+GGG | 0.573574 | 1_2:+51448028 | Msa0075840:CDS |
| CCTTCTAAACGTCTACCTGA+TGG | 0.573862 | 1_2:+51449294 | Msa0075840:CDS |
| TCCTTATTTACTTAGTGGCG+AGG | 0.573887 | 1_2:+51449335 | Msa0075840:CDS |
| TCACATTAGGGCAAAGAGCA+AGG | 0.574084 | 1_2:-51448336 | None:intergenic |
| GATGGTGATGGAGATGGAGA+TGG | 0.574313 | 1_2:+51445672 | Msa0075840:CDS |
| CGGCGAAGGTGTGTAAGGGA+TGG | 0.576084 | 1_2:+51445820 | Msa0075840:CDS |
| AAAGCGTTTGGTGATGGTGA+TGG | 0.580418 | 1_2:+51445660 | Msa0075840:CDS |
| GTAATACCCATTGATCCGAT+TGG | 0.582458 | 1_2:-51446446 | None:intergenic |
| GAAGGTGTGTAAGGGATGGA+GGG | 0.586174 | 1_2:+51445824 | Msa0075840:CDS |
| CGATGAATCTACCGGCGTGG+TGG | 0.586581 | 1_2:-51445508 | None:intergenic |
| CTCAAAAGCCTCAAGATGGA+AGG | 0.589378 | 1_2:+51447029 | Msa0075840:CDS |
| ATACCCATTGATCCGATTGG+TGG | 0.594827 | 1_2:-51446443 | None:intergenic |
| TATCGTTTCTGTACCGTCTG+CGG | 0.597284 | 1_2:+51445536 | Msa0075840:CDS |
| CAGTCCATAAGTTCAAGAAG+TGG | 0.599028 | 1_2:-51448485 | None:intergenic |
| GTTCCGATGAAGGTTCATGT+TGG | 0.602927 | 1_2:+51445894 | Msa0075840:CDS |
| GTTTGCCGGGGAATTTACGG+TGG | 0.606443 | 1_2:+51445757 | Msa0075840:CDS |
| AAACGTGGTAGTTACAATTG+TGG | 0.606563 | 1_2:+51445417 | Msa0075840:CDS |
| CAGTCCACGAGCACATTACA+CGG | 0.607907 | 1_2:-51449718 | None:intergenic |
| TTGATTCGAGCGGTTTGCCG+GGG | 0.608114 | 1_2:+51445745 | Msa0075840:CDS |
| AATTGCAGCAACAGATGCAT+CGG | 0.609470 | 1_2:-51447986 | None:intergenic |
| AGGGATGGAGGGAGACGGCG+AGG | 0.611493 | 1_2:+51445835 | Msa0075840:CDS |
| GCCGCGTCGCAATCTTCACG+CGG | 0.616141 | 1_2:+51445354 | Msa0075840:CDS |
| CGAATCACCGAGACCGCAGA+CGG | 0.619376 | 1_2:-51445549 | None:intergenic |
| ATTGAAACTCACATCCAAGC+CGG | 0.620954 | 1_2:-51448663 | None:intergenic |
| GCCGATAACAATCCCGCCGG+CGG | 0.621466 | 1_2:-51445798 | None:intergenic |
| ACTTCCGTGTAATGTGCTCG+TGG | 0.625760 | 1_2:+51449714 | Msa0075840:CDS |
| TTAAAGAAACTCAGTTTGTG+GGG | 0.625994 | 1_2:+51448635 | Msa0075840:CDS |
| TTTGCCGGGGAATTTACGGT+GGG | 0.626036 | 1_2:+51445758 | Msa0075840:CDS |
| TCGGCGGCGAAGGTGTGTAA+GGG | 0.627171 | 1_2:+51445816 | Msa0075840:CDS |
| GAGGAAGCTGTGGAAAGCGA+CGG | 0.628768 | 1_2:+51445854 | Msa0075840:CDS |
| GCCGCCGATAACAATCCCGC+CGG | 0.629360 | 1_2:-51445801 | None:intergenic |
| GCGTGAAGATTGCGACGCGG+CGG | 0.630010 | 1_2:-51445352 | None:intergenic |
| GGAAGGTTGTTCTAATCTAG+GGG | 0.635613 | 1_2:+51447046 | Msa0075840:CDS |
| AGTTACAATTGTGGACGTTG+TGG | 0.636586 | 1_2:+51445426 | Msa0075840:CDS |
| GTAGACGTTTAGAAGGCGAA+TGG | 0.637230 | 1_2:-51449287 | None:intergenic |
| TCTAGAACCAGATCTAGATG+TGG | 0.637574 | 1_2:+51445719 | Msa0075840:CDS |
| TTTCTGTATGGTGATGAAGG+TGG | 0.640839 | 1_2:+51449765 | Msa0075840:three_prime_UTR |
| CTTCTTGAACTTATGGACTG+TGG | 0.641932 | 1_2:+51448488 | Msa0075840:CDS |
| ATAGATAACGATGAATCTAC+CGG | 0.642583 | 1_2:-51445516 | None:intergenic |
| AGTGAAATCTCTCTCAGCTG+CGG | 0.645007 | 1_2:-51447267 | None:intergenic |
| CTAGAGTTGCTTGACCTCAG+TGG | 0.647313 | 1_2:+51448027 | Msa0075840:CDS |
| GAAGCTGTGGAAAGCGACGG+AGG | 0.650091 | 1_2:+51445857 | Msa0075840:CDS |
| GAAGGTTGTTCTAATCTAGG+GGG | 0.651856 | 1_2:+51447047 | Msa0075840:CDS |
| TTTGACGGTCTTGACGATCG+AGG | 0.668066 | 1_2:+51445606 | Msa0075840:CDS |
| TAGACAAACTAGATGAAGTG+AGG | 0.676299 | 1_2:-51447076 | None:intergenic |
| GCCGGCGGGATTGTTATCGG+CGG | 0.681604 | 1_2:+51445800 | Msa0075840:CDS |
| GCCGCGTGAAGATTGCGACG+CGG | 0.689777 | 1_2:-51445355 | None:intergenic |
| GCGTCGCAATCTTCACGCGG+CGG | 0.696177 | 1_2:+51445357 | Msa0075840:CDS |
| TAACGATGAATCTACCGGCG+TGG | 0.708007 | 1_2:-51445511 | None:intergenic |
| AGATCTGGCATAAGTGACAG+CGG | 0.711325 | 1_2:+51448265 | Msa0075840:intron |
| GCTCGCCGGAGATTCGACGG+TGG | 0.736622 | 1_2:-51445576 | None:intergenic |
| GATGTGGAGATTGATTCGAG+CGG | 0.746668 | 1_2:+51445735 | Msa0075840:CDS |
| ACATCCATATAGCTTCAATG+CGG | 0.786151 | 1_2:+51447373 | Msa0075840:CDS |
| GTACAGATTCATACCCACTG+AGG | 0.831236 | 1_2:-51448041 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTCAATTTATTAATTAAT+TGG | + | chr1_2:51446157-51446176 | Msa0075840:intron | 10.0% |
| !! | AATTTATTAATTAATTGGTT+TGG | + | chr1_2:51446162-51446181 | Msa0075840:intron | 10.0% |
| !!! | AAAAAAGAATATGTTTTAAA+TGG | - | chr1_2:51448705-51448724 | None:intergenic | 10.0% |
| !!! | GATTATTTTCATTTATTAAT+TGG | + | chr1_2:51448915-51448934 | Msa0075840:intron | 10.0% |
| !! | CTAATTTAATCATGAATTAA+TGG | + | chr1_2:51446041-51446060 | Msa0075840:intron | 15.0% |
| !! | TTAAAAACATTTATAACAGA+TGG | - | chr1_2:51447515-51447534 | None:intergenic | 15.0% |
| !! | TATACACACTAATAAAAATT+AGG | + | chr1_2:51447688-51447707 | Msa0075840:intron | 15.0% |
| !! | TAAAGGTTATATATTTATCA+TGG | + | chr1_2:51447781-51447800 | Msa0075840:intron | 15.0% |
| !! | AAAGGTTATATATTTATCAT+GGG | + | chr1_2:51447782-51447801 | Msa0075840:intron | 15.0% |
| !!! | TTTTGAAAATGTATTTAACT+TGG | + | chr1_2:51448096-51448115 | Msa0075840:intron | 15.0% |
| !!! | AATCAATCATACAATTTTAA+AGG | - | chr1_2:51448899-51448918 | None:intergenic | 15.0% |
| !!! | GAACATTGATTTATTAATTA+TGG | - | chr1_2:51449072-51449091 | None:intergenic | 15.0% |
| !! | TTTCACATTCAAAATATAAT+TGG | - | chr1_2:51449617-51449636 | None:intergenic | 15.0% |
| !! | AAAAATTAGAAAAGTTTCAA+GGG | - | chr1_2:51449748-51449767 | None:intergenic | 15.0% |
| !!! | AGGTAATAATTTTTCAATTT+AGG | + | chr1_2:51449871-51449890 | Msa0075840:three_prime_UTR | 15.0% |
| !!! | ACTTTATTTCATTAAAAATG+AGG | - | chr1_2:51449992-51450011 | None:intergenic | 15.0% |
| !!! | TTTCTTTCCTTTTTTTGTAT+CGG | - | chr1_2:51445400-51445419 | None:intergenic | 20.0% |
| !! | AATTAATCTTATTCTTAACG+TGG | - | chr1_2:51446001-51446020 | None:intergenic | 20.0% |
| !!! | TTAATTGGTTTGGTTATAAA+AGG | + | chr1_2:51446172-51446191 | Msa0075840:intron | 20.0% |
| !! | ACATAGAAACAACAAAAAAA+GGG | - | chr1_2:51446500-51446519 | None:intergenic | 20.0% |
| !! | ATTTATACAATGTGAAAATG+AGG | + | chr1_2:51446577-51446596 | Msa0075840:intron | 20.0% |
| !!! | AACCAATTCTTTTAAATTGT+AGG | + | chr1_2:51447233-51447252 | Msa0075840:intron | 20.0% |
| !! | TACCTACAATTTAAAAGAAT+TGG | - | chr1_2:51447238-51447257 | None:intergenic | 20.0% |
| !! | AGCATTGTAGTTATAATAAT+TGG | - | chr1_2:51447661-51447680 | None:intergenic | 20.0% |
| !! | AAGGTTATATATTTATCATG+GGG | + | chr1_2:51447783-51447802 | Msa0075840:intron | 20.0% |
| !! | TCCAAATATACAATTAATCA+GGG | + | chr1_2:51447924-51447943 | Msa0075840:intron | 20.0% |
| !! | AACTTAAAGTCAATTAGAAT+CGG | - | chr1_2:51448066-51448085 | None:intergenic | 20.0% |
| !! | TTTAAGAAATCAAGTTTGAT+GGG | + | chr1_2:51448226-51448245 | Msa0075840:intron | 20.0% |
| !!! | TAAGTTTTGTGAAATAATTG+AGG | - | chr1_2:51448385-51448404 | None:intergenic | 20.0% |
| !!! | TTCTTTTCAAATTTATATGC+AGG | + | chr1_2:51448744-51448763 | Msa0075840:intron | 20.0% |
| !!! | TTATTTGATAGTTACAAAAC+AGG | - | chr1_2:51448853-51448872 | None:intergenic | 20.0% |
| !!! | GTATATTTTAAATTAGAACC+AGG | - | chr1_2:51449220-51449239 | None:intergenic | 20.0% |
| !!! | AGGAAAAATTGTATTTTCTA+GGG | + | chr1_2:51449546-51449565 | Msa0075840:intron | 20.0% |
| !! | GAAAAATTAGAAAAGTTTCA+AGG | - | chr1_2:51449749-51449768 | None:intergenic | 20.0% |
| !!! | ACTTTTCTAATTTTTCTGTA+TGG | + | chr1_2:51449753-51449772 | Msa0075840:three_prime_UTR | 20.0% |
| !! | TTGAAAAATTATTACCTGTT+TGG | - | chr1_2:51449868-51449887 | None:intergenic | 20.0% |
| !!! | TTACAGTTATGTCCTTTTTT+GGG | - | chr1_2:51445456-51445475 | None:intergenic | 25.0% |
| !!! | ATTACAGTTATGTCCTTTTT+TGG | - | chr1_2:51445457-51445476 | None:intergenic | 25.0% |
| ! | AAAAGGACGATGAAAAAAAT+TGG | + | chr1_2:51446189-51446208 | Msa0075840:intron | 25.0% |
| ! | CACATAGAAACAACAAAAAA+AGG | - | chr1_2:51446501-51446520 | None:intergenic | 25.0% |
| !! | TTCTATGTGTAATGAGTTTT+CGG | + | chr1_2:51446512-51446531 | Msa0075840:intron | 25.0% |
| ! | TCTAAGTATGCAATTAATGT+TGG | + | chr1_2:51446545-51446564 | Msa0075840:intron | 25.0% |
| ! | CAAAGTTACAATCTATAACA+TGG | - | chr1_2:51446754-51446773 | None:intergenic | 25.0% |
| ! | AACGAAATAAAACAGAAATC+TGG | - | chr1_2:51446845-51446864 | None:intergenic | 25.0% |
| ! | ACATTATTAGCATATATGCA+AGG | + | chr1_2:51446904-51446923 | Msa0075840:intron | 25.0% |
| ! | ACATTAAAGACAACAAAGAA+AGG | - | chr1_2:51447150-51447169 | None:intergenic | 25.0% |
| ! | ATAACTATGATTGAAGGATT+GGG | + | chr1_2:51447327-51447346 | Msa0075840:CDS | 25.0% |
| ! | ACAATAAATTGCCAAAGAAA+AGG | - | chr1_2:51447448-51447467 | None:intergenic | 25.0% |
| ! | TTTCGGATATTCATAACTTT+GGG | - | chr1_2:51447738-51447757 | None:intergenic | 25.0% |
| ! | ATTTCGGATATTCATAACTT+TGG | - | chr1_2:51447739-51447758 | None:intergenic | 25.0% |
| ! | ATTAATATCTTCAACTGAGT+GGG | - | chr1_2:51447895-51447914 | None:intergenic | 25.0% |
| ! | GTCCAAATATACAATTAATC+AGG | + | chr1_2:51447923-51447942 | Msa0075840:intron | 25.0% |
| ! | CCAAATATACAATTAATCAG+GGG | + | chr1_2:51447925-51447944 | Msa0075840:intron | 25.0% |
| ! | CAAATATACAATTAATCAGG+GGG | + | chr1_2:51447926-51447945 | Msa0075840:intron | 25.0% |
| ! | CTTCGATTGTAATTTATCTA+TGG | - | chr1_2:51448151-51448170 | None:intergenic | 25.0% |
| ! | TTGATTTCTTAAACAAAGAC+AGG | - | chr1_2:51448219-51448238 | None:intergenic | 25.0% |
| ! | GTTTAAGAAATCAAGTTTGA+TGG | + | chr1_2:51448225-51448244 | Msa0075840:intron | 25.0% |
| ! | ACAAACTGAGTTTCTTTAAA+CGG | - | chr1_2:51448634-51448653 | None:intergenic | 25.0% |
| ! | TTTAAAGAAACTCAGTTTGT+GGG | + | chr1_2:51448634-51448653 | Msa0075840:CDS | 25.0% |
| ! | TACAAAACAGGAATACAAAA+GGG | - | chr1_2:51448841-51448860 | None:intergenic | 25.0% |
| ! | TTACAAAACAGGAATACAAA+AGG | - | chr1_2:51448842-51448861 | None:intergenic | 25.0% |
| !! | ATTTATTAATTGGTTCAGAG+AGG | + | chr1_2:51448925-51448944 | Msa0075840:intron | 25.0% |
| ! | GTTTGTTTGATATTTATTCC+AGG | + | chr1_2:51449190-51449209 | Msa0075840:intron | 25.0% |
| !!! | ATACTTATTGATTTGTTTGC+AGG | + | chr1_2:51449236-51449255 | Msa0075840:intron | 25.0% |
| ! | AAACCATATTGTGTTTATCT+AGG | + | chr1_2:51449392-51449411 | Msa0075840:intron | 25.0% |
| !! | AAAATACAATTTTTCCTCTG+TGG | - | chr1_2:51449543-51449562 | None:intergenic | 25.0% |
| !! | GAGGAAAAATTGTATTTTCT+AGG | + | chr1_2:51449545-51449564 | Msa0075840:intron | 25.0% |
| ! | AAATACTCTTGTATGAACTA+TGG | + | chr1_2:51449952-51449971 | Msa0075840:three_prime_UTR | 25.0% |
| !!! | TTTTTTTGTATCGGAGCTTT+CGG | - | chr1_2:51445391-51445410 | None:intergenic | 30.0% |
| ACAAAAAAAGGAAAGAAACG+TGG | + | chr1_2:51445402-51445421 | Msa0075840:CDS | 30.0% | |
| ATAGATAACGATGAATCTAC+CGG | - | chr1_2:51445519-51445538 | None:intergenic | 30.0% | |
| AGATCGATGCACAAAAAAAT+CGG | + | chr1_2:51446124-51446143 | Msa0075840:intron | 30.0% | |
| TAACACGGATCTAAAAATCT+AGG | - | chr1_2:51446654-51446673 | None:intergenic | 30.0% | |
| CCAATTAACAATGTCTAACA+CGG | - | chr1_2:51446669-51446688 | None:intergenic | 30.0% | |
| CTGAAACTTAAATCTTCCAT+GGG | - | chr1_2:51446810-51446829 | None:intergenic | 30.0% | |
| ! | TCTGAAACTTAAATCTTCCA+TGG | - | chr1_2:51446811-51446830 | None:intergenic | 30.0% |
| GAAATAAAACAGAAATCTGG+AGG | - | chr1_2:51446842-51446861 | None:intergenic | 30.0% | |
| TTCGACTATGATATAATGCA+GGG | + | chr1_2:51446971-51446990 | Msa0075840:intron | 30.0% | |
| ! | TTCTTTTGTCAGCAACAAAT+CGG | - | chr1_2:51447007-51447026 | None:intergenic | 30.0% |
| TCAATATGAATGCAATCTCA+GGG | - | chr1_2:51447201-51447220 | None:intergenic | 30.0% | |
| TTCAATATGAATGCAATCTC+AGG | - | chr1_2:51447202-51447221 | None:intergenic | 30.0% | |
| AAAAGAATTGGTTAGCAACT+AGG | - | chr1_2:51447226-51447245 | None:intergenic | 30.0% | |
| ATCCTTCAATCATAGTTATG+AGG | - | chr1_2:51447326-51447345 | None:intergenic | 30.0% | |
| CATAACTATGATTGAAGGAT+TGG | + | chr1_2:51447326-51447345 | Msa0075840:CDS | 30.0% | |
| ! | GTCTGTTTTCATGTTGTTAT+TGG | + | chr1_2:51447466-51447485 | Msa0075840:intron | 30.0% |
| !! | CTATGTTTGGTCTTTTACAA+TGG | - | chr1_2:51447581-51447600 | None:intergenic | 30.0% |
| CATTGTAAAAGACCAAACAT+AGG | + | chr1_2:51447579-51447598 | Msa0075840:intron | 30.0% | |
| ATTCAACATGATCCTATGTT+TGG | - | chr1_2:51447594-51447613 | None:intergenic | 30.0% | |
| CATTAATATCTTCAACTGAG+TGG | - | chr1_2:51447896-51447915 | None:intergenic | 30.0% | |
| CCCCTGATTAATTGTATATT+TGG | - | chr1_2:51447928-51447947 | None:intergenic | 30.0% | |
| !! | GAAGTCTTTTAAGTGTTTCA+GGG | - | chr1_2:51448315-51448334 | None:intergenic | 30.0% |
| !! | AGAAGTCTTTTAAGTGTTTC+AGG | - | chr1_2:51448316-51448335 | None:intergenic | 30.0% |
| GATTACTTGAAGTCACATTA+GGG | - | chr1_2:51448351-51448370 | None:intergenic | 30.0% | |
| AGATTACTTGAAGTCACATT+AGG | - | chr1_2:51448352-51448371 | None:intergenic | 30.0% | |
| !!! | TATGTTTGACGATTAGCTTT+TGG | - | chr1_2:51448610-51448629 | None:intergenic | 30.0% |
| GTTTAAAGAAACTCAGTTTG+TGG | + | chr1_2:51448633-51448652 | Msa0075840:CDS | 30.0% | |
| TTAAAGAAACTCAGTTTGTG+GGG | + | chr1_2:51448635-51448654 | Msa0075840:CDS | 30.0% | |
| !! | ATAATTTGTTGCAACTTACC+AGG | + | chr1_2:51448869-51448888 | Msa0075840:intron | 30.0% |
| !! | TACAATTTTAAAGGAAGTCC+TGG | - | chr1_2:51448890-51448909 | None:intergenic | 30.0% |
| GAACACTACTTAAACATGAA+AGG | - | chr1_2:51449050-51449069 | None:intergenic | 30.0% | |
| TCTTGTTCTTCATATCTACA+AGG | - | chr1_2:51449121-51449140 | None:intergenic | 30.0% | |
| TGCAGAGAAAATTAGTTCAA+GGG | - | chr1_2:51449145-51449164 | None:intergenic | 30.0% | |
| ATGCAGAGAAAATTAGTTCA+AGG | - | chr1_2:51449146-51449165 | None:intergenic | 30.0% | |
| CTATAGTAGGAAAAACATTG+CGG | - | chr1_2:51449263-51449282 | None:intergenic | 30.0% | |
| CATCCTAGATAAACACAATA+TGG | - | chr1_2:51449398-51449417 | None:intergenic | 30.0% | |
| CATATTGTGTTTATCTAGGA+TGG | + | chr1_2:51449396-51449415 | Msa0075840:intron | 30.0% | |
| AAAGTAAGTTTGTGCATCAA+TGG | + | chr1_2:51449468-51449487 | Msa0075840:intron | 30.0% | |
| !! | ATTTTTCTGTATGGTGATGA+AGG | + | chr1_2:51449762-51449781 | Msa0075840:three_prime_UTR | 30.0% |
| ATGAGATACAGTTTCATCTA+GGG | - | chr1_2:51449911-51449930 | None:intergenic | 30.0% | |
| GAAAGCTCCGATACAAAAAA+AGG | + | chr1_2:51445390-51445409 | Msa0075840:CDS | 35.0% | |
| AAACGTGGTAGTTACAATTG+TGG | + | chr1_2:51445417-51445436 | Msa0075840:CDS | 35.0% | |
| !!! | AGTTATGTCCTTTTTTGGGA+AGG | - | chr1_2:51445452-51445471 | None:intergenic | 35.0% |
| AATCCAACATGAACCTTCAT+CGG | - | chr1_2:51445900-51445919 | None:intergenic | 35.0% | |
| TCTTATTCTTAACGTGGATC+TGG | - | chr1_2:51445995-51446014 | None:intergenic | 35.0% | |
| !!! | TGATTTTGATTCAACGATGC+TGG | + | chr1_2:51446360-51446379 | Msa0075840:CDS | 35.0% |
| TCTCCATAGATTCCAGATTA+GGG | - | chr1_2:51446405-51446424 | None:intergenic | 35.0% | |
| ATCTCCATAGATTCCAGATT+AGG | - | chr1_2:51446406-51446425 | None:intergenic | 35.0% | |
| CCGTGTTAGACATTGTTAAT+TGG | + | chr1_2:51446666-51446685 | Msa0075840:intron | 35.0% | |
| GTTCGACTATGATATAATGC+AGG | + | chr1_2:51446970-51446989 | Msa0075840:intron | 35.0% | |
| ATATAATGCAGGGATGAACT+AGG | + | chr1_2:51446981-51447000 | Msa0075840:intron | 35.0% | |
| ATGGAAGGTTGTTCTAATCT+AGG | + | chr1_2:51447044-51447063 | Msa0075840:CDS | 35.0% | |
| TGGAAGGTTGTTCTAATCTA+GGG | + | chr1_2:51447045-51447064 | Msa0075840:CDS | 35.0% | |
| TAGACAAACTAGATGAAGTG+AGG | - | chr1_2:51447079-51447098 | None:intergenic | 35.0% | |
| ! | CATCTAGTTTGTCTACACTT+TGG | + | chr1_2:51447084-51447103 | Msa0075840:CDS | 35.0% |
| GACCTCATAACTATGATTGA+AGG | + | chr1_2:51447321-51447340 | Msa0075840:CDS | 35.0% | |
| ACATCCATATAGCTTCAATG+CGG | + | chr1_2:51447373-51447392 | Msa0075840:CDS | 35.0% | |
| ! | ATTGAGGTTTGCCTTTTCTT+TGG | + | chr1_2:51447434-51447453 | Msa0075840:intron | 35.0% |
| AGATGGAATTTCAACACATG+TGG | - | chr1_2:51447498-51447517 | None:intergenic | 35.0% | |
| !! | GTTTGGTCTTTTACAATGGT+TGG | - | chr1_2:51447577-51447596 | None:intergenic | 35.0% |
| TATTTCACAGACACCTCATT+TGG | - | chr1_2:51447630-51447649 | None:intergenic | 35.0% | |
| CAGTTAAAGGATCGGAATTT+CGG | - | chr1_2:51447755-51447774 | None:intergenic | 35.0% | |
| AATTCCGATCCTTTAACTGT+TGG | + | chr1_2:51447756-51447775 | Msa0075840:intron | 35.0% | |
| TAGTCCAACAGTTAAAGGAT+CGG | - | chr1_2:51447763-51447782 | None:intergenic | 35.0% | |
| TCCTTTAACTGTTGGACTAA+AGG | + | chr1_2:51447764-51447783 | Msa0075840:intron | 35.0% | |
| ACCTTTAGTCCAACAGTTAA+AGG | - | chr1_2:51447768-51447787 | None:intergenic | 35.0% | |
| TATTTATCATGGGGATCTCA+TGG | + | chr1_2:51447792-51447811 | Msa0075840:intron | 35.0% | |
| ! | ATTGCCACTTCTTGAACTTA+TGG | + | chr1_2:51448481-51448500 | Msa0075840:CDS | 35.0% |
| TGGGAAATTAGGATCACATA+TGG | - | chr1_2:51448519-51448538 | None:intergenic | 35.0% | |
| ! | TTTGCCATCATTTTCATCAG+TGG | - | chr1_2:51448549-51448568 | None:intergenic | 35.0% |
| TATATGCTGTAGATTTGCAC+TGG | - | chr1_2:51448585-51448604 | None:intergenic | 35.0% | |
| TTCTGGGCAGTTTAAGTATA+GGG | - | chr1_2:51448770-51448789 | None:intergenic | 35.0% | |
| GATTCAGATCATTGAGTTCT+GGG | - | chr1_2:51448786-51448805 | None:intergenic | 35.0% | |
| AGATTCAGATCATTGAGTTC+TGG | - | chr1_2:51448787-51448806 | None:intergenic | 35.0% | |
| ! | CATGAACATTTTCCAAAGTG+GGG | - | chr1_2:51448965-51448984 | None:intergenic | 35.0% |
| ! | GCATGAACATTTTCCAAAGT+GGG | - | chr1_2:51448966-51448985 | None:intergenic | 35.0% |
| ! | TGCATGAACATTTTCCAAAG+TGG | - | chr1_2:51448967-51448986 | None:intergenic | 35.0% |
| TTGGAAAATGTTCATGCATC+AGG | + | chr1_2:51448969-51448988 | Msa0075840:CDS | 35.0% | |
| ATATTTATTCCAGGCTTTCC+TGG | + | chr1_2:51449199-51449218 | Msa0075840:intron | 35.0% | |
| ! | ATACAATTTTTCCTCTGTGG+AGG | - | chr1_2:51449540-51449559 | None:intergenic | 35.0% |
| !!! | TTCGCTTTTTTTCAGGTTCA+GGG | - | chr1_2:51449681-51449700 | None:intergenic | 35.0% |
| ! | ATTACCTGTTTGGTAGCTAA+GGG | - | chr1_2:51449858-51449877 | None:intergenic | 35.0% |
| ! | TATTACCTGTTTGGTAGCTA+AGG | - | chr1_2:51449859-51449878 | None:intergenic | 35.0% |
| TTCAATTTAGGCTCTCAAAC+TGG | + | chr1_2:51449883-51449902 | Msa0075840:three_prime_UTR | 35.0% | |
| GATGAGATACAGTTTCATCT+AGG | - | chr1_2:51449912-51449931 | None:intergenic | 35.0% | |
| CTTGTATGAACTATGGTCTA+TGG | + | chr1_2:51449959-51449978 | Msa0075840:three_prime_UTR | 35.0% | |
| AGTTACAATTGTGGACGTTG+TGG | + | chr1_2:51445426-51445445 | Msa0075840:CDS | 40.0% | |
| AGATGGAGATGGAGATTTGT+TGG | + | chr1_2:51445683-51445702 | Msa0075840:CDS | 40.0% | |
| !! | AGATGGAGATTTGTTGGATC+TGG | + | chr1_2:51445689-51445708 | Msa0075840:CDS | 40.0% |
| ! | TCTAGAACCAGATCTAGATG+TGG | + | chr1_2:51445719-51445738 | Msa0075840:CDS | 40.0% |
| TCAATCTCCACATCTAGATC+TGG | - | chr1_2:51445729-51445748 | None:intergenic | 40.0% | |
| ! | AGAAATGTCCTGGGATTTTG+AGG | + | chr1_2:51445937-51445956 | Msa0075840:CDS | 40.0% |
| ! | TTTGAGGCTTTCGCTTAGAA+TGG | + | chr1_2:51445953-51445972 | Msa0075840:CDS | 40.0% |
| !!! | TGCTTTTTCATGCCCTAATC+TGG | + | chr1_2:51446390-51446409 | Msa0075840:CDS | 40.0% |
| ! | ATGCCCTAATCTGGAATCTA+TGG | + | chr1_2:51446399-51446418 | Msa0075840:CDS | 40.0% |
| GTAATACCCATTGATCCGAT+TGG | - | chr1_2:51446449-51446468 | None:intergenic | 40.0% | |
| TTCAAATGCCACGATGTAGA+TGG | + | chr1_2:51446706-51446725 | Msa0075840:intron | 40.0% | |
| GTAGATGGATGGAATCTTGA+TGG | + | chr1_2:51446721-51446740 | Msa0075840:intron | 40.0% | |
| !!! | GCAACTTTTGTTTTGTCCCA+TGG | + | chr1_2:51446791-51446810 | Msa0075840:intron | 40.0% |
| AAACCTCAAAAGCCTCAAGA+TGG | + | chr1_2:51447025-51447044 | Msa0075840:CDS | 40.0% | |
| TAGAACAACCTTCCATCTTG+AGG | - | chr1_2:51447040-51447059 | None:intergenic | 40.0% | |
| GGAAGGTTGTTCTAATCTAG+GGG | + | chr1_2:51447046-51447065 | Msa0075840:CDS | 40.0% | |
| GAAGGTTGTTCTAATCTAGG+GGG | + | chr1_2:51447047-51447066 | Msa0075840:CDS | 40.0% | |
| AAAGCCGCATTGAAGCTATA+TGG | - | chr1_2:51447380-51447399 | None:intergenic | 40.0% | |
| TTTATACTGCCTGCCAAATG+AGG | + | chr1_2:51447614-51447633 | Msa0075840:intron | 40.0% | |
| CGAATGCTTTCTCTTGTTCT+TGG | + | chr1_2:51447952-51447971 | Msa0075840:CDS | 40.0% | |
| AATTGCAGCAACAGATGCAT+CGG | - | chr1_2:51447989-51448008 | None:intergenic | 40.0% | |
| CTCTAGATTTGGATAGCTTG+AGG | - | chr1_2:51448013-51448032 | None:intergenic | 40.0% | |
| AGGTCAAGCAACTCTAGATT+TGG | - | chr1_2:51448024-51448043 | None:intergenic | 40.0% | |
| TGCTGTCATAACAACAGATC+TGG | + | chr1_2:51448250-51448269 | Msa0075840:intron | 40.0% | |
| AATCTGCTGACACATGTTTC+AGG | + | chr1_2:51448434-51448453 | Msa0075840:intron | 40.0% | |
| CAGTCCATAAGTTCAAGAAG+TGG | - | chr1_2:51448488-51448507 | None:intergenic | 40.0% | |
| ! | CTTCTTGAACTTATGGACTG+TGG | + | chr1_2:51448488-51448507 | Msa0075840:CDS | 40.0% |
| TTTCATCAGTGGTTGGATCT+GGG | - | chr1_2:51448538-51448557 | None:intergenic | 40.0% | |
| ! | TTTTCATCAGTGGTTGGATC+TGG | - | chr1_2:51448539-51448558 | None:intergenic | 40.0% |
| ! | CCATCATTTTCATCAGTGGT+TGG | - | chr1_2:51448545-51448564 | None:intergenic | 40.0% |
| CCAACCACTGATGAAAATGA+TGG | + | chr1_2:51448542-51448561 | Msa0075840:CDS | 40.0% | |
| ATTGAAACTCACATCCAAGC+CGG | - | chr1_2:51448666-51448685 | None:intergenic | 40.0% | |
| ! | GTTCTGGGCAGTTTAAGTAT+AGG | - | chr1_2:51448771-51448790 | None:intergenic | 40.0% |
| TCTTGCAGAAATCTGCATTC+AGG | + | chr1_2:51448811-51448830 | Msa0075840:CDS | 40.0% | |
| !! | TTGTCAGGATTTGTTAGTCG+AGG | + | chr1_2:51448992-51449011 | Msa0075840:CDS | 40.0% |
| CTGACTTTGTTACCTGACTT+TGG | - | chr1_2:51449022-51449041 | None:intergenic | 40.0% | |
| CAAAGTCAGGTAACAAAGTC+AGG | + | chr1_2:51449020-51449039 | Msa0075840:intron | 40.0% | |
| AAATTAGAACCAGGAAAGCC+TGG | - | chr1_2:51449211-51449230 | None:intergenic | 40.0% | |
| GGCGAATGGTTATCTATAGT+AGG | - | chr1_2:51449276-51449295 | None:intergenic | 40.0% | |
| ! | CGGGTTCCTTATTTACTTAG+TGG | + | chr1_2:51449330-51449349 | Msa0075840:CDS | 40.0% |
| ! | TCCTTATTTACTTAGTGGCG+AGG | + | chr1_2:51449335-51449354 | Msa0075840:CDS | 40.0% |
| ACCTCGCCACTAAGTAAATA+AGG | - | chr1_2:51449339-51449358 | None:intergenic | 40.0% | |
| TGTGTCTTTACTGTGTGAAC+TGG | + | chr1_2:51449502-51449521 | Msa0075840:intron | 40.0% | |
| !!! | TCGCTTTTTTTCAGGTTCAG+GGG | - | chr1_2:51449680-51449699 | None:intergenic | 40.0% |
| !!! | CTTCGCTTTTTTTCAGGTTC+AGG | - | chr1_2:51449682-51449701 | None:intergenic | 40.0% |
| CTGAACCTGAAAAAAAGCGA+AGG | + | chr1_2:51449680-51449699 | Msa0075840:CDS | 40.0% | |
| AACCTGAAAAAAAGCGAAGG+AGG | + | chr1_2:51449683-51449702 | Msa0075840:CDS | 40.0% | |
| !!! | ATCCTCCTTCGCTTTTTTTC+AGG | - | chr1_2:51449688-51449707 | None:intergenic | 40.0% |
| ! | TTTCTGTATGGTGATGAAGG+TGG | + | chr1_2:51449765-51449784 | Msa0075840:three_prime_UTR | 40.0% |
| ! | TTCTGTATGGTGATGAAGGT+GGG | + | chr1_2:51449766-51449785 | Msa0075840:three_prime_UTR | 40.0% |
| TTATCCCTTAGCTACCAAAC+AGG | + | chr1_2:51449851-51449870 | Msa0075840:three_prime_UTR | 40.0% | |
| ! | TTTTGTATCGGAGCTTTCGG+CGG | - | chr1_2:51445388-51445407 | None:intergenic | 45.0% |
| TATCGTTTCTGTACCGTCTG+CGG | + | chr1_2:51445536-51445555 | Msa0075840:CDS | 45.0% | |
| ! | AGGCTTGACGATAAAGCGTT+TGG | + | chr1_2:51445648-51445667 | Msa0075840:CDS | 45.0% |
| ! | GACGATAAAGCGTTTGGTGA+TGG | + | chr1_2:51445654-51445673 | Msa0075840:CDS | 45.0% |
| !! | AAAGCGTTTGGTGATGGTGA+TGG | + | chr1_2:51445660-51445679 | Msa0075840:CDS | 45.0% |
| !! | TTTGGTGATGGTGATGGAGA+TGG | + | chr1_2:51445666-51445685 | Msa0075840:CDS | 45.0% |
| !! | GATGTGGAGATTGATTCGAG+CGG | + | chr1_2:51445735-51445754 | Msa0075840:CDS | 45.0% |
| ! | ATTTACGGTGGGAGGTTTTG+AGG | + | chr1_2:51445769-51445788 | Msa0075840:CDS | 45.0% |
| GTTCCGATGAAGGTTCATGT+TGG | + | chr1_2:51445894-51445913 | Msa0075840:CDS | 45.0% | |
| GGCTTTCGCTTAGAATGGAA+AGG | + | chr1_2:51445958-51445977 | Msa0075840:CDS | 45.0% | |
| ATACCCATTGATCCGATTGG+TGG | - | chr1_2:51446446-51446465 | None:intergenic | 45.0% | |
| AATGCCACGATGTAGATGGA+TGG | + | chr1_2:51446710-51446729 | Msa0075840:intron | 45.0% | |
| GATTCCATCCATCTACATCG+TGG | - | chr1_2:51446717-51446736 | None:intergenic | 45.0% | |
| AACTTTGCCTTCATCAGCAG+AGG | + | chr1_2:51446767-51446786 | Msa0075840:intron | 45.0% | |
| ACTTTGCCTTCATCAGCAGA+GGG | + | chr1_2:51446768-51446787 | Msa0075840:intron | 45.0% | |
| ! | CTTCCATCTTGAGGCTTTTG+AGG | - | chr1_2:51447031-51447050 | None:intergenic | 45.0% |
| CTCAAAAGCCTCAAGATGGA+AGG | + | chr1_2:51447029-51447048 | Msa0075840:CDS | 45.0% | |
| TCTGCACTCTCTGTCTAAGA+TGG | + | chr1_2:51447115-51447134 | Msa0075840:CDS | 45.0% | |
| AGTGAAATCTCTCTCAGCTG+CGG | - | chr1_2:51447270-51447289 | None:intergenic | 45.0% | |
| CATAGTTATGAGGTCAGTGC+TGG | - | chr1_2:51447316-51447335 | None:intergenic | 45.0% | |
| CTCTTACTGCTGCTCAATTG+AGG | + | chr1_2:51447418-51447437 | Msa0075840:CDS | 45.0% | |
| TAGAGTTGCTTGACCTCAGT+GGG | + | chr1_2:51448028-51448047 | Msa0075840:CDS | 45.0% | |
| GTACAGATTCATACCCACTG+AGG | - | chr1_2:51448044-51448063 | None:intergenic | 45.0% | |
| AGATCTGGCATAAGTGACAG+CGG | + | chr1_2:51448265-51448284 | Msa0075840:intron | 45.0% | |
| TCACATTAGGGCAAAGAGCA+AGG | - | chr1_2:51448339-51448358 | None:intergenic | 45.0% | |
| GTGGTTGGATCTGGGAAATT+AGG | - | chr1_2:51448530-51448549 | None:intergenic | 45.0% | |
| ! | TGTTCATGCATCAGGTTGTC+AGG | + | chr1_2:51448977-51448996 | Msa0075840:CDS | 45.0% |
| GTAGACGTTTAGAAGGCGAA+TGG | - | chr1_2:51449290-51449309 | None:intergenic | 45.0% | |
| CCATCAGGTAGACGTTTAGA+AGG | - | chr1_2:51449297-51449316 | None:intergenic | 45.0% | |
| CCTTCTAAACGTCTACCTGA+TGG | + | chr1_2:51449294-51449313 | Msa0075840:CDS | 45.0% | |
| TCTACCTGATGGCTCCAAAA+GGG | + | chr1_2:51449305-51449324 | Msa0075840:CDS | 45.0% | |
| ! | ATAAGGAACCCGAACCCTTT+TGG | - | chr1_2:51449322-51449341 | None:intergenic | 45.0% |
| TTTGTTTCAAGCCTCCACAG+AGG | + | chr1_2:51449526-51449545 | Msa0075840:intron | 45.0% | |
| CGTTGTGGCCTTCCCAAAAA+AGG | + | chr1_2:51445441-51445460 | Msa0075840:CDS | 50.0% | |
| TAACGATGAATCTACCGGCG+TGG | - | chr1_2:51445514-51445533 | None:intergenic | 50.0% | |
| TTTGACGGTCTTGACGATCG+AGG | + | chr1_2:51445606-51445625 | Msa0075840:CDS | 50.0% | |
| GCACTGGACTTGATCTGTTG+AGG | + | chr1_2:51445628-51445647 | Msa0075840:CDS | 50.0% | |
| !! | GATGGTGATGGAGATGGAGA+TGG | + | chr1_2:51445672-51445691 | Msa0075840:CDS | 50.0% |
| !! | GATTGATTCGAGCGGTTTGC+CGG | + | chr1_2:51445743-51445762 | Msa0075840:CDS | 50.0% |
| !! | ATTGATTCGAGCGGTTTGCC+GGG | + | chr1_2:51445744-51445763 | Msa0075840:CDS | 50.0% |
| TTTGCCGGGGAATTTACGGT+GGG | + | chr1_2:51445758-51445777 | Msa0075840:CDS | 50.0% | |
| ! | GAAGGTGTGTAAGGGATGGA+GGG | + | chr1_2:51445824-51445843 | Msa0075840:CDS | 50.0% |
| GACGGAGGAGTTGAAGCTTA+GGG | + | chr1_2:51445872-51445891 | Msa0075840:CDS | 50.0% | |
| GAAGCTTAGGGTTCCGATGA+AGG | + | chr1_2:51445884-51445903 | Msa0075840:CDS | 50.0% | |
| TCGATGCTGCAGAAATGTCC+TGG | + | chr1_2:51445927-51445946 | Msa0075840:CDS | 50.0% | |
| CGATGCTGCAGAAATGTCCT+GGG | + | chr1_2:51445928-51445947 | Msa0075840:CDS | 50.0% | |
| AGCGAAAGCCTCAAAATCCC+AGG | - | chr1_2:51445948-51445967 | None:intergenic | 50.0% | |
| TCTTTGACACCGCCACCAAT+CGG | + | chr1_2:51446431-51446450 | Msa0075840:CDS | 50.0% | |
| CTTTGCCTTCATCAGCAGAG+GGG | + | chr1_2:51446769-51446788 | Msa0075840:intron | 50.0% | |
| ! | TGTAAGCTCTAGCTGCACAC+AGG | - | chr1_2:51446887-51446906 | None:intergenic | 50.0% |
| !!! | GGTCAGTGCTGGCATTTTCT+TGG | - | chr1_2:51447305-51447324 | None:intergenic | 50.0% |
| TCACAGACACCTCATTTGGC+AGG | - | chr1_2:51447626-51447645 | None:intergenic | 50.0% | |
| CTAGAGTTGCTTGACCTCAG+TGG | + | chr1_2:51448027-51448046 | Msa0075840:CDS | 50.0% | |
| ! | TGGAGACAAGAGAAGCGTGA+TGG | + | chr1_2:51448116-51448135 | Msa0075840:intron | 50.0% |
| CTGCTGACACATGTTTCAGG+TGG | + | chr1_2:51448437-51448456 | Msa0075840:intron | 50.0% | |
| AGTCGAGGCTATCCAAAGTC+AGG | + | chr1_2:51449007-51449026 | Msa0075840:CDS | 50.0% | |
| GTCTACCTGATGGCTCCAAA+AGG | + | chr1_2:51449304-51449323 | Msa0075840:CDS | 50.0% | |
| CTGATGGCTCCAAAAGGGTT+CGG | + | chr1_2:51449310-51449329 | Msa0075840:CDS | 50.0% | |
| TGATGGCTCCAAAAGGGTTC+GGG | + | chr1_2:51449311-51449330 | Msa0075840:CDS | 50.0% | |
| ACTTCCGTGTAATGTGCTCG+TGG | + | chr1_2:51449714-51449733 | Msa0075840:CDS | 50.0% | |
| CAGTCCACGAGCACATTACA+CGG | - | chr1_2:51449721-51449740 | None:intergenic | 50.0% | |
| ! | GTGGTGGTTGTGGTGGAAAC+TGG | - | chr1_2:51445489-51445508 | None:intergenic | 55.0% |
| TTCTGTACCGTCTGCGGTCT+CGG | + | chr1_2:51445542-51445561 | Msa0075840:CDS | 55.0% | |
| GTCAACCACCGTCGAATCTC+CGG | + | chr1_2:51445571-51445590 | Msa0075840:CDS | 55.0% | |
| ! | TTGATTCGAGCGGTTTGCCG+GGG | + | chr1_2:51445745-51445764 | Msa0075840:CDS | 55.0% |
| GCGGTTTGCCGGGGAATTTA+CGG | + | chr1_2:51445754-51445773 | Msa0075840:CDS | 55.0% | |
| GTTTGCCGGGGAATTTACGG+TGG | + | chr1_2:51445757-51445776 | Msa0075840:CDS | 55.0% | |
| ACCTCCCACCGTAAATTCCC+CGG | - | chr1_2:51445765-51445784 | None:intergenic | 55.0% | |
| !!! | TACGGTGGGAGGTTTTGAGG+AGG | + | chr1_2:51445772-51445791 | Msa0075840:CDS | 55.0% |
| !!! | GGTTTTGAGGAGGTTACCGC+CGG | + | chr1_2:51445782-51445801 | Msa0075840:CDS | 55.0% |
| ! | CGAAGGTGTGTAAGGGATGG+AGG | + | chr1_2:51445823-51445842 | Msa0075840:CDS | 55.0% |
| GTGTAAGGGATGGAGGGAGA+CGG | + | chr1_2:51445830-51445849 | Msa0075840:CDS | 55.0% | |
| GAGGAAGCTGTGGAAAGCGA+CGG | + | chr1_2:51445854-51445873 | Msa0075840:CDS | 55.0% | |
| CGACGGAGGAGTTGAAGCTT+AGG | + | chr1_2:51445871-51445890 | Msa0075840:CDS | 55.0% | |
| ACCGCCACCAATCGGATCAA+TGG | + | chr1_2:51446439-51446458 | Msa0075840:CDS | 55.0% | |
| CCCATTGATCCGATTGGTGG+CGG | - | chr1_2:51446443-51446462 | None:intergenic | 55.0% | |
| CCGCCACCAATCGGATCAAT+GGG | + | chr1_2:51446440-51446459 | Msa0075840:CDS | 55.0% | |
| AGTTGCCCCTCTGCTGATGA+AGG | - | chr1_2:51446777-51446796 | None:intergenic | 55.0% | |
| ! | GCACACAGGCTTTAGCAGCT+AGG | - | chr1_2:51446873-51446892 | None:intergenic | 55.0% |
| GGCATAAGTGACAGCGGCAT+TGG | + | chr1_2:51448271-51448290 | Msa0075840:CDS | 55.0% | |
| CTCAGTTTGTGGGGTTGCAC+CGG | + | chr1_2:51448644-51448663 | Msa0075840:CDS | 55.0% | |
| GTTGCTTCAGTGCCCCACTT+TGG | + | chr1_2:51448950-51448969 | Msa0075840:CDS | 55.0% | |
| !!! | CGAACCCTTTTGGAGCCATC+AGG | - | chr1_2:51449312-51449331 | None:intergenic | 55.0% |
| ! | GTATGGTGATGAAGGTGGGC+TGG | + | chr1_2:51449770-51449789 | Msa0075840:three_prime_UTR | 55.0% |
| TGAATCTACCGGCGTGGTGG+TGG | - | chr1_2:51445508-51445527 | None:intergenic | 60.0% | |
| CGATGAATCTACCGGCGTGG+TGG | - | chr1_2:51445511-51445530 | None:intergenic | 60.0% | |
| CGAATCACCGAGACCGCAGA+CGG | - | chr1_2:51445552-51445571 | None:intergenic | 60.0% | |
| !! | CGTCAAACGAAAGCGCTCGC+CGG | - | chr1_2:51445593-51445612 | None:intergenic | 60.0% |
| CGGCGAGCGCTTTCGTTTGA+CGG | + | chr1_2:51445591-51445610 | Msa0075840:CDS | 60.0% | |
| GGTCTTGACGATCGAGGCAC+TGG | + | chr1_2:51445612-51445631 | Msa0075840:CDS | 60.0% | |
| TTTGAGGAGGTTACCGCCGG+CGG | + | chr1_2:51445785-51445804 | Msa0075840:CDS | 60.0% | |
| ACCGCCGGCGGGATTGTTAT+CGG | + | chr1_2:51445797-51445816 | Msa0075840:CDS | 60.0% | |
| GGGATTGTTATCGGCGGCGA+AGG | + | chr1_2:51445806-51445825 | Msa0075840:CDS | 60.0% | |
| ! | ATCGGCGGCGAAGGTGTGTA+AGG | + | chr1_2:51445815-51445834 | Msa0075840:CDS | 60.0% |
| ! | TCGGCGGCGAAGGTGTGTAA+GGG | + | chr1_2:51445816-51445835 | Msa0075840:CDS | 60.0% |
| ! | CGGCGAAGGTGTGTAAGGGA+TGG | + | chr1_2:51445820-51445839 | Msa0075840:CDS | 60.0% |
| GAAGCTGTGGAAAGCGACGG+AGG | + | chr1_2:51445857-51445876 | Msa0075840:CDS | 60.0% | |
| !! | TTTGTGGGGTTGCACCGGCT+TGG | + | chr1_2:51448649-51448668 | Msa0075840:CDS | 60.0% |
| GCGTGAAGATTGCGACGCGG+CGG | - | chr1_2:51445355-51445374 | None:intergenic | 65.0% | |
| GCCGCGTCGCAATCTTCACG+CGG | + | chr1_2:51445354-51445373 | Msa0075840:CDS | 65.0% | |
| GCCGCGTGAAGATTGCGACG+CGG | - | chr1_2:51445358-51445377 | None:intergenic | 65.0% | |
| GCGTCGCAATCTTCACGCGG+CGG | + | chr1_2:51445357-51445376 | Msa0075840:CDS | 65.0% | |
| !! | CGTGGTGGTGGTGGTTGTGG+TGG | - | chr1_2:51445496-51445515 | None:intergenic | 65.0% |
| CACAACCACCACCACCACGC+CGG | + | chr1_2:51445497-51445516 | Msa0075840:CDS | 65.0% | |
| !! | ATCTACCGGCGTGGTGGTGG+TGG | - | chr1_2:51445505-51445524 | None:intergenic | 65.0% |
| AGCGCTCGCCGGAGATTCGA+CGG | - | chr1_2:51445582-51445601 | None:intergenic | 65.0% | |
| GCCGGGGAATTTACGGTGGG+AGG | + | chr1_2:51445761-51445780 | Msa0075840:CDS | 65.0% | |
| TTGAGGAGGTTACCGCCGGC+GGG | + | chr1_2:51445786-51445805 | Msa0075840:CDS | 65.0% | |
| GCCGATAACAATCCCGCCGG+CGG | - | chr1_2:51445801-51445820 | None:intergenic | 65.0% | |
| GCCGGCGGGATTGTTATCGG+CGG | + | chr1_2:51445800-51445819 | Msa0075840:CDS | 65.0% | |
| GCCGCCGATAACAATCCCGC+CGG | - | chr1_2:51445804-51445823 | None:intergenic | 65.0% | |
| !! | CGGCGTGGTGGTGGTGGTTG+TGG | - | chr1_2:51445499-51445518 | None:intergenic | 70.0% |
| GCTCGCCGGAGATTCGACGG+TGG | - | chr1_2:51445579-51445598 | None:intergenic | 70.0% | |
| AGGGATGGAGGGAGACGGCG+AGG | + | chr1_2:51445835-51445854 | Msa0075840:CDS | 70.0% | |
| GGGAGACGGCGAGGAAGCTG+TGG | + | chr1_2:51445844-51445863 | Msa0075840:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 51445333 | 51450023 | 51445333 | ID=Msa0075840;Name=Msa0075840 |
| chr1_2 | mRNA | 51445333 | 51450023 | 51445333 | ID=Msa0075840-mRNA-1;Parent=Msa0075840;Name=Msa0075840-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|1|0.90|1|1|1|11|282|605 |
| chr1_2 | exon | 51445333 | 51445979 | 51445333 | ID=Msa0075840-mRNA-1:exon:15824;Parent=Msa0075840-mRNA-1 |
| chr1_2 | exon | 51446360 | 51446461 | 51446360 | ID=Msa0075840-mRNA-1:exon:15825;Parent=Msa0075840-mRNA-1 |
| chr1_2 | exon | 51446992 | 51447136 | 51446992 | ID=Msa0075840-mRNA-1:exon:15826;Parent=Msa0075840-mRNA-1 |
| chr1_2 | exon | 51447255 | 51447439 | 51447255 | ID=Msa0075840-mRNA-1:exon:15827;Parent=Msa0075840-mRNA-1 |
| chr1_2 | exon | 51447945 | 51448049 | 51447945 | ID=Msa0075840-mRNA-1:exon:15828;Parent=Msa0075840-mRNA-1 |
| chr1_2 | exon | 51448267 | 51448364 | 51448267 | ID=Msa0075840-mRNA-1:exon:15829;Parent=Msa0075840-mRNA-1 |
| chr1_2 | exon | 51448456 | 51448673 | 51448456 | ID=Msa0075840-mRNA-1:exon:15830;Parent=Msa0075840-mRNA-1 |
| chr1_2 | exon | 51448766 | 51448832 | 51448766 | ID=Msa0075840-mRNA-1:exon:15831;Parent=Msa0075840-mRNA-1 |
| chr1_2 | exon | 51448943 | 51449028 | 51448943 | ID=Msa0075840-mRNA-1:exon:15832;Parent=Msa0075840-mRNA-1 |
| chr1_2 | exon | 51449258 | 51449356 | 51449258 | ID=Msa0075840-mRNA-1:exon:15833;Parent=Msa0075840-mRNA-1 |
| chr1_2 | exon | 51449676 | 51450023 | 51449676 | ID=Msa0075840-mRNA-1:exon:15834;Parent=Msa0075840-mRNA-1 |
| chr1_2 | CDS | 51445333 | 51445979 | 51445333 | ID=Msa0075840-mRNA-1:cds;Parent=Msa0075840-mRNA-1 |
| chr1_2 | CDS | 51446360 | 51446461 | 51446360 | ID=Msa0075840-mRNA-1:cds;Parent=Msa0075840-mRNA-1 |
| chr1_2 | CDS | 51446992 | 51447136 | 51446992 | ID=Msa0075840-mRNA-1:cds;Parent=Msa0075840-mRNA-1 |
| chr1_2 | CDS | 51447255 | 51447439 | 51447255 | ID=Msa0075840-mRNA-1:cds;Parent=Msa0075840-mRNA-1 |
| chr1_2 | CDS | 51447945 | 51448049 | 51447945 | ID=Msa0075840-mRNA-1:cds;Parent=Msa0075840-mRNA-1 |
| chr1_2 | CDS | 51448267 | 51448364 | 51448267 | ID=Msa0075840-mRNA-1:cds;Parent=Msa0075840-mRNA-1 |
| chr1_2 | CDS | 51448456 | 51448673 | 51448456 | ID=Msa0075840-mRNA-1:cds;Parent=Msa0075840-mRNA-1 |
| chr1_2 | CDS | 51448766 | 51448832 | 51448766 | ID=Msa0075840-mRNA-1:cds;Parent=Msa0075840-mRNA-1 |
| chr1_2 | CDS | 51448943 | 51449028 | 51448943 | ID=Msa0075840-mRNA-1:cds;Parent=Msa0075840-mRNA-1 |
| chr1_2 | CDS | 51449258 | 51449356 | 51449258 | ID=Msa0075840-mRNA-1:cds;Parent=Msa0075840-mRNA-1 |
| chr1_2 | CDS | 51449676 | 51449741 | 51449676 | ID=Msa0075840-mRNA-1:cds;Parent=Msa0075840-mRNA-1 |
| chr1_2 | three_prime_UTR | 51449742 | 51450023 | 51449742 | ID=Msa0075840-mRNA-1:three_prime_utr;Parent=Msa0075840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
