Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281370 | AET02191.1 | 98.356 | 365 | 6 | 0 | 1 | 365 | 35 | 399 | 0.0 | 734 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281370 | sp|P40941|ADT2_ARATH | 79.221 | 385 | 60 | 3 | 1 | 365 | 1 | 385 | 0.0 | 588 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281370 | G7LDP4 | 98.356 | 365 | 6 | 0 | 1 | 365 | 35 | 399 | 0.0 | 734 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004590 | Msa1281370 | 0.811808 | 5.816672e-51 | -8.615850e-47 |
| Msa0009560 | Msa1281370 | -0.803735 | 3.025389e-49 | -8.615850e-47 |
| Msa0016440 | Msa1281370 | 0.829332 | 5.461172e-55 | -8.615850e-47 |
| Msa0020320 | Msa1281370 | -0.807543 | 4.801883e-50 | -8.615850e-47 |
| Msa0025700 | Msa1281370 | 0.823784 | 1.149188e-53 | -8.615850e-47 |
| Msa0036810 | Msa1281370 | 0.804071 | 2.575746e-49 | -8.615850e-47 |
| Msa0041450 | Msa1281370 | 0.822545 | 2.236940e-53 | -8.615850e-47 |
| Msa0043150 | Msa1281370 | 0.818401 | 1.997903e-52 | -8.615850e-47 |
| Msa0045620 | Msa1281370 | 0.865359 | 6.252791e-65 | -8.615850e-47 |
| Msa0048950 | Msa1281370 | 0.812018 | 5.236776e-51 | -8.615850e-47 |
| Msa0057860 | Msa1281370 | 0.820125 | 8.092712e-53 | -8.615850e-47 |
| Msa0059880 | Msa1281370 | 0.819029 | 1.438893e-52 | -8.615850e-47 |
| Msa0073270 | Msa1281370 | 0.812135 | 4.935970e-51 | -8.615850e-47 |
| Msa0091090 | Msa1281370 | -0.828352 | 9.428027e-55 | -8.615850e-47 |
| Msa0102920 | Msa1281370 | 0.808219 | 3.449420e-50 | -8.615850e-47 |
| Msa0605410 | Msa1281370 | 0.814806 | 1.277060e-51 | -8.615850e-47 |
| Msa0618840 | Msa1281370 | 0.803253 | 3.808127e-49 | -8.615850e-47 |
| Msa0618990 | Msa1281370 | 0.807735 | 4.371370e-50 | -8.615850e-47 |
| Msa0623310 | Msa1281370 | 0.865737 | 4.753507e-65 | -8.615850e-47 |
| Msa0623360 | Msa1281370 | -0.800127 | 1.667082e-48 | -8.615850e-47 |
| Msa0623980 | Msa1281370 | 0.800374 | 1.485209e-48 | -8.615850e-47 |
| Msa0624930 | Msa1281370 | 0.847824 | 9.057994e-60 | -8.615850e-47 |
| Msa0626980 | Msa1281370 | 0.809798 | 1.583089e-50 | -8.615850e-47 |
| Msa0627360 | Msa1281370 | 0.818719 | 1.692594e-52 | -8.615850e-47 |
| Msa0630850 | Msa1281370 | -0.812511 | 4.086724e-51 | -8.615850e-47 |
| Msa0643020 | Msa1281370 | 0.845790 | 3.260711e-59 | -8.615850e-47 |
| Msa0659020 | Msa1281370 | -0.816738 | 4.737856e-52 | -8.615850e-47 |
| Msa0659300 | Msa1281370 | 0.864406 | 1.244600e-64 | -8.615850e-47 |
| Msa0671400 | Msa1281370 | 0.815287 | 9.988795e-52 | -8.615850e-47 |
| Msa0673940 | Msa1281370 | 0.814659 | 1.376669e-51 | -8.615850e-47 |
| Msa0676200 | Msa1281370 | 0.800103 | 1.685899e-48 | -8.615850e-47 |
| Msa0681880 | Msa1281370 | -0.815880 | 7.369166e-52 | -8.615850e-47 |
| Msa0682730 | Msa1281370 | 0.855548 | 5.860319e-62 | -8.615850e-47 |
| Msa0689830 | Msa1281370 | 0.815627 | 8.390972e-52 | -8.615850e-47 |
| Msa0704780 | Msa1281370 | -0.817765 | 2.782192e-52 | -8.615850e-47 |
| Msa0705050 | Msa1281370 | -0.831388 | 1.717537e-55 | -8.615850e-47 |
| Msa0705460 | Msa1281370 | 0.851604 | 7.962466e-61 | -8.615850e-47 |
| Msa0705480 | Msa1281370 | 0.802317 | 5.941755e-49 | -8.615850e-47 |
| Msa0715350 | Msa1281370 | 0.830229 | 3.303828e-55 | -8.615850e-47 |
| Msa0715510 | Msa1281370 | 0.835927 | 1.261948e-56 | -8.615850e-47 |
| Msa0726520 | Msa1281370 | 0.823297 | 1.494315e-53 | -8.615850e-47 |
| Msa0732970 | Msa1281370 | 0.837607 | 4.704684e-57 | -8.615850e-47 |
| Msa0741660 | Msa1281370 | 0.832300 | 1.022960e-55 | -8.615850e-47 |
| Msa0761830 | Msa1281370 | 0.813625 | 2.328433e-51 | -8.615850e-47 |
| Msa0771910 | Msa1281370 | 0.835084 | 2.060964e-56 | -8.615850e-47 |
| Msa0773960 | Msa1281370 | 0.834438 | 2.997072e-56 | -8.615850e-47 |
| Msa0775420 | Msa1281370 | -0.802720 | 4.905842e-49 | -8.615850e-47 |
| Msa0791300 | Msa1281370 | 0.818743 | 1.671225e-52 | -8.615850e-47 |
| Msa0803530 | Msa1281370 | -0.800356 | 1.497584e-48 | -8.615850e-47 |
| Msa0804170 | Msa1281370 | 0.822802 | 1.949762e-53 | -8.615850e-47 |
| Msa0810080 | Msa1281370 | 0.811559 | 6.589395e-51 | -8.615850e-47 |
| Msa0812800 | Msa1281370 | -0.804312 | 2.294257e-49 | -8.615850e-47 |
| Msa0818580 | Msa1281370 | 0.801456 | 8.927549e-49 | -8.615850e-47 |
| Msa0822740 | Msa1281370 | 0.818224 | 2.191718e-52 | -8.615850e-47 |
| Msa0835550 | Msa1281370 | -0.802869 | 4.572426e-49 | -8.615850e-47 |
| Msa0143280 | Msa1281370 | -0.822545 | 2.236940e-53 | -8.615850e-47 |
| Msa0147680 | Msa1281370 | 0.837376 | 5.392618e-57 | -8.615850e-47 |
| Msa0150910 | Msa1281370 | 0.811466 | 6.904319e-51 | -8.615850e-47 |
| Msa0158760 | Msa1281370 | 0.803584 | 3.251225e-49 | -8.615850e-47 |
| Msa0160650 | Msa1281370 | -0.828993 | 6.599673e-55 | -8.615850e-47 |
| Msa0170760 | Msa1281370 | 0.838622 | 2.577795e-57 | -8.615850e-47 |
| Msa0171060 | Msa1281370 | 0.811593 | 6.478141e-51 | -8.615850e-47 |
| Msa0183200 | Msa1281370 | -0.806411 | 8.332789e-50 | -8.615850e-47 |
| Msa0185690 | Msa1281370 | 0.803647 | 3.154390e-49 | -8.615850e-47 |
| Msa0188500 | Msa1281370 | -0.824779 | 6.707639e-54 | -8.615850e-47 |
| Msa0190670 | Msa1281370 | 0.800614 | 1.326953e-48 | -8.615850e-47 |
| Msa0196250 | Msa1281370 | 0.811963 | 5.382308e-51 | -8.615850e-47 |
| Msa0196260 | Msa1281370 | 0.822302 | 2.547629e-53 | -8.615850e-47 |
| Msa0216550 | Msa1281370 | -0.807514 | 4.869542e-50 | -8.615850e-47 |
| Msa0223190 | Msa1281370 | -0.844808 | 6.008519e-59 | -8.615850e-47 |
| Msa0225880 | Msa1281370 | -0.821736 | 3.444676e-53 | -8.615850e-47 |
| Msa0230980 | Msa1281370 | -0.810377 | 1.187886e-50 | -8.615850e-47 |
| Msa0235080 | Msa1281370 | 0.828799 | 7.354514e-55 | -8.615850e-47 |
| Msa0238110 | Msa1281370 | 0.820383 | 7.059885e-53 | -8.615850e-47 |
| Msa1236860 | Msa1281370 | -0.803513 | 3.363893e-49 | -8.615850e-47 |
| Msa1237260 | Msa1281370 | -0.807753 | 4.332767e-50 | -8.615850e-47 |
| Msa1240060 | Msa1281370 | 0.985733 | 1.712066e-164 | -8.615850e-47 |
| Msa1243630 | Msa1281370 | -0.819711 | 1.006057e-52 | -8.615850e-47 |
| Msa1244220 | Msa1281370 | -0.815821 | 7.596634e-52 | -8.615850e-47 |
| Msa1263000 | Msa1281370 | 0.803892 | 2.805535e-49 | -8.615850e-47 |
| Msa1281370 | Msa1286420 | 0.802393 | 5.731736e-49 | -8.615850e-47 |
| Msa1281370 | Msa1312240 | 0.808526 | 2.966412e-50 | -8.615850e-47 |
| Msa1281370 | Msa1320530 | 0.982559 | 2.096597e-155 | -8.615850e-47 |
| Msa1281370 | Msa1334560 | 0.809857 | 1.537669e-50 | -8.615850e-47 |
| Msa1281370 | Msa1336100 | 0.805785 | 1.128566e-49 | -8.615850e-47 |
| Msa1281370 | Msa1342400 | -0.813100 | 3.036568e-51 | -8.615850e-47 |
| Msa1281370 | Msa1342760 | 0.809531 | 1.806947e-50 | -8.615850e-47 |
| Msa1281370 | Msa1343480 | -0.809307 | 2.018781e-50 | -8.615850e-47 |
| Msa1281370 | Msa1344680 | 0.863014 | 3.367576e-64 | -8.615850e-47 |
| Msa1281370 | Msa1347610 | 0.802792 | 4.742559e-49 | -8.615850e-47 |
| Msa1281370 | Msa1353280 | -0.805414 | 1.350487e-49 | -8.615850e-47 |
| Msa1281370 | Msa1361680 | 0.826564 | 2.531186e-54 | -8.615850e-47 |
| Msa1281370 | Msa1362590 | 0.813471 | 2.517573e-51 | -8.615850e-47 |
| Msa1281370 | Msa1370630 | -0.812539 | 4.030122e-51 | -8.615850e-47 |
| Msa1281370 | Msa1370930 | 0.821519 | 3.868211e-53 | -8.615850e-47 |
| Msa1281370 | Msa1371800 | 0.862027 | 6.775149e-64 | -8.615850e-47 |
| Msa1281370 | Msa1373560 | 0.806642 | 7.449864e-50 | -8.615850e-47 |
| Msa1281370 | Msa1376070 | 0.839456 | 1.567668e-57 | -8.615850e-47 |
| Msa1281370 | Msa1376310 | 0.860529 | 1.938838e-63 | -8.615850e-47 |
| Msa1281370 | Msa1377520 | 0.817299 | 3.544156e-52 | -8.615850e-47 |
| Msa1281370 | Msa1378400 | 0.817171 | 3.786843e-52 | -8.615850e-47 |
| Msa1281370 | Msa1381330 | 0.826472 | 2.662217e-54 | -8.615850e-47 |
| Msa1281370 | Msa1386250 | -0.820146 | 8.002910e-53 | -8.615850e-47 |
| Msa1281370 | Msa1396550 | 0.811434 | 7.014564e-51 | -8.615850e-47 |
| Msa1281370 | Msa1401000 | -0.805049 | 1.610555e-49 | -8.615850e-47 |
| Msa1281370 | Msa1407670 | 0.841540 | 4.467249e-58 | -8.615850e-47 |
| Msa1281370 | Msa1413020 | 0.825384 | 4.827767e-54 | -8.615850e-47 |
| Msa1281370 | Msa1413900 | -0.825778 | 3.893910e-54 | -8.615850e-47 |
| Msa1281370 | Msa1414650 | 0.837461 | 5.128450e-57 | -8.615850e-47 |
| Msa1281370 | Msa1417950 | 0.806536 | 7.841996e-50 | -8.615850e-47 |
| Msa1281370 | Msa1421120 | 0.827906 | 1.207440e-54 | -8.615850e-47 |
| Msa1281370 | Msa1421130 | 0.803922 | 2.765820e-49 | -8.615850e-47 |
| Msa1281370 | Msa1426420 | 0.805060 | 1.602167e-49 | -8.615850e-47 |
| Msa1281370 | Msa1427180 | -0.849841 | 2.495332e-60 | -8.615850e-47 |
| Msa1281370 | Msa1431520 | 0.824036 | 1.003134e-53 | -8.615850e-47 |
| Msa1281370 | Msa1447900 | 0.828852 | 7.141193e-55 | -8.615850e-47 |
| Msa1281370 | Msa1449770 | 0.846486 | 2.107186e-59 | -8.615850e-47 |
| Msa1281370 | Msa1450630 | -0.816985 | 4.170446e-52 | -8.615850e-47 |
| Msa1281370 | Msa1451660 | 0.820031 | 8.501309e-53 | -8.615850e-47 |
| Msa1281370 | Msa1460970 | 0.902905 | 6.009188e-79 | -8.615850e-47 |
| Msa0380590 | Msa1281370 | 0.819233 | 1.293509e-52 | -8.615850e-47 |
| Msa0403720 | Msa1281370 | -0.814411 | 1.561951e-51 | -8.615850e-47 |
| Msa0416390 | Msa1281370 | 0.858441 | 8.222176e-63 | -8.615850e-47 |
| Msa0421390 | Msa1281370 | -0.805657 | 1.200835e-49 | -8.615850e-47 |
| Msa0428330 | Msa1281370 | -0.812783 | 3.563376e-51 | -8.615850e-47 |
| Msa0437540 | Msa1281370 | 0.809332 | 1.993824e-50 | -8.615850e-47 |
| Msa0444200 | Msa1281370 | 0.823492 | 1.345302e-53 | -8.615850e-47 |
| Msa0462980 | Msa1281370 | 0.819744 | 9.888783e-53 | -8.615850e-47 |
| Msa0982960 | Msa1281370 | 0.808302 | 3.311247e-50 | -8.615850e-47 |
| Msa0986560 | Msa1281370 | -0.804786 | 1.827901e-49 | -8.615850e-47 |
| Msa0995220 | Msa1281370 | -0.802157 | 6.409325e-49 | -8.615850e-47 |
| Msa0999590 | Msa1281370 | -0.819912 | 9.054347e-53 | -8.615850e-47 |
| Msa1003110 | Msa1281370 | 0.803793 | 2.942907e-49 | -8.615850e-47 |
| Msa1012520 | Msa1281370 | 0.815898 | 7.302720e-52 | -8.615850e-47 |
| Msa1021620 | Msa1281370 | 0.806347 | 8.599018e-50 | -8.615850e-47 |
| Msa1026710 | Msa1281370 | 0.811393 | 7.161866e-51 | -8.615850e-47 |
| Msa1030580 | Msa1281370 | 0.816722 | 4.776730e-52 | -8.615850e-47 |
| Msa1038110 | Msa1281370 | -0.801881 | 7.303521e-49 | -8.615850e-47 |
| Msa1040730 | Msa1281370 | 0.842868 | 1.988390e-58 | -8.615850e-47 |
| Msa1053990 | Msa1281370 | 0.862828 | 3.844635e-64 | -8.615850e-47 |
| Msa1061760 | Msa1281370 | 0.809367 | 1.959395e-50 | -8.615850e-47 |
| Msa1076830 | Msa1281370 | 0.829026 | 6.479389e-55 | -8.615850e-47 |
| Msa1083630 | Msa1281370 | 0.829505 | 4.958019e-55 | -8.615850e-47 |
| Msa1094630 | Msa1281370 | 0.815047 | 1.128925e-51 | -8.615850e-47 |
| Msa1105540 | Msa1281370 | 0.809622 | 1.727632e-50 | -8.615850e-47 |
| Msa1105580 | Msa1281370 | 0.813041 | 3.128694e-51 | -8.615850e-47 |
| Msa0244820 | Msa1281370 | -0.810398 | 1.175900e-50 | -8.615850e-47 |
| Msa0256410 | Msa1281370 | -0.807592 | 4.688843e-50 | -8.615850e-47 |
| Msa0260470 | Msa1281370 | -0.811299 | 7.503382e-51 | -8.615850e-47 |
| Msa0260980 | Msa1281370 | 0.826490 | 2.636011e-54 | -8.615850e-47 |
| Msa0264420 | Msa1281370 | -0.856074 | 4.112428e-62 | -8.615850e-47 |
| Msa0267710 | Msa1281370 | 0.802217 | 6.228683e-49 | -8.615850e-47 |
| Msa0273360 | Msa1281370 | 0.806996 | 6.271854e-50 | -8.615850e-47 |
| Msa0295850 | Msa1281370 | -0.812826 | 3.487682e-51 | -8.615850e-47 |
| Msa0298270 | Msa1281370 | 0.808034 | 3.776040e-50 | -8.615850e-47 |
| Msa0300670 | Msa1281370 | -0.808782 | 2.615451e-50 | -8.615850e-47 |
| Msa0302310 | Msa1281370 | -0.844018 | 9.804609e-59 | -8.615850e-47 |
| Msa0303920 | Msa1281370 | 0.814882 | 1.228194e-51 | -8.615850e-47 |
| Msa0304110 | Msa1281370 | -0.812479 | 4.151998e-51 | -8.615850e-47 |
| Msa0319690 | Msa1281370 | 0.845099 | 5.014682e-59 | -8.615850e-47 |
| Msa0336520 | Msa1281370 | 0.803603 | 3.221189e-49 | -8.615850e-47 |
| Msa0337760 | Msa1281370 | -0.801139 | 1.036517e-48 | -8.615850e-47 |
| Msa0338680 | Msa1281370 | 0.837497 | 5.019098e-57 | -8.615850e-47 |
| Msa0339560 | Msa1281370 | -0.801916 | 7.185612e-49 | -8.615850e-47 |
| Msa0339670 | Msa1281370 | -0.851142 | 1.075751e-60 | -8.615850e-47 |
| Msa0341190 | Msa1281370 | -0.807838 | 4.155916e-50 | -8.615850e-47 |
| Msa0343370 | Msa1281370 | -0.821305 | 4.332659e-53 | -8.615850e-47 |
| Msa0349930 | Msa1281370 | 0.832500 | 9.124665e-56 | -8.615850e-47 |
| Msa0352640 | Msa1281370 | -0.805890 | 1.072902e-49 | -8.615850e-47 |
| Msa1108540 | Msa1281370 | 0.803819 | 2.905298e-49 | -8.615850e-47 |
| Msa1120170 | Msa1281370 | 0.808983 | 2.368930e-50 | -8.615850e-47 |
| Msa1124210 | Msa1281370 | 0.834010 | 3.838382e-56 | -8.615850e-47 |
| Msa1125450 | Msa1281370 | -0.836475 | 9.158909e-57 | -8.615850e-47 |
| Msa1127200 | Msa1281370 | 0.811310 | 7.464144e-51 | -8.615850e-47 |
| Msa1127880 | Msa1281370 | 0.815186 | 1.051725e-51 | -8.615850e-47 |
| Msa1128620 | Msa1281370 | 0.818170 | 2.254440e-52 | -8.615850e-47 |
| Msa1129660 | Msa1281370 | -0.800855 | 1.185074e-48 | -8.615850e-47 |
| Msa1130770 | Msa1281370 | 0.818643 | 1.761062e-52 | -8.615850e-47 |
| Msa1134020 | Msa1281370 | 0.801513 | 8.689395e-49 | -8.615850e-47 |
| Msa1134740 | Msa1281370 | 0.831291 | 1.814163e-55 | -8.615850e-47 |
| Msa1141250 | Msa1281370 | 0.811133 | 8.152985e-51 | -8.615850e-47 |
| Msa1148930 | Msa1281370 | 0.818085 | 2.356571e-52 | -8.615850e-47 |
| Msa1150860 | Msa1281370 | 0.815808 | 7.644911e-52 | -8.615850e-47 |
| Msa1152290 | Msa1281370 | 0.805165 | 1.523106e-49 | -8.615850e-47 |
| Msa1164570 | Msa1281370 | -0.835346 | 1.770108e-56 | -8.615850e-47 |
| Msa1180840 | Msa1281370 | 0.829631 | 4.619750e-55 | -8.615850e-47 |
| Msa1185870 | Msa1281370 | 0.853727 | 1.974125e-61 | -8.615850e-47 |
| Msa1186260 | Msa1281370 | 0.800796 | 1.218045e-48 | -8.615850e-47 |
| Msa1211260 | Msa1281370 | -0.821295 | 4.356260e-53 | -8.615850e-47 |
| Msa1211300 | Msa1281370 | -0.809934 | 1.480001e-50 | -8.615850e-47 |
| Msa1211390 | Msa1281370 | -0.817014 | 4.108046e-52 | -8.615850e-47 |
| Msa1214960 | Msa1281370 | 0.809902 | 1.503864e-50 | -8.615850e-47 |
| Msa0491760 | Msa1281370 | 0.828025 | 1.130839e-54 | -8.615850e-47 |
| Msa0491770 | Msa1281370 | 0.805422 | 1.345074e-49 | -8.615850e-47 |
| Msa0500420 | Msa1281370 | 0.822723 | 2.033987e-53 | -8.615850e-47 |
| Msa0508580 | Msa1281370 | 0.826308 | 2.912783e-54 | -8.615850e-47 |
| Msa0521940 | Msa1281370 | 0.820670 | 6.068268e-53 | -8.615850e-47 |
| Msa0528310 | Msa1281370 | 0.802510 | 5.422861e-49 | -8.615850e-47 |
| Msa0529360 | Msa1281370 | 0.847720 | 9.671022e-60 | -8.615850e-47 |
| Msa0530660 | Msa1281370 | 0.815479 | 9.053552e-52 | -8.615850e-47 |
| Msa0546370 | Msa1281370 | -0.808535 | 2.953140e-50 | -8.615850e-47 |
| Msa0547200 | Msa1281370 | 0.847680 | 9.921225e-60 | -8.615850e-47 |
| Msa0566460 | Msa1281370 | 0.823997 | 1.024433e-53 | -8.615850e-47 |
| Msa0568460 | Msa1281370 | -0.802102 | 6.580114e-49 | -8.615850e-47 |
| Msa0584970 | Msa1281370 | 0.804884 | 1.743008e-49 | -8.615850e-47 |
| Msa0587180 | Msa1281370 | 0.817364 | 3.426227e-52 | -8.615850e-47 |
| Msa0601920 | Msa1281370 | 0.867782 | 1.061517e-65 | -8.615850e-47 |
| Msa0602050 | Msa1281370 | 0.815604 | 8.488822e-52 | -8.615850e-47 |
| Msa0846900 | Msa1281370 | 0.845025 | 5.251879e-59 | -8.615850e-47 |
| Msa0850600 | Msa1281370 | 0.815070 | 1.116283e-51 | -8.615850e-47 |
| Msa0852620 | Msa1281370 | 0.829340 | 5.438150e-55 | -8.615850e-47 |
| Msa0853150 | Msa1281370 | -0.800242 | 1.580093e-48 | -8.615850e-47 |
| Msa0871310 | Msa1281370 | -0.802598 | 5.199094e-49 | -8.615850e-47 |
| Msa0893840 | Msa1281370 | 0.808019 | 3.803748e-50 | -8.615850e-47 |
| Msa0899730 | Msa1281370 | -0.833354 | 5.597472e-56 | -8.615850e-47 |
| Msa0902340 | Msa1281370 | 0.816854 | 4.460557e-52 | -8.615850e-47 |
| Msa0910830 | Msa1281370 | 0.810019 | 1.419417e-50 | -8.615850e-47 |
| Msa0924490 | Msa1281370 | 0.816395 | 5.654637e-52 | -8.615850e-47 |
| Msa0932140 | Msa1281370 | 0.800160 | 1.641892e-48 | -8.615850e-47 |
| Msa0932150 | Msa1281370 | 0.832335 | 1.002750e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281370 | MtrunA17_Chr8g0352031 | 98.356 | 365 | 6 | 0 | 1 | 365 | 1 | 365 | 0.0 | 732 |
| Msa1281370 | MtrunA17_Chr3g0088301 | 82.308 | 390 | 43 | 4 | 1 | 365 | 1 | 389 | 0.0 | 615 |
| Msa1281370 | MtrunA17_Chr4g0040341 | 75.134 | 374 | 79 | 5 | 1 | 364 | 1 | 370 | 0.0 | 525 |
| Msa1281370 | MtrunA17_Chr2g0328891 | 73.481 | 362 | 87 | 3 | 6 | 365 | 8 | 362 | 3.36e-176 | 494 |
| Msa1281370 | MtrunA17_Chr8g0393031 | 59.722 | 288 | 115 | 1 | 67 | 354 | 17 | 303 | 5.53e-126 | 365 |
| Msa1281370 | MtrunA17_Chr3g0135801 | 39.604 | 303 | 170 | 7 | 63 | 358 | 29 | 325 | 6.25e-69 | 219 |
| Msa1281370 | MtrunA17_Chr3g0135861 | 30.868 | 311 | 178 | 9 | 64 | 352 | 31 | 326 | 8.20e-34 | 128 |
| Msa1281370 | MtrunA17_Chr6g0488081 | 28.094 | 299 | 195 | 7 | 64 | 352 | 15 | 303 | 2.11e-30 | 118 |
| Msa1281370 | MtrunA17_Chr4g0006851 | 32.281 | 285 | 169 | 8 | 68 | 349 | 89 | 352 | 4.87e-28 | 113 |
| Msa1281370 | MtrunA17_Chr8g0347451 | 28.618 | 304 | 179 | 9 | 62 | 339 | 45 | 336 | 4.38e-27 | 110 |
| Msa1281370 | MtrunA17_Chr8g0347451 | 26.108 | 203 | 132 | 6 | 71 | 261 | 157 | 353 | 5.85e-11 | 63.2 |
| Msa1281370 | MtrunA17_Chr5g0396801 | 28.197 | 305 | 167 | 9 | 67 | 339 | 37 | 321 | 5.25e-27 | 109 |
| Msa1281370 | MtrunA17_Chr7g0240341 | 27.815 | 302 | 198 | 8 | 65 | 355 | 22 | 314 | 1.29e-25 | 105 |
| Msa1281370 | MtrunA17_Chr7g0242311 | 30.634 | 284 | 165 | 9 | 79 | 355 | 98 | 356 | 7.24e-25 | 104 |
| Msa1281370 | MtrunA17_Chr1g0149111 | 29.329 | 283 | 171 | 9 | 68 | 344 | 139 | 398 | 9.77e-25 | 104 |
| Msa1281370 | MtrunA17_Chr1g0149111 | 28.774 | 212 | 127 | 7 | 56 | 262 | 219 | 411 | 4.86e-14 | 72.8 |
| Msa1281370 | MtrunA17_Chr3g0137941 | 27.148 | 291 | 186 | 9 | 71 | 356 | 125 | 394 | 2.01e-24 | 103 |
| Msa1281370 | MtrunA17_Chr3g0137941 | 28.440 | 218 | 132 | 7 | 56 | 268 | 202 | 400 | 3.22e-15 | 76.3 |
| Msa1281370 | MtrunA17_Chr7g0252401 | 29.553 | 291 | 161 | 7 | 68 | 344 | 207 | 467 | 3.03e-24 | 103 |
| Msa1281370 | MtrunA17_Chr8g0385571 | 28.975 | 283 | 176 | 8 | 68 | 344 | 227 | 490 | 4.20e-24 | 103 |
| Msa1281370 | MtrunA17_Chr3g0131501 | 28.269 | 283 | 178 | 8 | 68 | 344 | 205 | 468 | 4.69e-23 | 100 |
| Msa1281370 | MtrunA17_Chr5g0436041 | 24.919 | 309 | 210 | 8 | 58 | 355 | 24 | 321 | 6.50e-23 | 97.8 |
| Msa1281370 | MtrunA17_Chr4g0063561 | 25.000 | 300 | 162 | 7 | 68 | 344 | 123 | 382 | 1.71e-22 | 97.8 |
| Msa1281370 | MtrunA17_Chr4g0063561 | 27.619 | 210 | 127 | 5 | 58 | 262 | 206 | 395 | 1.18e-15 | 77.8 |
| Msa1281370 | MtrunA17_Chr4g0067231 | 25.455 | 330 | 198 | 8 | 58 | 351 | 4 | 321 | 2.08e-22 | 96.7 |
| Msa1281370 | MtrunA17_Chr2g0296061 | 27.476 | 313 | 181 | 9 | 71 | 349 | 18 | 318 | 3.30e-22 | 95.9 |
| Msa1281370 | MtrunA17_Chr3g0115801 | 26.936 | 297 | 170 | 10 | 71 | 344 | 119 | 391 | 1.75e-18 | 86.3 |
| Msa1281370 | MtrunA17_Chr5g0411411 | 27.241 | 290 | 187 | 10 | 62 | 339 | 3 | 280 | 1.48e-17 | 82.0 |
| Msa1281370 | MtrunA17_Chr4g0000261 | 24.503 | 302 | 183 | 8 | 65 | 344 | 63 | 341 | 6.89e-17 | 80.9 |
| Msa1281370 | MtrunA17_Chr8g0366791 | 26.207 | 290 | 190 | 9 | 62 | 339 | 3 | 280 | 6.21e-16 | 77.4 |
| Msa1281370 | MtrunA17_Chr4g0004571 | 27.049 | 244 | 163 | 5 | 113 | 349 | 51 | 286 | 7.30e-16 | 77.4 |
| Msa1281370 | MtrunA17_Chr3g0133111 | 25.418 | 299 | 181 | 10 | 68 | 337 | 6 | 291 | 9.71e-15 | 74.3 |
| Msa1281370 | MtrunA17_Chr1g0196921 | 21.691 | 272 | 200 | 5 | 63 | 330 | 9 | 271 | 1.79e-14 | 73.2 |
| Msa1281370 | MtrunA17_Chr2g0331771 | 24.662 | 296 | 200 | 7 | 63 | 349 | 146 | 427 | 2.21e-14 | 73.9 |
| Msa1281370 | MtrunA17_Chr7g0241521 | 24.453 | 274 | 189 | 7 | 63 | 330 | 12 | 273 | 2.49e-14 | 72.8 |
| Msa1281370 | MtrunA17_Chr6g0488341 | 26.122 | 245 | 151 | 8 | 116 | 352 | 6 | 228 | 5.61e-14 | 70.9 |
| Msa1281370 | MtrunA17_Chr4g0008061 | 24.638 | 276 | 186 | 9 | 63 | 330 | 10 | 271 | 3.44e-13 | 69.7 |
| Msa1281370 | MtrunA17_Chr8g0382201 | 23.232 | 297 | 181 | 9 | 71 | 344 | 198 | 470 | 6.60e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281370 | AT5G13490.1 | 79.221 | 385 | 60 | 3 | 1 | 365 | 1 | 385 | 0.0 | 588 |
| Msa1281370 | AT5G13490.2 | 79.221 | 385 | 60 | 3 | 1 | 365 | 1 | 385 | 0.0 | 588 |
| Msa1281370 | AT3G08580.2 | 81.984 | 383 | 49 | 5 | 1 | 365 | 1 | 381 | 0.0 | 575 |
| Msa1281370 | AT3G08580.1 | 81.984 | 383 | 49 | 5 | 1 | 365 | 1 | 381 | 0.0 | 575 |
| Msa1281370 | AT4G28390.1 | 74.406 | 379 | 80 | 5 | 2 | 364 | 1 | 378 | 0.0 | 528 |
| Msa1281370 | AT4G28390.2 | 74.406 | 379 | 80 | 5 | 2 | 364 | 1 | 378 | 0.0 | 528 |
| Msa1281370 | AT5G17400.1 | 62.887 | 291 | 107 | 1 | 64 | 354 | 10 | 299 | 7.46e-130 | 374 |
| Msa1281370 | AT5G56450.1 | 38.710 | 310 | 170 | 7 | 55 | 352 | 21 | 322 | 6.56e-67 | 214 |
| Msa1281370 | AT2G37890.1 | 29.846 | 325 | 207 | 8 | 43 | 355 | 17 | 332 | 4.31e-32 | 123 |
| Msa1281370 | AT4G26180.1 | 31.650 | 297 | 171 | 10 | 64 | 344 | 17 | 297 | 1.63e-31 | 122 |
| Msa1281370 | AT3G55640.1 | 28.041 | 296 | 195 | 7 | 67 | 353 | 37 | 323 | 2.28e-31 | 121 |
| Msa1281370 | AT3G55640.1 | 25.628 | 199 | 129 | 4 | 63 | 258 | 140 | 322 | 5.83e-13 | 69.7 |
| Msa1281370 | AT3G55640.4 | 28.041 | 296 | 195 | 7 | 67 | 353 | 37 | 323 | 2.28e-31 | 121 |
| Msa1281370 | AT3G55640.4 | 25.628 | 199 | 129 | 4 | 63 | 258 | 140 | 322 | 5.83e-13 | 69.7 |
| Msa1281370 | AT4G26180.2 | 31.959 | 291 | 166 | 10 | 64 | 338 | 17 | 291 | 9.90e-31 | 119 |
| Msa1281370 | AT1G14560.1 | 30.605 | 281 | 170 | 7 | 79 | 344 | 38 | 308 | 1.76e-30 | 119 |
| Msa1281370 | AT1G14560.2 | 30.909 | 275 | 165 | 7 | 79 | 338 | 38 | 302 | 8.76e-30 | 116 |
| Msa1281370 | AT3G53940.1 | 30.068 | 296 | 186 | 8 | 60 | 344 | 63 | 348 | 2.36e-29 | 116 |
| Msa1281370 | AT3G53940.1 | 27.619 | 210 | 129 | 5 | 61 | 263 | 169 | 362 | 1.71e-13 | 71.2 |
| Msa1281370 | AT3G51870.1 | 30.986 | 284 | 164 | 9 | 79 | 355 | 102 | 360 | 1.92e-26 | 108 |
| Msa1281370 | AT4G01100.1 | 27.508 | 309 | 168 | 9 | 71 | 344 | 45 | 332 | 3.75e-26 | 107 |
| Msa1281370 | AT5G01500.1 | 29.927 | 274 | 168 | 9 | 79 | 349 | 130 | 382 | 5.13e-25 | 105 |
| Msa1281370 | AT4G32400.1 | 29.078 | 282 | 173 | 9 | 68 | 344 | 114 | 373 | 7.85e-25 | 104 |
| Msa1281370 | AT4G01100.2 | 27.707 | 314 | 175 | 10 | 71 | 344 | 45 | 346 | 1.94e-24 | 103 |
| Msa1281370 | AT4G01100.3 | 26.733 | 303 | 166 | 9 | 77 | 344 | 1 | 282 | 5.32e-24 | 100 |
| Msa1281370 | AT5G51050.1 | 29.537 | 281 | 174 | 7 | 68 | 344 | 223 | 483 | 2.22e-23 | 101 |
| Msa1281370 | AT3G21390.1 | 26.852 | 324 | 197 | 7 | 58 | 349 | 9 | 324 | 9.00e-22 | 95.1 |
| Msa1281370 | AT5G61810.2 | 27.273 | 297 | 184 | 7 | 52 | 344 | 52 | 320 | 9.92e-22 | 95.1 |
| Msa1281370 | AT3G21390.2 | 26.852 | 324 | 197 | 7 | 58 | 349 | 31 | 346 | 1.25e-21 | 95.1 |
| Msa1281370 | AT5G61810.1 | 26.578 | 301 | 181 | 7 | 52 | 344 | 195 | 463 | 5.21e-21 | 94.4 |
| Msa1281370 | AT3G20240.1 | 24.324 | 296 | 187 | 6 | 67 | 344 | 51 | 327 | 1.02e-20 | 92.4 |
| Msa1281370 | AT5G07320.1 | 27.306 | 271 | 170 | 6 | 77 | 344 | 218 | 464 | 1.46e-20 | 93.2 |
| Msa1281370 | AT3G55640.2 | 28.061 | 196 | 128 | 3 | 67 | 258 | 37 | 223 | 2.30e-20 | 89.7 |
| Msa1281370 | AT3G55640.3 | 28.061 | 196 | 128 | 3 | 67 | 258 | 37 | 223 | 2.30e-20 | 89.7 |
| Msa1281370 | AT1G14560.3 | 31.915 | 188 | 112 | 5 | 172 | 344 | 24 | 210 | 2.83e-20 | 89.0 |
| Msa1281370 | AT5G48970.1 | 25.153 | 326 | 201 | 8 | 58 | 349 | 12 | 328 | 4.19e-19 | 87.8 |
| Msa1281370 | AT3G53940.2 | 29.386 | 228 | 143 | 6 | 60 | 279 | 63 | 280 | 3.36e-18 | 84.3 |
| Msa1281370 | AT5G46800.2 | 28.125 | 288 | 180 | 10 | 67 | 339 | 7 | 282 | 5.82e-16 | 78.2 |
| Msa1281370 | AT5G46800.3 | 28.125 | 288 | 180 | 10 | 67 | 339 | 7 | 282 | 5.82e-16 | 78.2 |
| Msa1281370 | AT5G46800.1 | 28.125 | 288 | 180 | 10 | 67 | 339 | 7 | 282 | 5.82e-16 | 78.2 |
| Msa1281370 | AT5G64970.1 | 25.676 | 296 | 175 | 9 | 71 | 344 | 138 | 410 | 6.57e-15 | 75.9 |
| Msa1281370 | AT5G64970.2 | 25.000 | 296 | 177 | 9 | 71 | 344 | 14 | 286 | 2.52e-14 | 73.2 |
| Msa1281370 | AT5G64970.3 | 25.952 | 289 | 169 | 9 | 71 | 337 | 138 | 403 | 6.38e-14 | 72.8 |
| Msa1281370 | AT5G48970.2 | 25.098 | 255 | 157 | 7 | 121 | 349 | 11 | 257 | 1.89e-13 | 70.1 |
| Msa1281370 | AT3G54110.1 | 23.792 | 269 | 187 | 8 | 68 | 330 | 15 | 271 | 2.26e-13 | 70.5 |
| Msa1281370 | AT1G14140.1 | 23.420 | 269 | 190 | 7 | 68 | 330 | 16 | 274 | 9.80e-13 | 68.6 |
| Msa1281370 | AT1G14140.1 | 27.411 | 197 | 128 | 5 | 173 | 359 | 18 | 209 | 7.47e-11 | 63.2 |
| Msa1281370 | AT5G58970.1 | 23.973 | 292 | 192 | 8 | 58 | 337 | 6 | 279 | 1.27e-12 | 68.2 |
| Msa1281370 | AT5G66380.1 | 27.136 | 199 | 134 | 5 | 166 | 359 | 5 | 197 | 1.66e-12 | 67.8 |
| Msa1281370 | AT1G79900.1 | 26.860 | 242 | 153 | 7 | 115 | 349 | 53 | 277 | 4.72e-12 | 66.6 |
| Msa1281370 | AT5G01340.1 | 27.473 | 182 | 115 | 4 | 59 | 236 | 106 | 274 | 1.22e-11 | 65.5 |
| Msa1281370 | AT2G33820.1 | 22.623 | 305 | 218 | 7 | 64 | 359 | 14 | 309 | 1.50e-11 | 65.1 |
| Msa1281370 | AT1G78180.1 | 24.000 | 300 | 175 | 8 | 71 | 344 | 131 | 403 | 9.14e-11 | 63.5 |
Find 134 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGTGCTAAGTCCTTGTTTA+AGG | 0.144348 | 8_3:+20869554 | Msa1281370:CDS |
| TAATCATCTCATCCTGGTTT+TGG | 0.193782 | 8_3:-20868051 | None:intergenic |
| TTGAAGCCAGTTCTCCTTAC+TGG | 0.211857 | 8_3:+20868823 | Msa1281370:CDS |
| TTCTTTGCTAGCTTTGGTCT+TGG | 0.283922 | 8_3:+20869396 | Msa1281370:CDS |
| TTTCTATCTATTTACTGTTC+AGG | 0.291392 | 8_3:+20869934 | Msa1281370:three_prime_UTR |
| AATGCCGCAGCTAGAACTTT+GGG | 0.316378 | 8_3:-20866188 | None:intergenic |
| GAAACTCAAATCAAACAAAA+TGG | 0.317317 | 8_3:-20869887 | None:intergenic |
| GGCTTTGAACTTTGCATTCA+AGG | 0.320951 | 8_3:+20868480 | Msa1281370:intron |
| GCGGGAGCTGCAACAAAGAT+AGG | 0.324862 | 8_3:-20867929 | None:intergenic |
| CTTCTCCTAACTGTGTCAAT+TGG | 0.336850 | 8_3:-20869456 | None:intergenic |
| CCTCGTTCTTGAGGATTTGT+TGG | 0.337740 | 8_3:-20869533 | None:intergenic |
| CCACATTCTGAACGAGATTA+GGG | 0.346073 | 8_3:-20867796 | None:intergenic |
| GATAGTTTCTTTGCTAGCTT+TGG | 0.347055 | 8_3:+20869390 | Msa1281370:CDS |
| ACAAGGATGGTTACTGGAAA+TGG | 0.366913 | 8_3:+20868536 | Msa1281370:CDS |
| AGAAGGACAAGGATGGTTAC+TGG | 0.382727 | 8_3:+20868530 | Msa1281370:CDS |
| CTTTGTTGTTGACTTTCTCA+TGG | 0.384159 | 8_3:+20867964 | Msa1281370:CDS |
| CAAAAGCTTAATTCGTTCAA+TGG | 0.387505 | 8_3:-20868026 | None:intergenic |
| CTGGCAACTGATGGTATTGC+TGG | 0.388315 | 8_3:+20868724 | Msa1281370:CDS |
| ATGTACCAAAGGAGGTCATT+TGG | 0.389033 | 8_3:+20867839 | Msa1281370:CDS |
| CTCCGTGCCGTCGCTGGTGC+TGG | 0.395301 | 8_3:+20869594 | Msa1281370:CDS |
| TTGGCCTCAGGAGGTGCTGC+TGG | 0.402435 | 8_3:+20868571 | Msa1281370:CDS |
| ACAGTCACCGATTCCCTTGT+AGG | 0.403293 | 8_3:-20868095 | None:intergenic |
| CGCTGGTTACGACAAGTTAC+AGG | 0.404370 | 8_3:+20869623 | Msa1281370:CDS |
| AACATCCTCCGTGCCGTCGC+TGG | 0.404618 | 8_3:+20869588 | Msa1281370:CDS |
| GCCACATTCTGAACGAGATT+AGG | 0.405088 | 8_3:-20867797 | None:intergenic |
| AAATGCCGCAGCTAGAACTT+TGG | 0.406078 | 8_3:-20866189 | None:intergenic |
| TGTACCAAAGGAGGTCATTT+GGG | 0.407077 | 8_3:+20867840 | Msa1281370:CDS |
| GAAAGTCACCATGGTTGATC+AGG | 0.415292 | 8_3:+20867766 | Msa1281370:exon |
| GGTGCTAAGTCCTTGTTTAA+GGG | 0.416541 | 8_3:+20869555 | Msa1281370:CDS |
| GCGTTACATGCTGGCATCAT+TGG | 0.421080 | 8_3:-20867890 | None:intergenic |
| CTTACCCAATTGACACAGTT+AGG | 0.421944 | 8_3:+20869451 | Msa1281370:CDS |
| TTGCTAGCTTTGGTCTTGGA+TGG | 0.425017 | 8_3:+20869400 | Msa1281370:CDS |
| TGGCTCATCACCAATGGTGC+AGG | 0.431380 | 8_3:+20869420 | Msa1281370:CDS |
| TTCTCCTAACTGTGTCAATT+GGG | 0.432018 | 8_3:-20869455 | None:intergenic |
| TGGTGGCTGCGCGAGTTTGT+TGG | 0.432992 | 8_3:-20866221 | None:intergenic |
| GCGCGAGTTTGTTGGAGACT+TGG | 0.433533 | 8_3:-20866213 | None:intergenic |
| GAAATGGTTTGCTGGAAACT+TGG | 0.433799 | 8_3:+20868552 | Msa1281370:CDS |
| CAAGGGAGTAGACAAAGAAA+AGG | 0.433806 | 8_3:-20868603 | None:intergenic |
| AACTCCCAAATGACCTCCTT+TGG | 0.434011 | 8_3:-20867844 | None:intergenic |
| AAAAGCTTAATTCGTTCAAT+GGG | 0.436520 | 8_3:-20868025 | None:intergenic |
| AAGTCCTTGTTTAAGGGAGC+TGG | 0.439974 | 8_3:+20869561 | Msa1281370:CDS |
| CTTTGCATCATTTGCTAGAC+GGG | 0.443087 | 8_3:-20868638 | None:intergenic |
| GGTTACTGGAAATGGTTTGC+TGG | 0.444417 | 8_3:+20868544 | Msa1281370:CDS |
| GTTCAATAATTAGTACTCAA+TGG | 0.446310 | 8_3:+20869781 | Msa1281370:three_prime_UTR |
| ATCATTGGATACTGAAATGC+AGG | 0.450957 | 8_3:-20867875 | None:intergenic |
| AGAAGAATGATGATGACATC+TGG | 0.454405 | 8_3:+20869474 | Msa1281370:CDS |
| AGAGATCCAGTAAGGAGAAC+TGG | 0.459442 | 8_3:-20868829 | None:intergenic |
| TGTTCTTCATTTACCCACTA+AGG | 0.465015 | 8_3:+20866301 | Msa1281370:five_prime_UTR |
| AAGCGAACAACGGCCGATGA+AGG | 0.465896 | 8_3:+20868121 | Msa1281370:CDS |
| GTTGTTGCAGCGTTACATGC+TGG | 0.471689 | 8_3:-20867899 | None:intergenic |
| TCTCCTTACTGGATCTCTGC+AGG | 0.476142 | 8_3:+20868834 | Msa1281370:CDS |
| AGATGCTAGCCCTGCACCAT+TGG | 0.477482 | 8_3:-20869430 | None:intergenic |
| GTTGCAGCTCCCGCTGAGAA+AGG | 0.477911 | 8_3:+20867938 | Msa1281370:CDS |
| CGGGAGCTGCAACAAAGATA+GGG | 0.484005 | 8_3:-20867928 | None:intergenic |
| TTGCGGTGTTACCTCTCCAT+AGG | 0.487772 | 8_3:-20868153 | None:intergenic |
| GTGTATCGTGGTCTCTACTT+TGG | 0.490767 | 8_3:+20868787 | Msa1281370:CDS |
| CAGCTTTAATCATCTCATCC+TGG | 0.491287 | 8_3:-20868057 | None:intergenic |
| ATGTAATAGAATGAGAGGTT+AGG | 0.492135 | 8_3:-20866278 | None:intergenic |
| TTTGCTGGAAACTTGGCCTC+AGG | 0.497193 | 8_3:+20868559 | Msa1281370:CDS |
| AGTAAGGAGAACTGGCTTCA+AGG | 0.497841 | 8_3:-20868821 | None:intergenic |
| GTTGTTGACTTTCTCATGGG+TGG | 0.497881 | 8_3:+20867968 | Msa1281370:CDS |
| AGAACTCAACTAACCTGAGT+AGG | 0.498897 | 8_3:-20868193 | None:intergenic |
| TTTGTTGTTGACTTTCTCAT+GGG | 0.500591 | 8_3:+20867965 | Msa1281370:CDS |
| GATGCAAAGGCTGCAAAGAA+AGG | 0.508474 | 8_3:+20868652 | Msa1281370:CDS |
| CATCCGTTATTTCCCTACTC+AGG | 0.512437 | 8_3:+20868180 | Msa1281370:CDS |
| GCTGGTGCTGGTGTGCTCGC+TGG | 0.514183 | 8_3:+20869606 | Msa1281370:CDS |
| ACAAAGTTTCCTTTCTCAGC+GGG | 0.514560 | 8_3:-20867947 | None:intergenic |
| AGATGTTGAAACCACGGTAA+AGG | 0.516865 | 8_3:-20868747 | None:intergenic |
| CCCTAATCTCGTTCAGAATG+TGG | 0.518809 | 8_3:+20867796 | Msa1281370:CDS |
| CAGAATGTGGCACGCCAGAC+CGG | 0.519206 | 8_3:+20867809 | Msa1281370:CDS |
| CTCGGCAAGAAGTACGGATC+CGG | 0.520238 | 8_3:+20869654 | Msa1281370:CDS |
| TAACCTGAGTAGGGAAATAA+CGG | 0.524143 | 8_3:-20868183 | None:intergenic |
| CCTTTGCATCATTTGCTAGA+CGG | 0.524216 | 8_3:-20868639 | None:intergenic |
| TCTGAGCCCTACAAGGGAAT+CGG | 0.525862 | 8_3:+20868088 | Msa1281370:CDS |
| GCTGGAAACTTGGCCTCAGG+AGG | 0.526095 | 8_3:+20868562 | Msa1281370:CDS |
| TGGATACTGAAATGCAGGGT+TGG | 0.528389 | 8_3:-20867870 | None:intergenic |
| ATGCCGCAGCTAGAACTTTG+GGG | 0.528677 | 8_3:-20866187 | None:intergenic |
| TAGACTTTCTGAGCCCTACA+AGG | 0.529188 | 8_3:+20868081 | Msa1281370:CDS |
| ATGAAGGTATTGTCTCCCTA+TGG | 0.529311 | 8_3:+20868137 | Msa1281370:CDS |
| ATAATGCTCGGCAAGAAGTA+CGG | 0.537875 | 8_3:+20869648 | Msa1281370:CDS |
| TGCGGTGTTACCTCTCCATA+GGG | 0.537902 | 8_3:-20868152 | None:intergenic |
| AAGGCTGCAAAGAAAGGTGC+AGG | 0.538988 | 8_3:+20868658 | Msa1281370:CDS |
| CAGTCACCGATTCCCTTGTA+GGG | 0.546422 | 8_3:-20868094 | None:intergenic |
| ACTTAGCACCCTCGTTCTTG+AGG | 0.547097 | 8_3:-20869542 | None:intergenic |
| TAGGGAGACAATACCTTCAT+CGG | 0.549059 | 8_3:-20868134 | None:intergenic |
| GGTTTCAACATCTCTTGTGT+CGG | 0.553553 | 8_3:+20868757 | Msa1281370:CDS |
| AAGGGAGTAGACAAAGAAAA+GGG | 0.554552 | 8_3:-20868602 | None:intergenic |
| TCGTTCAATGGGAGCTGCAG+CGG | 0.558742 | 8_3:-20868014 | None:intergenic |
| GAACTCAACTAACCTGAGTA+GGG | 0.561724 | 8_3:-20868192 | None:intergenic |
| GAAATAACGGATGACATTTG+CGG | 0.563798 | 8_3:-20868170 | None:intergenic |
| CAGGATGAGATGATTAAAGC+TGG | 0.564426 | 8_3:+20868058 | Msa1281370:CDS |
| GAACAATGTAATAGAATGAG+AGG | 0.565315 | 8_3:-20866283 | None:intergenic |
| AACAAAGTTTCCTTTCTCAG+CGG | 0.567621 | 8_3:-20867948 | None:intergenic |
| CACCAGCACCAGCGACGGCA+CGG | 0.568903 | 8_3:-20869596 | None:intergenic |
| GAGCACACCAGCACCAGCGA+CGG | 0.570287 | 8_3:-20869601 | None:intergenic |
| GACGGGTACGAGCATAGTCA+AGG | 0.572808 | 8_3:-20868621 | None:intergenic |
| CTTGGATGGCTCATCACCAA+TGG | 0.573594 | 8_3:+20869414 | Msa1281370:CDS |
| GGTACATAGAAAGACCGGTC+TGG | 0.575870 | 8_3:-20867823 | None:intergenic |
| AAGTTACAGGTCATAATGCT+CGG | 0.582137 | 8_3:+20869636 | Msa1281370:CDS |
| GATTTGTTGGAATGCATCGA+AGG | 0.585302 | 8_3:-20869520 | None:intergenic |
| CATTCAAGGACTACTTCAAG+AGG | 0.587339 | 8_3:+20868494 | Msa1281370:CDS |
| AAAACAAAAGTATGAATCAG+AGG | 0.588888 | 8_3:-20869700 | None:intergenic |
| TGAGAATTGACCAAGTCTTG+CGG | 0.597971 | 8_3:+20869750 | Msa1281370:three_prime_UTR |
| GAAATGAAAATGAGTGTTGG+TGG | 0.598283 | 8_3:-20866238 | None:intergenic |
| CCGGTCTTTCTATGTACCAA+AGG | 0.601233 | 8_3:+20867828 | Msa1281370:CDS |
| CCGTCTAGCAAATGATGCAA+AGG | 0.603443 | 8_3:+20868639 | Msa1281370:CDS |
| TGCCGCAGCTAGAACTTTGG+GGG | 0.603756 | 8_3:-20866186 | None:intergenic |
| GGCTCATCACCAATGGTGCA+GGG | 0.604403 | 8_3:+20869421 | Msa1281370:CDS |
| GAACCTGCAGAGATCCAGTA+AGG | 0.606430 | 8_3:-20868837 | None:intergenic |
| GGCAAGAAGTACGGATCCGG+TGG | 0.611623 | 8_3:+20869657 | Msa1281370:CDS |
| AAGAAGACACTGGCAACTGA+TGG | 0.618722 | 8_3:+20868715 | Msa1281370:CDS |
| AATTTCAAGAAGGACAAGGA+TGG | 0.620049 | 8_3:+20868523 | Msa1281370:CDS |
| AGCACCAGCAGCACCTCCTG+AGG | 0.623751 | 8_3:-20868575 | None:intergenic |
| TTTCAATTTCAAGAAGGACA+AGG | 0.627092 | 8_3:+20868519 | Msa1281370:CDS |
| CCTTTGGTACATAGAAAGAC+CGG | 0.627821 | 8_3:-20867828 | None:intergenic |
| CACAAGAGATGTTGAAACCA+CGG | 0.637635 | 8_3:-20868753 | None:intergenic |
| GGGAGCTGCAACAAAGATAG+GGG | 0.642711 | 8_3:-20867927 | None:intergenic |
| CCAACAAATCCTCAAGAACG+AGG | 0.645399 | 8_3:+20869533 | Msa1281370:CDS |
| GCTGCAAAGAAAGGTGCAGG+AGG | 0.645640 | 8_3:+20868661 | Msa1281370:CDS |
| TAGGAAATGAAAATGAGTGT+TGG | 0.653882 | 8_3:-20866241 | None:intergenic |
| GGTATTGCTGGCCTTTACCG+TGG | 0.654046 | 8_3:+20868736 | Msa1281370:CDS |
| AGACTTTCTGAGCCCTACAA+GGG | 0.654879 | 8_3:+20868082 | Msa1281370:CDS |
| AGCACCAGCTCCCTTAAACA+AGG | 0.655144 | 8_3:-20869565 | None:intergenic |
| GTCGGAATCATTGTGTATCG+TGG | 0.657764 | 8_3:+20868775 | Msa1281370:CDS |
| GGTATTGTCTCCCTATGGAG+AGG | 0.663367 | 8_3:+20868142 | Msa1281370:CDS |
| ACGGGTACGAGCATAGTCAA+GGG | 0.668625 | 8_3:-20868620 | None:intergenic |
| GCAGGAGGAAGACAATTCGA+TGG | 0.669093 | 8_3:+20868676 | Msa1281370:CDS |
| GTCTTTCTATGTACCAAAGG+AGG | 0.674751 | 8_3:+20867831 | Msa1281370:CDS |
| ATTGTTCAGGAAAGTCACCA+TGG | 0.678048 | 8_3:+20867757 | Msa1281370:intron |
| GCGCTGAACCTGATCAACCA+TGG | 0.682676 | 8_3:-20867774 | None:intergenic |
| CAACAAATCCTCAAGAACGA+GGG | 0.686427 | 8_3:+20869534 | Msa1281370:CDS |
| CAGCACCAGCGACGGCACGG+AGG | 0.687741 | 8_3:-20869593 | None:intergenic |
| TGATGTCTACAAGAAGACAC+TGG | 0.694165 | 8_3:+20868705 | Msa1281370:CDS |
| TCATTGGATACTGAAATGCA+GGG | 0.721142 | 8_3:-20867874 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATGATTAATCAAAAAAT+GGG | - | chr8_3:20867151-20867170 | None:intergenic | 10.0% |
| !!! | ATTTTTTGATTAATCATTTA+GGG | + | chr8_3:20867151-20867170 | Msa1281370:intron | 10.0% |
| !!! | TCAGAATATTTAATATTTTT+AGG | + | chr8_3:20869823-20869842 | Msa1281370:three_prime_UTR | 10.0% |
| !!! | TTTTTTGCAATATGAAAAAA+TGG | + | chr8_3:20866487-20866506 | Msa1281370:intron | 15.0% |
| !! | CTAAATGATTAATCAAAAAA+TGG | - | chr8_3:20867152-20867171 | None:intergenic | 15.0% |
| !!! | CATTTTTTGATTAATCATTT+AGG | + | chr8_3:20867150-20867169 | Msa1281370:intron | 15.0% |
| !! | TTGTTTATGAACTAAATAAT+TGG | + | chr8_3:20867631-20867650 | Msa1281370:intron | 15.0% |
| !! | AAAGAACTAAAAAATCAAAA+GGG | - | chr8_3:20868228-20868247 | None:intergenic | 15.0% |
| !!! | ATTCTAGTTCATATTAATAT+TGG | + | chr8_3:20869002-20869021 | Msa1281370:intron | 15.0% |
| !!! | ACTCTTGTTTTTTATGAAAT+GGG | + | chr8_3:20866411-20866430 | Msa1281370:intron | 20.0% |
| !! | CAAATAATGTTCAGAAATTA+AGG | - | chr8_3:20867721-20867740 | None:intergenic | 20.0% |
| !! | GAAAGAACTAAAAAATCAAA+AGG | - | chr8_3:20868229-20868248 | None:intergenic | 20.0% |
| !!! | TTTTTAGTTCTTTCAAATAG+AGG | + | chr8_3:20868235-20868254 | Msa1281370:intron | 20.0% |
| !!! | ATTAATATTGGTGTTATTGA+AGG | + | chr8_3:20869014-20869033 | Msa1281370:intron | 20.0% |
| !! | TATCAAAATAGCTAATTCAT+AGG | + | chr8_3:20869219-20869238 | Msa1281370:intron | 20.0% |
| !! | AAATATTCTGATCCAAAAAA+GGG | - | chr8_3:20869814-20869833 | None:intergenic | 20.0% |
| !! | TAAATATTCTGATCCAAAAA+AGG | - | chr8_3:20869815-20869834 | None:intergenic | 20.0% |
| !!! | TTAGGTTTTGTTATTAACCT+AGG | - | chr8_3:20866263-20866282 | None:intergenic | 25.0% |
| ! | GCTAAAAAAACAACAACAAA+AGG | - | chr8_3:20866338-20866357 | None:intergenic | 25.0% |
| ! | TTCATACTGTTGAATTGAAT+TGG | + | chr8_3:20866364-20866383 | Msa1281370:intron | 25.0% |
| !!! | CACTCTTGTTTTTTATGAAA+TGG | + | chr8_3:20866410-20866429 | Msa1281370:intron | 25.0% |
| !! | ATTAGATCTTTTGTGTATGA+TGG | + | chr8_3:20866527-20866546 | Msa1281370:intron | 25.0% |
| ! | TGTAGAATGATGAATATGAA+TGG | + | chr8_3:20866696-20866715 | Msa1281370:intron | 25.0% |
| !!! | ATAGTGTCTTGTTTGTTTAA+GGG | + | chr8_3:20866781-20866800 | Msa1281370:intron | 25.0% |
| ! | GAAAAATACTCAAGAAAACA+TGG | - | chr8_3:20866818-20866837 | None:intergenic | 25.0% |
| !!! | AAGAATGTTATGGACTATTT+TGG | + | chr8_3:20867058-20867077 | Msa1281370:intron | 25.0% |
| !!! | AGAATGTTATGGACTATTTT+GGG | + | chr8_3:20867059-20867078 | Msa1281370:intron | 25.0% |
| !!! | TTTGGGTATTATTTTTTGCA+AGG | + | chr8_3:20867076-20867095 | Msa1281370:intron | 25.0% |
| !!! | TTGGGTATTATTTTTTGCAA+GGG | + | chr8_3:20867077-20867096 | Msa1281370:intron | 25.0% |
| !!! | TTTTTTGCAAGGGATTAAAT+TGG | + | chr8_3:20867087-20867106 | Msa1281370:intron | 25.0% |
| !!! | ATTGTTAGGTTTTTGTTTGT+AGG | + | chr8_3:20867396-20867415 | Msa1281370:intron | 25.0% |
| !!! | TTTTTGTTTCTGACATTGTT+AGG | + | chr8_3:20867598-20867617 | Msa1281370:intron | 25.0% |
| ! | AAAAGCTTAATTCGTTCAAT+GGG | - | chr8_3:20868028-20868047 | None:intergenic | 25.0% |
| !!! | TCATACTAAATAGAGTATTG+CGG | - | chr8_3:20868303-20868322 | None:intergenic | 25.0% |
| ! | ATAAAATGACACAGGATATA+AGG | - | chr8_3:20868937-20868956 | None:intergenic | 25.0% |
| ! | GAATACATATCAACAAAGTT+AGG | - | chr8_3:20868986-20869005 | None:intergenic | 25.0% |
| !! | AAAACAAAAGTATGAATCAG+AGG | - | chr8_3:20869703-20869722 | None:intergenic | 25.0% |
| ! | GTTCAATAATTAGTACTCAA+TGG | + | chr8_3:20869781-20869800 | Msa1281370:three_prime_UTR | 25.0% |
| ! | GAAACTCAAATCAAACAAAA+TGG | - | chr8_3:20869890-20869909 | None:intergenic | 25.0% |
| ! | TTTCTATCTATTTACTGTTC+AGG | + | chr8_3:20869934-20869953 | Msa1281370:three_prime_UTR | 25.0% |
| TAGGAAATGAAAATGAGTGT+TGG | - | chr8_3:20866244-20866263 | None:intergenic | 30.0% | |
| ! | AACACTCATTTTCATTTCCT+AGG | + | chr8_3:20866243-20866262 | Msa1281370:five_prime_UTR | 30.0% |
| ATGTAATAGAATGAGAGGTT+AGG | - | chr8_3:20866281-20866300 | None:intergenic | 30.0% | |
| GAACAATGTAATAGAATGAG+AGG | - | chr8_3:20866286-20866305 | None:intergenic | 30.0% | |
| GGAAAAACAAAAACCTTAGT+GGG | - | chr8_3:20866317-20866336 | None:intergenic | 30.0% | |
| AGGAAAAACAAAAACCTTAG+TGG | - | chr8_3:20866318-20866337 | None:intergenic | 30.0% | |
| !! | CATAGTGTCTTGTTTGTTTA+AGG | + | chr8_3:20866780-20866799 | Msa1281370:intron | 30.0% |
| !! | TAGTGTCTTGTTTGTTTAAG+GGG | + | chr8_3:20866782-20866801 | Msa1281370:intron | 30.0% |
| TGATGAGTGAATACTCAATT+TGG | + | chr8_3:20866925-20866944 | Msa1281370:intron | 30.0% | |
| ! | TCATGACAAGACAATTTTCT+CGG | + | chr8_3:20866948-20866967 | Msa1281370:intron | 30.0% |
| TGTCTCTGTTATAATGAATC+TGG | + | chr8_3:20867015-20867034 | Msa1281370:intron | 30.0% | |
| GTCTCTGTTATAATGAATCT+GGG | + | chr8_3:20867016-20867035 | Msa1281370:intron | 30.0% | |
| ! | TGATTAATCATTTAGGGTTC+TGG | + | chr8_3:20867157-20867176 | Msa1281370:intron | 30.0% |
| !! | TATGTGTTTTCGTCTTGTTA+AGG | + | chr8_3:20867290-20867309 | Msa1281370:intron | 30.0% |
| ! | TGTTTTTCTGTTTGTTCTGT+TGG | + | chr8_3:20867686-20867705 | Msa1281370:intron | 30.0% |
| ! | GTTTTTCTGTTTGTTCTGTT+GGG | + | chr8_3:20867687-20867706 | Msa1281370:intron | 30.0% |
| ! | TTATGTAACTTGCATTGTTC+AGG | + | chr8_3:20867744-20867763 | Msa1281370:intron | 30.0% |
| !! | TTTGTTGTTGACTTTCTCAT+GGG | + | chr8_3:20867965-20867984 | Msa1281370:CDS | 30.0% |
| CAAAAGCTTAATTCGTTCAA+TGG | - | chr8_3:20868029-20868048 | None:intergenic | 30.0% | |
| !! | TATGAAGTGTTGTCAAATAG+TGG | + | chr8_3:20868318-20868337 | Msa1281370:intron | 30.0% |
| CGATCTATAATTGACAACAA+TGG | + | chr8_3:20868383-20868402 | Msa1281370:intron | 30.0% | |
| CTTGTGATTCAAATTCTTCT+AGG | + | chr8_3:20868459-20868478 | Msa1281370:intron | 30.0% | |
| TTTCAATTTCAAGAAGGACA+AGG | + | chr8_3:20868519-20868538 | Msa1281370:CDS | 30.0% | |
| TTGGTCAAATAAAATGACAC+AGG | - | chr8_3:20868945-20868964 | None:intergenic | 30.0% | |
| GTTAGTCGAACTAAAGAATT+TGG | - | chr8_3:20868964-20868983 | None:intergenic | 30.0% | |
| !! | TTTTAGTTAATGGCCATGTT+TGG | - | chr8_3:20869282-20869301 | None:intergenic | 30.0% |
| !!! | GCTGGCTTTATTTTAGTTAA+TGG | - | chr8_3:20869292-20869311 | None:intergenic | 30.0% |
| AAAAAAGAATTAAGCACCAC+CGG | - | chr8_3:20869676-20869695 | None:intergenic | 30.0% | |
| !! | GAAATGAAAATGAGTGTTGG+TGG | - | chr8_3:20866241-20866260 | None:intergenic | 35.0% |
| TGTTCTTCATTTACCCACTA+AGG | + | chr8_3:20866301-20866320 | Msa1281370:five_prime_UTR | 35.0% | |
| ! | TCTTGAGTATTTTTCCAGCT+TGG | + | chr8_3:20866823-20866842 | Msa1281370:intron | 35.0% |
| AATTCAATCAGAATCCAAGC+TGG | - | chr8_3:20866840-20866859 | None:intergenic | 35.0% | |
| ! | CATGACAAGACAATTTTCTC+GGG | + | chr8_3:20866949-20866968 | Msa1281370:intron | 35.0% |
| ! | ATGACAAGACAATTTTCTCG+GGG | + | chr8_3:20866950-20866969 | Msa1281370:intron | 35.0% |
| AAATTGTGAGGGACCAAATT+CGG | + | chr8_3:20867119-20867138 | Msa1281370:intron | 35.0% | |
| AAATGGGTAAAGACCGAATT+TGG | - | chr8_3:20867135-20867154 | None:intergenic | 35.0% | |
| GAGTTAGAACTTGTGAACTA+TGG | + | chr8_3:20867239-20867258 | Msa1281370:intron | 35.0% | |
| CAATGTCAGACTCATGTTTA+TGG | - | chr8_3:20867380-20867399 | None:intergenic | 35.0% | |
| AACATGAGTCTGACATTGTT+AGG | + | chr8_3:20867382-20867401 | Msa1281370:intron | 35.0% | |
| CAATGTCAGAGTGATGTTTA+TGG | - | chr8_3:20867445-20867464 | None:intergenic | 35.0% | |
| CAATGTCAGAGTCATGTTTA+TGG | - | chr8_3:20867510-20867529 | None:intergenic | 35.0% | |
| AACATGACTCTGACATTGTT+AGG | + | chr8_3:20867512-20867531 | Msa1281370:intron | 35.0% | |
| AACAATGTCAGAGTCGTTAA+TGG | - | chr8_3:20867575-20867594 | None:intergenic | 35.0% | |
| TTAACGACTCTGACATTGTT+AGG | + | chr8_3:20867575-20867594 | Msa1281370:intron | 35.0% | |
| GCAAATATCTGAACAAGCAA+TGG | - | chr8_3:20867664-20867683 | None:intergenic | 35.0% | |
| TCATTGGATACTGAAATGCA+GGG | - | chr8_3:20867877-20867896 | None:intergenic | 35.0% | |
| ATCATTGGATACTGAAATGC+AGG | - | chr8_3:20867878-20867897 | None:intergenic | 35.0% | |
| AACAAAGTTTCCTTTCTCAG+CGG | - | chr8_3:20867951-20867970 | None:intergenic | 35.0% | |
| !! | CTTTGTTGTTGACTTTCTCA+TGG | + | chr8_3:20867964-20867983 | Msa1281370:CDS | 35.0% |
| ! | TAAGCTTTTGATCCAAAACC+AGG | + | chr8_3:20868039-20868058 | Msa1281370:CDS | 35.0% |
| ! | TAATCATCTCATCCTGGTTT+TGG | - | chr8_3:20868054-20868073 | None:intergenic | 35.0% |
| !! | TGACTGTTTTAAGCGAACAA+CGG | + | chr8_3:20868111-20868130 | Msa1281370:CDS | 35.0% |
| !! | GAAATAACGGATGACATTTG+CGG | - | chr8_3:20868173-20868192 | None:intergenic | 35.0% |
| TAACCTGAGTAGGGAAATAA+CGG | - | chr8_3:20868186-20868205 | None:intergenic | 35.0% | |
| ! | TGTCTCTTCACAACTCTTTT+TGG | + | chr8_3:20868416-20868435 | Msa1281370:intron | 35.0% |
| ! | GAGGCTTTTCAATTTCAAGA+AGG | + | chr8_3:20868513-20868532 | Msa1281370:CDS | 35.0% |
| AATTTCAAGAAGGACAAGGA+TGG | + | chr8_3:20868523-20868542 | Msa1281370:CDS | 35.0% | |
| AAGGGAGTAGACAAAGAAAA+GGG | - | chr8_3:20868605-20868624 | None:intergenic | 35.0% | |
| ATAAAATGACACAGGGGATA+AGG | - | chr8_3:20868868-20868887 | None:intergenic | 35.0% | |
| TGGTCGAATAAAATGACACA+GGG | - | chr8_3:20868875-20868894 | None:intergenic | 35.0% | |
| TTGGTCGAATAAAATGACAC+AGG | - | chr8_3:20868876-20868895 | None:intergenic | 35.0% | |
| GTTAGTCGAACTAAAGAACT+TGG | - | chr8_3:20868895-20868914 | None:intergenic | 35.0% | |
| ! | AAGCACTTGTGAGACTATTT+TGG | + | chr8_3:20869076-20869095 | Msa1281370:intron | 35.0% |
| !! | CTTGTTTTCACAAGCTATCA+TGG | - | chr8_3:20869157-20869176 | None:intergenic | 35.0% |
| TTCAGCTGTTTATCCAAACA+TGG | + | chr8_3:20869266-20869285 | Msa1281370:intron | 35.0% | |
| AAAATCAGAAGCAACTTTGC+TGG | - | chr8_3:20869310-20869329 | None:intergenic | 35.0% | |
| !! | ATTTCCGTTTTGATCATTGC+AGG | + | chr8_3:20869368-20869387 | Msa1281370:intron | 35.0% |
| CTATCCTGCAATGATCAAAA+CGG | - | chr8_3:20869375-20869394 | None:intergenic | 35.0% | |
| ! | GATAGTTTCTTTGCTAGCTT+TGG | + | chr8_3:20869390-20869409 | Msa1281370:CDS | 35.0% |
| TTCTCCTAACTGTGTCAATT+GGG | - | chr8_3:20869458-20869477 | None:intergenic | 35.0% | |
| ! | AGAAGAATGATGATGACATC+TGG | + | chr8_3:20869474-20869493 | Msa1281370:CDS | 35.0% |
| AAGTTACAGGTCATAATGCT+CGG | + | chr8_3:20869636-20869655 | Msa1281370:CDS | 35.0% | |
| ! | ACAAAATTTTCCGCAAGACT+TGG | - | chr8_3:20869763-20869782 | None:intergenic | 35.0% |
| !!! | AATGGTCCTATACCCTTTTT+TGG | + | chr8_3:20869799-20869818 | Msa1281370:three_prime_UTR | 35.0% |
| ! | TCTGATCCAAAAAAGGGTAT+AGG | - | chr8_3:20869808-20869827 | None:intergenic | 35.0% |
| ! | ATCTGGGACTAATTTGTCCT+CGG | + | chr8_3:20867032-20867051 | Msa1281370:intron | 40.0% |
| TCCTCGGGATAAGAATGTTA+TGG | + | chr8_3:20867048-20867067 | Msa1281370:intron | 40.0% | |
| TCCATAACATTCTTATCCCG+AGG | - | chr8_3:20867052-20867071 | None:intergenic | 40.0% | |
| TGGTCTGCAAGAAAATTGTG+AGG | + | chr8_3:20867107-20867126 | Msa1281370:intron | 40.0% | |
| GGTCTGCAAGAAAATTGTGA+GGG | + | chr8_3:20867108-20867127 | Msa1281370:intron | 40.0% | |
| AACATGACTCTGACACTGTT+AGG | + | chr8_3:20867317-20867336 | Msa1281370:intron | 40.0% | |
| ATTGTTCAGGAAAGTCACCA+TGG | + | chr8_3:20867757-20867776 | Msa1281370:intron | 40.0% | |
| CCACATTCTGAACGAGATTA+GGG | - | chr8_3:20867799-20867818 | None:intergenic | 40.0% | |
| CCTTTGGTACATAGAAAGAC+CGG | - | chr8_3:20867831-20867850 | None:intergenic | 40.0% | |
| GTCTTTCTATGTACCAAAGG+AGG | + | chr8_3:20867831-20867850 | Msa1281370:CDS | 40.0% | |
| ATGTACCAAAGGAGGTCATT+TGG | + | chr8_3:20867839-20867858 | Msa1281370:CDS | 40.0% | |
| TGTACCAAAGGAGGTCATTT+GGG | + | chr8_3:20867840-20867859 | Msa1281370:CDS | 40.0% | |
| ACAAAGTTTCCTTTCTCAGC+GGG | - | chr8_3:20867950-20867969 | None:intergenic | 40.0% | |
| ! | CAGCTTTAATCATCTCATCC+TGG | - | chr8_3:20868060-20868079 | None:intergenic | 40.0% |
| CAGGATGAGATGATTAAAGC+TGG | + | chr8_3:20868058-20868077 | Msa1281370:CDS | 40.0% | |
| TAGGGAGACAATACCTTCAT+CGG | - | chr8_3:20868137-20868156 | None:intergenic | 40.0% | |
| !! | ATGAAGGTATTGTCTCCCTA+TGG | + | chr8_3:20868137-20868156 | Msa1281370:CDS | 40.0% |
| GAACTCAACTAACCTGAGTA+GGG | - | chr8_3:20868195-20868214 | None:intergenic | 40.0% | |
| AGAACTCAACTAACCTGAGT+AGG | - | chr8_3:20868196-20868215 | None:intergenic | 40.0% | |
| !! | GAAGTGTTGTCAAATAGTGG+CGG | + | chr8_3:20868321-20868340 | Msa1281370:intron | 40.0% |
| !! | GGCTTTGAACTTTGCATTCA+AGG | + | chr8_3:20868480-20868499 | Msa1281370:intron | 40.0% |
| CATTCAAGGACTACTTCAAG+AGG | + | chr8_3:20868494-20868513 | Msa1281370:CDS | 40.0% | |
| ACAAGGATGGTTACTGGAAA+TGG | + | chr8_3:20868536-20868555 | Msa1281370:CDS | 40.0% | |
| !! | GAAATGGTTTGCTGGAAACT+TGG | + | chr8_3:20868552-20868571 | Msa1281370:CDS | 40.0% |
| CAAGGGAGTAGACAAAGAAA+AGG | - | chr8_3:20868606-20868625 | None:intergenic | 40.0% | |
| ! | CTTTGCATCATTTGCTAGAC+GGG | - | chr8_3:20868641-20868660 | None:intergenic | 40.0% |
| ! | CCTTTGCATCATTTGCTAGA+CGG | - | chr8_3:20868642-20868661 | None:intergenic | 40.0% |
| TGATGTCTACAAGAAGACAC+TGG | + | chr8_3:20868705-20868724 | Msa1281370:CDS | 40.0% | |
| AGATGTTGAAACCACGGTAA+AGG | - | chr8_3:20868750-20868769 | None:intergenic | 40.0% | |
| CACAAGAGATGTTGAAACCA+CGG | - | chr8_3:20868756-20868775 | None:intergenic | 40.0% | |
| GGTTTCAACATCTCTTGTGT+CGG | + | chr8_3:20868757-20868776 | Msa1281370:CDS | 40.0% | |
| GGTCGAATAAAATGACACAG+GGG | - | chr8_3:20868874-20868893 | None:intergenic | 40.0% | |
| !! | TTCTTTGCTAGCTTTGGTCT+TGG | + | chr8_3:20869396-20869415 | Msa1281370:CDS | 40.0% |
| CTTACCCAATTGACACAGTT+AGG | + | chr8_3:20869451-20869470 | Msa1281370:CDS | 40.0% | |
| CTTCTCCTAACTGTGTCAAT+TGG | - | chr8_3:20869459-20869478 | None:intergenic | 40.0% | |
| !! | GATTTGTTGGAATGCATCGA+AGG | - | chr8_3:20869523-20869542 | None:intergenic | 40.0% |
| CAACAAATCCTCAAGAACGA+GGG | + | chr8_3:20869534-20869553 | Msa1281370:CDS | 40.0% | |
| ! | GGTGCTAAGTCCTTGTTTAA+GGG | + | chr8_3:20869555-20869574 | Msa1281370:CDS | 40.0% |
| ATAATGCTCGGCAAGAAGTA+CGG | + | chr8_3:20869648-20869667 | Msa1281370:CDS | 40.0% | |
| TGAGAATTGACCAAGTCTTG+CGG | + | chr8_3:20869750-20869769 | Msa1281370:three_prime_UTR | 40.0% | |
| AATGCCGCAGCTAGAACTTT+GGG | - | chr8_3:20866191-20866210 | None:intergenic | 45.0% | |
| AAATGCCGCAGCTAGAACTT+TGG | - | chr8_3:20866192-20866211 | None:intergenic | 45.0% | |
| ! | TCTGGGACTAATTTGTCCTC+GGG | + | chr8_3:20867033-20867052 | Msa1281370:intron | 45.0% |
| GAAAGTCACCATGGTTGATC+AGG | + | chr8_3:20867766-20867785 | Msa1281370:exon | 45.0% | |
| CCCTAATCTCGTTCAGAATG+TGG | + | chr8_3:20867796-20867815 | Msa1281370:CDS | 45.0% | |
| GCCACATTCTGAACGAGATT+AGG | - | chr8_3:20867800-20867819 | None:intergenic | 45.0% | |
| CCGGTCTTTCTATGTACCAA+AGG | + | chr8_3:20867828-20867847 | Msa1281370:CDS | 45.0% | |
| AACTCCCAAATGACCTCCTT+TGG | - | chr8_3:20867847-20867866 | None:intergenic | 45.0% | |
| TGGATACTGAAATGCAGGGT+TGG | - | chr8_3:20867873-20867892 | None:intergenic | 45.0% | |
| !! | GTTGTTGACTTTCTCATGGG+TGG | + | chr8_3:20867968-20867987 | Msa1281370:CDS | 45.0% |
| TAGACTTTCTGAGCCCTACA+AGG | + | chr8_3:20868081-20868100 | Msa1281370:CDS | 45.0% | |
| AGACTTTCTGAGCCCTACAA+GGG | + | chr8_3:20868082-20868101 | Msa1281370:CDS | 45.0% | |
| ! | CATCCGTTATTTCCCTACTC+AGG | + | chr8_3:20868180-20868199 | Msa1281370:CDS | 45.0% |
| AGAAGGACAAGGATGGTTAC+TGG | + | chr8_3:20868530-20868549 | Msa1281370:CDS | 45.0% | |
| ! | GGTTACTGGAAATGGTTTGC+TGG | + | chr8_3:20868544-20868563 | Msa1281370:CDS | 45.0% |
| CCGTCTAGCAAATGATGCAA+AGG | + | chr8_3:20868639-20868658 | Msa1281370:CDS | 45.0% | |
| GATGCAAAGGCTGCAAAGAA+AGG | + | chr8_3:20868652-20868671 | Msa1281370:CDS | 45.0% | |
| AAGAAGACACTGGCAACTGA+TGG | + | chr8_3:20868715-20868734 | Msa1281370:CDS | 45.0% | |
| GTCGGAATCATTGTGTATCG+TGG | + | chr8_3:20868775-20868794 | Msa1281370:CDS | 45.0% | |
| GTGTATCGTGGTCTCTACTT+TGG | + | chr8_3:20868787-20868806 | Msa1281370:CDS | 45.0% | |
| ! | AGTAAGGAGAACTGGCTTCA+AGG | - | chr8_3:20868824-20868843 | None:intergenic | 45.0% |
| TTGAAGCCAGTTCTCCTTAC+TGG | + | chr8_3:20868823-20868842 | Msa1281370:CDS | 45.0% | |
| AGAGATCCAGTAAGGAGAAC+TGG | - | chr8_3:20868832-20868851 | None:intergenic | 45.0% | |
| ACAGCTGAAGTAAGCGCTTA+TGG | - | chr8_3:20869255-20869274 | None:intergenic | 45.0% | |
| !! | TTGCTAGCTTTGGTCTTGGA+TGG | + | chr8_3:20869400-20869419 | Msa1281370:CDS | 45.0% |
| CCTCGTTCTTGAGGATTTGT+TGG | - | chr8_3:20869536-20869555 | None:intergenic | 45.0% | |
| CCAACAAATCCTCAAGAACG+AGG | + | chr8_3:20869533-20869552 | Msa1281370:CDS | 45.0% | |
| ! | GGGTGCTAAGTCCTTGTTTA+AGG | + | chr8_3:20869554-20869573 | Msa1281370:CDS | 45.0% |
| ! | AAGTCCTTGTTTAAGGGAGC+TGG | + | chr8_3:20869561-20869580 | Msa1281370:CDS | 45.0% |
| ATGCCGCAGCTAGAACTTTG+GGG | - | chr8_3:20866190-20866209 | None:intergenic | 50.0% | |
| GGTACATAGAAAGACCGGTC+TGG | - | chr8_3:20867826-20867845 | None:intergenic | 50.0% | |
| GCGTTACATGCTGGCATCAT+TGG | - | chr8_3:20867893-20867912 | None:intergenic | 50.0% | |
| GTTGTTGCAGCGTTACATGC+TGG | - | chr8_3:20867902-20867921 | None:intergenic | 50.0% | |
| GGGAGCTGCAACAAAGATAG+GGG | - | chr8_3:20867930-20867949 | None:intergenic | 50.0% | |
| CGGGAGCTGCAACAAAGATA+GGG | - | chr8_3:20867931-20867950 | None:intergenic | 50.0% | |
| TCTGAGCCCTACAAGGGAAT+CGG | + | chr8_3:20868088-20868107 | Msa1281370:CDS | 50.0% | |
| !! | CAGTCACCGATTCCCTTGTA+GGG | - | chr8_3:20868097-20868116 | None:intergenic | 50.0% |
| !! | ACAGTCACCGATTCCCTTGT+AGG | - | chr8_3:20868098-20868117 | None:intergenic | 50.0% |
| GGTATTGTCTCCCTATGGAG+AGG | + | chr8_3:20868142-20868161 | Msa1281370:CDS | 50.0% | |
| !! | TGCGGTGTTACCTCTCCATA+GGG | - | chr8_3:20868155-20868174 | None:intergenic | 50.0% |
| !! | TTGCGGTGTTACCTCTCCAT+AGG | - | chr8_3:20868156-20868175 | None:intergenic | 50.0% |
| TTGTCAAATAGTGGCGGCAC+TGG | + | chr8_3:20868327-20868346 | Msa1281370:intron | 50.0% | |
| TGTCAAATAGTGGCGGCACT+GGG | + | chr8_3:20868328-20868347 | Msa1281370:intron | 50.0% | |
| TTTGCTGGAAACTTGGCCTC+AGG | + | chr8_3:20868559-20868578 | Msa1281370:CDS | 50.0% | |
| ACGGGTACGAGCATAGTCAA+GGG | - | chr8_3:20868623-20868642 | None:intergenic | 50.0% | |
| ! | AAGGCTGCAAAGAAAGGTGC+AGG | + | chr8_3:20868658-20868677 | Msa1281370:CDS | 50.0% |
| GCAGGAGGAAGACAATTCGA+TGG | + | chr8_3:20868676-20868695 | Msa1281370:CDS | 50.0% | |
| CTGGCAACTGATGGTATTGC+TGG | + | chr8_3:20868724-20868743 | Msa1281370:CDS | 50.0% | |
| TCTCCTTACTGGATCTCTGC+AGG | + | chr8_3:20868834-20868853 | Msa1281370:CDS | 50.0% | |
| GAACCTGCAGAGATCCAGTA+AGG | - | chr8_3:20868840-20868859 | None:intergenic | 50.0% | |
| CTTGGATGGCTCATCACCAA+TGG | + | chr8_3:20869414-20869433 | Msa1281370:CDS | 50.0% | |
| ACTTAGCACCCTCGTTCTTG+AGG | - | chr8_3:20869545-20869564 | None:intergenic | 50.0% | |
| AGCACCAGCTCCCTTAAACA+AGG | - | chr8_3:20869568-20869587 | None:intergenic | 50.0% | |
| ! | CGCTGGTTACGACAAGTTAC+AGG | + | chr8_3:20869623-20869642 | Msa1281370:CDS | 50.0% |
| ! | AGCCCCCAAAGTTCTAGCTG+CGG | + | chr8_3:20866184-20866203 | Msa1281370:five_prime_UTR | 55.0% |
| TGCCGCAGCTAGAACTTTGG+GGG | - | chr8_3:20866189-20866208 | None:intergenic | 55.0% | |
| !! | GCGCGAGTTTGTTGGAGACT+TGG | - | chr8_3:20866216-20866235 | None:intergenic | 55.0% |
| GCGCTGAACCTGATCAACCA+TGG | - | chr8_3:20867777-20867796 | None:intergenic | 55.0% | |
| GCGGGAGCTGCAACAAAGAT+AGG | - | chr8_3:20867932-20867951 | None:intergenic | 55.0% | |
| TCGTTCAATGGGAGCTGCAG+CGG | - | chr8_3:20868017-20868036 | None:intergenic | 55.0% | |
| AAGCGAACAACGGCCGATGA+AGG | + | chr8_3:20868121-20868140 | Msa1281370:CDS | 55.0% | |
| GACGGGTACGAGCATAGTCA+AGG | - | chr8_3:20868624-20868643 | None:intergenic | 55.0% | |
| ! | GCTGCAAAGAAAGGTGCAGG+AGG | + | chr8_3:20868661-20868680 | Msa1281370:CDS | 55.0% |
| !! | GGTATTGCTGGCCTTTACCG+TGG | + | chr8_3:20868736-20868755 | Msa1281370:CDS | 55.0% |
| TGGCTCATCACCAATGGTGC+AGG | + | chr8_3:20869420-20869439 | Msa1281370:CDS | 55.0% | |
| GGCTCATCACCAATGGTGCA+GGG | + | chr8_3:20869421-20869440 | Msa1281370:CDS | 55.0% | |
| AGATGCTAGCCCTGCACCAT+TGG | - | chr8_3:20869433-20869452 | None:intergenic | 55.0% | |
| ! | CTCGGCAAGAAGTACGGATC+CGG | + | chr8_3:20869654-20869673 | Msa1281370:CDS | 55.0% |
| TGGTGGCTGCGCGAGTTTGT+TGG | - | chr8_3:20866224-20866243 | None:intergenic | 60.0% | |
| CAGAATGTGGCACGCCAGAC+CGG | + | chr8_3:20867809-20867828 | Msa1281370:CDS | 60.0% | |
| GTTGCAGCTCCCGCTGAGAA+AGG | + | chr8_3:20867938-20867957 | Msa1281370:CDS | 60.0% | |
| GCTGGAAACTTGGCCTCAGG+AGG | + | chr8_3:20868562-20868581 | Msa1281370:CDS | 60.0% | |
| ! | GGCAAGAAGTACGGATCCGG+TGG | + | chr8_3:20869657-20869676 | Msa1281370:CDS | 60.0% |
| !! | TTGGCCTCAGGAGGTGCTGC+TGG | + | chr8_3:20868571-20868590 | Msa1281370:CDS | 65.0% |
| AGCACCAGCAGCACCTCCTG+AGG | - | chr8_3:20868578-20868597 | None:intergenic | 65.0% | |
| AACATCCTCCGTGCCGTCGC+TGG | + | chr8_3:20869588-20869607 | Msa1281370:CDS | 65.0% | |
| GAGCACACCAGCACCAGCGA+CGG | - | chr8_3:20869604-20869623 | None:intergenic | 65.0% | |
| CACCAGCACCAGCGACGGCA+CGG | - | chr8_3:20869599-20869618 | None:intergenic | 70.0% | |
| !! | GCTGGTGCTGGTGTGCTCGC+TGG | + | chr8_3:20869606-20869625 | Msa1281370:CDS | 70.0% |
| CAGCACCAGCGACGGCACGG+AGG | - | chr8_3:20869596-20869615 | None:intergenic | 75.0% | |
| CTCCGTGCCGTCGCTGGTGC+TGG | + | chr8_3:20869594-20869613 | Msa1281370:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 20866177 | 20870034 | 20866177 | ID=Msa1281370;Name=Msa1281370 |
| chr8_3 | mRNA | 20866177 | 20870034 | 20866177 | ID=Msa1281370-mRNA-1;Parent=Msa1281370;Name=Msa1281370-mRNA-1;_AED=0.01;_eAED=0.01;_QI=156|1|1|1|0.66|0.75|4|348|365 |
| chr8_3 | exon | 20866177 | 20866322 | 20866177 | ID=Msa1281370-mRNA-1:exon:7591;Parent=Msa1281370-mRNA-1 |
| chr8_3 | exon | 20867766 | 20868201 | 20867766 | ID=Msa1281370-mRNA-1:exon:7592;Parent=Msa1281370-mRNA-1 |
| chr8_3 | exon | 20868481 | 20868855 | 20868481 | ID=Msa1281370-mRNA-1:exon:7593;Parent=Msa1281370-mRNA-1 |
| chr8_3 | exon | 20869390 | 20870034 | 20869390 | ID=Msa1281370-mRNA-1:exon:7594;Parent=Msa1281370-mRNA-1 |
| chr8_3 | five_prime_UTR | 20866177 | 20866322 | 20866177 | ID=Msa1281370-mRNA-1:five_prime_utr;Parent=Msa1281370-mRNA-1 |
| chr8_3 | five_prime_UTR | 20867766 | 20867775 | 20867766 | ID=Msa1281370-mRNA-1:five_prime_utr;Parent=Msa1281370-mRNA-1 |
| chr8_3 | CDS | 20867776 | 20868201 | 20867776 | ID=Msa1281370-mRNA-1:cds;Parent=Msa1281370-mRNA-1 |
| chr8_3 | CDS | 20868481 | 20868855 | 20868481 | ID=Msa1281370-mRNA-1:cds;Parent=Msa1281370-mRNA-1 |
| chr8_3 | CDS | 20869390 | 20869686 | 20869390 | ID=Msa1281370-mRNA-1:cds;Parent=Msa1281370-mRNA-1 |
| chr8_3 | three_prime_UTR | 20869687 | 20870034 | 20869687 | ID=Msa1281370-mRNA-1:three_prime_utr;Parent=Msa1281370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
