Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715350 | XP_003611797.1 | 99.369 | 317 | 1 | 1 | 1 | 316 | 1 | 317 | 0.0 | 636 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715350 | sp|Q9FKZ3|LBD36_ARATH | 53.689 | 244 | 83 | 7 | 3 | 229 | 2 | 232 | 2.76e-68 | 218 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715350 | G7K830 | 99.369 | 317 | 1 | 1 | 1 | 316 | 1 | 317 | 0.0 | 636 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0715350 | TF | LOB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004590 | Msa0715350 | 0.804955 | 1.684798e-49 | -8.615850e-47 |
| Msa0011100 | Msa0715350 | -0.803911 | 2.780519e-49 | -8.615850e-47 |
| Msa0013270 | Msa0715350 | 0.804658 | 1.943717e-49 | -8.615850e-47 |
| Msa0016380 | Msa0715350 | -0.807969 | 3.898102e-50 | -8.615850e-47 |
| Msa0017710 | Msa0715350 | 0.810605 | 1.060726e-50 | -8.615850e-47 |
| Msa0025700 | Msa0715350 | 0.811523 | 6.710726e-51 | -8.615850e-47 |
| Msa0034100 | Msa0715350 | -0.803636 | 3.170967e-49 | -8.615850e-47 |
| Msa0040930 | Msa0715350 | 0.805652 | 1.203650e-49 | -8.615850e-47 |
| Msa0045620 | Msa0715350 | 0.822919 | 1.831039e-53 | -8.615850e-47 |
| Msa0057860 | Msa0715350 | 0.825040 | 5.820402e-54 | -8.615850e-47 |
| Msa0059880 | Msa0715350 | 0.819503 | 1.122170e-52 | -8.615850e-47 |
| Msa0062010 | Msa0715350 | 0.803426 | 3.505215e-49 | -8.615850e-47 |
| Msa0073270 | Msa0715350 | 0.825843 | 3.757679e-54 | -8.615850e-47 |
| Msa0078160 | Msa0715350 | -0.802786 | 4.754405e-49 | -8.615850e-47 |
| Msa0089470 | Msa0715350 | -0.809737 | 1.632145e-50 | -8.615850e-47 |
| Msa0102920 | Msa0715350 | 0.806551 | 7.786264e-50 | -8.615850e-47 |
| Msa0610190 | Msa0715350 | 0.834511 | 2.874128e-56 | -8.615850e-47 |
| Msa0612880 | Msa0715350 | -0.807075 | 6.034545e-50 | -8.615850e-47 |
| Msa0623310 | Msa0715350 | 0.824307 | 8.663459e-54 | -8.615850e-47 |
| Msa0645060 | Msa0715350 | 0.800424 | 1.450479e-48 | -8.615850e-47 |
| Msa0659020 | Msa0715350 | -0.835325 | 1.791688e-56 | -8.615850e-47 |
| Msa0667350 | Msa0715350 | -0.812268 | 4.616811e-51 | -8.615850e-47 |
| Msa0673940 | Msa0715350 | 0.802298 | 5.995830e-49 | -8.615850e-47 |
| Msa0676200 | Msa0715350 | 0.823876 | 1.093946e-53 | -8.615850e-47 |
| Msa0680370 | Msa0715350 | 0.813228 | 2.846943e-51 | -8.615850e-47 |
| Msa0684560 | Msa0715350 | 0.823618 | 1.256921e-53 | -8.615850e-47 |
| Msa0685390 | Msa0715350 | -0.802841 | 4.632751e-49 | -8.615850e-47 |
| Msa0687220 | Msa0715350 | 0.807064 | 6.067469e-50 | -8.615850e-47 |
| Msa0689830 | Msa0715350 | 0.808033 | 3.778553e-50 | -8.615850e-47 |
| Msa0691740 | Msa0715350 | -0.800100 | 1.688846e-48 | -8.615850e-47 |
| Msa0705810 | Msa0715350 | -0.803990 | 2.677992e-49 | -8.615850e-47 |
| Msa0707880 | Msa0715350 | -0.806983 | 6.311618e-50 | -8.615850e-47 |
| Msa0711260 | Msa0715350 | 0.819916 | 9.031815e-53 | -8.615850e-47 |
| Msa0715350 | Msa0732970 | 0.817881 | 2.620015e-52 | -8.615850e-47 |
| Msa0715350 | Msa0733240 | -0.807013 | 6.220490e-50 | -8.615850e-47 |
| Msa0715350 | Msa0761830 | 0.836127 | 1.122474e-56 | -8.615850e-47 |
| Msa0715350 | Msa0773960 | 0.804422 | 2.177148e-49 | -8.615850e-47 |
| Msa0715350 | Msa0804170 | 0.843560 | 1.299642e-58 | -8.615850e-47 |
| Msa0715350 | Msa0806930 | 0.814241 | 1.702943e-51 | -8.615850e-47 |
| Msa0715350 | Msa0812020 | -0.812136 | 4.933840e-51 | -8.615850e-47 |
| Msa0715350 | Msa0814160 | 0.804354 | 2.249197e-49 | -8.615850e-47 |
| Msa0715350 | Msa0831890 | 0.820681 | 6.032532e-53 | -8.615850e-47 |
| Msa0715350 | Msa0842180 | 0.838008 | 3.711677e-57 | -8.615850e-47 |
| Msa0715350 | Msa0852090 | -0.808720 | 2.695511e-50 | -8.615850e-47 |
| Msa0715350 | Msa0871420 | 0.812489 | 4.133125e-51 | -8.615850e-47 |
| Msa0715350 | Msa0902340 | 0.810431 | 1.156585e-50 | -8.615850e-47 |
| Msa0715350 | Msa0932140 | 0.800985 | 1.114438e-48 | -8.615850e-47 |
| Msa0715350 | Msa0932150 | 0.823706 | 1.198989e-53 | -8.615850e-47 |
| Msa0715350 | Msa0936630 | 0.807315 | 5.368048e-50 | -8.615850e-47 |
| Msa0715350 | Msa0967900 | -0.819176 | 1.332522e-52 | -8.615850e-47 |
| Msa0715350 | Msa0970270 | 0.809352 | 1.973926e-50 | -8.615850e-47 |
| Msa0715350 | Msa0973770 | 0.808800 | 2.591496e-50 | -8.615850e-47 |
| Msa0715350 | Msa1024350 | 0.811113 | 8.235295e-51 | -8.615850e-47 |
| Msa0715350 | Msa1026710 | 0.818989 | 1.469409e-52 | -8.615850e-47 |
| Msa0715350 | Msa1030320 | 0.802887 | 4.531695e-49 | -8.615850e-47 |
| Msa0715350 | Msa1031530 | -0.800351 | 1.501288e-48 | -8.615850e-47 |
| Msa0715350 | Msa1070630 | -0.817497 | 3.197900e-52 | -8.615850e-47 |
| Msa0715350 | Msa1087380 | 0.804270 | 2.341515e-49 | -8.615850e-47 |
| Msa0715350 | Msa1093190 | -0.810878 | 9.257525e-51 | -8.615850e-47 |
| Msa0715350 | Msa1094630 | 0.800522 | 1.385383e-48 | -8.615850e-47 |
| Msa0715350 | Msa1124210 | 0.800863 | 1.180687e-48 | -8.615850e-47 |
| Msa0715350 | Msa1127200 | 0.816160 | 6.379813e-52 | -8.615850e-47 |
| Msa0715350 | Msa1129660 | -0.807102 | 5.955229e-50 | -8.615850e-47 |
| Msa0715350 | Msa1133440 | -0.804717 | 1.889195e-49 | -8.615850e-47 |
| Msa0715350 | Msa1158450 | -0.813079 | 3.069327e-51 | -8.615850e-47 |
| Msa0715350 | Msa1165460 | 0.813928 | 1.996171e-51 | -8.615850e-47 |
| Msa0715350 | Msa1191540 | -0.800921 | 1.148533e-48 | -8.615850e-47 |
| Msa0715350 | Msa1205270 | -0.811320 | 7.426016e-51 | -8.615850e-47 |
| Msa0715350 | Msa1214960 | 0.801917 | 7.178940e-49 | -8.615850e-47 |
| Msa0715350 | Msa1217890 | 0.815278 | 1.003458e-51 | -8.615850e-47 |
| Msa0715350 | Msa1223620 | 0.806785 | 6.949758e-50 | -8.615850e-47 |
| Msa0715350 | Msa1240060 | 0.824470 | 7.932259e-54 | -8.615850e-47 |
| Msa0715350 | Msa1263520 | 0.809901 | 1.504801e-50 | -8.615850e-47 |
| Msa0715350 | Msa1266120 | -0.807115 | 5.916961e-50 | -8.615850e-47 |
| Msa0715350 | Msa1273320 | 0.816123 | 6.503572e-52 | -8.615850e-47 |
| Msa0715350 | Msa1281370 | 0.830229 | 3.303828e-55 | -8.615850e-47 |
| Msa0715350 | Msa1286860 | -0.800855 | 1.185047e-48 | -8.615850e-47 |
| Msa0715350 | Msa1297220 | -0.829807 | 4.187112e-55 | -8.615850e-47 |
| Msa0715350 | Msa1317240 | -0.805853 | 1.092326e-49 | -8.615850e-47 |
| Msa0715350 | Msa1320530 | 0.822784 | 1.968551e-53 | -8.615850e-47 |
| Msa0715350 | Msa1320660 | -0.803131 | 4.036079e-49 | -8.615850e-47 |
| Msa0715350 | Msa1323260 | -0.825015 | 5.901852e-54 | -8.615850e-47 |
| Msa0715350 | Msa1335200 | -0.809034 | 2.309522e-50 | -8.615850e-47 |
| Msa0715350 | Msa1343450 | -0.826559 | 2.538391e-54 | -8.615850e-47 |
| Msa0715350 | Msa1347610 | 0.803320 | 3.687429e-49 | -8.615850e-47 |
| Msa0715350 | Msa1352630 | -0.806966 | 6.363317e-50 | -8.615850e-47 |
| Msa0715350 | Msa1357860 | 0.817679 | 2.909770e-52 | -8.615850e-47 |
| Msa0715350 | Msa1369180 | -0.800586 | 1.344407e-48 | -8.615850e-47 |
| Msa0715350 | Msa1369400 | -0.806495 | 7.999370e-50 | -8.615850e-47 |
| Msa0715350 | Msa1371800 | 0.819265 | 1.271907e-52 | -8.615850e-47 |
| Msa0715350 | Msa1373560 | 0.805506 | 1.291519e-49 | -8.615850e-47 |
| Msa0715350 | Msa1376070 | 0.811612 | 6.417999e-51 | -8.615850e-47 |
| Msa0715350 | Msa1376310 | 0.821541 | 3.823039e-53 | -8.615850e-47 |
| Msa0715350 | Msa1380740 | 0.805817 | 1.111323e-49 | -8.615850e-47 |
| Msa0715350 | Msa1383500 | 0.802971 | 4.355477e-49 | -8.615850e-47 |
| Msa0715350 | Msa1387530 | 0.804061 | 2.588323e-49 | -8.615850e-47 |
| Msa0715350 | Msa1392570 | -0.803060 | 4.175210e-49 | -8.615850e-47 |
| Msa0715350 | Msa1401000 | -0.808433 | 3.105253e-50 | -8.615850e-47 |
| Msa0715350 | Msa1407670 | 0.814092 | 1.837007e-51 | -8.615850e-47 |
| Msa0715350 | Msa1413020 | 0.846520 | 2.062595e-59 | -8.615850e-47 |
| Msa0715350 | Msa1421130 | 0.803421 | 3.513804e-49 | -8.615850e-47 |
| Msa0715350 | Msa1434700 | 0.800719 | 1.263035e-48 | -8.615850e-47 |
| Msa0715350 | Msa1449770 | 0.821987 | 3.014090e-53 | -8.615850e-47 |
| Msa0715350 | Msa1450630 | -0.805308 | 1.421039e-49 | -8.615850e-47 |
| Msa0715350 | Msa1455360 | 0.805277 | 1.442494e-49 | -8.615850e-47 |
| Msa0715350 | Msa1459610 | 0.802867 | 4.576183e-49 | -8.615850e-47 |
| Msa0715350 | Msa1462780 | 0.810272 | 1.252048e-50 | -8.615850e-47 |
| Msa0121320 | Msa0715350 | 0.807470 | 4.977261e-50 | -8.615850e-47 |
| Msa0137010 | Msa0715350 | -0.807083 | 6.010322e-50 | -8.615850e-47 |
| Msa0147680 | Msa0715350 | 0.825204 | 5.323774e-54 | -8.615850e-47 |
| Msa0150910 | Msa0715350 | 0.809811 | 1.573625e-50 | -8.615850e-47 |
| Msa0166180 | Msa0715350 | 0.812438 | 4.238501e-51 | -8.615850e-47 |
| Msa0178440 | Msa0715350 | -0.804184 | 2.440439e-49 | -8.615850e-47 |
| Msa0185180 | Msa0715350 | -0.810668 | 1.028152e-50 | -8.615850e-47 |
| Msa0190670 | Msa0715350 | 0.811712 | 6.104954e-51 | -8.615850e-47 |
| Msa0190890 | Msa0715350 | 0.812940 | 3.291326e-51 | -8.615850e-47 |
| Msa0193680 | Msa0715350 | 0.821245 | 4.473371e-53 | -8.615850e-47 |
| Msa0196250 | Msa0715350 | 0.813841 | 2.086865e-51 | -8.615850e-47 |
| Msa0196260 | Msa0715350 | 0.846529 | 2.050782e-59 | -8.615850e-47 |
| Msa0211460 | Msa0715350 | 0.804764 | 1.846777e-49 | -8.615850e-47 |
| Msa0221460 | Msa0715350 | -0.812183 | 4.818173e-51 | -8.615850e-47 |
| Msa0225070 | Msa0715350 | -0.809691 | 1.669713e-50 | -8.615850e-47 |
| Msa0233210 | Msa0715350 | 0.815985 | 6.981666e-52 | -8.615850e-47 |
| Msa0234660 | Msa0715350 | -0.805976 | 1.029153e-49 | -8.615850e-47 |
| Msa0235080 | Msa0715350 | 0.836285 | 1.023610e-56 | -8.615850e-47 |
| Msa0236690 | Msa0715350 | -0.802021 | 6.835726e-49 | -8.615850e-47 |
| Msa0238110 | Msa0715350 | 0.819610 | 1.060984e-52 | -8.615850e-47 |
| Msa0364910 | Msa0715350 | -0.803072 | 4.151071e-49 | -8.615850e-47 |
| Msa0370620 | Msa0715350 | 0.807130 | 5.875329e-50 | -8.615850e-47 |
| Msa0379480 | Msa0715350 | 0.809732 | 1.635882e-50 | -8.615850e-47 |
| Msa0396870 | Msa0715350 | 0.801620 | 8.260873e-49 | -8.615850e-47 |
| Msa0404140 | Msa0715350 | 0.821715 | 3.484735e-53 | -8.615850e-47 |
| Msa0430040 | Msa0715350 | -0.818719 | 1.692472e-52 | -8.615850e-47 |
| Msa0444200 | Msa0715350 | 0.806047 | 9.945533e-50 | -8.615850e-47 |
| Msa0457070 | Msa0715350 | -0.801671 | 8.065124e-49 | -8.615850e-47 |
| Msa0244820 | Msa0715350 | -0.820155 | 7.962947e-53 | -8.615850e-47 |
| Msa0266140 | Msa0715350 | -0.824378 | 8.340168e-54 | -8.615850e-47 |
| Msa0267450 | Msa0715350 | -0.810187 | 1.305623e-50 | -8.615850e-47 |
| Msa0267510 | Msa0715350 | -0.808700 | 2.723218e-50 | -8.615850e-47 |
| Msa0272990 | Msa0715350 | -0.811187 | 7.936623e-51 | -8.615850e-47 |
| Msa0273360 | Msa0715350 | 0.806798 | 6.906271e-50 | -8.615850e-47 |
| Msa0274570 | Msa0715350 | 0.820587 | 6.340659e-53 | -8.615850e-47 |
| Msa0279810 | Msa0715350 | 0.800050 | 1.728766e-48 | -8.615850e-47 |
| Msa0290800 | Msa0715350 | 0.802129 | 6.495151e-49 | -8.615850e-47 |
| Msa0300670 | Msa0715350 | -0.813978 | 1.946924e-51 | -8.615850e-47 |
| Msa0304060 | Msa0715350 | -0.827471 | 1.536242e-54 | -8.615850e-47 |
| Msa0311540 | Msa0715350 | 0.806796 | 6.911390e-50 | -8.615850e-47 |
| Msa0316000 | Msa0715350 | 0.806751 | 7.064738e-50 | -8.615850e-47 |
| Msa0328870 | Msa0715350 | 0.807274 | 5.474583e-50 | -8.615850e-47 |
| Msa0337760 | Msa0715350 | -0.812058 | 5.132744e-51 | -8.615850e-47 |
| Msa0349910 | Msa0715350 | 0.804146 | 2.484542e-49 | -8.615850e-47 |
| Msa0349930 | Msa0715350 | 0.815239 | 1.023635e-51 | -8.615850e-47 |
| Msa0483090 | Msa0715350 | -0.801597 | 8.354698e-49 | -8.615850e-47 |
| Msa0528310 | Msa0715350 | 0.800094 | 1.693182e-48 | -8.615850e-47 |
| Msa0549870 | Msa0715350 | 0.806726 | 7.150389e-50 | -8.615850e-47 |
| Msa0566460 | Msa0715350 | 0.800404 | 1.464550e-48 | -8.615850e-47 |
| Msa0568460 | Msa0715350 | -0.824539 | 7.639978e-54 | -8.615850e-47 |
| Msa0576500 | Msa0715350 | -0.801793 | 7.614053e-49 | -8.615850e-47 |
| Msa0584970 | Msa0715350 | 0.801446 | 8.968419e-49 | -8.615850e-47 |
| Msa0602050 | Msa0715350 | 0.821755 | 3.411273e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715350 | MtrunA17_Chr5g0402611 | 99.369 | 317 | 1 | 1 | 1 | 316 | 1 | 317 | 0.0 | 636 |
| Msa0715350 | MtrunA17_Chr3g0115431 | 77.236 | 123 | 28 | 0 | 1 | 123 | 2 | 124 | 2.04e-66 | 207 |
| Msa0715350 | MtrunA17_Chr3g0097221 | 43.202 | 331 | 121 | 11 | 3 | 313 | 2 | 285 | 1.13e-61 | 198 |
| Msa0715350 | MtrunA17_Chr3g0117121 | 68.182 | 110 | 35 | 0 | 2 | 111 | 4 | 113 | 1.57e-49 | 163 |
| Msa0715350 | MtrunA17_Chr7g0227511 | 66.364 | 110 | 37 | 0 | 2 | 111 | 5 | 114 | 3.24e-49 | 162 |
| Msa0715350 | MtrunA17_Chr4g0058651 | 69.811 | 106 | 32 | 0 | 6 | 111 | 9 | 114 | 3.33e-49 | 162 |
| Msa0715350 | MtrunA17_Chr6g0449641 | 67.290 | 107 | 35 | 0 | 2 | 108 | 3 | 109 | 9.93e-49 | 159 |
| Msa0715350 | MtrunA17_Chr8g0353981 | 73.394 | 109 | 29 | 0 | 3 | 111 | 2 | 110 | 9.90e-47 | 157 |
| Msa0715350 | MtrunA17_Chr6g0449651 | 62.727 | 110 | 41 | 0 | 2 | 111 | 61 | 170 | 2.99e-46 | 155 |
| Msa0715350 | MtrunA17_Chr5g0437571 | 59.200 | 125 | 50 | 1 | 6 | 130 | 4 | 127 | 9.73e-45 | 150 |
| Msa0715350 | MtrunA17_Chr3g0106101 | 60.952 | 105 | 41 | 0 | 4 | 108 | 3 | 107 | 4.78e-43 | 146 |
| Msa0715350 | MtrunA17_Chr5g0438091 | 60.748 | 107 | 42 | 0 | 5 | 111 | 36 | 142 | 4.30e-42 | 144 |
| Msa0715350 | MtrunA17_Chr2g0311601 | 62.136 | 103 | 39 | 0 | 7 | 109 | 12 | 114 | 1.03e-41 | 142 |
| Msa0715350 | MtrunA17_Chr3g0114061 | 58.333 | 108 | 45 | 0 | 1 | 108 | 1 | 108 | 1.08e-41 | 142 |
| Msa0715350 | MtrunA17_Chr4g0043421 | 63.366 | 101 | 37 | 0 | 7 | 107 | 14 | 114 | 2.25e-41 | 142 |
| Msa0715350 | MtrunA17_Chr3g0129071 | 60.000 | 105 | 42 | 0 | 7 | 111 | 46 | 150 | 3.09e-40 | 140 |
| Msa0715350 | MtrunA17_Chr5g0437401 | 60.952 | 105 | 41 | 0 | 5 | 109 | 8 | 112 | 1.61e-39 | 137 |
| Msa0715350 | MtrunA17_Chr8g0374601 | 46.309 | 149 | 63 | 3 | 8 | 153 | 26 | 160 | 6.47e-39 | 139 |
| Msa0715350 | MtrunA17_Chr3g0113891 | 60.784 | 102 | 40 | 0 | 5 | 106 | 11 | 112 | 1.44e-38 | 135 |
| Msa0715350 | MtrunA17_Chr8g0374591 | 52.542 | 118 | 56 | 0 | 1 | 118 | 1 | 118 | 3.11e-38 | 132 |
| Msa0715350 | MtrunA17_Chr7g0260971 | 48.889 | 135 | 68 | 1 | 2 | 135 | 8 | 142 | 1.94e-36 | 130 |
| Msa0715350 | MtrunA17_Chr1g0200201 | 56.436 | 101 | 44 | 0 | 9 | 109 | 73 | 173 | 2.34e-36 | 130 |
| Msa0715350 | MtrunA17_Chr4g0030001 | 54.808 | 104 | 46 | 1 | 7 | 109 | 23 | 126 | 4.07e-36 | 128 |
| Msa0715350 | MtrunA17_Chr5g0432451 | 60.000 | 105 | 42 | 0 | 7 | 111 | 42 | 146 | 7.15e-36 | 129 |
| Msa0715350 | MtrunA17_Chr1g0184281 | 56.190 | 105 | 45 | 1 | 4 | 107 | 11 | 115 | 4.09e-34 | 124 |
| Msa0715350 | MtrunA17_Chr8g0374581 | 48.760 | 121 | 61 | 1 | 1 | 120 | 1 | 121 | 6.57e-34 | 124 |
| Msa0715350 | MtrunA17_Chr8g0351701 | 55.238 | 105 | 46 | 1 | 8 | 111 | 23 | 127 | 3.35e-33 | 122 |
| Msa0715350 | MtrunA17_Chr8g0351721 | 52.542 | 118 | 49 | 2 | 8 | 124 | 18 | 129 | 4.51e-33 | 121 |
| Msa0715350 | MtrunA17_Chr7g0245871 | 60.417 | 96 | 37 | 1 | 8 | 102 | 27 | 122 | 8.65e-33 | 121 |
| Msa0715350 | MtrunA17_Chr6g0460951 | 52.427 | 103 | 48 | 1 | 7 | 108 | 39 | 141 | 8.82e-32 | 118 |
| Msa0715350 | MtrunA17_Chr7g0225111 | 48.544 | 103 | 53 | 0 | 7 | 109 | 4 | 106 | 1.27e-31 | 114 |
| Msa0715350 | MtrunA17_Chr7g0261031 | 53.922 | 102 | 46 | 1 | 1 | 101 | 1 | 102 | 1.29e-30 | 115 |
| Msa0715350 | MtrunA17_Chr5g0444351 | 46.602 | 103 | 55 | 0 | 9 | 111 | 6 | 108 | 2.35e-30 | 112 |
| Msa0715350 | MtrunA17_Chr5g0435641 | 52.577 | 97 | 45 | 1 | 7 | 102 | 6 | 102 | 6.74e-30 | 112 |
| Msa0715350 | MtrunA17_Chr1g0184271 | 51.456 | 103 | 49 | 1 | 8 | 109 | 12 | 114 | 4.52e-29 | 111 |
| Msa0715350 | MtrunA17_Chr6g0452661 | 46.667 | 105 | 55 | 1 | 6 | 109 | 7 | 111 | 1.85e-28 | 110 |
| Msa0715350 | MtrunA17_Chr6g0452671 | 42.574 | 101 | 58 | 0 | 5 | 105 | 8 | 108 | 1.12e-26 | 104 |
| Msa0715350 | MtrunA17_Chr6g0452691 | 45.794 | 107 | 57 | 1 | 5 | 110 | 6 | 112 | 8.56e-26 | 101 |
| Msa0715350 | MtrunA17_Chr4g0059901 | 46.000 | 100 | 54 | 0 | 9 | 108 | 11 | 110 | 2.68e-25 | 102 |
| Msa0715350 | MtrunA17_Chr4g0055441 | 37.879 | 132 | 77 | 3 | 9 | 139 | 3 | 130 | 7.05e-25 | 98.2 |
| Msa0715350 | MtrunA17_Chr7g0245861 | 57.303 | 89 | 35 | 2 | 6 | 91 | 10 | 98 | 9.82e-25 | 97.4 |
| Msa0715350 | MtrunA17_Chr6g0460941 | 48.315 | 89 | 45 | 1 | 8 | 95 | 7 | 95 | 1.24e-23 | 92.8 |
| Msa0715350 | MtrunA17_Chr8g0342351 | 38.835 | 103 | 63 | 0 | 9 | 111 | 13 | 115 | 2.17e-22 | 94.4 |
| Msa0715350 | MtrunA17_Chr5g0439111 | 40.952 | 105 | 61 | 1 | 6 | 109 | 7 | 111 | 9.33e-21 | 89.4 |
| Msa0715350 | MtrunA17_Chr4g0040831 | 39.785 | 93 | 56 | 0 | 9 | 101 | 16 | 108 | 9.92e-20 | 85.5 |
| Msa0715350 | MtrunA17_Chr2g0330201 | 35.294 | 102 | 66 | 0 | 9 | 110 | 20 | 121 | 1.82e-18 | 84.0 |
| Msa0715350 | MtrunA17_Chr2g0326041 | 63.830 | 47 | 17 | 0 | 7 | 53 | 32 | 78 | 6.43e-18 | 77.4 |
| Msa0715350 | MtrunA17_Chr4g0046201 | 34.884 | 86 | 56 | 0 | 9 | 94 | 7 | 92 | 1.41e-14 | 72.4 |
| Msa0715350 | MtrunA17_Chr2g0326051 | 53.571 | 56 | 26 | 0 | 53 | 108 | 5 | 60 | 1.09e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715350 | AT5G66870.1 | 53.689 | 244 | 83 | 7 | 3 | 229 | 2 | 232 | 2.81e-69 | 218 |
| Msa0715350 | AT2G23660.2 | 43.226 | 310 | 129 | 12 | 5 | 303 | 2 | 275 | 2.78e-65 | 208 |
| Msa0715350 | AT2G23660.3 | 43.226 | 310 | 129 | 12 | 5 | 303 | 2 | 275 | 2.78e-65 | 208 |
| Msa0715350 | AT2G23660.1 | 43.226 | 310 | 129 | 12 | 5 | 303 | 2 | 275 | 2.78e-65 | 208 |
| Msa0715350 | AT1G65620.1 | 77.273 | 110 | 25 | 0 | 2 | 111 | 3 | 112 | 9.04e-50 | 164 |
| Msa0715350 | AT1G65620.4 | 77.273 | 110 | 25 | 0 | 2 | 111 | 3 | 112 | 9.04e-50 | 164 |
| Msa0715350 | AT1G65620.3 | 77.273 | 110 | 25 | 0 | 2 | 111 | 3 | 112 | 9.04e-50 | 164 |
| Msa0715350 | AT1G65620.5 | 77.273 | 110 | 25 | 0 | 2 | 111 | 3 | 112 | 9.04e-50 | 164 |
| Msa0715350 | AT1G65620.2 | 77.273 | 110 | 25 | 0 | 2 | 111 | 3 | 112 | 9.04e-50 | 164 |
| Msa0715350 | AT5G63090.4 | 62.400 | 125 | 47 | 0 | 2 | 126 | 5 | 129 | 1.35e-49 | 164 |
| Msa0715350 | AT5G63090.3 | 62.400 | 125 | 47 | 0 | 2 | 126 | 5 | 129 | 1.35e-49 | 164 |
| Msa0715350 | AT5G63090.2 | 62.400 | 125 | 47 | 0 | 2 | 126 | 5 | 129 | 1.35e-49 | 164 |
| Msa0715350 | AT5G63090.1 | 62.400 | 125 | 47 | 0 | 2 | 126 | 5 | 129 | 1.35e-49 | 164 |
| Msa0715350 | AT3G27650.1 | 64.602 | 113 | 40 | 0 | 1 | 113 | 32 | 144 | 2.46e-49 | 162 |
| Msa0715350 | AT2G30130.1 | 60.185 | 108 | 43 | 0 | 1 | 108 | 1 | 108 | 4.31e-43 | 147 |
| Msa0715350 | AT2G30340.2 | 52.381 | 126 | 55 | 1 | 7 | 132 | 52 | 172 | 7.23e-40 | 141 |
| Msa0715350 | AT2G30340.1 | 52.381 | 126 | 55 | 1 | 7 | 132 | 51 | 171 | 7.28e-40 | 141 |
| Msa0715350 | AT1G07900.1 | 50.388 | 129 | 62 | 1 | 7 | 133 | 32 | 160 | 1.12e-39 | 138 |
| Msa0715350 | AT1G31320.1 | 69.318 | 88 | 27 | 0 | 7 | 94 | 12 | 99 | 1.86e-39 | 137 |
| Msa0715350 | AT1G16530.1 | 60.194 | 103 | 40 | 1 | 7 | 108 | 13 | 115 | 5.18e-38 | 133 |
| Msa0715350 | AT2G28500.1 | 56.311 | 103 | 45 | 0 | 7 | 109 | 54 | 156 | 9.14e-38 | 134 |
| Msa0715350 | AT3G26660.1 | 52.941 | 102 | 48 | 0 | 9 | 110 | 6 | 107 | 2.46e-37 | 130 |
| Msa0715350 | AT3G26620.1 | 52.941 | 102 | 48 | 0 | 9 | 110 | 6 | 107 | 3.25e-37 | 129 |
| Msa0715350 | AT2G40470.2 | 60.000 | 105 | 42 | 0 | 7 | 111 | 19 | 123 | 2.22e-36 | 130 |
| Msa0715350 | AT2G40470.1 | 60.000 | 105 | 42 | 0 | 7 | 111 | 44 | 148 | 2.89e-36 | 130 |
| Msa0715350 | AT3G11090.1 | 55.963 | 109 | 48 | 0 | 5 | 113 | 8 | 116 | 5.57e-36 | 127 |
| Msa0715350 | AT4G00210.1 | 53.719 | 121 | 49 | 2 | 2 | 121 | 5 | 119 | 1.53e-35 | 128 |
| Msa0715350 | AT3G50510.1 | 45.455 | 143 | 73 | 3 | 6 | 146 | 10 | 149 | 1.84e-34 | 125 |
| Msa0715350 | AT3G50510.2 | 45.455 | 143 | 73 | 3 | 6 | 146 | 10 | 149 | 1.84e-34 | 125 |
| Msa0715350 | AT3G03760.1 | 56.311 | 103 | 44 | 1 | 7 | 108 | 50 | 152 | 4.80e-34 | 126 |
| Msa0715350 | AT2G42430.1 | 51.376 | 109 | 52 | 1 | 2 | 109 | 9 | 117 | 5.48e-32 | 120 |
| Msa0715350 | AT4G00220.1 | 55.446 | 101 | 44 | 1 | 11 | 110 | 20 | 120 | 1.89e-30 | 115 |
| Msa0715350 | AT2G45410.1 | 48.872 | 133 | 55 | 3 | 11 | 136 | 19 | 145 | 2.41e-30 | 114 |
| Msa0715350 | AT3G58190.1 | 52.427 | 103 | 48 | 1 | 8 | 109 | 11 | 113 | 5.58e-30 | 114 |
| Msa0715350 | AT5G35900.1 | 41.912 | 136 | 72 | 3 | 9 | 142 | 6 | 136 | 1.03e-29 | 112 |
| Msa0715350 | AT2G31310.1 | 50.000 | 102 | 50 | 1 | 7 | 107 | 6 | 107 | 8.35e-29 | 109 |
| Msa0715350 | AT2G45420.1 | 52.475 | 101 | 47 | 1 | 11 | 110 | 40 | 140 | 1.97e-28 | 110 |
| Msa0715350 | AT5G06080.1 | 52.000 | 100 | 47 | 1 | 3 | 101 | 2 | 101 | 1.91e-27 | 105 |
| Msa0715350 | AT2G42440.1 | 48.113 | 106 | 54 | 1 | 3 | 107 | 2 | 107 | 4.66e-27 | 106 |
| Msa0715350 | AT3G13850.1 | 40.777 | 103 | 61 | 0 | 9 | 111 | 37 | 139 | 2.48e-25 | 102 |
| Msa0715350 | AT3G47870.1 | 36.937 | 111 | 70 | 0 | 1 | 111 | 29 | 139 | 5.41e-24 | 100 |
| Msa0715350 | AT1G72980.1 | 42.056 | 107 | 62 | 0 | 2 | 108 | 7 | 113 | 7.39e-24 | 97.4 |
| Msa0715350 | AT4G22700.1 | 38.679 | 106 | 63 | 2 | 9 | 113 | 6 | 110 | 1.93e-19 | 85.1 |
| Msa0715350 | AT1G06280.1 | 38.947 | 95 | 58 | 0 | 9 | 103 | 25 | 119 | 6.07e-18 | 81.3 |
| Msa0715350 | AT2G19820.1 | 34.021 | 97 | 63 | 1 | 7 | 102 | 11 | 107 | 1.65e-13 | 66.6 |
| Msa0715350 | AT3G27940.3 | 27.826 | 115 | 83 | 0 | 7 | 121 | 4 | 118 | 6.36e-12 | 63.2 |
| Msa0715350 | AT3G27940.1 | 27.826 | 115 | 83 | 0 | 7 | 121 | 4 | 118 | 6.36e-12 | 63.2 |
| Msa0715350 | AT3G27940.2 | 27.826 | 115 | 83 | 0 | 7 | 121 | 4 | 118 | 6.36e-12 | 63.2 |
Find 74 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATCAATTGTCTCCTTCTT+TGG | 0.211819 | 5_1:+8384612 | Msa0715350:CDS |
| ATTGTCTCCTTCTTTGGCTT+TGG | 0.232947 | 5_1:+8384618 | Msa0715350:CDS |
| CGGCTGAGGGATCCGGTTTA+TGG | 0.239083 | 5_1:+8384121 | Msa0715350:CDS |
| TTGTCTCCTTCTTTGGCTTT+GGG | 0.248585 | 5_1:+8384619 | Msa0715350:CDS |
| GCGGGAACACCACCATTATA+AGG | 0.261368 | 5_1:-8384319 | None:intergenic |
| AATTCTCTTTACCCTTATAA+TGG | 0.295168 | 5_1:+8384307 | Msa0715350:CDS |
| GCAACACCAACAGCAGAAAC+TGG | 0.315263 | 5_1:-8384586 | None:intergenic |
| AAGGAACTTGCTACTTATAT+TGG | 0.327213 | 5_1:+8384214 | Msa0715350:CDS |
| CAGCAGCATAATAACCCTTT+TGG | 0.373437 | 5_1:+8384283 | Msa0715350:CDS |
| TCATCATCATCTTCCACTTC+AGG | 0.390138 | 5_1:+8384726 | Msa0715350:CDS |
| TGTACATATGCAAATCTTTG+AGG | 0.398921 | 5_1:-8383998 | None:intergenic |
| TCTAATTCTTCTGCTGGTGG+TGG | 0.400810 | 5_1:+8384547 | Msa0715350:CDS |
| TCAGTTTCTAATTCTTCTGC+TGG | 0.413224 | 5_1:+8384541 | Msa0715350:CDS |
| GTCTGTTGTTGATGAGTTTG+TGG | 0.423662 | 5_1:-8384787 | None:intergenic |
| ATGAGGCCGAGGCGCGGCTG+AGG | 0.424591 | 5_1:+8384107 | Msa0715350:CDS |
| GCCGCAGCAGGCGTCTGCTG+CGG | 0.439247 | 5_1:-8384376 | None:intergenic |
| GGTTAAGTCGTTGGCTTATG+AGG | 0.447260 | 5_1:+8384090 | Msa0715350:CDS |
| CGAGGCGCGGCTGAGGGATC+CGG | 0.449579 | 5_1:+8384114 | Msa0715350:CDS |
| ATTGGTCCTCAGGCGCTTCA+AGG | 0.451437 | 5_1:+8384232 | Msa0715350:CDS |
| CCGCAGCAGGCGTCTGCTGC+GGG | 0.454243 | 5_1:-8384375 | None:intergenic |
| AGTAACCGCGGGTGCACAAA+TGG | 0.457040 | 5_1:+8384342 | Msa0715350:CDS |
| TGCTACTTATATTGGTCCTC+AGG | 0.459742 | 5_1:+8384222 | Msa0715350:CDS |
| TTGTGCACCCGCGGTTACTG+CGG | 0.462275 | 5_1:-8384338 | None:intergenic |
| CTAATTCTTCTGCTGGTGGT+GGG | 0.463044 | 5_1:+8384548 | Msa0715350:CDS |
| CGGGAACACCACCATTATAA+GGG | 0.465460 | 5_1:-8384318 | None:intergenic |
| ATCTGATGTTGAGCCGCAGC+AGG | 0.471893 | 5_1:-8384388 | None:intergenic |
| GATCTTGGAAGCTCAACAAT+TGG | 0.474204 | 5_1:+8384408 | Msa0715350:CDS |
| CAGCAGAAACTGGGGACACT+TGG | 0.475268 | 5_1:-8384576 | None:intergenic |
| GGCTGTGCTTGCTTCTGTTG+TGG | 0.478322 | 5_1:-8384766 | None:intergenic |
| GCAAATCTTTGAGGATTGTC+CGG | 0.480888 | 5_1:-8383989 | None:intergenic |
| GGGTAAAGAGAATTACCAAA+AGG | 0.483287 | 5_1:-8384298 | None:intergenic |
| TGAACTTAATAATGCTAAGA+AGG | 0.486169 | 5_1:+8384195 | Msa0715350:CDS |
| CAACACCAACAGCAGAAACT+GGG | 0.487780 | 5_1:-8384585 | None:intergenic |
| TGTGCACCCGCGGTTACTGC+GGG | 0.494263 | 5_1:-8384337 | None:intergenic |
| TGCGGCTCAACATCAGATCT+TGG | 0.495170 | 5_1:+8384393 | Msa0715350:CDS |
| GATCCGGTTTATGGTTGTGT+TGG | 0.495699 | 5_1:+8384130 | Msa0715350:CDS |
| AGACCAACACAACCATAAAC+CGG | 0.496772 | 5_1:-8384133 | None:intergenic |
| GTGTCCCCAGTTTCTGCTGT+TGG | 0.507305 | 5_1:+8384580 | Msa0715350:CDS |
| GTGCGGCGTGTAAGTTTCTC+CGG | 0.509242 | 5_1:+8383924 | Msa0715350:CDS |
| GGTAAAGAGAATTACCAAAA+GGG | 0.512111 | 5_1:-8384297 | None:intergenic |
| AGCGAGGAGTGTAGGAGTGT+TGG | 0.514933 | 5_1:+8384814 | Msa0715350:CDS |
| CATAAGCTAAGAGCTATTCA+AGG | 0.519225 | 5_1:+8384172 | Msa0715350:CDS |
| TGATGACGCGGTTAAGTCGT+TGG | 0.519238 | 5_1:+8384081 | Msa0715350:CDS |
| GGATTGTCCGGTGGAAAATA+CGG | 0.519970 | 5_1:-8383977 | None:intergenic |
| CGGATCCCTCAGCCGCGCCT+CGG | 0.522353 | 5_1:-8384113 | None:intergenic |
| TGAGGCCGAGGCGCGGCTGA+GGG | 0.524798 | 5_1:+8384108 | Msa0715350:CDS |
| GGTGTTCCCGCAGTAACCGC+GGG | 0.528814 | 5_1:+8384331 | Msa0715350:CDS |
| GTTTCTAATTCTTCTGCTGG+TGG | 0.536833 | 5_1:+8384544 | Msa0715350:CDS |
| GAGTGTAGGAGTGTTGGACT+TGG | 0.536956 | 5_1:+8384820 | Msa0715350:CDS |
| AGACGGAAAGCGAGGAGTGT+AGG | 0.539133 | 5_1:+8384806 | Msa0715350:CDS |
| GTTTAGTGGTGGGTTTGATG+TGG | 0.541632 | 5_1:+8384516 | Msa0715350:CDS |
| AAAGATCCCAAAGCCAAAGA+AGG | 0.541675 | 5_1:-8384625 | None:intergenic |
| TGTTGCTGAAGAATCGTTGT+GGG | 0.541846 | 5_1:-8384259 | None:intergenic |
| CCCGCAGCAGACGCCTGCTG+CGG | 0.542542 | 5_1:+8384375 | Msa0715350:CDS |
| TCTCTTTACCCTTATAATGG+TGG | 0.546514 | 5_1:+8384310 | Msa0715350:CDS |
| GTCGTTGGCTTATGAGGCCG+AGG | 0.551333 | 5_1:+8384096 | Msa0715350:CDS |
| CAACAAGCACAACAAGGACA+AGG | 0.557226 | 5_1:+8384670 | Msa0715350:CDS |
| CGCGACGCAGCGTGATGACG+CGG | 0.567241 | 5_1:+8384069 | Msa0715350:CDS |
| ATCATCAAATTCACCGTGTG+CGG | 0.568953 | 5_1:+8383907 | Msa0715350:CDS |
| AACACCAACAGCAGAAACTG+GGG | 0.572504 | 5_1:-8384584 | None:intergenic |
| TGGTGTTCCCGCAGTAACCG+CGG | 0.578875 | 5_1:+8384330 | Msa0715350:CDS |
| TGTGCTTGCTTCTGTTGTGG+TGG | 0.587755 | 5_1:-8384763 | None:intergenic |
| AGTAATAGCTGAGCCTGAAG+TGG | 0.590089 | 5_1:-8384739 | None:intergenic |
| TGGCTTATGAGGCCGAGGCG+CGG | 0.601042 | 5_1:+8384101 | Msa0715350:CDS |
| CTGTTGCTGAAGAATCGTTG+TGG | 0.605192 | 5_1:-8384260 | None:intergenic |
| AAATTTGAAAATCAACAAGA+AGG | 0.611014 | 5_1:-8384844 | None:intergenic |
| ACAAACTCATCAACAACAGA+CGG | 0.618822 | 5_1:+8384789 | Msa0715350:CDS |
| AATCACCATTTGTGCACCCG+CGG | 0.620661 | 5_1:-8384347 | None:intergenic |
| GGAATACCTTGAAGCGCCTG+AGG | 0.633316 | 5_1:-8384238 | None:intergenic |
| CACATGCAACAAGCACAACA+AGG | 0.635119 | 5_1:+8384664 | Msa0715350:CDS |
| AGAAACTTACACGCCGCACA+CGG | 0.639705 | 5_1:-8383920 | None:intergenic |
| CAAGCACAACAAGGACAAGG+AGG | 0.641075 | 5_1:+8384673 | Msa0715350:CDS |
| AATCTTTGAGGATTGTCCGG+TGG | 0.653598 | 5_1:-8383986 | None:intergenic |
| TCAACAACAGACGGAAAGCG+AGG | 0.658343 | 5_1:+8384798 | Msa0715350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TGAACTTAATAATGCTAAGA+AGG | + | chr5_1:8384195-8384214 | Msa0715350:CDS | 25.0% |
| ! | AATTCTCTTTACCCTTATAA+TGG | + | chr5_1:8384307-8384326 | Msa0715350:CDS | 25.0% |
| ! | TGAACTTAATAATGCTAAGA+AGG | + | chr5_1:8384195-8384214 | Msa0715350:CDS | 25.0% |
| ! | AATTCTCTTTACCCTTATAA+TGG | + | chr5_1:8384307-8384326 | Msa0715350:CDS | 25.0% |
| TGTACATATGCAAATCTTTG+AGG | - | chr5_1:8384001-8384020 | None:intergenic | 30.0% | |
| ! | GCATATGTACACAAAGTTTT+TGG | + | chr5_1:8384010-8384029 | Msa0715350:CDS | 30.0% |
| !! | AAGGAACTTGCTACTTATAT+TGG | + | chr5_1:8384214-8384233 | Msa0715350:CDS | 30.0% |
| GGTAAAGAGAATTACCAAAA+GGG | - | chr5_1:8384300-8384319 | None:intergenic | 30.0% | |
| TGTACATATGCAAATCTTTG+AGG | - | chr5_1:8384001-8384020 | None:intergenic | 30.0% | |
| ! | GCATATGTACACAAAGTTTT+TGG | + | chr5_1:8384010-8384029 | Msa0715350:CDS | 30.0% |
| !! | AAGGAACTTGCTACTTATAT+TGG | + | chr5_1:8384214-8384233 | Msa0715350:CDS | 30.0% |
| GGTAAAGAGAATTACCAAAA+GGG | - | chr5_1:8384300-8384319 | None:intergenic | 30.0% | |
| CATAAGCTAAGAGCTATTCA+AGG | + | chr5_1:8384172-8384191 | Msa0715350:CDS | 35.0% | |
| GGGTAAAGAGAATTACCAAA+AGG | - | chr5_1:8384301-8384320 | None:intergenic | 35.0% | |
| TCTCTTTACCCTTATAATGG+TGG | + | chr5_1:8384310-8384329 | Msa0715350:CDS | 35.0% | |
| !!! | CAAGAGTTTTTGAGGTTTAG+TGG | + | chr5_1:8384502-8384521 | Msa0715350:CDS | 35.0% |
| !!! | AGTTTTTGAGGTTTAGTGGT+GGG | + | chr5_1:8384506-8384525 | Msa0715350:CDS | 35.0% |
| TCAGTTTCTAATTCTTCTGC+TGG | + | chr5_1:8384541-8384560 | Msa0715350:CDS | 35.0% | |
| TGATCAATTGTCTCCTTCTT+TGG | + | chr5_1:8384612-8384631 | Msa0715350:CDS | 35.0% | |
| ACAAACTCATCAACAACAGA+CGG | + | chr5_1:8384789-8384808 | Msa0715350:CDS | 35.0% | |
| CATAAGCTAAGAGCTATTCA+AGG | + | chr5_1:8384172-8384191 | Msa0715350:CDS | 35.0% | |
| GGGTAAAGAGAATTACCAAA+AGG | - | chr5_1:8384301-8384320 | None:intergenic | 35.0% | |
| TCTCTTTACCCTTATAATGG+TGG | + | chr5_1:8384310-8384329 | Msa0715350:CDS | 35.0% | |
| !!! | CAAGAGTTTTTGAGGTTTAG+TGG | + | chr5_1:8384502-8384521 | Msa0715350:CDS | 35.0% |
| !!! | AGTTTTTGAGGTTTAGTGGT+GGG | + | chr5_1:8384506-8384525 | Msa0715350:CDS | 35.0% |
| TCAGTTTCTAATTCTTCTGC+TGG | + | chr5_1:8384541-8384560 | Msa0715350:CDS | 35.0% | |
| TGATCAATTGTCTCCTTCTT+TGG | + | chr5_1:8384612-8384631 | Msa0715350:CDS | 35.0% | |
| ACAAACTCATCAACAACAGA+CGG | + | chr5_1:8384789-8384808 | Msa0715350:CDS | 35.0% | |
| ATCATCAAATTCACCGTGTG+CGG | + | chr5_1:8383907-8383926 | Msa0715350:CDS | 40.0% | |
| ! | TTTTGCACCGTATTTTCCAC+CGG | + | chr5_1:8383970-8383989 | Msa0715350:CDS | 40.0% |
| ! | GCAAATCTTTGAGGATTGTC+CGG | - | chr5_1:8383992-8384011 | None:intergenic | 40.0% |
| !!! | AGTTTTTGGAGCTAGTAACG+TGG | + | chr5_1:8384024-8384043 | Msa0715350:CDS | 40.0% |
| AGACCAACACAACCATAAAC+CGG | - | chr5_1:8384136-8384155 | None:intergenic | 40.0% | |
| ! | TGCTACTTATATTGGTCCTC+AGG | + | chr5_1:8384222-8384241 | Msa0715350:CDS | 40.0% |
| TGTTGCTGAAGAATCGTTGT+GGG | - | chr5_1:8384262-8384281 | None:intergenic | 40.0% | |
| ! | CAGCAGCATAATAACCCTTT+TGG | + | chr5_1:8384283-8384302 | Msa0715350:CDS | 40.0% |
| GATCTTGGAAGCTCAACAAT+TGG | + | chr5_1:8384408-8384427 | Msa0715350:CDS | 40.0% | |
| ! | GAGAGCAGCAAGAGATTTTT+AGG | + | chr5_1:8384449-8384468 | Msa0715350:CDS | 40.0% |
| ! | AGCAACAGCAAGAGTTTTTG+AGG | + | chr5_1:8384494-8384513 | Msa0715350:CDS | 40.0% |
| !!! | GAGTTTTTGAGGTTTAGTGG+TGG | + | chr5_1:8384505-8384524 | Msa0715350:CDS | 40.0% |
| GTTTCTAATTCTTCTGCTGG+TGG | + | chr5_1:8384544-8384563 | Msa0715350:CDS | 40.0% | |
| ! | ATTGTCTCCTTCTTTGGCTT+TGG | + | chr5_1:8384618-8384637 | Msa0715350:CDS | 40.0% |
| !! | TTGTCTCCTTCTTTGGCTTT+GGG | + | chr5_1:8384619-8384638 | Msa0715350:CDS | 40.0% |
| AAAGATCCCAAAGCCAAAGA+AGG | - | chr5_1:8384628-8384647 | None:intergenic | 40.0% | |
| TCATCATCATCTTCCACTTC+AGG | + | chr5_1:8384726-8384745 | Msa0715350:CDS | 40.0% | |
| ! | GTCTGTTGTTGATGAGTTTG+TGG | - | chr5_1:8384790-8384809 | None:intergenic | 40.0% |
| ATCATCAAATTCACCGTGTG+CGG | + | chr5_1:8383907-8383926 | Msa0715350:CDS | 40.0% | |
| ! | TTTTGCACCGTATTTTCCAC+CGG | + | chr5_1:8383970-8383989 | Msa0715350:CDS | 40.0% |
| ! | GCAAATCTTTGAGGATTGTC+CGG | - | chr5_1:8383992-8384011 | None:intergenic | 40.0% |
| !!! | AGTTTTTGGAGCTAGTAACG+TGG | + | chr5_1:8384024-8384043 | Msa0715350:CDS | 40.0% |
| AGACCAACACAACCATAAAC+CGG | - | chr5_1:8384136-8384155 | None:intergenic | 40.0% | |
| ! | TGCTACTTATATTGGTCCTC+AGG | + | chr5_1:8384222-8384241 | Msa0715350:CDS | 40.0% |
| TGTTGCTGAAGAATCGTTGT+GGG | - | chr5_1:8384262-8384281 | None:intergenic | 40.0% | |
| ! | CAGCAGCATAATAACCCTTT+TGG | + | chr5_1:8384283-8384302 | Msa0715350:CDS | 40.0% |
| GATCTTGGAAGCTCAACAAT+TGG | + | chr5_1:8384408-8384427 | Msa0715350:CDS | 40.0% | |
| ! | GAGAGCAGCAAGAGATTTTT+AGG | + | chr5_1:8384449-8384468 | Msa0715350:CDS | 40.0% |
| ! | AGCAACAGCAAGAGTTTTTG+AGG | + | chr5_1:8384494-8384513 | Msa0715350:CDS | 40.0% |
| !!! | GAGTTTTTGAGGTTTAGTGG+TGG | + | chr5_1:8384505-8384524 | Msa0715350:CDS | 40.0% |
| GTTTCTAATTCTTCTGCTGG+TGG | + | chr5_1:8384544-8384563 | Msa0715350:CDS | 40.0% | |
| ! | ATTGTCTCCTTCTTTGGCTT+TGG | + | chr5_1:8384618-8384637 | Msa0715350:CDS | 40.0% |
| !! | TTGTCTCCTTCTTTGGCTTT+GGG | + | chr5_1:8384619-8384638 | Msa0715350:CDS | 40.0% |
| AAAGATCCCAAAGCCAAAGA+AGG | - | chr5_1:8384628-8384647 | None:intergenic | 40.0% | |
| TCATCATCATCTTCCACTTC+AGG | + | chr5_1:8384726-8384745 | Msa0715350:CDS | 40.0% | |
| ! | GTCTGTTGTTGATGAGTTTG+TGG | - | chr5_1:8384790-8384809 | None:intergenic | 40.0% |
| ! | ACTCTTGAGTGCATTTTCGC+CGG | - | chr5_1:8383946-8383965 | None:intergenic | 45.0% |
| GGATTGTCCGGTGGAAAATA+CGG | - | chr5_1:8383980-8383999 | None:intergenic | 45.0% | |
| ! | AATCTTTGAGGATTGTCCGG+TGG | - | chr5_1:8383989-8384008 | None:intergenic | 45.0% |
| !! | GGTTAAGTCGTTGGCTTATG+AGG | + | chr5_1:8384090-8384109 | Msa0715350:CDS | 45.0% |
| GATCCGGTTTATGGTTGTGT+TGG | + | chr5_1:8384130-8384149 | Msa0715350:CDS | 45.0% | |
| CTGTTGCTGAAGAATCGTTG+TGG | - | chr5_1:8384263-8384282 | None:intergenic | 45.0% | |
| CGGGAACACCACCATTATAA+GGG | - | chr5_1:8384321-8384340 | None:intergenic | 45.0% | |
| !! | GTTTAGTGGTGGGTTTGATG+TGG | + | chr5_1:8384516-8384535 | Msa0715350:CDS | 45.0% |
| TCTAATTCTTCTGCTGGTGG+TGG | + | chr5_1:8384547-8384566 | Msa0715350:CDS | 45.0% | |
| CTAATTCTTCTGCTGGTGGT+GGG | + | chr5_1:8384548-8384567 | Msa0715350:CDS | 45.0% | |
| AACACCAACAGCAGAAACTG+GGG | - | chr5_1:8384587-8384606 | None:intergenic | 45.0% | |
| CAACACCAACAGCAGAAACT+GGG | - | chr5_1:8384588-8384607 | None:intergenic | 45.0% | |
| CACATGCAACAAGCACAACA+AGG | + | chr5_1:8384664-8384683 | Msa0715350:CDS | 45.0% | |
| CAACAAGCACAACAAGGACA+AGG | + | chr5_1:8384670-8384689 | Msa0715350:CDS | 45.0% | |
| AGTAATAGCTGAGCCTGAAG+TGG | - | chr5_1:8384742-8384761 | None:intergenic | 45.0% | |
| ! | ACTCTTGAGTGCATTTTCGC+CGG | - | chr5_1:8383946-8383965 | None:intergenic | 45.0% |
| GGATTGTCCGGTGGAAAATA+CGG | - | chr5_1:8383980-8383999 | None:intergenic | 45.0% | |
| ! | AATCTTTGAGGATTGTCCGG+TGG | - | chr5_1:8383989-8384008 | None:intergenic | 45.0% |
| !! | GGTTAAGTCGTTGGCTTATG+AGG | + | chr5_1:8384090-8384109 | Msa0715350:CDS | 45.0% |
| GATCCGGTTTATGGTTGTGT+TGG | + | chr5_1:8384130-8384149 | Msa0715350:CDS | 45.0% | |
| CTGTTGCTGAAGAATCGTTG+TGG | - | chr5_1:8384263-8384282 | None:intergenic | 45.0% | |
| CGGGAACACCACCATTATAA+GGG | - | chr5_1:8384321-8384340 | None:intergenic | 45.0% | |
| !! | GTTTAGTGGTGGGTTTGATG+TGG | + | chr5_1:8384516-8384535 | Msa0715350:CDS | 45.0% |
| TCTAATTCTTCTGCTGGTGG+TGG | + | chr5_1:8384547-8384566 | Msa0715350:CDS | 45.0% | |
| CTAATTCTTCTGCTGGTGGT+GGG | + | chr5_1:8384548-8384567 | Msa0715350:CDS | 45.0% | |
| AACACCAACAGCAGAAACTG+GGG | - | chr5_1:8384587-8384606 | None:intergenic | 45.0% | |
| CAACACCAACAGCAGAAACT+GGG | - | chr5_1:8384588-8384607 | None:intergenic | 45.0% | |
| CACATGCAACAAGCACAACA+AGG | + | chr5_1:8384664-8384683 | Msa0715350:CDS | 45.0% | |
| CAACAAGCACAACAAGGACA+AGG | + | chr5_1:8384670-8384689 | Msa0715350:CDS | 45.0% | |
| AGTAATAGCTGAGCCTGAAG+TGG | - | chr5_1:8384742-8384761 | None:intergenic | 45.0% | |
| AGAAACTTACACGCCGCACA+CGG | - | chr5_1:8383923-8383942 | None:intergenic | 50.0% | |
| ! | TGATGACGCGGTTAAGTCGT+TGG | + | chr5_1:8384081-8384100 | Msa0715350:CDS | 50.0% |
| GCGGGAACACCACCATTATA+AGG | - | chr5_1:8384322-8384341 | None:intergenic | 50.0% | |
| AATCACCATTTGTGCACCCG+CGG | - | chr5_1:8384350-8384369 | None:intergenic | 50.0% | |
| TGCGGCTCAACATCAGATCT+TGG | + | chr5_1:8384393-8384412 | Msa0715350:CDS | 50.0% | |
| GCAACACCAACAGCAGAAAC+TGG | - | chr5_1:8384589-8384608 | None:intergenic | 50.0% | |
| CAAGCACAACAAGGACAAGG+AGG | + | chr5_1:8384673-8384692 | Msa0715350:CDS | 50.0% | |
| TGTGCTTGCTTCTGTTGTGG+TGG | - | chr5_1:8384766-8384785 | None:intergenic | 50.0% | |
| TCAACAACAGACGGAAAGCG+AGG | + | chr5_1:8384798-8384817 | Msa0715350:CDS | 50.0% | |
| !! | GAGTGTAGGAGTGTTGGACT+TGG | + | chr5_1:8384820-8384839 | Msa0715350:CDS | 50.0% |
| AGAAACTTACACGCCGCACA+CGG | - | chr5_1:8383923-8383942 | None:intergenic | 50.0% | |
| ! | TGATGACGCGGTTAAGTCGT+TGG | + | chr5_1:8384081-8384100 | Msa0715350:CDS | 50.0% |
| GCGGGAACACCACCATTATA+AGG | - | chr5_1:8384322-8384341 | None:intergenic | 50.0% | |
| AATCACCATTTGTGCACCCG+CGG | - | chr5_1:8384350-8384369 | None:intergenic | 50.0% | |
| TGCGGCTCAACATCAGATCT+TGG | + | chr5_1:8384393-8384412 | Msa0715350:CDS | 50.0% | |
| GCAACACCAACAGCAGAAAC+TGG | - | chr5_1:8384589-8384608 | None:intergenic | 50.0% | |
| CAAGCACAACAAGGACAAGG+AGG | + | chr5_1:8384673-8384692 | Msa0715350:CDS | 50.0% | |
| TGTGCTTGCTTCTGTTGTGG+TGG | - | chr5_1:8384766-8384785 | None:intergenic | 50.0% | |
| TCAACAACAGACGGAAAGCG+AGG | + | chr5_1:8384798-8384817 | Msa0715350:CDS | 50.0% | |
| !! | GAGTGTAGGAGTGTTGGACT+TGG | + | chr5_1:8384820-8384839 | Msa0715350:CDS | 50.0% |
| GTGCGGCGTGTAAGTTTCTC+CGG | + | chr5_1:8383924-8383943 | Msa0715350:CDS | 55.0% | |
| ATTGGTCCTCAGGCGCTTCA+AGG | + | chr5_1:8384232-8384251 | Msa0715350:CDS | 55.0% | |
| ! | GGAATACCTTGAAGCGCCTG+AGG | - | chr5_1:8384241-8384260 | None:intergenic | 55.0% |
| AGTAACCGCGGGTGCACAAA+TGG | + | chr5_1:8384342-8384361 | Msa0715350:CDS | 55.0% | |
| ATCTGATGTTGAGCCGCAGC+AGG | - | chr5_1:8384391-8384410 | None:intergenic | 55.0% | |
| CAGCAGAAACTGGGGACACT+TGG | - | chr5_1:8384579-8384598 | None:intergenic | 55.0% | |
| GTGTCCCCAGTTTCTGCTGT+TGG | + | chr5_1:8384580-8384599 | Msa0715350:CDS | 55.0% | |
| GGCTGTGCTTGCTTCTGTTG+TGG | - | chr5_1:8384769-8384788 | None:intergenic | 55.0% | |
| ! | AGACGGAAAGCGAGGAGTGT+AGG | + | chr5_1:8384806-8384825 | Msa0715350:CDS | 55.0% |
| ! | AGCGAGGAGTGTAGGAGTGT+TGG | + | chr5_1:8384814-8384833 | Msa0715350:CDS | 55.0% |
| GTGCGGCGTGTAAGTTTCTC+CGG | + | chr5_1:8383924-8383943 | Msa0715350:CDS | 55.0% | |
| ATTGGTCCTCAGGCGCTTCA+AGG | + | chr5_1:8384232-8384251 | Msa0715350:CDS | 55.0% | |
| ! | GGAATACCTTGAAGCGCCTG+AGG | - | chr5_1:8384241-8384260 | None:intergenic | 55.0% |
| AGTAACCGCGGGTGCACAAA+TGG | + | chr5_1:8384342-8384361 | Msa0715350:CDS | 55.0% | |
| ATCTGATGTTGAGCCGCAGC+AGG | - | chr5_1:8384391-8384410 | None:intergenic | 55.0% | |
| CAGCAGAAACTGGGGACACT+TGG | - | chr5_1:8384579-8384598 | None:intergenic | 55.0% | |
| GTGTCCCCAGTTTCTGCTGT+TGG | + | chr5_1:8384580-8384599 | Msa0715350:CDS | 55.0% | |
| GGCTGTGCTTGCTTCTGTTG+TGG | - | chr5_1:8384769-8384788 | None:intergenic | 55.0% | |
| ! | AGACGGAAAGCGAGGAGTGT+AGG | + | chr5_1:8384806-8384825 | Msa0715350:CDS | 55.0% |
| ! | AGCGAGGAGTGTAGGAGTGT+TGG | + | chr5_1:8384814-8384833 | Msa0715350:CDS | 55.0% |
| !! | GTCGTTGGCTTATGAGGCCG+AGG | + | chr5_1:8384096-8384115 | Msa0715350:CDS | 60.0% |
| CGGCTGAGGGATCCGGTTTA+TGG | + | chr5_1:8384121-8384140 | Msa0715350:CDS | 60.0% | |
| TGGTGTTCCCGCAGTAACCG+CGG | + | chr5_1:8384330-8384349 | Msa0715350:CDS | 60.0% | |
| TTGTGCACCCGCGGTTACTG+CGG | - | chr5_1:8384341-8384360 | None:intergenic | 60.0% | |
| !! | GTCGTTGGCTTATGAGGCCG+AGG | + | chr5_1:8384096-8384115 | Msa0715350:CDS | 60.0% |
| CGGCTGAGGGATCCGGTTTA+TGG | + | chr5_1:8384121-8384140 | Msa0715350:CDS | 60.0% | |
| TGGTGTTCCCGCAGTAACCG+CGG | + | chr5_1:8384330-8384349 | Msa0715350:CDS | 60.0% | |
| TTGTGCACCCGCGGTTACTG+CGG | - | chr5_1:8384341-8384360 | None:intergenic | 60.0% | |
| TGGCTTATGAGGCCGAGGCG+CGG | + | chr5_1:8384101-8384120 | Msa0715350:CDS | 65.0% | |
| GGTGTTCCCGCAGTAACCGC+GGG | + | chr5_1:8384331-8384350 | Msa0715350:CDS | 65.0% | |
| TGTGCACCCGCGGTTACTGC+GGG | - | chr5_1:8384340-8384359 | None:intergenic | 65.0% | |
| TGGCTTATGAGGCCGAGGCG+CGG | + | chr5_1:8384101-8384120 | Msa0715350:CDS | 65.0% | |
| GGTGTTCCCGCAGTAACCGC+GGG | + | chr5_1:8384331-8384350 | Msa0715350:CDS | 65.0% | |
| TGTGCACCCGCGGTTACTGC+GGG | - | chr5_1:8384340-8384359 | None:intergenic | 65.0% | |
| ! | CGCGACGCAGCGTGATGACG+CGG | + | chr5_1:8384069-8384088 | Msa0715350:CDS | 70.0% |
| ! | CGCGACGCAGCGTGATGACG+CGG | + | chr5_1:8384069-8384088 | Msa0715350:CDS | 70.0% |
| ATGAGGCCGAGGCGCGGCTG+AGG | + | chr5_1:8384107-8384126 | Msa0715350:CDS | 75.0% | |
| TGAGGCCGAGGCGCGGCTGA+GGG | + | chr5_1:8384108-8384127 | Msa0715350:CDS | 75.0% | |
| CGGATCCCTCAGCCGCGCCT+CGG | - | chr5_1:8384116-8384135 | None:intergenic | 75.0% | |
| CGAGGCGCGGCTGAGGGATC+CGG | + | chr5_1:8384114-8384133 | Msa0715350:CDS | 75.0% | |
| CCGCAGCAGGCGTCTGCTGC+GGG | - | chr5_1:8384378-8384397 | None:intergenic | 75.0% | |
| CCCGCAGCAGACGCCTGCTG+CGG | + | chr5_1:8384375-8384394 | Msa0715350:CDS | 75.0% | |
| GCCGCAGCAGGCGTCTGCTG+CGG | - | chr5_1:8384379-8384398 | None:intergenic | 75.0% | |
| ATGAGGCCGAGGCGCGGCTG+AGG | + | chr5_1:8384107-8384126 | Msa0715350:CDS | 75.0% | |
| TGAGGCCGAGGCGCGGCTGA+GGG | + | chr5_1:8384108-8384127 | Msa0715350:CDS | 75.0% | |
| CGGATCCCTCAGCCGCGCCT+CGG | - | chr5_1:8384116-8384135 | None:intergenic | 75.0% | |
| CGAGGCGCGGCTGAGGGATC+CGG | + | chr5_1:8384114-8384133 | Msa0715350:CDS | 75.0% | |
| CCGCAGCAGGCGTCTGCTGC+GGG | - | chr5_1:8384378-8384397 | None:intergenic | 75.0% | |
| CCCGCAGCAGACGCCTGCTG+CGG | + | chr5_1:8384375-8384394 | Msa0715350:CDS | 75.0% | |
| GCCGCAGCAGGCGTCTGCTG+CGG | - | chr5_1:8384379-8384398 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 8383899 | 8384855 | 8383899 | ID=Msa0715350;Name=Msa0715350 |
| chr5_1 | mRNA | 8383899 | 8384855 | 8383899 | ID=Msa0715350-mRNA-1;Parent=Msa0715350;Name=Msa0715350-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|318 |
| chr5_1 | exon | 8383899 | 8384855 | 8383899 | ID=Msa0715350-mRNA-1:exon:3453;Parent=Msa0715350-mRNA-1 |
| chr5_1 | CDS | 8383899 | 8384855 | 8383899 | ID=Msa0715350-mRNA-1:cds;Parent=Msa0715350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
