Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222150 | XP_003593767.1 | 96.372 | 441 | 15 | 1 | 1 | 441 | 1 | 440 | 0.0 | 860 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222150 | sp|Q9CAG5|PUB7_ARATH | 29.293 | 297 | 180 | 8 | 100 | 379 | 439 | 722 | 2.53e-17 | 88.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222150 | G7ILI8 | 96.372 | 441 | 15 | 1 | 1 | 441 | 1 | 440 | 0.0 | 860 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0183390 | Msa0222150 | 0.801281 | 9.694466e-49 | -8.615850e-47 |
| Msa0222150 | Msa0235210 | 0.837692 | 4.473633e-57 | -8.615850e-47 |
| Msa0222150 | Msa0273600 | 0.921671 | 2.650331e-88 | -8.615850e-47 |
| Msa0222150 | Msa0313820 | 0.918084 | 2.409133e-86 | -8.615850e-47 |
| Msa0222150 | Msa0374220 | 0.837649 | 4.589176e-57 | -8.615850e-47 |
| Msa0222150 | Msa0469890 | 0.831936 | 1.258513e-55 | -8.615850e-47 |
| Msa0222150 | Msa0878220 | 0.801002 | 1.105688e-48 | -8.615850e-47 |
| Msa0222150 | Msa0928180 | 0.803249 | 3.814208e-49 | -8.615850e-47 |
| Msa0222150 | Msa0943970 | 0.828630 | 8.078514e-55 | -8.615850e-47 |
| Msa0222150 | Msa0944020 | 0.824918 | 6.222253e-54 | -8.615850e-47 |
| Msa0222150 | Msa0992510 | 0.818240 | 2.173657e-52 | -8.615850e-47 |
| Msa0222150 | Msa0993190 | 0.816910 | 4.333277e-52 | -8.615850e-47 |
| Msa0222150 | Msa1103260 | 0.803413 | 3.528495e-49 | -8.615850e-47 |
| Msa0222150 | Msa1184230 | 0.803799 | 2.933274e-49 | -8.615850e-47 |
| Msa0222150 | Msa1238600 | 0.814589 | 1.426418e-51 | -8.615850e-47 |
| Msa0222150 | Msa1238660 | 0.802801 | 4.722119e-49 | -8.615850e-47 |
| Msa0222150 | Msa1289050 | 0.802108 | 6.560459e-49 | -8.615850e-47 |
| Msa0222150 | Msa1289090 | 0.811098 | 8.297836e-51 | -8.615850e-47 |
| Msa0222150 | Msa1357560 | 0.834560 | 2.793564e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222150 | MtrunA17_Chr2g0283691 | 96.372 | 441 | 15 | 1 | 1 | 441 | 1 | 440 | 0.0 | 860 |
| Msa0222150 | MtrunA17_Chr3g0137061 | 33.159 | 383 | 226 | 6 | 65 | 419 | 90 | 470 | 4.58e-44 | 160 |
| Msa0222150 | MtrunA17_Chr1g0149941 | 34.294 | 347 | 193 | 8 | 105 | 419 | 192 | 535 | 6.96e-39 | 147 |
| Msa0222150 | MtrunA17_Chr8g0377151 | 26.984 | 315 | 219 | 4 | 61 | 367 | 402 | 713 | 6.49e-20 | 92.8 |
| Msa0222150 | MtrunA17_Chr3g0122721 | 28.571 | 371 | 241 | 12 | 55 | 414 | 398 | 755 | 6.04e-19 | 89.7 |
| Msa0222150 | MtrunA17_Chr1g0183781 | 28.269 | 283 | 198 | 5 | 87 | 368 | 440 | 718 | 7.04e-18 | 86.3 |
| Msa0222150 | MtrunA17_Chr1g0152561 | 25.342 | 292 | 212 | 5 | 81 | 370 | 55 | 342 | 2.44e-13 | 70.9 |
| Msa0222150 | MtrunA17_Chr7g0261371 | 25.524 | 286 | 208 | 4 | 87 | 371 | 514 | 795 | 7.94e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222150 | AT2G27430.1 | 56.948 | 439 | 169 | 7 | 10 | 441 | 13 | 438 | 3.76e-155 | 447 |
| Msa0222150 | AT4G31890.3 | 36.127 | 346 | 191 | 11 | 97 | 419 | 155 | 493 | 2.59e-42 | 157 |
| Msa0222150 | AT4G31890.2 | 36.127 | 346 | 191 | 11 | 97 | 419 | 155 | 493 | 2.59e-42 | 157 |
| Msa0222150 | AT4G31890.1 | 36.127 | 346 | 191 | 11 | 97 | 419 | 155 | 493 | 2.59e-42 | 157 |
| Msa0222150 | AT2G25130.1 | 35.276 | 326 | 190 | 7 | 108 | 419 | 132 | 450 | 6.86e-42 | 154 |
| Msa0222150 | AT1G67530.2 | 29.293 | 297 | 180 | 8 | 100 | 379 | 439 | 722 | 2.57e-18 | 88.2 |
| Msa0222150 | AT1G67530.1 | 29.293 | 297 | 180 | 8 | 100 | 379 | 439 | 722 | 2.57e-18 | 88.2 |
| Msa0222150 | AT1G67530.4 | 29.293 | 297 | 180 | 8 | 100 | 379 | 439 | 722 | 2.57e-18 | 88.2 |
| Msa0222150 | AT2G23140.3 | 25.364 | 343 | 248 | 7 | 30 | 371 | 300 | 635 | 1.80e-16 | 82.4 |
| Msa0222150 | AT2G23140.5 | 25.364 | 343 | 248 | 7 | 30 | 371 | 300 | 635 | 1.80e-16 | 82.4 |
| Msa0222150 | AT2G23140.2 | 25.364 | 343 | 248 | 7 | 30 | 371 | 489 | 824 | 2.81e-16 | 82.0 |
| Msa0222150 | AT2G23140.4 | 25.364 | 343 | 248 | 7 | 30 | 371 | 489 | 824 | 2.81e-16 | 82.0 |
| Msa0222150 | AT2G23140.1 | 25.364 | 343 | 248 | 7 | 30 | 371 | 492 | 827 | 3.05e-16 | 81.6 |
| Msa0222150 | AT3G54790.2 | 28.873 | 284 | 196 | 6 | 89 | 370 | 440 | 719 | 4.38e-14 | 75.1 |
| Msa0222150 | AT1G27910.1 | 27.445 | 317 | 215 | 6 | 73 | 377 | 404 | 717 | 5.30e-14 | 74.7 |
| Msa0222150 | AT3G54790.3 | 28.873 | 284 | 196 | 6 | 89 | 370 | 476 | 755 | 5.41e-14 | 74.7 |
| Msa0222150 | AT3G54790.1 | 28.873 | 284 | 196 | 6 | 89 | 370 | 476 | 755 | 5.41e-14 | 74.7 |
| Msa0222150 | AT1G24330.1 | 25.773 | 291 | 189 | 5 | 112 | 387 | 451 | 729 | 3.25e-13 | 72.4 |
| Msa0222150 | AT1G24330.2 | 25.773 | 291 | 189 | 5 | 112 | 387 | 451 | 729 | 3.25e-13 | 72.4 |
Find 109 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCATCATCTTCTTCTATT+TGG | 0.105767 | 2_1:+71158757 | Msa0222150:CDS |
| GAAACTATTGCAATGGTTTA+AGG | 0.113364 | 2_1:+71162364 | Msa0222150:CDS |
| GTCAATTGTCTTAGGTAATT+TGG | 0.115729 | 2_1:-71161811 | None:intergenic |
| TGAATATAAACGGTTGAATT+TGG | 0.154165 | 2_1:+71162810 | Msa0222150:three_prime_UTR |
| ACCGACAACTCTTGACATTT+TGG | 0.155414 | 2_1:-71162215 | None:intergenic |
| TTTGTATCTCTTTGATTTAA+AGG | 0.178789 | 2_1:-71162452 | None:intergenic |
| ACAAAGCTTGCATAAGAATT+TGG | 0.181591 | 2_1:+71162508 | Msa0222150:CDS |
| TAACTTGTTGGTCACGTTAA+TGG | 0.225258 | 2_1:+71162121 | Msa0222150:CDS |
| TTCATCATCTTCTTCTATTT+GGG | 0.225551 | 2_1:+71158758 | Msa0222150:CDS |
| CGGAGGATTCACAGCGCTTT+CGG | 0.245617 | 2_1:-71158845 | None:intergenic |
| TGTAGGTGCTACACCAATTC+AGG | 0.255830 | 2_1:+71162851 | Msa0222150:three_prime_UTR |
| GGAGGATTCACAGCGCTTTC+GGG | 0.279689 | 2_1:-71158844 | None:intergenic |
| TTCATCACAAAGAGATAAAA+TGG | 0.283330 | 2_1:+71162268 | Msa0222150:CDS |
| GCAAGCCCTTTAGTTTCTTA+TGG | 0.289989 | 2_1:+71162029 | Msa0222150:CDS |
| TTCTGAAATTTCTTTGACTA+AGG | 0.295883 | 2_1:-71162078 | None:intergenic |
| CAAAGTTATAGCGTCGATTT+CGG | 0.304348 | 2_1:+71162738 | Msa0222150:three_prime_UTR |
| ACGGTGGACTGTTGCCATTT+TGG | 0.315369 | 2_1:+71162690 | Msa0222150:three_prime_UTR |
| AAGGAAAGTTCTAAGAGAAT+TGG | 0.315481 | 2_1:-71162059 | None:intergenic |
| GGCTCCTAAACATGATCTTT+TGG | 0.319278 | 2_1:-71161976 | None:intergenic |
| GGAGGAGGAGAGGGAGGAGG+TGG | 0.327726 | 2_1:+71158965 | Msa0222150:CDS |
| CTTTAAATCAACAAATTTGT+AGG | 0.340571 | 2_1:+71162834 | Msa0222150:three_prime_UTR |
| ATTCCAAATCTTGGTGTTTG+TGG | 0.341246 | 2_1:-71162422 | None:intergenic |
| TGTGCCGGTGTTGGTATCTA+TGG | 0.344407 | 2_1:+71159130 | Msa0222150:CDS |
| AATAACCAATGACTTGAGTT+TGG | 0.347977 | 2_1:-71162570 | None:intergenic |
| AACTTGTTGGTCACGTTAAT+GGG | 0.351557 | 2_1:+71162122 | Msa0222150:CDS |
| TCTACAAGGTCAATTGTCTT+AGG | 0.352811 | 2_1:-71161819 | None:intergenic |
| GGTCCACAAACACCAAGATT+TGG | 0.367878 | 2_1:+71162419 | Msa0222150:CDS |
| GATACCAAAAGATCATGTTT+AGG | 0.369581 | 2_1:+71161972 | Msa0222150:CDS |
| ACAGCGCTTTCGGGTTGCTT+TGG | 0.370779 | 2_1:-71158835 | None:intergenic |
| TAACTCTGCAAACTCACTTA+TGG | 0.378473 | 2_1:-71161850 | None:intergenic |
| TTAAGAATGTCTTTAAGAAA+TGG | 0.384957 | 2_1:-71161933 | None:intergenic |
| CAACTTCGAAGTCTTCAATA+AGG | 0.402498 | 2_1:-71162614 | None:intergenic |
| GTAAAGATGGGACCACATTC+TGG | 0.405463 | 2_1:+71162398 | Msa0222150:CDS |
| AGAAAATCTAATGAAGGAAA+AGG | 0.408091 | 2_1:-71161909 | None:intergenic |
| ACTCAAAGGGCAAATGCAAA+TGG | 0.411229 | 2_1:+71162539 | Msa0222150:CDS |
| CGAAATCGACGCTATAACTT+TGG | 0.417512 | 2_1:-71162737 | None:intergenic |
| AGATGCTTCACTTTGGAAGC+TGG | 0.420867 | 2_1:+71159021 | Msa0222150:CDS |
| GGTATCTATGGTGGCTTCCC+AGG | 0.423850 | 2_1:+71159142 | Msa0222150:CDS |
| TGCTACTTTAGGTAACTTGT+TGG | 0.425049 | 2_1:+71162109 | Msa0222150:CDS |
| GAAGCATAAGGAGGAGGAGA+GGG | 0.427827 | 2_1:+71158956 | Msa0222150:CDS |
| CTCAAAGGGCAAATGCAAAT+GGG | 0.429397 | 2_1:+71162540 | Msa0222150:CDS |
| CCATGAGTTCGACATGATTA+CGG | 0.431320 | 2_1:+71162671 | Msa0222150:three_prime_UTR |
| CTCTTCGATGACTAACCACC+TGG | 0.433350 | 2_1:-71159160 | None:intergenic |
| AGGAAAGTTCTAAGAGAATT+GGG | 0.434479 | 2_1:-71162058 | None:intergenic |
| GCATAAGGAGGAGGAGAGGG+AGG | 0.434717 | 2_1:+71158959 | Msa0222150:CDS |
| TAAGGAGGAGGAGAGGGAGG+AGG | 0.439148 | 2_1:+71158962 | Msa0222150:CDS |
| CATGAATATCTGAATATAAA+CGG | 0.450941 | 2_1:+71162800 | Msa0222150:three_prime_UTR |
| TATGGAGAAGCATAAGGAGG+AGG | 0.454646 | 2_1:+71158950 | Msa0222150:CDS |
| GATGCTTCACTTTGGAAGCT+GGG | 0.458178 | 2_1:+71159022 | Msa0222150:CDS |
| ACCAAAATGTCAAGAGTTGT+CGG | 0.458853 | 2_1:+71162214 | Msa0222150:CDS |
| GGTGACCCCATTCCAAATCT+TGG | 0.459651 | 2_1:-71162431 | None:intergenic |
| AAAACAACTTCAAGAAGTAT+AGG | 0.466913 | 2_1:-71162308 | None:intergenic |
| GTCCTCCAAACTCAAGTCAT+TGG | 0.475448 | 2_1:+71162565 | Msa0222150:CDS |
| GAAAATCTAATGAAGGAAAA+GGG | 0.479557 | 2_1:-71161908 | None:intergenic |
| GATTGAAACAGTGCAAGTTA+TGG | 0.479849 | 2_1:+71158932 | Msa0222150:CDS |
| TCTTCAATAAGGCAAGCTCT+TGG | 0.481042 | 2_1:-71162603 | None:intergenic |
| GTGGTTAGTCATCGAAGAGC+AGG | 0.481239 | 2_1:+71159164 | Msa0222150:CDS |
| AATCAAAGAGATACAAATGA+AGG | 0.481857 | 2_1:+71162458 | Msa0222150:CDS |
| GAAAGTTGATAACAGAACTT+GGG | 0.485027 | 2_1:+71159105 | Msa0222150:CDS |
| TTTGGAAATAATAACTCAAA+GGG | 0.489930 | 2_1:+71162526 | Msa0222150:CDS |
| CATTGTTGAAAGGTTGTACA+AGG | 0.492312 | 2_1:-71161997 | None:intergenic |
| GGATGAAAGACAAGTAAAGA+TGG | 0.494341 | 2_1:+71162385 | Msa0222150:CDS |
| AGAAAGTTGATAACAGAACT+TGG | 0.496648 | 2_1:+71159104 | Msa0222150:CDS |
| CAAGACCATAAGAAACTAAA+GGG | 0.497099 | 2_1:-71162034 | None:intergenic |
| TTTGCAGCCACACAGAGAAT+CGG | 0.497423 | 2_1:-71162770 | None:intergenic |
| CAGGAACAAGGCTATGATAG+TGG | 0.505796 | 2_1:+71161773 | Msa0222150:intron |
| AACCAATGACTTGAGTTTGG+AGG | 0.512382 | 2_1:-71162567 | None:intergenic |
| CAAACACCAAGATTTGGAAT+GGG | 0.513089 | 2_1:+71162425 | Msa0222150:CDS |
| CTTTGGAAGCTGGGAAGAGA+AGG | 0.513641 | 2_1:+71159031 | Msa0222150:CDS |
| GCAAGTTATGGAGAAGCATA+AGG | 0.517239 | 2_1:+71158944 | Msa0222150:CDS |
| GAGATAAAATGGCACAAGCT+AGG | 0.518471 | 2_1:+71162279 | Msa0222150:CDS |
| AATTCTTTACTCGTATCAAA+CGG | 0.519898 | 2_1:+71158802 | Msa0222150:CDS |
| AATGGAAGAAAATCTAATGA+AGG | 0.520831 | 2_1:-71161915 | None:intergenic |
| ACAGTGAAGATGCTTCACTT+TGG | 0.523676 | 2_1:+71159014 | Msa0222150:CDS |
| ACAAGACCATAAGAAACTAA+AGG | 0.539120 | 2_1:-71162035 | None:intergenic |
| ACAAACACCAAGATTTGGAA+TGG | 0.539160 | 2_1:+71162424 | Msa0222150:CDS |
| AACAGAACTTGGGGTTGTGC+CGG | 0.544571 | 2_1:+71159115 | Msa0222150:CDS |
| GAGCAATGAAACTATTGCAA+TGG | 0.549239 | 2_1:+71162357 | Msa0222150:CDS |
| CAAATAGAAGAAGATGATGA+AGG | 0.552922 | 2_1:-71158756 | None:intergenic |
| AGAAGCATAAGGAGGAGGAG+AGG | 0.553180 | 2_1:+71158955 | Msa0222150:CDS |
| ACGTTGATTTACCTAGCTGA+TGG | 0.553971 | 2_1:+71159194 | Msa0222150:CDS |
| GTATTCTTTCTTCAGGAACA+AGG | 0.556956 | 2_1:+71161761 | Msa0222150:intron |
| ACTTGGGGTTGTGCCGGTGT+TGG | 0.560426 | 2_1:+71159121 | Msa0222150:CDS |
| CCGTAATCATGTCGAACTCA+TGG | 0.560647 | 2_1:-71162671 | None:intergenic |
| GATGAAAGACAAGTAAAGAT+GGG | 0.560923 | 2_1:+71162386 | Msa0222150:CDS |
| TTCTTTGTTTAAATAATCGG+AGG | 0.562901 | 2_1:-71158862 | None:intergenic |
| ATTTGGAAATAATAACTCAA+AGG | 0.567717 | 2_1:+71162525 | Msa0222150:CDS |
| TGATGAAGGAGTTGACATGT+TGG | 0.574552 | 2_1:-71158742 | None:intergenic |
| AGCAATAGAGAACAACTCAA+TGG | 0.577734 | 2_1:+71162151 | Msa0222150:CDS |
| TGGAAGCTGGGAAGAGAAGG+AGG | 0.583399 | 2_1:+71159034 | Msa0222150:CDS |
| GGTGTTTGTGGACCAGAATG+TGG | 0.586193 | 2_1:-71162410 | None:intergenic |
| AAGGCTATGATAGTGGAGGC+AGG | 0.586256 | 2_1:+71161780 | Msa0222150:CDS |
| ATCAAAGAGATACAAATGAA+GGG | 0.587935 | 2_1:+71162459 | Msa0222150:CDS |
| ATGGTCAATTCAAACATACA+TGG | 0.591645 | 2_1:-71162652 | None:intergenic |
| ATCTATGGTGGCTTCCCAGG+TGG | 0.600429 | 2_1:+71159145 | Msa0222150:CDS |
| AAGCAGAGCTGAACAGAACA+AGG | 0.613079 | 2_1:+71158887 | Msa0222150:CDS |
| ATCTCAGCCGATTCTCTGTG+TGG | 0.614183 | 2_1:+71162763 | Msa0222150:three_prime_UTR |
| TCAAAGGGCAAATGCAAATG+GGG | 0.635611 | 2_1:+71162541 | Msa0222150:CDS |
| TTATGGTTGACTCATCTACA+AGG | 0.635954 | 2_1:-71161833 | None:intergenic |
| ACGTGTAAGTTCCATCAGCT+AGG | 0.637555 | 2_1:-71159205 | None:intergenic |
| GCCGGTGTTGGTATCTATGG+TGG | 0.644634 | 2_1:+71159133 | Msa0222150:CDS |
| TGGTTAGTCATCGAAGAGCA+GGG | 0.645413 | 2_1:+71159165 | Msa0222150:CDS |
| AAAGTTGATAACAGAACTTG+GGG | 0.647620 | 2_1:+71159106 | Msa0222150:CDS |
| AAACACCAAGATTTGGAATG+GGG | 0.656392 | 2_1:+71162426 | Msa0222150:CDS |
| GAACAAGGCTATGATAGTGG+AGG | 0.667903 | 2_1:+71161776 | Msa0222150:CDS |
| AGTTATGGAGAAGCATAAGG+AGG | 0.680310 | 2_1:+71158947 | Msa0222150:CDS |
| GCCACCATAGATACCAACAC+CGG | 0.692048 | 2_1:-71159134 | None:intergenic |
| TGAGTTCGACATGATTACGG+TGG | 0.717362 | 2_1:+71162674 | Msa0222150:three_prime_UTR |
| TCTTCGATGACTAACCACCT+GGG | 0.727974 | 2_1:-71159159 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCTTTGTTTAAATAAT+CGG | - | chr2_1:71158868-71158887 | None:intergenic | 10.0% |
| !! | TTGTATAAAATATAATTAAG+TGG | - | chr2_1:71160112-71160131 | None:intergenic | 10.0% |
| !!! | TTATATTTTATACAAGAAAT+TGG | + | chr2_1:71160117-71160136 | Msa0222150:intron | 10.0% |
| !! | AATAAAATTAACATTTCAAA+TGG | + | chr2_1:71160356-71160375 | Msa0222150:intron | 10.0% |
| !! | TTAATGCAATTTAATTAATT+TGG | - | chr2_1:71160464-71160483 | None:intergenic | 10.0% |
| !! | AAATAAGAATAAGAAATAAA+AGG | - | chr2_1:71160846-71160865 | None:intergenic | 10.0% |
| !! | TTATGAAAATAATTAAAATC+CGG | + | chr2_1:71161197-71161216 | Msa0222150:intron | 10.0% |
| !!! | CTAAAAAACATTGTAATTTT+AGG | - | chr2_1:71159406-71159425 | None:intergenic | 15.0% |
| !! | ATGTTATTCCAAAATTATTA+CGG | + | chr2_1:71160044-71160063 | Msa0222150:intron | 15.0% |
| !! | ACATTAAATAAAAAACAGTT+TGG | - | chr2_1:71160280-71160299 | None:intergenic | 15.0% |
| !!! | ATTTTTCAATGAAATAATTG+AGG | + | chr2_1:71161169-71161188 | Msa0222150:intron | 15.0% |
| !! | TATGAAAATAATTAAAATCC+GGG | + | chr2_1:71161198-71161217 | Msa0222150:intron | 15.0% |
| !! | GAAAAAAAAAATTAATGTGT+TGG | - | chr2_1:71161577-71161596 | None:intergenic | 15.0% |
| !! | TTTAAAGAGTCTAAATTGTT+GGG | + | chr2_1:71159611-71159630 | Msa0222150:intron | 20.0% |
| !! | CATAGTAGATGTTTATTTAA+TGG | + | chr2_1:71159661-71159680 | Msa0222150:intron | 20.0% |
| !!! | GATATAAACCGTAATAATTT+TGG | - | chr2_1:71160055-71160074 | None:intergenic | 20.0% |
| !! | CAAGATTTATTAATACAAAG+TGG | + | chr2_1:71160209-71160228 | Msa0222150:intron | 20.0% |
| !! | TATTAATACAAAGTGGTTAT+TGG | + | chr2_1:71160216-71160235 | Msa0222150:intron | 20.0% |
| !! | AAAATTAACATTTCAAATGG+AGG | + | chr2_1:71160359-71160378 | Msa0222150:intron | 20.0% |
| !!! | TTAATTTGATGCCAAAATAT+TGG | - | chr2_1:71160515-71160534 | None:intergenic | 20.0% |
| !! | ATATTAAATCACCAAAATGA+TGG | + | chr2_1:71160605-71160624 | Msa0222150:intron | 20.0% |
| !! | TATTAAATCACCAAAATGAT+GGG | + | chr2_1:71160606-71160625 | Msa0222150:intron | 20.0% |
| !! | TAAGAATAAGAAATAAAAGG+TGG | - | chr2_1:71160843-71160862 | None:intergenic | 20.0% |
| !! | TAAATGGTAAAATACAGTAT+AGG | + | chr2_1:71161484-71161503 | Msa0222150:intron | 20.0% |
| !!! | TTAAGAATGTCTTTAAGAAA+TGG | - | chr2_1:71161936-71161955 | None:intergenic | 20.0% |
| !!! | AAAATCTCAACAAAATTTTG+TGG | - | chr2_1:71162179-71162198 | None:intergenic | 20.0% |
| !!! | TTTGTATCTCTTTGATTTAA+AGG | - | chr2_1:71162455-71162474 | None:intergenic | 20.0% |
| !! | ATTTGGAAATAATAACTCAA+AGG | + | chr2_1:71162525-71162544 | Msa0222150:CDS | 20.0% |
| !! | TTTGGAAATAATAACTCAAA+GGG | + | chr2_1:71162526-71162545 | Msa0222150:CDS | 20.0% |
| !! | CATGAATATCTGAATATAAA+CGG | + | chr2_1:71162800-71162819 | Msa0222150:three_prime_UTR | 20.0% |
| !! | CTTTAAATCAACAAATTTGT+AGG | + | chr2_1:71162834-71162853 | Msa0222150:three_prime_UTR | 20.0% |
| !!! | AATACTTTAAAAACCTGAAT+TGG | - | chr2_1:71162867-71162886 | None:intergenic | 20.0% |
| ! | TTCATCATCTTCTTCTATTT+GGG | + | chr2_1:71158758-71158777 | Msa0222150:CDS | 25.0% |
| ! | AATTCTTTACTCGTATCAAA+CGG | + | chr2_1:71158802-71158821 | Msa0222150:CDS | 25.0% |
| !! | TTCTTTGTTTAAATAATCGG+AGG | - | chr2_1:71158865-71158884 | None:intergenic | 25.0% |
| ! | TAGAGACATTTCATATATTG+TGG | - | chr2_1:71159308-71159327 | None:intergenic | 25.0% |
| ! | ATGTGTTCTTAAGATGTTAT+TGG | + | chr2_1:71159567-71159586 | Msa0222150:intron | 25.0% |
| ! | TGGTTAAAATGTTGAATTGA+TGG | + | chr2_1:71159587-71159606 | Msa0222150:intron | 25.0% |
| ! | GGTTAAAATGTTGAATTGAT+GGG | + | chr2_1:71159588-71159607 | Msa0222150:intron | 25.0% |
| ! | GTTTAAAGAGTCTAAATTGT+TGG | + | chr2_1:71159610-71159629 | Msa0222150:intron | 25.0% |
| ! | TCTACTATGAATATGAACAT+AGG | - | chr2_1:71159650-71159669 | None:intergenic | 25.0% |
| ! | AATAAAAAACAGTTTGGTTG+TGG | - | chr2_1:71160274-71160293 | None:intergenic | 25.0% |
| ! | GAATTTGAAGAATTACACTT+TGG | - | chr2_1:71160318-71160337 | None:intergenic | 25.0% |
| !! | ATGGAATTTAGCCAATATTT+TGG | + | chr2_1:71160501-71160520 | Msa0222150:intron | 25.0% |
| ! | TTTCTATGTGAAGTGTATTA+TGG | - | chr2_1:71160563-71160582 | None:intergenic | 25.0% |
| ! | TGTTGAATGAAAAAAACCAT+TGG | - | chr2_1:71160810-71160829 | None:intergenic | 25.0% |
| ! | AATAAGAAATAAAAGGTGGT+GGG | - | chr2_1:71160839-71160858 | None:intergenic | 25.0% |
| ! | GATAAAGATAGTGAAAAACT+TGG | + | chr2_1:71161050-71161069 | Msa0222150:intron | 25.0% |
| ! | TTCTTCTATAAATAGAGACT+TGG | - | chr2_1:71161105-71161124 | None:intergenic | 25.0% |
| ! | ATTAAACAGACCATTGTAAA+TGG | + | chr2_1:71161468-71161487 | Msa0222150:intron | 25.0% |
| !! | CTGTATTTTACCATTTACAA+TGG | - | chr2_1:71161481-71161500 | None:intergenic | 25.0% |
| ! | GAAAATCTAATGAAGGAAAA+GGG | - | chr2_1:71161911-71161930 | None:intergenic | 25.0% |
| ! | AGAAAATCTAATGAAGGAAA+AGG | - | chr2_1:71161912-71161931 | None:intergenic | 25.0% |
| ! | AATGGAAGAAAATCTAATGA+AGG | - | chr2_1:71161918-71161937 | None:intergenic | 25.0% |
| !! | CATTTTCTAACATTGTTGAA+AGG | - | chr2_1:71162010-71162029 | None:intergenic | 25.0% |
| !!! | TTCTGAAATTTCTTTGACTA+AGG | - | chr2_1:71162081-71162100 | None:intergenic | 25.0% |
| !! | ATTTTGTTGAGATTTTGTCA+TGG | + | chr2_1:71162183-71162202 | Msa0222150:CDS | 25.0% |
| !! | TTTTGTTGAGATTTTGTCAT+GGG | + | chr2_1:71162184-71162203 | Msa0222150:CDS | 25.0% |
| ! | TTCATCACAAAGAGATAAAA+TGG | + | chr2_1:71162268-71162287 | Msa0222150:CDS | 25.0% |
| !! | AAAACAACTTCAAGAAGTAT+AGG | - | chr2_1:71162311-71162330 | None:intergenic | 25.0% |
| !!! | ACTTCTTGAAGTTGTTTTAT+TGG | + | chr2_1:71162313-71162332 | Msa0222150:CDS | 25.0% |
| !!! | CTTCTTGAAGTTGTTTTATT+GGG | + | chr2_1:71162314-71162333 | Msa0222150:CDS | 25.0% |
| !!! | TTCTTGAAGTTGTTTTATTG+GGG | + | chr2_1:71162315-71162334 | Msa0222150:CDS | 25.0% |
| ! | AATCAAAGAGATACAAATGA+AGG | + | chr2_1:71162458-71162477 | Msa0222150:CDS | 25.0% |
| ! | ATCAAAGAGATACAAATGAA+GGG | + | chr2_1:71162459-71162478 | Msa0222150:CDS | 25.0% |
| ! | GAAAAAATTGATGAAGAGTT+TGG | + | chr2_1:71162481-71162500 | Msa0222150:CDS | 25.0% |
| ! | TGAATATAAACGGTTGAATT+TGG | + | chr2_1:71162810-71162829 | Msa0222150:three_prime_UTR | 25.0% |
| CAAATAGAAGAAGATGATGA+AGG | - | chr2_1:71158759-71158778 | None:intergenic | 30.0% | |
| CTTCATCATCTTCTTCTATT+TGG | + | chr2_1:71158757-71158776 | Msa0222150:CDS | 30.0% | |
| ! | CTGTTTCAATCTTTTCAACA+TGG | - | chr2_1:71158923-71158942 | None:intergenic | 30.0% |
| !! | AGAAAGTTGATAACAGAACT+TGG | + | chr2_1:71159104-71159123 | Msa0222150:CDS | 30.0% |
| !! | GAAAGTTGATAACAGAACTT+GGG | + | chr2_1:71159105-71159124 | Msa0222150:CDS | 30.0% |
| !! | AAAGTTGATAACAGAACTTG+GGG | + | chr2_1:71159106-71159125 | Msa0222150:CDS | 30.0% |
| !!! | TAACCACTGATTTTGACTTT+CGG | + | chr2_1:71160175-71160194 | Msa0222150:intron | 30.0% |
| ! | ATACAAAGTGGTTATTGGTT+TGG | + | chr2_1:71160221-71160240 | Msa0222150:intron | 30.0% |
| AATGACATCAAATCTGATGA+TGG | + | chr2_1:71160482-71160501 | Msa0222150:intron | 30.0% | |
| ACTTCACATAGAAATTGAGT+TGG | + | chr2_1:71160569-71160588 | Msa0222150:intron | 30.0% | |
| ATGTGTTGAACCATTGTAAA+TGG | - | chr2_1:71160697-71160716 | None:intergenic | 30.0% | |
| AATGAAAAAAACCATTGGAG+AGG | - | chr2_1:71160805-71160824 | None:intergenic | 30.0% | |
| ATAAGAAATAAAAGGTGGTG+GGG | - | chr2_1:71160838-71160857 | None:intergenic | 30.0% | |
| GAATAAGAAATAAAAGGTGG+TGG | - | chr2_1:71160840-71160859 | None:intergenic | 30.0% | |
| !! | CAAGGCATTTTCATATTGAA+AGG | + | chr2_1:71161442-71161461 | Msa0222150:intron | 30.0% |
| TGGTAAAATACAGTATAGGT+AGG | + | chr2_1:71161488-71161507 | Msa0222150:intron | 30.0% | |
| ! | GTATTAACTTGGTCAAAGTT+TGG | - | chr2_1:71161713-71161732 | None:intergenic | 30.0% |
| ! | AAGGAAAGCATGTATTAACT+TGG | - | chr2_1:71161724-71161743 | None:intergenic | 30.0% |
| GTCAATTGTCTTAGGTAATT+TGG | - | chr2_1:71161814-71161833 | None:intergenic | 30.0% | |
| GATACCAAAAGATCATGTTT+AGG | + | chr2_1:71161972-71161991 | Msa0222150:CDS | 30.0% | |
| CAAGACCATAAGAAACTAAA+GGG | - | chr2_1:71162037-71162056 | None:intergenic | 30.0% | |
| ACAAGACCATAAGAAACTAA+AGG | - | chr2_1:71162038-71162057 | None:intergenic | 30.0% | |
| !! | AGGAAAGTTCTAAGAGAATT+GGG | - | chr2_1:71162061-71162080 | None:intergenic | 30.0% |
| !! | AAGGAAAGTTCTAAGAGAAT+TGG | - | chr2_1:71162062-71162081 | None:intergenic | 30.0% |
| GAAACTATTGCAATGGTTTA+AGG | + | chr2_1:71162364-71162383 | Msa0222150:CDS | 30.0% | |
| GATGAAAGACAAGTAAAGAT+GGG | + | chr2_1:71162386-71162405 | Msa0222150:CDS | 30.0% | |
| ACAAAGCTTGCATAAGAATT+TGG | + | chr2_1:71162508-71162527 | Msa0222150:CDS | 30.0% | |
| AATAACCAATGACTTGAGTT+TGG | - | chr2_1:71162573-71162592 | None:intergenic | 30.0% | |
| ATGGTCAATTCAAACATACA+TGG | - | chr2_1:71162655-71162674 | None:intergenic | 30.0% | |
| GATTGAAACAGTGCAAGTTA+TGG | + | chr2_1:71158932-71158951 | Msa0222150:CDS | 35.0% | |
| ! | CAAGAAATTGGTGATAGTTG+AGG | + | chr2_1:71160129-71160148 | Msa0222150:intron | 35.0% |
| !!! | AACCACTGATTTTGACTTTC+GGG | + | chr2_1:71160176-71160195 | Msa0222150:intron | 35.0% |
| ATAAGAAATTGCATGCTGCT+AGG | + | chr2_1:71160670-71160689 | Msa0222150:intron | 35.0% | |
| !! | TTGAAAAAGTGGGTGTTGAA+GGG | - | chr2_1:71160726-71160745 | None:intergenic | 35.0% |
| !! | ATTGAAAAAGTGGGTGTTGA+AGG | - | chr2_1:71160727-71160746 | None:intergenic | 35.0% |
| GTGTTGGGAATTGAAAAAGT+GGG | - | chr2_1:71160736-71160755 | None:intergenic | 35.0% | |
| ! | AGTGTTGGGAATTGAAAAAG+TGG | - | chr2_1:71160737-71160756 | None:intergenic | 35.0% |
| TTAAGAGAGAGAAGATGATG+TGG | - | chr2_1:71160760-71160779 | None:intergenic | 35.0% | |
| TTCAACTTTAACCTCTCCAA+TGG | + | chr2_1:71160791-71160810 | Msa0222150:intron | 35.0% | |
| ! | GAGACTTGGTTCATTTGATT+TGG | - | chr2_1:71161091-71161110 | None:intergenic | 35.0% |
| !! | TTGGAATTTGATTGGTTTCC+CGG | - | chr2_1:71161219-71161238 | None:intergenic | 35.0% |
| AAGAAGATTCCTTGACTGTT+GGG | - | chr2_1:71161251-71161270 | None:intergenic | 35.0% | |
| TGTATTACACTCGCCAAAAA+CGG | + | chr2_1:71161311-71161330 | Msa0222150:intron | 35.0% | |
| !! | ATGGCTTGTTGAATATGACA+TGG | - | chr2_1:71161409-71161428 | None:intergenic | 35.0% |
| AATATGAAAATGCCTTGCAG+TGG | - | chr2_1:71161439-71161458 | None:intergenic | 35.0% | |
| ACACACGTTAGGTATAAAGA+AGG | - | chr2_1:71161743-71161762 | None:intergenic | 35.0% | |
| GAAGAAAGAATACACACGTT+AGG | - | chr2_1:71161754-71161773 | None:intergenic | 35.0% | |
| AACGTGTGTATTCTTTCTTC+AGG | + | chr2_1:71161754-71161773 | Msa0222150:intron | 35.0% | |
| GTATTCTTTCTTCAGGAACA+AGG | + | chr2_1:71161761-71161780 | Msa0222150:intron | 35.0% | |
| TCTACAAGGTCAATTGTCTT+AGG | - | chr2_1:71161822-71161841 | None:intergenic | 35.0% | |
| ! | TTATGGTTGACTCATCTACA+AGG | - | chr2_1:71161836-71161855 | None:intergenic | 35.0% |
| TAACTCTGCAAACTCACTTA+TGG | - | chr2_1:71161853-71161872 | None:intergenic | 35.0% | |
| CATTGTTGAAAGGTTGTACA+AGG | - | chr2_1:71162000-71162019 | None:intergenic | 35.0% | |
| !! | GAAAAAGCTCTTGCTACTTT+AGG | + | chr2_1:71162098-71162117 | Msa0222150:CDS | 35.0% |
| !! | TGCTACTTTAGGTAACTTGT+TGG | + | chr2_1:71162109-71162128 | Msa0222150:CDS | 35.0% |
| !! | TAACTTGTTGGTCACGTTAA+TGG | + | chr2_1:71162121-71162140 | Msa0222150:CDS | 35.0% |
| !! | AACTTGTTGGTCACGTTAAT+GGG | + | chr2_1:71162122-71162141 | Msa0222150:CDS | 35.0% |
| AGCAATAGAGAACAACTCAA+TGG | + | chr2_1:71162151-71162170 | Msa0222150:CDS | 35.0% | |
| ACCAAAATGTCAAGAGTTGT+CGG | + | chr2_1:71162214-71162233 | Msa0222150:CDS | 35.0% | |
| ! | ATTGCTCTCTTTTGAGCTAA+AGG | - | chr2_1:71162344-71162363 | None:intergenic | 35.0% |
| GAGCAATGAAACTATTGCAA+TGG | + | chr2_1:71162357-71162376 | Msa0222150:CDS | 35.0% | |
| GGATGAAAGACAAGTAAAGA+TGG | + | chr2_1:71162385-71162404 | Msa0222150:CDS | 35.0% | |
| !! | ATTCCAAATCTTGGTGTTTG+TGG | - | chr2_1:71162425-71162444 | None:intergenic | 35.0% |
| ACAAACACCAAGATTTGGAA+TGG | + | chr2_1:71162424-71162443 | Msa0222150:CDS | 35.0% | |
| ! | CAAACACCAAGATTTGGAAT+GGG | + | chr2_1:71162425-71162444 | Msa0222150:CDS | 35.0% |
| ! | AAACACCAAGATTTGGAATG+GGG | + | chr2_1:71162426-71162445 | Msa0222150:CDS | 35.0% |
| CAACTTCGAAGTCTTCAATA+AGG | - | chr2_1:71162617-71162636 | None:intergenic | 35.0% | |
| ! | CACTGTATGTTTTGCCAAAA+TGG | - | chr2_1:71162707-71162726 | None:intergenic | 35.0% |
| !! | CAAAGTTATAGCGTCGATTT+CGG | + | chr2_1:71162738-71162757 | Msa0222150:three_prime_UTR | 35.0% |
| TGATGAAGGAGTTGACATGT+TGG | - | chr2_1:71158745-71158764 | None:intergenic | 40.0% | |
| ! | GCAAGTTATGGAGAAGCATA+AGG | + | chr2_1:71158944-71158963 | Msa0222150:CDS | 40.0% |
| ! | AGTTATGGAGAAGCATAAGG+AGG | + | chr2_1:71158947-71158966 | Msa0222150:CDS | 40.0% |
| ACAGTGAAGATGCTTCACTT+TGG | + | chr2_1:71159014-71159033 | Msa0222150:CDS | 40.0% | |
| !! | ACGTTGATTTACCTAGCTGA+TGG | + | chr2_1:71159194-71159213 | Msa0222150:CDS | 40.0% |
| !!! | ACCACTGATTTTGACTTTCG+GGG | + | chr2_1:71160177-71160196 | Msa0222150:intron | 40.0% |
| !!! | TTTTGACTTTCGGGGGAATA+AGG | + | chr2_1:71160185-71160204 | Msa0222150:intron | 40.0% |
| !! | CAAAGTGGTTATTGGTTTGG+CGG | + | chr2_1:71160224-71160243 | Msa0222150:intron | 40.0% |
| !! | AAAGTGGTTATTGGTTTGGC+GGG | + | chr2_1:71160225-71160244 | Msa0222150:intron | 40.0% |
| TACACTTTGGTTGTGACTTG+TGG | - | chr2_1:71160305-71160324 | None:intergenic | 40.0% | |
| !! | ACCAAAATGATGGGCTACTA+GGG | + | chr2_1:71160615-71160634 | Msa0222150:intron | 40.0% |
| ! | AGAAGATGATGTGGAGTGTT+GGG | - | chr2_1:71160751-71160770 | None:intergenic | 40.0% |
| AGAAGATTCCTTGACTGTTG+GGG | - | chr2_1:71161250-71161269 | None:intergenic | 40.0% | |
| GAAGAAGATTCCTTGACTGT+TGG | - | chr2_1:71161252-71161271 | None:intergenic | 40.0% | |
| !!! | GTTTTTGGCGAGTGTAATAC+AGG | - | chr2_1:71161312-71161331 | None:intergenic | 40.0% |
| ! | CAATTTGAGTGGTCCGTTTT+TGG | - | chr2_1:71161327-71161346 | None:intergenic | 40.0% |
| ! | GCTTGTTGAATATGACATGG+AGG | - | chr2_1:71161406-71161425 | None:intergenic | 40.0% |
| CAAGAGCTGAACAATGCTAT+AGG | - | chr2_1:71161644-71161663 | None:intergenic | 40.0% | |
| ! | GGCTCCTAAACATGATCTTT+TGG | - | chr2_1:71161979-71161998 | None:intergenic | 40.0% |
| ! | GCAAGCCCTTTAGTTTCTTA+TGG | + | chr2_1:71162029-71162048 | Msa0222150:CDS | 40.0% |
| ! | ACCGACAACTCTTGACATTT+TGG | - | chr2_1:71162218-71162237 | None:intergenic | 40.0% |
| GAGATAAAATGGCACAAGCT+AGG | + | chr2_1:71162279-71162298 | Msa0222150:CDS | 40.0% | |
| ACTCAAAGGGCAAATGCAAA+TGG | + | chr2_1:71162539-71162558 | Msa0222150:CDS | 40.0% | |
| CTCAAAGGGCAAATGCAAAT+GGG | + | chr2_1:71162540-71162559 | Msa0222150:CDS | 40.0% | |
| TCAAAGGGCAAATGCAAATG+GGG | + | chr2_1:71162541-71162560 | Msa0222150:CDS | 40.0% | |
| AACCAATGACTTGAGTTTGG+AGG | - | chr2_1:71162570-71162589 | None:intergenic | 40.0% | |
| TCTTCAATAAGGCAAGCTCT+TGG | - | chr2_1:71162606-71162625 | None:intergenic | 40.0% | |
| CCATGAGTTCGACATGATTA+CGG | + | chr2_1:71162671-71162690 | Msa0222150:three_prime_UTR | 40.0% | |
| CGAAATCGACGCTATAACTT+TGG | - | chr2_1:71162740-71162759 | None:intergenic | 40.0% | |
| AAGCAGAGCTGAACAGAACA+AGG | + | chr2_1:71158887-71158906 | Msa0222150:CDS | 45.0% | |
| ! | TATGGAGAAGCATAAGGAGG+AGG | + | chr2_1:71158950-71158969 | Msa0222150:CDS | 45.0% |
| ! | AGATGCTTCACTTTGGAAGC+TGG | + | chr2_1:71159021-71159040 | Msa0222150:CDS | 45.0% |
| ! | GATGCTTCACTTTGGAAGCT+GGG | + | chr2_1:71159022-71159041 | Msa0222150:CDS | 45.0% |
| TCTTCGATGACTAACCACCT+GGG | - | chr2_1:71159162-71159181 | None:intergenic | 45.0% | |
| ! | TGGTTAGTCATCGAAGAGCA+GGG | + | chr2_1:71159165-71159184 | Msa0222150:CDS | 45.0% |
| ACGTGTAAGTTCCATCAGCT+AGG | - | chr2_1:71159208-71159227 | None:intergenic | 45.0% | |
| ! | TGGTGATAGTTGAGGCATCA+TGG | + | chr2_1:71160137-71160156 | Msa0222150:intron | 45.0% |
| ! | GGTGATAGTTGAGGCATCAT+GGG | + | chr2_1:71160138-71160157 | Msa0222150:intron | 45.0% |
| !!! | CCACTGATTTTGACTTTCGG+GGG | + | chr2_1:71160178-71160197 | Msa0222150:intron | 45.0% |
| CAGTTTGGTTGTGGTTAGTG+TGG | - | chr2_1:71160265-71160284 | None:intergenic | 45.0% | |
| AATGGAGGCAGAGAGAATCA+TGG | + | chr2_1:71160374-71160393 | Msa0222150:intron | 45.0% | |
| TTCACGTTCTACTGCCTGTA+GGG | - | chr2_1:71160436-71160455 | None:intergenic | 45.0% | |
| TTTCACGTTCTACTGCCTGT+AGG | - | chr2_1:71160437-71160456 | None:intergenic | 45.0% | |
| !! | CACCAAAATGATGGGCTACT+AGG | + | chr2_1:71160614-71160633 | Msa0222150:intron | 45.0% |
| !! | CCAAAATGATGGGCTACTAG+GGG | + | chr2_1:71160616-71160635 | Msa0222150:intron | 45.0% |
| GCTGCTAGGACCATTTACAA+TGG | + | chr2_1:71160684-71160703 | Msa0222150:intron | 45.0% | |
| GAGAAGATGATGTGGAGTGT+TGG | - | chr2_1:71160752-71160771 | None:intergenic | 45.0% | |
| GACGCGTGTTGGAATTTGAT+TGG | - | chr2_1:71161227-71161246 | None:intergenic | 45.0% | |
| GAAGATTCCTTGACTGTTGG+GGG | - | chr2_1:71161249-71161268 | None:intergenic | 45.0% | |
| GCCATTAAACTACCACTGCA+AGG | + | chr2_1:71161424-71161443 | Msa0222150:intron | 45.0% | |
| GCCTTGCAGTGGTAGTTTAA+TGG | - | chr2_1:71161428-71161447 | None:intergenic | 45.0% | |
| CAGGAACAAGGCTATGATAG+TGG | + | chr2_1:71161773-71161792 | Msa0222150:intron | 45.0% | |
| !! | GAACAAGGCTATGATAGTGG+AGG | + | chr2_1:71161776-71161795 | Msa0222150:CDS | 45.0% |
| GTAAAGATGGGACCACATTC+TGG | + | chr2_1:71162398-71162417 | Msa0222150:CDS | 45.0% | |
| GGTCCACAAACACCAAGATT+TGG | + | chr2_1:71162419-71162438 | Msa0222150:CDS | 45.0% | |
| GTCCTCCAAACTCAAGTCAT+TGG | + | chr2_1:71162565-71162584 | Msa0222150:CDS | 45.0% | |
| CCGTAATCATGTCGAACTCA+TGG | - | chr2_1:71162674-71162693 | None:intergenic | 45.0% | |
| TGAGTTCGACATGATTACGG+TGG | + | chr2_1:71162674-71162693 | Msa0222150:three_prime_UTR | 45.0% | |
| TTTGCAGCCACACAGAGAAT+CGG | - | chr2_1:71162773-71162792 | None:intergenic | 45.0% | |
| ! | TGTAGGTGCTACACCAATTC+AGG | + | chr2_1:71162851-71162870 | Msa0222150:three_prime_UTR | 45.0% |
| !!! | AAATAATTTATTTTTTTGAA+AGG | + | chr2_1:71159926-71159945 | Msa0222150:intron | 5.0% |
| ! | AGAAGCATAAGGAGGAGGAG+AGG | + | chr2_1:71158955-71158974 | Msa0222150:CDS | 50.0% |
| GAAGCATAAGGAGGAGGAGA+GGG | + | chr2_1:71158956-71158975 | Msa0222150:CDS | 50.0% | |
| ! | CTTTGGAAGCTGGGAAGAGA+AGG | + | chr2_1:71159031-71159050 | Msa0222150:CDS | 50.0% |
| AACAGAACTTGGGGTTGTGC+CGG | + | chr2_1:71159115-71159134 | Msa0222150:CDS | 50.0% | |
| !! | TGTGCCGGTGTTGGTATCTA+TGG | + | chr2_1:71159130-71159149 | Msa0222150:CDS | 50.0% |
| GCCACCATAGATACCAACAC+CGG | - | chr2_1:71159137-71159156 | None:intergenic | 50.0% | |
| CTCTTCGATGACTAACCACC+TGG | - | chr2_1:71159163-71159182 | None:intergenic | 50.0% | |
| ! | GTGGTTAGTCATCGAAGAGC+AGG | + | chr2_1:71159164-71159183 | Msa0222150:CDS | 50.0% |
| ATTGTGGCACGAGCTTGAAC+TGG | - | chr2_1:71159292-71159311 | None:intergenic | 50.0% | |
| CCCCCGAAAGTCAAAATCAG+TGG | - | chr2_1:71160181-71160200 | None:intergenic | 50.0% | |
| TCACGTTCTACTGCCTGTAG+GGG | - | chr2_1:71160435-71160454 | None:intergenic | 50.0% | |
| ! | CCCCTAGTAGCCCATCATTT+TGG | - | chr2_1:71160619-71160638 | None:intergenic | 50.0% |
| !! | AAGGCTATGATAGTGGAGGC+AGG | + | chr2_1:71161780-71161799 | Msa0222150:CDS | 50.0% |
| GGTGTTTGTGGACCAGAATG+TGG | - | chr2_1:71162413-71162432 | None:intergenic | 50.0% | |
| GGTGACCCCATTCCAAATCT+TGG | - | chr2_1:71162434-71162453 | None:intergenic | 50.0% | |
| !!! | ACGGTGGACTGTTGCCATTT+TGG | + | chr2_1:71162690-71162709 | Msa0222150:three_prime_UTR | 50.0% |
| ! | ATCTCAGCCGATTCTCTGTG+TGG | + | chr2_1:71162763-71162782 | Msa0222150:three_prime_UTR | 50.0% |
| !! | ACAGCGCTTTCGGGTTGCTT+TGG | - | chr2_1:71158838-71158857 | None:intergenic | 55.0% |
| GGAGGATTCACAGCGCTTTC+GGG | - | chr2_1:71158847-71158866 | None:intergenic | 55.0% | |
| CGGAGGATTCACAGCGCTTT+CGG | - | chr2_1:71158848-71158867 | None:intergenic | 55.0% | |
| TGGAAGCTGGGAAGAGAAGG+AGG | + | chr2_1:71159034-71159053 | Msa0222150:CDS | 55.0% | |
| !! | GCCGGTGTTGGTATCTATGG+TGG | + | chr2_1:71159133-71159152 | Msa0222150:CDS | 55.0% |
| GGTATCTATGGTGGCTTCCC+AGG | + | chr2_1:71159142-71159161 | Msa0222150:CDS | 55.0% | |
| ATCTATGGTGGCTTCCCAGG+TGG | + | chr2_1:71159145-71159164 | Msa0222150:CDS | 55.0% | |
| GGAGGCAGAGAGAATCATGG+TGG | + | chr2_1:71160377-71160396 | Msa0222150:intron | 55.0% | |
| GAGTTGAGTGTCTCCCCTAC+AGG | + | chr2_1:71160419-71160438 | Msa0222150:intron | 55.0% | |
| GGCGCGTAAATGACAGAGGA+CGG | - | chr2_1:71161280-71161299 | None:intergenic | 55.0% | |
| ACAGGGCGCGTAAATGACAG+AGG | - | chr2_1:71161284-71161303 | None:intergenic | 55.0% | |
| ! | CTGTCATTTACGCGCCCTGT+CGG | + | chr2_1:71161284-71161303 | Msa0222150:intron | 55.0% |
| !! | GTGTAATACAGGCGCCGACA+GGG | - | chr2_1:71161301-71161320 | None:intergenic | 55.0% |
| !! | AGTGTAATACAGGCGCCGAC+AGG | - | chr2_1:71161302-71161321 | None:intergenic | 55.0% |
| ACCACTCAAATTGCGACGCG+TGG | + | chr2_1:71161334-71161353 | Msa0222150:intron | 55.0% | |
| GCATAAGGAGGAGGAGAGGG+AGG | + | chr2_1:71158959-71158978 | Msa0222150:CDS | 60.0% | |
| TAAGGAGGAGGAGAGGGAGG+AGG | + | chr2_1:71158962-71158981 | Msa0222150:CDS | 60.0% | |
| ! | ACTTGGGGTTGTGCCGGTGT+TGG | + | chr2_1:71159121-71159140 | Msa0222150:CDS | 60.0% |
| GCCACGCGTCGCAATTTGAG+TGG | - | chr2_1:71161338-71161357 | None:intergenic | 60.0% | |
| GACTGTTGGGGGACGCGTGT+TGG | - | chr2_1:71161238-71161257 | None:intergenic | 65.0% | |
| CACGCGTCCCCCAACAGTCA+AGG | + | chr2_1:71161239-71161258 | Msa0222150:intron | 65.0% | |
| GGAGGAGGAGAGGGAGGAGG+TGG | + | chr2_1:71158965-71158984 | Msa0222150:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 71158719 | 71162892 | 71158719 | ID=Msa0222150;Name=Msa0222150 |
| chr2_1 | mRNA | 71158719 | 71162892 | 71158719 | ID=Msa0222150-mRNA-1;Parent=Msa0222150;Name=Msa0222150-mRNA-1;_AED=0.02;_eAED=0.02;_QI=28|1|1|1|1|1|2|270|441 |
| chr2_1 | exon | 71158719 | 71159225 | 71158719 | ID=Msa0222150-mRNA-1:exon:20424;Parent=Msa0222150-mRNA-1 |
| chr2_1 | exon | 71161776 | 71162892 | 71161776 | ID=Msa0222150-mRNA-1:exon:20425;Parent=Msa0222150-mRNA-1 |
| chr2_1 | five_prime_UTR | 71158719 | 71158746 | 71158719 | ID=Msa0222150-mRNA-1:five_prime_utr;Parent=Msa0222150-mRNA-1 |
| chr2_1 | CDS | 71158747 | 71159225 | 71158747 | ID=Msa0222150-mRNA-1:cds;Parent=Msa0222150-mRNA-1 |
| chr2_1 | CDS | 71161776 | 71162622 | 71161776 | ID=Msa0222150-mRNA-1:cds;Parent=Msa0222150-mRNA-1 |
| chr2_1 | three_prime_UTR | 71162623 | 71162892 | 71162623 | ID=Msa0222150-mRNA-1:three_prime_utr;Parent=Msa0222150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
