Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0992510 | XP_013449941.1 | 99.387 | 326 | 2 | 0 | 1 | 326 | 1 | 326 | 0.0 | 657 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0992510 | sp|Q9CAN1|RBL2_ARATH | 66.254 | 323 | 103 | 2 | 1 | 323 | 1 | 317 | 5.26e-148 | 422 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0992510 | B7FIQ5 | 99.387 | 326 | 2 | 0 | 1 | 326 | 1 | 326 | 0.0 | 657 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000910 | Msa0992510 | 0.831645 | 1.484675e-55 | -8.615850e-47 |
| Msa0005380 | Msa0992510 | 0.808856 | 2.520993e-50 | -8.615850e-47 |
| Msa0011840 | Msa0992510 | 0.817302 | 3.538975e-52 | -8.615850e-47 |
| Msa0024400 | Msa0992510 | 0.865491 | 5.681446e-65 | -8.615850e-47 |
| Msa0026780 | Msa0992510 | 0.825143 | 5.503654e-54 | -8.615850e-47 |
| Msa0028620 | Msa0992510 | 0.802477 | 5.507624e-49 | -8.615850e-47 |
| Msa0053860 | Msa0992510 | 0.808556 | 2.923142e-50 | -8.615850e-47 |
| Msa0060730 | Msa0992510 | -0.801603 | 8.330223e-49 | -8.615850e-47 |
| Msa0076290 | Msa0992510 | 0.849361 | 3.396501e-60 | -8.615850e-47 |
| Msa0081020 | Msa0992510 | 0.818867 | 1.566205e-52 | -8.615850e-47 |
| Msa0091730 | Msa0992510 | 0.850398 | 1.742606e-60 | -8.615850e-47 |
| Msa0099700 | Msa0992510 | 0.819694 | 1.015450e-52 | -8.615850e-47 |
| Msa0104670 | Msa0992510 | 0.812649 | 3.812530e-51 | -8.615850e-47 |
| Msa0105410 | Msa0992510 | 0.833011 | 6.813968e-56 | -8.615850e-47 |
| Msa0106710 | Msa0992510 | 0.808364 | 3.212421e-50 | -8.615850e-47 |
| Msa0115790 | Msa0992510 | 0.819225 | 1.298644e-52 | -8.615850e-47 |
| Msa0120280 | Msa0992510 | 0.826925 | 2.075317e-54 | -8.615850e-47 |
| Msa0604290 | Msa0992510 | 0.842560 | 2.399655e-58 | -8.615850e-47 |
| Msa0606080 | Msa0992510 | 0.833035 | 6.718526e-56 | -8.615850e-47 |
| Msa0610550 | Msa0992510 | 0.804231 | 2.385344e-49 | -8.615850e-47 |
| Msa0611540 | Msa0992510 | -0.800637 | 1.312832e-48 | -8.615850e-47 |
| Msa0619780 | Msa0992510 | 0.830337 | 3.107993e-55 | -8.615850e-47 |
| Msa0623990 | Msa0992510 | 0.802386 | 5.749745e-49 | -8.615850e-47 |
| Msa0624060 | Msa0992510 | 0.802500 | 5.448685e-49 | -8.615850e-47 |
| Msa0629240 | Msa0992510 | 0.809111 | 2.223957e-50 | -8.615850e-47 |
| Msa0645530 | Msa0992510 | 0.805925 | 1.054743e-49 | -8.615850e-47 |
| Msa0646020 | Msa0992510 | 0.827294 | 1.693852e-54 | -8.615850e-47 |
| Msa0646420 | Msa0992510 | 0.831818 | 1.345429e-55 | -8.615850e-47 |
| Msa0651560 | Msa0992510 | 0.875442 | 3.071064e-68 | -8.615850e-47 |
| Msa0661830 | Msa0992510 | 0.808175 | 3.524523e-50 | -8.615850e-47 |
| Msa0662220 | Msa0992510 | 0.830645 | 2.614016e-55 | -8.615850e-47 |
| Msa0665530 | Msa0992510 | -0.811090 | 8.329116e-51 | -8.615850e-47 |
| Msa0673120 | Msa0992510 | 0.806250 | 9.010823e-50 | -8.615850e-47 |
| Msa0676130 | Msa0992510 | 0.803826 | 2.896562e-49 | -8.615850e-47 |
| Msa0676180 | Msa0992510 | 0.805423 | 1.344763e-49 | -8.615850e-47 |
| Msa0677530 | Msa0992510 | 0.826479 | 2.652116e-54 | -8.615850e-47 |
| Msa0679360 | Msa0992510 | 0.807869 | 4.094865e-50 | -8.615850e-47 |
| Msa0690310 | Msa0992510 | 0.807852 | 4.127824e-50 | -8.615850e-47 |
| Msa0692980 | Msa0992510 | 0.843927 | 1.036899e-58 | -8.615850e-47 |
| Msa0693330 | Msa0992510 | 0.821041 | 4.984408e-53 | -8.615850e-47 |
| Msa0698100 | Msa0992510 | 0.804779 | 1.833623e-49 | -8.615850e-47 |
| Msa0702410 | Msa0992510 | 0.852943 | 3.311785e-61 | -8.615850e-47 |
| Msa0702720 | Msa0992510 | 0.829254 | 5.704779e-55 | -8.615850e-47 |
| Msa0703800 | Msa0992510 | 0.801341 | 9.425912e-49 | -8.615850e-47 |
| Msa0706230 | Msa0992510 | 0.849685 | 2.759051e-60 | -8.615850e-47 |
| Msa0709270 | Msa0992510 | 0.800336 | 1.511965e-48 | -8.615850e-47 |
| Msa0813530 | Msa0992510 | 0.803447 | 3.470299e-49 | -8.615850e-47 |
| Msa0818060 | Msa0992510 | 0.804100 | 2.540162e-49 | -8.615850e-47 |
| Msa0819490 | Msa0992510 | 0.801783 | 7.650753e-49 | -8.615850e-47 |
| Msa0828590 | Msa0992510 | 0.815822 | 7.591723e-52 | -8.615850e-47 |
| Msa0829330 | Msa0992510 | 0.803644 | 3.158876e-49 | -8.615850e-47 |
| Msa0833530 | Msa0992510 | 0.817571 | 3.077025e-52 | -8.615850e-47 |
| Msa0122530 | Msa0992510 | 0.875692 | 2.522565e-68 | -8.615850e-47 |
| Msa0124320 | Msa0992510 | 0.809149 | 2.181906e-50 | -8.615850e-47 |
| Msa0139550 | Msa0992510 | -0.813588 | 2.372631e-51 | -8.615850e-47 |
| Msa0141400 | Msa0992510 | 0.809421 | 1.907663e-50 | -8.615850e-47 |
| Msa0148320 | Msa0992510 | 0.806724 | 7.158880e-50 | -8.615850e-47 |
| Msa0163510 | Msa0992510 | 0.863947 | 1.729652e-64 | -8.615850e-47 |
| Msa0171870 | Msa0992510 | 0.809545 | 1.794751e-50 | -8.615850e-47 |
| Msa0173800 | Msa0992510 | 0.815498 | 8.962954e-52 | -8.615850e-47 |
| Msa0189530 | Msa0992510 | 0.805189 | 1.505019e-49 | -8.615850e-47 |
| Msa0194920 | Msa0992510 | 0.853379 | 2.484487e-61 | -8.615850e-47 |
| Msa0204960 | Msa0992510 | 0.855374 | 6.585230e-62 | -8.615850e-47 |
| Msa0215990 | Msa0992510 | 0.850479 | 1.654126e-60 | -8.615850e-47 |
| Msa0217670 | Msa0992510 | 0.863980 | 1.689534e-64 | -8.615850e-47 |
| Msa0222150 | Msa0992510 | 0.818240 | 2.173657e-52 | -8.615850e-47 |
| Msa0223340 | Msa0992510 | 0.800198 | 1.612442e-48 | -8.615850e-47 |
| Msa0226260 | Msa0992510 | 0.827280 | 1.707135e-54 | -8.615850e-47 |
| Msa0234090 | Msa0992510 | 0.804774 | 1.838182e-49 | -8.615850e-47 |
| Msa0236920 | Msa0992510 | 0.834777 | 2.463396e-56 | -8.615850e-47 |
| Msa0237300 | Msa0992510 | 0.858892 | 6.030408e-63 | -8.615850e-47 |
| Msa0237420 | Msa0992510 | 0.810565 | 1.082060e-50 | -8.615850e-47 |
| Msa0374220 | Msa0992510 | 0.855300 | 6.921581e-62 | -8.615850e-47 |
| Msa0376630 | Msa0992510 | 0.806384 | 8.446267e-50 | -8.615850e-47 |
| Msa0377290 | Msa0992510 | 0.819337 | 1.224495e-52 | -8.615850e-47 |
| Msa0377820 | Msa0992510 | 0.809090 | 2.246553e-50 | -8.615850e-47 |
| Msa0379790 | Msa0992510 | -0.802938 | 4.424205e-49 | -8.615850e-47 |
| Msa0382370 | Msa0992510 | 0.818600 | 1.800793e-52 | -8.615850e-47 |
| Msa0385500 | Msa0992510 | 0.832082 | 1.158129e-55 | -8.615850e-47 |
| Msa0395980 | Msa0992510 | 0.834962 | 2.212656e-56 | -8.615850e-47 |
| Msa0416510 | Msa0992510 | 0.804617 | 1.982559e-49 | -8.615850e-47 |
| Msa0418930 | Msa0992510 | 0.816443 | 5.514774e-52 | -8.615850e-47 |
| Msa0426580 | Msa0992510 | 0.810851 | 9.384842e-51 | -8.615850e-47 |
| Msa0432160 | Msa0992510 | 0.834931 | 2.253443e-56 | -8.615850e-47 |
| Msa0439960 | Msa0992510 | 0.852926 | 3.350459e-61 | -8.615850e-47 |
| Msa0440510 | Msa0992510 | 0.855030 | 8.290377e-62 | -8.615850e-47 |
| Msa0450400 | Msa0992510 | -0.816270 | 6.028598e-52 | -8.615850e-47 |
| Msa0465500 | Msa0992510 | 0.809144 | 2.187335e-50 | -8.615850e-47 |
| Msa0469890 | Msa0992510 | 0.844028 | 9.743807e-59 | -8.615850e-47 |
| Msa0470880 | Msa0992510 | 0.801809 | 7.557690e-49 | -8.615850e-47 |
| Msa0472930 | Msa0992510 | 0.810078 | 1.378511e-50 | -8.615850e-47 |
| Msa0476680 | Msa0992510 | 0.834009 | 3.840415e-56 | -8.615850e-47 |
| Msa0478370 | Msa0992510 | 0.806445 | 8.196339e-50 | -8.615850e-47 |
| Msa0980540 | Msa0992510 | 0.816922 | 4.308469e-52 | -8.615850e-47 |
| Msa0985180 | Msa0992510 | 0.824550 | 7.595838e-54 | -8.615850e-47 |
| Msa0992510 | Msa0993190 | 0.830084 | 3.584341e-55 | -8.615850e-47 |
| Msa0992510 | Msa0999680 | 0.800387 | 1.476072e-48 | -8.615850e-47 |
| Msa0992510 | Msa1002960 | 0.817050 | 4.031537e-52 | -8.615850e-47 |
| Msa0992510 | Msa1012710 | 0.809385 | 1.942729e-50 | -8.615850e-47 |
| Msa0992510 | Msa1036300 | 0.812870 | 3.410593e-51 | -8.615850e-47 |
| Msa0992510 | Msa1037520 | 0.817963 | 2.510367e-52 | -8.615850e-47 |
| Msa0992510 | Msa1047760 | 0.849205 | 3.754146e-60 | -8.615850e-47 |
| Msa0992510 | Msa1080140 | 0.804013 | 2.647959e-49 | -8.615850e-47 |
| Msa0992510 | Msa1089450 | 0.812425 | 4.266688e-51 | -8.615850e-47 |
| Msa0992510 | Msa1118860 | 0.826020 | 3.411248e-54 | -8.615850e-47 |
| Msa0992510 | Msa1122150 | 0.805869 | 1.084078e-49 | -8.615850e-47 |
| Msa0992510 | Msa1128270 | 0.808942 | 2.417319e-50 | -8.615850e-47 |
| Msa0992510 | Msa1130400 | 0.807819 | 4.194529e-50 | -8.615850e-47 |
| Msa0992510 | Msa1132470 | 0.813232 | 2.840876e-51 | -8.615850e-47 |
| Msa0992510 | Msa1133590 | 0.818925 | 1.519438e-52 | -8.615850e-47 |
| Msa0992510 | Msa1140540 | 0.800256 | 1.569350e-48 | -8.615850e-47 |
| Msa0992510 | Msa1178580 | 0.828970 | 6.687198e-55 | -8.615850e-47 |
| Msa0992510 | Msa1184230 | 0.866668 | 2.410293e-65 | -8.615850e-47 |
| Msa0992510 | Msa1184690 | 0.830595 | 2.688803e-55 | -8.615850e-47 |
| Msa0992510 | Msa1188180 | 0.803838 | 2.879166e-49 | -8.615850e-47 |
| Msa0992510 | Msa1190100 | -0.830831 | 2.353070e-55 | -8.615850e-47 |
| Msa0992510 | Msa1191180 | 0.821161 | 4.676794e-53 | -8.615850e-47 |
| Msa0992510 | Msa1212830 | 0.816376 | 5.708890e-52 | -8.615850e-47 |
| Msa0992510 | Msa1213040 | 0.805648 | 1.206021e-49 | -8.615850e-47 |
| Msa0992510 | Msa1213890 | 0.838292 | 3.135534e-57 | -8.615850e-47 |
| Msa0992510 | Msa1213980 | 0.821003 | 5.085119e-53 | -8.615850e-47 |
| Msa0992510 | Msa1226460 | 0.803339 | 3.654897e-49 | -8.615850e-47 |
| Msa0992510 | Msa1228040 | 0.880209 | 6.625529e-70 | -8.615850e-47 |
| Msa0992510 | Msa1233850 | 0.808764 | 2.638251e-50 | -8.615850e-47 |
| Msa0992510 | Msa1236440 | 0.802104 | 6.572270e-49 | -8.615850e-47 |
| Msa0992510 | Msa1238600 | 0.846618 | 1.939291e-59 | -8.615850e-47 |
| Msa0992510 | Msa1244500 | 0.821686 | 3.539054e-53 | -8.615850e-47 |
| Msa0992510 | Msa1255210 | 0.800161 | 1.641327e-48 | -8.615850e-47 |
| Msa0992510 | Msa1258030 | -0.821667 | 3.574100e-53 | -8.615850e-47 |
| Msa0992510 | Msa1260220 | 0.823789 | 1.146153e-53 | -8.615850e-47 |
| Msa0992510 | Msa1271130 | 0.867408 | 1.398964e-65 | -8.615850e-47 |
| Msa0992510 | Msa1276150 | 0.832342 | 9.982903e-56 | -8.615850e-47 |
| Msa0992510 | Msa1283740 | 0.803258 | 3.798993e-49 | -8.615850e-47 |
| Msa0992510 | Msa1292020 | 0.800032 | 1.742965e-48 | -8.615850e-47 |
| Msa0992510 | Msa1297530 | 0.800434 | 1.443907e-48 | -8.615850e-47 |
| Msa0992510 | Msa1308220 | 0.855922 | 4.557104e-62 | -8.615850e-47 |
| Msa0992510 | Msa1325410 | -0.808250 | 3.396241e-50 | -8.615850e-47 |
| Msa0992510 | Msa1327640 | 0.838264 | 3.188007e-57 | -8.615850e-47 |
| Msa0992510 | Msa1331760 | 0.815824 | 7.585814e-52 | -8.615850e-47 |
| Msa0992510 | Msa1338370 | 0.800925 | 1.146412e-48 | -8.615850e-47 |
| Msa0992510 | Msa1340200 | 0.833871 | 4.157431e-56 | -8.615850e-47 |
| Msa0992510 | Msa1341060 | 0.829808 | 4.183359e-55 | -8.615850e-47 |
| Msa0992510 | Msa1341300 | 0.813940 | 1.984097e-51 | -8.615850e-47 |
| Msa0992510 | Msa1341840 | 0.810189 | 1.304742e-50 | -8.615850e-47 |
| Msa0992510 | Msa1345100 | 0.830235 | 3.291562e-55 | -8.615850e-47 |
| Msa0992510 | Msa1356960 | 0.804884 | 1.743518e-49 | -8.615850e-47 |
| Msa0992510 | Msa1357560 | 0.854139 | 1.502188e-61 | -8.615850e-47 |
| Msa0992510 | Msa1369920 | -0.804347 | 2.256420e-49 | -8.615850e-47 |
| Msa0992510 | Msa1373850 | 0.829925 | 3.917322e-55 | -8.615850e-47 |
| Msa0992510 | Msa1378410 | 0.806020 | 1.007584e-49 | -8.615850e-47 |
| Msa0992510 | Msa1384760 | -0.800301 | 1.537179e-48 | -8.615850e-47 |
| Msa0992510 | Msa1392980 | 0.868129 | 8.214867e-66 | -8.615850e-47 |
| Msa0992510 | Msa1407760 | 0.803171 | 3.959401e-49 | -8.615850e-47 |
| Msa0992510 | Msa1410550 | 0.814539 | 1.463702e-51 | -8.615850e-47 |
| Msa0992510 | Msa1414820 | 0.848849 | 4.715833e-60 | -8.615850e-47 |
| Msa0992510 | Msa1417440 | -0.800832 | 1.197772e-48 | -8.615850e-47 |
| Msa0992510 | Msa1419690 | 0.840699 | 7.430213e-58 | -8.615850e-47 |
| Msa0992510 | Msa1419840 | 0.808851 | 2.527750e-50 | -8.615850e-47 |
| Msa0992510 | Msa1433700 | 0.829720 | 4.395309e-55 | -8.615850e-47 |
| Msa0992510 | Msa1435360 | 0.819487 | 1.132155e-52 | -8.615850e-47 |
| Msa0992510 | Msa1437730 | 0.813894 | 2.031449e-51 | -8.615850e-47 |
| Msa0992510 | Msa1442920 | 0.843225 | 1.596792e-58 | -8.615850e-47 |
| Msa0992510 | Msa1443180 | 0.807066 | 6.059564e-50 | -8.615850e-47 |
| Msa0992510 | Msa1446080 | 0.810375 | 1.189374e-50 | -8.615850e-47 |
| Msa0992510 | Msa1452710 | 0.819748 | 9.869149e-53 | -8.615850e-47 |
| Msa0992510 | Msa1458290 | 0.814010 | 1.915523e-51 | -8.615850e-47 |
| Msa0992510 | Msa1458680 | 0.807380 | 5.200028e-50 | -8.615850e-47 |
| Msa0992510 | Msa1464090 | 0.805581 | 1.245783e-49 | -8.615850e-47 |
| Msa0240900 | Msa0992510 | 0.821760 | 3.401050e-53 | -8.615850e-47 |
| Msa0249860 | Msa0992510 | 0.801206 | 1.004434e-48 | -8.615850e-47 |
| Msa0256140 | Msa0992510 | 0.832880 | 7.342682e-56 | -8.615850e-47 |
| Msa0257490 | Msa0992510 | 0.828788 | 7.398536e-55 | -8.615850e-47 |
| Msa0263920 | Msa0992510 | 0.841284 | 5.215009e-58 | -8.615850e-47 |
| Msa0269970 | Msa0992510 | 0.826138 | 3.197184e-54 | -8.615850e-47 |
| Msa0274720 | Msa0992510 | 0.868268 | 7.405864e-66 | -8.615850e-47 |
| Msa0281530 | Msa0992510 | 0.830745 | 2.469596e-55 | -8.615850e-47 |
| Msa0287870 | Msa0992510 | 0.812704 | 3.708770e-51 | -8.615850e-47 |
| Msa0296790 | Msa0992510 | 0.840077 | 1.080578e-57 | -8.615850e-47 |
| Msa0304570 | Msa0992510 | 0.804153 | 2.476305e-49 | -8.615850e-47 |
| Msa0304730 | Msa0992510 | 0.839656 | 1.390610e-57 | -8.615850e-47 |
| Msa0315520 | Msa0992510 | 0.868357 | 6.936736e-66 | -8.615850e-47 |
| Msa0317970 | Msa0992510 | 0.821253 | 4.454933e-53 | -8.615850e-47 |
| Msa0321690 | Msa0992510 | 0.815074 | 1.113767e-51 | -8.615850e-47 |
| Msa0336450 | Msa0992510 | 0.800040 | 1.736812e-48 | -8.615850e-47 |
| Msa0361850 | Msa0992510 | 0.824533 | 7.668146e-54 | -8.615850e-47 |
| Msa0362890 | Msa0992510 | 0.836829 | 7.441343e-57 | -8.615850e-47 |
| Msa0363640 | Msa0992510 | 0.804741 | 1.867241e-49 | -8.615850e-47 |
| Msa0491000 | Msa0992510 | 0.847489 | 1.119987e-59 | -8.615850e-47 |
| Msa0515340 | Msa0992510 | 0.854568 | 1.128768e-61 | -8.615850e-47 |
| Msa0517590 | Msa0992510 | 0.812235 | 4.694792e-51 | -8.615850e-47 |
| Msa0521010 | Msa0992510 | 0.833459 | 5.267569e-56 | -8.615850e-47 |
| Msa0522500 | Msa0992510 | 0.800226 | 1.591647e-48 | -8.615850e-47 |
| Msa0527540 | Msa0992510 | 0.868378 | 6.827315e-66 | -8.615850e-47 |
| Msa0542290 | Msa0992510 | 0.805708 | 1.171845e-49 | -8.615850e-47 |
| Msa0542560 | Msa0992510 | 0.836099 | 1.140926e-56 | -8.615850e-47 |
| Msa0549950 | Msa0992510 | 0.826489 | 2.637691e-54 | -8.615850e-47 |
| Msa0576790 | Msa0992510 | 0.851480 | 8.636518e-61 | -8.615850e-47 |
| Msa0577770 | Msa0992510 | 0.805387 | 1.367848e-49 | -8.615850e-47 |
| Msa0592330 | Msa0992510 | 0.803161 | 3.978083e-49 | -8.615850e-47 |
| Msa0600450 | Msa0992510 | 0.807034 | 6.157032e-50 | -8.615850e-47 |
| Msa0854000 | Msa0992510 | 0.826565 | 2.530503e-54 | -8.615850e-47 |
| Msa0855870 | Msa0992510 | 0.826403 | 2.765742e-54 | -8.615850e-47 |
| Msa0878220 | Msa0992510 | 0.845844 | 3.151856e-59 | -8.615850e-47 |
| Msa0891590 | Msa0992510 | 0.870147 | 1.816872e-66 | -8.615850e-47 |
| Msa0910960 | Msa0992510 | 0.944809 | 9.833329e-104 | -8.615850e-47 |
| Msa0928180 | Msa0992510 | 0.821896 | 3.163683e-53 | -8.615850e-47 |
| Msa0933760 | Msa0992510 | 0.834379 | 3.101859e-56 | -8.615850e-47 |
| Msa0934140 | Msa0992510 | 0.804525 | 2.071432e-49 | -8.615850e-47 |
| Msa0943970 | Msa0992510 | 0.836982 | 6.797768e-57 | -8.615850e-47 |
| Msa0944020 | Msa0992510 | 0.852499 | 4.436063e-61 | -8.615850e-47 |
| Msa0946110 | Msa0992510 | 0.832304 | 1.020526e-55 | -8.615850e-47 |
| Msa0965290 | Msa0992510 | 0.801214 | 1.000864e-48 | -8.615850e-47 |
| Msa0971650 | Msa0992510 | 0.802011 | 6.868405e-49 | -8.615850e-47 |
| Msa0972680 | Msa0992510 | 0.809253 | 2.073488e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0992510 | MtrunA17_Chr6g0472501 | 99.387 | 326 | 2 | 0 | 1 | 326 | 1 | 326 | 0.0 | 657 |
| Msa0992510 | MtrunA17_Chr4g0009841 | 62.577 | 326 | 110 | 4 | 6 | 323 | 8 | 329 | 5.87e-144 | 411 |
| Msa0992510 | MtrunA17_Chr1g0203681 | 63.804 | 326 | 98 | 4 | 4 | 326 | 10 | 318 | 4.13e-139 | 396 |
| Msa0992510 | MtrunA17_Chr2g0328271 | 63.973 | 297 | 101 | 2 | 34 | 326 | 43 | 337 | 1.14e-129 | 375 |
| Msa0992510 | MtrunA17_Chr7g0238701 | 61.017 | 295 | 109 | 3 | 34 | 326 | 25 | 315 | 1.25e-126 | 366 |
| Msa0992510 | MtrunA17_Chr2g0332941 | 56.884 | 276 | 111 | 3 | 34 | 302 | 30 | 304 | 7.88e-106 | 311 |
| Msa0992510 | MtrunA17_Chr3g0115331 | 43.919 | 296 | 156 | 2 | 37 | 325 | 42 | 334 | 4.23e-75 | 235 |
| Msa0992510 | MtrunA17_Chr2g0322601 | 38.624 | 189 | 92 | 4 | 134 | 320 | 1 | 167 | 3.94e-29 | 110 |
| Msa0992510 | MtrunA17_Chr2g0322611 | 46.237 | 93 | 50 | 0 | 90 | 182 | 1 | 93 | 7.90e-23 | 90.9 |
| Msa0992510 | MtrunA17_Chr6g0457251 | 29.213 | 178 | 109 | 4 | 105 | 271 | 206 | 377 | 4.80e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0992510 | AT1G63120.1 | 66.254 | 323 | 103 | 2 | 1 | 323 | 1 | 317 | 5.34e-149 | 422 |
| Msa0992510 | AT5G07250.1 | 65.179 | 336 | 104 | 3 | 1 | 325 | 12 | 345 | 3.06e-144 | 410 |
| Msa0992510 | AT2G29050.1 | 64.784 | 301 | 99 | 3 | 29 | 326 | 48 | 344 | 9.05e-141 | 404 |
| Msa0992510 | AT1G12750.4 | 59.259 | 324 | 114 | 3 | 1 | 323 | 1 | 307 | 3.16e-136 | 389 |
| Msa0992510 | AT1G12750.7 | 59.259 | 324 | 114 | 3 | 1 | 323 | 1 | 307 | 3.16e-136 | 389 |
| Msa0992510 | AT1G12750.6 | 59.259 | 324 | 114 | 3 | 1 | 323 | 1 | 307 | 3.16e-136 | 389 |
| Msa0992510 | AT1G12750.3 | 59.259 | 324 | 114 | 3 | 1 | 323 | 1 | 307 | 3.16e-136 | 389 |
| Msa0992510 | AT1G12750.1 | 59.259 | 324 | 114 | 3 | 1 | 323 | 1 | 307 | 3.16e-136 | 389 |
| Msa0992510 | AT3G53780.2 | 53.079 | 341 | 135 | 4 | 3 | 324 | 13 | 347 | 9.16e-123 | 358 |
| Msa0992510 | AT2G29050.2 | 58.746 | 303 | 89 | 5 | 29 | 299 | 48 | 346 | 1.08e-118 | 346 |
| Msa0992510 | AT5G07250.2 | 54.167 | 336 | 94 | 4 | 1 | 325 | 12 | 298 | 2.24e-105 | 310 |
| Msa0992510 | AT3G53780.3 | 53.115 | 305 | 118 | 4 | 3 | 288 | 13 | 311 | 3.84e-105 | 310 |
| Msa0992510 | AT1G52580.1 | 53.310 | 287 | 123 | 5 | 23 | 302 | 17 | 299 | 3.23e-100 | 298 |
| Msa0992510 | AT3G53780.1 | 58.667 | 225 | 91 | 1 | 100 | 324 | 1 | 223 | 7.09e-97 | 288 |
| Msa0992510 | AT4G23070.1 | 52.960 | 321 | 138 | 3 | 2 | 321 | 4 | 312 | 2.48e-96 | 288 |
| Msa0992510 | AT1G77860.1 | 44.108 | 297 | 153 | 3 | 37 | 325 | 48 | 339 | 7.94e-87 | 265 |
| Msa0992510 | AT1G77860.2 | 44.108 | 297 | 153 | 3 | 37 | 325 | 48 | 339 | 1.14e-86 | 266 |
| Msa0992510 | AT1G12750.2 | 58.852 | 209 | 69 | 2 | 1 | 209 | 1 | 192 | 1.57e-84 | 253 |
| Msa0992510 | AT1G12750.5 | 59.223 | 206 | 67 | 2 | 1 | 206 | 1 | 189 | 1.90e-84 | 254 |
| Msa0992510 | AT1G25290.2 | 33.974 | 156 | 101 | 2 | 104 | 258 | 157 | 311 | 2.92e-16 | 79.0 |
| Msa0992510 | AT1G25290.1 | 32.716 | 162 | 102 | 2 | 104 | 258 | 157 | 318 | 2.42e-15 | 76.3 |
Find 97 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAACTACACTCACTTTAT+TGG | 0.122578 | 6_4:+61355951 | None:intergenic |
| TTTCCAAACTTTCCTTCTTT+TGG | 0.166268 | 6_4:-61358567 | Msa0992510:five_prime_UTR |
| AAGGAAAGTTTGGAAATTTA+TGG | 0.166349 | 6_4:+61358574 | None:intergenic |
| ATTCGCCTTGAACAACAATT+TGG | 0.203114 | 6_4:-61356505 | Msa0992510:CDS |
| AGGTTTACCAATATGTTCTA+TGG | 0.211456 | 6_4:-61355145 | Msa0992510:CDS |
| ATCAGTTATTAGTTTGTCTT+TGG | 0.242343 | 6_4:-61354093 | Msa0992510:three_prime_UTR |
| TTCCTTCCCCGTCCTCAATT+TGG | 0.259184 | 6_4:-61355221 | Msa0992510:CDS |
| AGCATCTCCGTTGGTGCTTC+CGG | 0.298447 | 6_4:-61356036 | Msa0992510:CDS |
| CATGATGTCCAACTAGTTTC+TGG | 0.304655 | 6_4:+61358409 | None:intergenic |
| TATCCAAAAGAAGGAAAGTT+TGG | 0.304895 | 6_4:+61358564 | None:intergenic |
| ACTAATAACTGATTCTTATA+AGG | 0.319688 | 6_4:+61354103 | None:intergenic |
| CATGTGTTCCAACTTCTAAA+TGG | 0.341794 | 6_4:-61354221 | Msa0992510:CDS |
| GGAATCGTTTACCTAGTATC+TGG | 0.345805 | 6_4:-61356099 | Msa0992510:CDS |
| GTTTATTATTGTCATCAATC+TGG | 0.356206 | 6_4:-61355321 | Msa0992510:CDS |
| AATATATATCATATAGATAA+AGG | 0.360493 | 6_4:-61354044 | Msa0992510:three_prime_UTR |
| GTTTACCTAGTATCTGGATT+TGG | 0.367101 | 6_4:-61356093 | Msa0992510:CDS |
| GAGAAGATGGGAAGTGGGTT+TGG | 0.375626 | 6_4:+61358614 | None:intergenic |
| GGAGACTTGTCTCATGCATT+TGG | 0.378901 | 6_4:-61356585 | Msa0992510:CDS |
| TCACAACAGCATCCCACTTA+AGG | 0.382515 | 6_4:+61356623 | None:intergenic |
| AGAGTGAGATATAGAGAAGA+TGG | 0.385708 | 6_4:+61358601 | None:intergenic |
| ATTGTCATCAATCTGGTGAT+TGG | 0.392947 | 6_4:-61355314 | Msa0992510:CDS |
| TTCGCCTTGAACAACAATTT+GGG | 0.400132 | 6_4:-61356504 | Msa0992510:CDS |
| AACCCTTACGTTTCAGAAGA+AGG | 0.412425 | 6_4:+61358226 | None:intergenic |
| TCGCATTTCCATTTAGAAGT+TGG | 0.417696 | 6_4:+61354213 | None:intergenic |
| ATGATCAGTCTGGTCTTCAT+TGG | 0.423207 | 6_4:-61356529 | Msa0992510:CDS |
| CTCTCGTACTATTGATTGCC+TGG | 0.425859 | 6_4:-61355115 | Msa0992510:intron |
| TGGTTTAGTGATGCTATTGC+GGG | 0.429270 | 6_4:-61354286 | Msa0992510:CDS |
| TTCCTAACAGGATTTCTCCT+TGG | 0.430146 | 6_4:-61355251 | Msa0992510:CDS |
| CGAACCCAAATTGTTGTTCA+AGG | 0.433969 | 6_4:+61356500 | None:intergenic |
| CACAACAGCATCCCACTTAA+GGG | 0.436258 | 6_4:+61356624 | None:intergenic |
| ACTCCAGTTTGTGATAAGTT+CGG | 0.447369 | 6_4:+61355981 | None:intergenic |
| CTTGAACAACAATTTGGGTT+CGG | 0.447883 | 6_4:-61356499 | Msa0992510:intron |
| ACACGCTGGAATCATTCATT+TGG | 0.450645 | 6_4:-61356560 | Msa0992510:CDS |
| TACCTAGTATCTGGATTTGG+TGG | 0.452294 | 6_4:-61356090 | Msa0992510:CDS |
| AGATTTCACTCTTCTGCAAC+CGG | 0.452910 | 6_4:+61353978 | None:intergenic |
| GATATAGAGAAGATGGGAAG+TGG | 0.458170 | 6_4:+61358608 | None:intergenic |
| GCGATGACAGTTAAACGAAT+AGG | 0.466599 | 6_4:-61354194 | Msa0992510:exon |
| GAGTGAGATATAGAGAAGAT+GGG | 0.470429 | 6_4:+61358602 | None:intergenic |
| AGAGATCTAGAGAGAGATGG+AGG | 0.474513 | 6_4:-61358490 | Msa0992510:CDS |
| GGAAGTGGGTTTGGTGAGAG+AGG | 0.480292 | 6_4:+61358623 | None:intergenic |
| TTCCCCGTCCTCAATTTGGT+TGG | 0.484649 | 6_4:-61355217 | Msa0992510:CDS |
| TTTCCGAACTTATCACAAAC+TGG | 0.485212 | 6_4:-61355984 | Msa0992510:CDS |
| TAGAAGTTGGAACACATGTC+AGG | 0.485216 | 6_4:+61354226 | None:intergenic |
| ATATAGAGAAGATGGGAAGT+GGG | 0.486608 | 6_4:+61358609 | None:intergenic |
| GGTTTACCAATATGTTCTAT+GGG | 0.487504 | 6_4:-61355144 | Msa0992510:CDS |
| ATAGCTATACATAAAAGAAC+AGG | 0.488821 | 6_4:+61354160 | None:intergenic |
| TGGAAATTTGCAGTGAGGAT+AGG | 0.489071 | 6_4:-61356120 | Msa0992510:intron |
| TTGAAAGAGAATCCTTTGCT+TGG | 0.490540 | 6_4:-61358250 | Msa0992510:CDS |
| TTGAATGGTAGGTTATCCAT+TGG | 0.492130 | 6_4:-61354306 | Msa0992510:intron |
| ACCTAGTATCTGGATTTGGT+GGG | 0.495725 | 6_4:-61356089 | Msa0992510:CDS |
| CAGAAACTAGTTGGACATCA+TGG | 0.498180 | 6_4:-61358408 | Msa0992510:CDS |
| AACCAAGGAGAAATCCTGTT+AGG | 0.498873 | 6_4:+61355249 | None:intergenic |
| AGCAAAGGATTCTCTTTCAA+AGG | 0.499402 | 6_4:+61358253 | None:intergenic |
| ATACAACCCATAGAACATAT+TGG | 0.500183 | 6_4:+61355138 | None:intergenic |
| CGAAGATGGGAGCCCTTAAG+TGG | 0.502536 | 6_4:-61356636 | Msa0992510:CDS |
| TTGAACCAATATCCAAAAGA+AGG | 0.504240 | 6_4:+61358555 | None:intergenic |
| GACTTGAGGCGAACACCAGC+AGG | 0.504828 | 6_4:+61355176 | None:intergenic |
| GTTATGATCCAGAAACTAGT+TGG | 0.521904 | 6_4:-61358417 | Msa0992510:CDS |
| GCTTGTACCTATGTTTGTTG+TGG | 0.524538 | 6_4:-61358386 | Msa0992510:CDS |
| GGCAGCAAACATGATCAGTC+TGG | 0.524653 | 6_4:-61356539 | Msa0992510:CDS |
| TTGTGAATCATCACCAAGGA+TGG | 0.525415 | 6_4:-61356606 | Msa0992510:CDS |
| AAGAGCACCGGAAGCACCAA+CGG | 0.530069 | 6_4:+61356029 | None:intergenic |
| ATGAGACAAGTCTCCATCCT+TGG | 0.532446 | 6_4:+61356593 | None:intergenic |
| GGATCATAACCACTTGAAGT+TGG | 0.535918 | 6_4:+61358430 | None:intergenic |
| GAAGTGGGTTTGGTGAGAGA+GGG | 0.537929 | 6_4:+61358624 | None:intergenic |
| GCGGATACGACCACTGCCAT+TGG | 0.539605 | 6_4:-61354257 | Msa0992510:CDS |
| AAAAGAACGACAAGATCAGC+AGG | 0.541526 | 6_4:+61358700 | None:intergenic |
| ACGACAAGATCAGCAGGTAG+TGG | 0.548594 | 6_4:+61358706 | None:intergenic |
| TCCCACCAAATCCAGATACT+AGG | 0.555103 | 6_4:+61356088 | None:intergenic |
| TCGCCTCAAGTCTAAGTACA+AGG | 0.555196 | 6_4:-61355165 | Msa0992510:CDS |
| TGTGATAAGTTCGGAAAGCA+TGG | 0.557185 | 6_4:+61355990 | None:intergenic |
| TAACCAACCAAATTGAGGAC+GGG | 0.559677 | 6_4:+61355214 | None:intergenic |
| AGGGATTGTTGAATCTGAAA+CGG | 0.568705 | 6_4:+61358643 | None:intergenic |
| GGTAGTGACACCAATGGCAG+TGG | 0.569166 | 6_4:+61354247 | None:intergenic |
| TTGGTTTAGTGATGCTATTG+CGG | 0.570398 | 6_4:-61354287 | Msa0992510:CDS |
| GCACAGCGACATGTTCCTGC+TGG | 0.570742 | 6_4:-61355191 | Msa0992510:CDS |
| AGATTAGCCACAACAAACAT+AGG | 0.571657 | 6_4:+61358379 | None:intergenic |
| TGTGCTAACCAACCAAATTG+AGG | 0.571688 | 6_4:+61355209 | None:intergenic |
| CAATAGCATCACTAAACCAA+TGG | 0.573374 | 6_4:+61354290 | None:intergenic |
| GGGAGAGATCTAGAGAGAGA+TGG | 0.574429 | 6_4:-61358493 | Msa0992510:CDS |
| TCATAACCACTTGAAGTTGG+TGG | 0.579347 | 6_4:+61358433 | None:intergenic |
| GCTGTTCCACCAACTTCAAG+TGG | 0.584755 | 6_4:-61358439 | Msa0992510:CDS |
| TCAGAAGAAGGACCAAGCAA+AGG | 0.588996 | 6_4:+61358238 | None:intergenic |
| ATGCTATTGCGGGGTGAAAG+CGG | 0.592655 | 6_4:-61354276 | Msa0992510:CDS |
| TAAAAGAACAGGAATAGCGC+AGG | 0.608845 | 6_4:+61354171 | None:intergenic |
| TCATGCATTTGGTTACACGC+TGG | 0.611101 | 6_4:-61356574 | Msa0992510:CDS |
| TGAGCAAAATTGTCGACATG+TGG | 0.620566 | 6_4:+61355284 | None:intergenic |
| AACCAAATTGAGGACGGGGA+AGG | 0.621571 | 6_4:+61355219 | None:intergenic |
| AACCAACCAAATTGAGGACG+GGG | 0.621889 | 6_4:+61355215 | None:intergenic |
| CTAACCAACCAAATTGAGGA+CGG | 0.644997 | 6_4:+61355213 | None:intergenic |
| AAACCTTGTACTTAGACTTG+AGG | 0.651465 | 6_4:+61355162 | None:intergenic |
| GGGGAAGGAAAATGAAACCA+AGG | 0.657876 | 6_4:+61355234 | None:intergenic |
| GAGATCTAGAGAGAGATGGA+GGG | 0.661813 | 6_4:-61358489 | Msa0992510:CDS |
| GAAGATGGGAGCCCTTAAGT+GGG | 0.681846 | 6_4:-61356635 | Msa0992510:CDS |
| ATGTCAGGTAGTGACACCAA+TGG | 0.701971 | 6_4:+61354241 | None:intergenic |
| GGTTTAGTGATGCTATTGCG+GGG | 0.740371 | 6_4:-61354285 | Msa0992510:CDS |
| GCTGTTGTGAATCATCACCA+AGG | 0.777652 | 6_4:-61356610 | Msa0992510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATATCATATAGATAA+AGG | - | chr6_4:61358695-61358714 | Msa0992510:five_prime_UTR | 10.0% |
| !!! | ATTTCAATAATATATTTTAC+CGG | - | chr6_4:61358742-61358761 | Msa0992510:five_prime_UTR | 10.0% |
| !!! | TATTATTCATAAGTTTGTTA+AGG | - | chr6_4:61354628-61354647 | Msa0992510:intron | 15.0% |
| !!! | AGTTAAATTGTTTTTGTATA+TGG | - | chr6_4:61354874-61354893 | Msa0992510:intron | 15.0% |
| !! | TTGATATAAAAATAAGATCA+AGG | + | chr6_4:61355949-61355968 | None:intergenic | 15.0% |
| !!! | TTATTTTTATATCAATGACT+TGG | - | chr6_4:61355954-61355973 | Msa0992510:intron | 15.0% |
| !!! | ATTTTACACAAATATAGTAA+TGG | - | chr6_4:61356491-61356510 | Msa0992510:intron | 15.0% |
| !! | TAATATCATCGTTTAATAAT+AGG | + | chr6_4:61357959-61357978 | None:intergenic | 15.0% |
| !!! | TTACAAATTGTTTCTTTTTT+TGG | - | chr6_4:61358607-61358626 | Msa0992510:five_prime_UTR | 15.0% |
| !!! | TACATATCTGCATTTTTTTT+TGG | + | chr6_4:61355272-61355291 | None:intergenic | 20.0% |
| !!! | TTATGATTTTGTTTTAGCTT+AGG | - | chr6_4:61355391-61355410 | Msa0992510:intron | 20.0% |
| !!! | TATGATTTTGTTTTAGCTTA+GGG | - | chr6_4:61355392-61355411 | Msa0992510:intron | 20.0% |
| !!! | TTAGTGAAATTTTCAGTTTT+TGG | - | chr6_4:61355582-61355601 | Msa0992510:intron | 20.0% |
| !! | AAACATGAAAAACAAAACAT+GGG | + | chr6_4:61355649-61355668 | None:intergenic | 20.0% |
| !! | AAAACATGAAAAACAAAACA+TGG | + | chr6_4:61355650-61355669 | None:intergenic | 20.0% |
| !! | TATCAAAAACTAATATGTAG+TGG | - | chr6_4:61355768-61355787 | Msa0992510:intron | 20.0% |
| !!! | TTCGATTTTGTTTAAGATTA+GGG | - | chr6_4:61355861-61355880 | Msa0992510:intron | 20.0% |
| !! | TATAAAAATAAGATCAAGGT+AGG | + | chr6_4:61355945-61355964 | None:intergenic | 20.0% |
| !! | TTTGTGTAAAATTCACTAAA+TGG | + | chr6_4:61356483-61356502 | None:intergenic | 20.0% |
| !!! | CAAATTTCCAACAAATTTTT+TGG | + | chr6_4:61356609-61356628 | None:intergenic | 20.0% |
| !! | AAGTTAACAAAAGAAAAAGT+TGG | + | chr6_4:61357066-61357085 | None:intergenic | 20.0% |
| !! | ATATGACTTGAATTATTTAG+TGG | - | chr6_4:61357120-61357139 | Msa0992510:intron | 20.0% |
| !! | ACAACTAACAACAAAATTAT+AGG | + | chr6_4:61357163-61357182 | None:intergenic | 20.0% |
| !! | AAGATGTTTAATCAAATTAG+TGG | + | chr6_4:61357296-61357315 | None:intergenic | 20.0% |
| !! | TGATTAAACATCTTATATCT+AGG | - | chr6_4:61357302-61357321 | Msa0992510:intron | 20.0% |
| !! | TCGTTTAATAATAGGAATTT+GGG | + | chr6_4:61357951-61357970 | None:intergenic | 20.0% |
| !! | ATCGTTTAATAATAGGAATT+TGG | + | chr6_4:61357952-61357971 | None:intergenic | 20.0% |
| !! | ACAATTTATAAAACCTCTAA+AGG | + | chr6_4:61358311-61358330 | None:intergenic | 20.0% |
| !! | AATTGTCATTATCTATTGTT+AGG | - | chr6_4:61358325-61358344 | Msa0992510:CDS | 20.0% |
| !! | TATCTATTGTTAGGAAAATA+AGG | - | chr6_4:61358334-61358353 | Msa0992510:CDS | 20.0% |
| !!! | ACTAATAACTGATTCTTATA+AGG | + | chr6_4:61358639-61358658 | None:intergenic | 20.0% |
| ! | AAGGAAAGTTTGGAAATTTA+TGG | + | chr6_4:61354168-61354187 | None:intergenic | 25.0% |
| ! | AATTGTCCTAGTAAAAATCT+TGG | - | chr6_4:61354414-61354433 | Msa0992510:intron | 25.0% |
| !! | TCAAAACCAAGATTTTTACT+AGG | + | chr6_4:61354423-61354442 | None:intergenic | 25.0% |
| !!! | AGTAAAAATCTTGGTTTTGA+TGG | - | chr6_4:61354423-61354442 | Msa0992510:intron | 25.0% |
| !! | TTTTTGTATATGGTATAAGC+TGG | - | chr6_4:61354884-61354903 | Msa0992510:intron | 25.0% |
| ! | TCTCTACAATATCAATAATC+AGG | + | chr6_4:61355078-61355097 | None:intergenic | 25.0% |
| ! | CATAAAATACAATTATGTCG+TGG | - | chr6_4:61355325-61355344 | Msa0992510:CDS | 25.0% |
| !!! | ATGATTTTGTTTTAGCTTAG+GGG | - | chr6_4:61355393-61355412 | Msa0992510:intron | 25.0% |
| ! | ATTAACATAAAAACCAGATC+AGG | + | chr6_4:61355485-61355504 | None:intergenic | 25.0% |
| ! | AATGTTATAGTACTTTGACT+TGG | - | chr6_4:61355502-61355521 | Msa0992510:intron | 25.0% |
| ! | ACTAAACAGGGTTTAAATAA+AGG | + | chr6_4:61355813-61355832 | None:intergenic | 25.0% |
| ! | CTAATCTTAAACAAAATCGA+AGG | + | chr6_4:61355862-61355881 | None:intergenic | 25.0% |
| !!! | CTTCGATTTTGTTTAAGATT+AGG | - | chr6_4:61355860-61355879 | Msa0992510:intron | 25.0% |
| !!! | TCGATTTTGTTTAAGATTAG+GGG | - | chr6_4:61355862-61355881 | Msa0992510:intron | 25.0% |
| !! | GAGTTACATGAAAATTTGTT+TGG | - | chr6_4:61355885-61355904 | Msa0992510:intron | 25.0% |
| ! | ATGTCAAATATCATCTATAG+TGG | + | chr6_4:61356372-61356391 | None:intergenic | 25.0% |
| ! | TTGTATTAAATAGCGTATTG+CGG | - | chr6_4:61356396-61356415 | Msa0992510:intron | 25.0% |
| ! | ATTAACTACACTCACTTTAT+TGG | + | chr6_4:61356791-61356810 | None:intergenic | 25.0% |
| ! | ATTGACAAAAGAAAAAGGAT+TGG | + | chr6_4:61357096-61357115 | None:intergenic | 25.0% |
| ! | TGTCAATTGACAAAAGAAAA+AGG | + | chr6_4:61357101-61357120 | None:intergenic | 25.0% |
| ! | CTTATTGACAATGTATCTTA+TGG | - | chr6_4:61357206-61357225 | Msa0992510:intron | 25.0% |
| ! | GTTTATTATTGTCATCAATC+TGG | - | chr6_4:61357418-61357437 | Msa0992510:intron | 25.0% |
| ! | TTAATAATAGGAATTTGGGA+CGG | + | chr6_4:61357947-61357966 | None:intergenic | 25.0% |
| ! | ACCACATGTTAGTTAAATAA+AGG | - | chr6_4:61358199-61358218 | Msa0992510:intron | 25.0% |
| !! | TCCTTTATTTAACTAACATG+TGG | + | chr6_4:61358203-61358222 | None:intergenic | 25.0% |
| ! | AATTTAAATGTGACCTTTAG+AGG | - | chr6_4:61358295-61358314 | Msa0992510:CDS | 25.0% |
| ! | ATAGCTATACATAAAAGAAC+AGG | + | chr6_4:61358582-61358601 | None:intergenic | 25.0% |
| !!! | ATCAGTTATTAGTTTGTCTT+TGG | - | chr6_4:61358646-61358665 | Msa0992510:five_prime_UTR | 25.0% |
| !! | GATTTTATGTGTATTTTGTG+TGG | - | chr6_4:61358668-61358687 | Msa0992510:five_prime_UTR | 25.0% |
| ! | TTTCCAAACTTTCCTTCTTT+TGG | - | chr6_4:61354172-61354191 | Msa0992510:three_prime_UTR | 30.0% |
| TATCCAAAAGAAGGAAAGTT+TGG | + | chr6_4:61354178-61354197 | None:intergenic | 30.0% | |
| ! | ACTTTCCTTCTTTTGGATAT+TGG | - | chr6_4:61354179-61354198 | Msa0992510:three_prime_UTR | 30.0% |
| TTGAACCAATATCCAAAAGA+AGG | + | chr6_4:61354187-61354206 | None:intergenic | 30.0% | |
| AGAGAAAAAGAAACATGTCT+GGG | - | chr6_4:61354226-61354245 | Msa0992510:CDS | 30.0% | |
| !!! | CTTGTGTTTTGAAGTTTCTT+GGG | - | chr6_4:61354448-61354467 | Msa0992510:intron | 30.0% |
| AAAAATGAGTCAATCCAATC+AGG | - | chr6_4:61354747-61354766 | Msa0992510:intron | 30.0% | |
| AGCAATACCAAAATCATCAA+AGG | + | chr6_4:61354774-61354793 | None:intergenic | 30.0% | |
| !! | ATGATTTTGGTATTGCTTTC+AGG | - | chr6_4:61354777-61354796 | Msa0992510:intron | 30.0% |
| ATAAGCTGTTTATCCAAACA+GGG | + | chr6_4:61354803-61354822 | None:intergenic | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | + | chr6_4:61354804-61354823 | None:intergenic | 30.0% | |
| AACAGCTTATTTGTAGCTTA+AGG | - | chr6_4:61354813-61354832 | Msa0992510:intron | 30.0% | |
| ACACAAATAAGAATCCATAC+AGG | - | chr6_4:61355026-61355045 | Msa0992510:intron | 30.0% | |
| ! | CTAAACCAGACAAATTTTCA+TGG | + | chr6_4:61355424-61355443 | None:intergenic | 30.0% |
| ! | ATTTGTCTGGTTTAGTGAAT+TGG | - | chr6_4:61355429-61355448 | Msa0992510:intron | 30.0% |
| TGGTTTAGTGAATTGGATTT+GGG | - | chr6_4:61355436-61355455 | Msa0992510:intron | 30.0% | |
| GCATGATTATCTACTAAACA+GGG | + | chr6_4:61355825-61355844 | None:intergenic | 30.0% | |
| TGCATGATTATCTACTAAAC+AGG | + | chr6_4:61355826-61355845 | None:intergenic | 30.0% | |
| !! | CGATTTTGTTTAAGATTAGG+GGG | - | chr6_4:61355863-61355882 | Msa0992510:intron | 30.0% |
| ! | ATTTGTTTGGTTCAGTGAAT+TGG | - | chr6_4:61355898-61355917 | Msa0992510:intron | 30.0% |
| TCAGATATGAGTATCTAAAC+AGG | + | chr6_4:61355981-61356000 | None:intergenic | 30.0% | |
| !! | TTTTTGAAGACTAACGAAGA+TGG | - | chr6_4:61356089-61356108 | Msa0992510:CDS | 30.0% |
| !! | TTTTGAAGACTAACGAAGAT+GGG | - | chr6_4:61356090-61356109 | Msa0992510:CDS | 30.0% |
| CTTGTACACATAAATTCATC+AGG | + | chr6_4:61356565-61356584 | None:intergenic | 30.0% | |
| GTTGTGACCAAAAAATTTGT+TGG | - | chr6_4:61356599-61356618 | Msa0992510:CDS | 30.0% | |
| GAGATTCATCATAGTGAATT+GGG | + | chr6_4:61357005-61357024 | None:intergenic | 30.0% | |
| AACTTTGAGTATCAGAGAAA+TGG | + | chr6_4:61357264-61357283 | None:intergenic | 30.0% | |
| TTTGATTCTGTACACTATAG+TGG | - | chr6_4:61357330-61357349 | Msa0992510:intron | 30.0% | |
| TTGATTCTGTACACTATAGT+GGG | - | chr6_4:61357331-61357350 | Msa0992510:intron | 30.0% | |
| ACCTACAAGATACAGAAAAA+CGG | + | chr6_4:61357377-61357396 | None:intergenic | 30.0% | |
| ! | TCGACAATTTTGCTCATATT+GGG | - | chr6_4:61357462-61357481 | Msa0992510:intron | 30.0% |
| AGGTTTACCAATATGTTCTA+TGG | - | chr6_4:61357594-61357613 | Msa0992510:intron | 30.0% | |
| GGTTTACCAATATGTTCTAT+GGG | - | chr6_4:61357595-61357614 | Msa0992510:intron | 30.0% | |
| ATACAACCCATAGAACATAT+TGG | + | chr6_4:61357604-61357623 | None:intergenic | 30.0% | |
| TAACAGTTATGTTGCTAATG+AGG | + | chr6_4:61357668-61357687 | None:intergenic | 30.0% | |
| TCATTAGCAACATAACTGTT+AGG | - | chr6_4:61357667-61357686 | Msa0992510:intron | 30.0% | |
| CATTAGCAACATAACTGTTA+GGG | - | chr6_4:61357668-61357687 | Msa0992510:intron | 30.0% | |
| TCATGAATAGTCCTAAACAA+GGG | + | chr6_4:61357745-61357764 | None:intergenic | 30.0% | |
| ATCATGAATAGTCCTAAACA+AGG | + | chr6_4:61357746-61357765 | None:intergenic | 30.0% | |
| ! | CTTTTACCAAACTGTTGTAA+TGG | + | chr6_4:61357797-61357816 | None:intergenic | 30.0% |
| ACCCGAATTGTATAAAAGTT+CGG | - | chr6_4:61357846-61357865 | Msa0992510:intron | 30.0% | |
| ! | ACCGAACTTTTATACAATTC+GGG | + | chr6_4:61357850-61357869 | None:intergenic | 30.0% |
| ! | CACCGAACTTTTATACAATT+CGG | + | chr6_4:61357851-61357870 | None:intergenic | 30.0% |
| CTAATATTCAGTCAAGTGTT+TGG | + | chr6_4:61357985-61358004 | None:intergenic | 30.0% | |
| CAAACACTTGACTGAATATT+AGG | - | chr6_4:61357983-61358002 | Msa0992510:intron | 30.0% | |
| ! | CTTCACAGTTTGATTCTTTT+CGG | + | chr6_4:61358036-61358055 | None:intergenic | 30.0% |
| CTATTGTTAGGAAAATAAGG+TGG | - | chr6_4:61358337-61358356 | Msa0992510:CDS | 30.0% | |
| AGGGATTGTTGAATCTGAAA+CGG | + | chr6_4:61354099-61354118 | None:intergenic | 35.0% | |
| ATATAGAGAAGATGGGAAGT+GGG | + | chr6_4:61354133-61354152 | None:intergenic | 35.0% | |
| GAGTGAGATATAGAGAAGAT+GGG | + | chr6_4:61354140-61354159 | None:intergenic | 35.0% | |
| AGAGTGAGATATAGAGAAGA+TGG | + | chr6_4:61354141-61354160 | None:intergenic | 35.0% | |
| GAGAGAAAAAGAAACATGTC+TGG | - | chr6_4:61354225-61354244 | Msa0992510:CDS | 35.0% | |
| GTTATGATCCAGAAACTAGT+TGG | - | chr6_4:61354322-61354341 | Msa0992510:intron | 35.0% | |
| ! | AGATTAGCCACAACAAACAT+AGG | + | chr6_4:61354363-61354382 | None:intergenic | 35.0% |
| !!! | GCTTGTGTTTTGAAGTTTCT+TGG | - | chr6_4:61354447-61354466 | Msa0992510:intron | 35.0% |
| AGCAAAGGATTCTCTTTCAA+AGG | + | chr6_4:61354489-61354508 | None:intergenic | 35.0% | |
| TTGAAAGAGAATCCTTTGCT+TGG | - | chr6_4:61354489-61354508 | Msa0992510:intron | 35.0% | |
| AAATCATCAAAGGACCTGAT+TGG | + | chr6_4:61354764-61354783 | None:intergenic | 35.0% | |
| !! | ATCAGGTCCTTTGATGATTT+TGG | - | chr6_4:61354764-61354783 | Msa0992510:intron | 35.0% |
| TATTTGTAGCTTAAGGCACA+AGG | - | chr6_4:61354820-61354839 | Msa0992510:intron | 35.0% | |
| ATTTGTAGCTTAAGGCACAA+GGG | - | chr6_4:61354821-61354840 | Msa0992510:intron | 35.0% | |
| ATAAATTAGCCCACCTAAAC+TGG | + | chr6_4:61355214-61355233 | None:intergenic | 35.0% | |
| !! | TTTAGGTGGGCTAATTTATC+CGG | - | chr6_4:61355215-61355234 | Msa0992510:CDS | 35.0% |
| ATAAATTAGCCCACCTAAAC+TGG | + | chr6_4:61355214-61355233 | None:intergenic | 35.0% | |
| !!! | ATTTTGTTTTAGCTTAGGGG+TGG | - | chr6_4:61355396-61355415 | Msa0992510:intron | 35.0% |
| TGGTTCCATGAAAATTTGTC+TGG | - | chr6_4:61355416-61355435 | Msa0992510:intron | 35.0% | |
| CTGGTTTAGTGAATTGGATT+TGG | - | chr6_4:61355435-61355454 | Msa0992510:intron | 35.0% | |
| GGTTTAGTGAATTGGATTTG+GGG | - | chr6_4:61355437-61355456 | Msa0992510:intron | 35.0% | |
| GTTTAGTGAATTGGATTTGG+GGG | - | chr6_4:61355438-61355457 | Msa0992510:intron | 35.0% | |
| ! | CTTTTAGTCGAAAACTGTCA+TGG | - | chr6_4:61355720-61355739 | Msa0992510:intron | 35.0% |
| TTGGTTCAGTGAATTGGATA+TGG | - | chr6_4:61355904-61355923 | Msa0992510:intron | 35.0% | |
| TGGTTCAGTGAATTGGATAT+GGG | - | chr6_4:61355905-61355924 | Msa0992510:intron | 35.0% | |
| TAGTACGGTAGCATAGATTT+AGG | - | chr6_4:61356031-61356050 | Msa0992510:CDS | 35.0% | |
| ATTCGCCTTGAACAACAATT+TGG | - | chr6_4:61356234-61356253 | Msa0992510:intron | 35.0% | |
| TTCGCCTTGAACAACAATTT+GGG | - | chr6_4:61356235-61356254 | Msa0992510:intron | 35.0% | |
| ! | CTTGAACAACAATTTGGGTT+CGG | - | chr6_4:61356240-61356259 | Msa0992510:intron | 35.0% |
| TTTGTTGGAAATTTGCAGTG+AGG | - | chr6_4:61356614-61356633 | Msa0992510:CDS | 35.0% | |
| GTTTACCTAGTATCTGGATT+TGG | - | chr6_4:61356646-61356665 | Msa0992510:intron | 35.0% | |
| !! | ATTAGAAAAAGCATCTCCGT+TGG | - | chr6_4:61356694-61356713 | Msa0992510:intron | 35.0% |
| TTTCCGAACTTATCACAAAC+TGG | - | chr6_4:61356755-61356774 | Msa0992510:intron | 35.0% | |
| ACTCCAGTTTGTGATAAGTT+CGG | + | chr6_4:61356761-61356780 | None:intergenic | 35.0% | |
| !! | ATCAGATACTCGTATCGATT+GGG | + | chr6_4:61356945-61356964 | None:intergenic | 35.0% |
| GTATCTGATGTGTATCATTC+TGG | - | chr6_4:61356956-61356975 | Msa0992510:intron | 35.0% | |
| CGAGATTCATCATAGTGAAT+TGG | + | chr6_4:61357006-61357025 | None:intergenic | 35.0% | |
| GAGAAATGGTTATCGAATCA+CGG | + | chr6_4:61357250-61357269 | None:intergenic | 35.0% | |
| !! | ACCGTTTTTCTGTATCTTGT+AGG | - | chr6_4:61357373-61357392 | Msa0992510:intron | 35.0% |
| ATTGTCATCAATCTGGTGAT+TGG | - | chr6_4:61357425-61357444 | Msa0992510:intron | 35.0% | |
| ! | GTCGACAATTTTGCTCATAT+TGG | - | chr6_4:61357461-61357480 | Msa0992510:intron | 35.0% |
| ! | CGACAATTTTGCTCATATTG+GGG | - | chr6_4:61357463-61357482 | Msa0992510:intron | 35.0% |
| ! | GACAATTTTGCTCATATTGG+GGG | - | chr6_4:61357464-61357483 | Msa0992510:intron | 35.0% |
| AAACCTTGTACTTAGACTTG+AGG | + | chr6_4:61357580-61357599 | None:intergenic | 35.0% | |
| ! | TAAACCAGTAACCCTTGTTT+AGG | - | chr6_4:61357731-61357750 | Msa0992510:intron | 35.0% |
| GACTATTCATGATTCGTTTC+AGG | - | chr6_4:61357753-61357772 | Msa0992510:intron | 35.0% | |
| ! | ATTCATGATTCGTTTCAGGT+AGG | - | chr6_4:61357757-61357776 | Msa0992510:intron | 35.0% |
| ACTGTTGTAATGGTTCAGTT+TGG | + | chr6_4:61357787-61357806 | None:intergenic | 35.0% | |
| ACTGAACCATTACAACAGTT+TGG | - | chr6_4:61357788-61357807 | Msa0992510:intron | 35.0% | |
| GGTAAAAGCTGAACTGTTAA+TGG | - | chr6_4:61357809-61357828 | Msa0992510:intron | 35.0% | |
| ! | AAAGTAGTTCAGGTTAGGTT+CGG | + | chr6_4:61357890-61357909 | None:intergenic | 35.0% |
| ! | CAGTAAAAGTAGTTCAGGTT+AGG | + | chr6_4:61357895-61357914 | None:intergenic | 35.0% |
| GTTAGCAGTAAAAGTAGTTC+AGG | + | chr6_4:61357900-61357919 | None:intergenic | 35.0% | |
| CGAAAAGAATCAAACTGTGA+AGG | - | chr6_4:61358034-61358053 | Msa0992510:intron | 35.0% | |
| !!! | TTCACGAGTTCAGTTTTGTT+CGG | + | chr6_4:61358070-61358089 | None:intergenic | 35.0% |
| CTAAACTGACTAAACTGTGA+CGG | + | chr6_4:61358096-61358115 | None:intergenic | 35.0% | |
| !! | TCAGTTTAGTCTTTTCAGTG+CGG | - | chr6_4:61358107-61358126 | Msa0992510:intron | 35.0% |
| ! | TGGTTTAACGGTTCAGTTTT+TGG | - | chr6_4:61358132-61358151 | Msa0992510:intron | 35.0% |
| ! | CACTGTATTCGTTTGTTGAA+TGG | - | chr6_4:61358418-61358437 | Msa0992510:CDS | 35.0% |
| ! | GTATTCGTTTGTTGAATGGT+AGG | - | chr6_4:61358422-61358441 | Msa0992510:CDS | 35.0% |
| TTGAATGGTAGGTTATCCAT+TGG | - | chr6_4:61358433-61358452 | Msa0992510:CDS | 35.0% | |
| CAATAGCATCACTAAACCAA+TGG | + | chr6_4:61358452-61358471 | None:intergenic | 35.0% | |
| TTGGTTTAGTGATGCTATTG+CGG | - | chr6_4:61358452-61358471 | Msa0992510:CDS | 35.0% | |
| CATGTGTTCCAACTTCTAAA+TGG | - | chr6_4:61358518-61358537 | Msa0992510:exon | 35.0% | |
| TCGCATTTCCATTTAGAAGT+TGG | + | chr6_4:61358529-61358548 | None:intergenic | 35.0% | |
| AAAAGAACGACAAGATCAGC+AGG | + | chr6_4:61354042-61354061 | None:intergenic | 40.0% | |
| GATATAGAGAAGATGGGAAG+TGG | + | chr6_4:61354134-61354153 | None:intergenic | 40.0% | |
| TCATAACCACTTGAAGTTGG+TGG | + | chr6_4:61354309-61354328 | None:intergenic | 40.0% | |
| GGATCATAACCACTTGAAGT+TGG | + | chr6_4:61354312-61354331 | None:intergenic | 40.0% | |
| ! | CATGATGTCCAACTAGTTTC+TGG | + | chr6_4:61354333-61354352 | None:intergenic | 40.0% |
| CAGAAACTAGTTGGACATCA+TGG | - | chr6_4:61354331-61354350 | Msa0992510:intron | 40.0% | |
| ! | GCTTGTACCTATGTTTGTTG+TGG | - | chr6_4:61354353-61354372 | Msa0992510:intron | 40.0% |
| !! | GTCCTTCTTCTGAAACGTAA+GGG | - | chr6_4:61354511-61354530 | Msa0992510:intron | 40.0% |
| AACCCTTACGTTTCAGAAGA+AGG | + | chr6_4:61354516-61354535 | None:intergenic | 40.0% | |
| AAGAATCCATACAGGCTAGT+TGG | - | chr6_4:61355034-61355053 | Msa0992510:intron | 40.0% | |
| AGATATGTAGCTAACCCACT+TGG | - | chr6_4:61355113-61355132 | Msa0992510:intron | 40.0% | |
| GATATGTAGCTAACCCACTT+GGG | - | chr6_4:61355114-61355133 | Msa0992510:intron | 40.0% | |
| ! | AATTTATCCGGTGCCAGTTT+AGG | - | chr6_4:61355227-61355246 | Msa0992510:CDS | 40.0% |
| TGTCATGGCAGTCTTAAATG+TGG | - | chr6_4:61355735-61355754 | Msa0992510:intron | 40.0% | |
| !! | AAATCGAAGGCACTTCTACT+AGG | + | chr6_4:61355849-61355868 | None:intergenic | 40.0% |
| GGTTCAGTGAATTGGATATG+GGG | - | chr6_4:61355906-61355925 | Msa0992510:intron | 40.0% | |
| GCCTGAATTCTTGTGTAGTA+CGG | - | chr6_4:61356016-61356035 | Msa0992510:CDS | 40.0% | |
| ACCGTACTACACAAGAATTC+AGG | + | chr6_4:61356020-61356039 | None:intergenic | 40.0% | |
| TTGTGAATCATCACCAAGGA+TGG | - | chr6_4:61356133-61356152 | Msa0992510:intron | 40.0% | |
| ACACGCTGGAATCATTCATT+TGG | - | chr6_4:61356179-61356198 | Msa0992510:intron | 40.0% | |
| ! | ATGATCAGTCTGGTCTTCAT+TGG | - | chr6_4:61356210-61356229 | Msa0992510:intron | 40.0% |
| ! | CGAACCCAAATTGTTGTTCA+AGG | + | chr6_4:61356242-61356261 | None:intergenic | 40.0% |
| CCTTTCAGTGTCGTCAATTA+CGG | - | chr6_4:61356301-61356320 | Msa0992510:intron | 40.0% | |
| TTACGGATCGGTGAAAATAG+CGG | - | chr6_4:61356318-61356337 | Msa0992510:intron | 40.0% | |
| ATAGTGGCACTAAAGTGTAG+CGG | + | chr6_4:61356356-61356375 | None:intergenic | 40.0% | |
| GGTAAATAAGCTTTGCAGAC+AGG | + | chr6_4:61356544-61356563 | None:intergenic | 40.0% | |
| TGGAAATTTGCAGTGAGGAT+AGG | - | chr6_4:61356619-61356638 | Msa0992510:CDS | 40.0% | |
| GGAATCGTTTACCTAGTATC+TGG | - | chr6_4:61356640-61356659 | Msa0992510:CDS | 40.0% | |
| TACCTAGTATCTGGATTTGG+TGG | - | chr6_4:61356649-61356668 | Msa0992510:intron | 40.0% | |
| ! | ACCTAGTATCTGGATTTGGT+GGG | - | chr6_4:61356650-61356669 | Msa0992510:intron | 40.0% |
| ! | AAGAAGTCCAAAAAGAGCAC+CGG | + | chr6_4:61356725-61356744 | None:intergenic | 40.0% |
| TGTGATAAGTTCGGAAAGCA+TGG | + | chr6_4:61356752-61356771 | None:intergenic | 40.0% | |
| CAGAGAGCGATAATTAGACA+TGG | + | chr6_4:61356829-61356848 | None:intergenic | 40.0% | |
| ! | CATCAGATACTCGTATCGAT+TGG | + | chr6_4:61356946-61356965 | None:intergenic | 40.0% |
| TGAGCAAAATTGTCGACATG+TGG | + | chr6_4:61357458-61357477 | None:intergenic | 40.0% | |
| TTCCTAACAGGATTTCTCCT+TGG | - | chr6_4:61357488-61357507 | Msa0992510:intron | 40.0% | |
| AACCAAGGAGAAATCCTGTT+AGG | + | chr6_4:61357493-61357512 | None:intergenic | 40.0% | |
| TAACCAACCAAATTGAGGAC+GGG | + | chr6_4:61357528-61357547 | None:intergenic | 40.0% | |
| CTAACCAACCAAATTGAGGA+CGG | + | chr6_4:61357529-61357548 | None:intergenic | 40.0% | |
| TGTGCTAACCAACCAAATTG+AGG | + | chr6_4:61357533-61357552 | None:intergenic | 40.0% | |
| ATTCGAGAAAGGAACTTACC+AGG | + | chr6_4:61357645-61357664 | None:intergenic | 40.0% | |
| TGCTAATGAGGATTCGAGAA+AGG | + | chr6_4:61357656-61357675 | None:intergenic | 40.0% | |
| !! | AGCCTTGTTCAGTAAAGTAG+AGG | - | chr6_4:61357694-61357713 | Msa0992510:intron | 40.0% |
| ! | GCCTTGTTCAGTAAAGTAGA+GGG | - | chr6_4:61357695-61357714 | Msa0992510:intron | 40.0% |
| TCCCTCTACTTTACTGAACA+AGG | + | chr6_4:61357699-61357718 | None:intergenic | 40.0% | |
| TTGTTCAGTAAAGTAGAGGG+AGG | - | chr6_4:61357698-61357717 | Msa0992510:intron | 40.0% | |
| TGTTCAGTAAAGTAGAGGGA+GGG | - | chr6_4:61357699-61357718 | Msa0992510:intron | 40.0% | |
| TAGTCCTAAACAAGGGTTAC+TGG | + | chr6_4:61357738-61357757 | None:intergenic | 40.0% | |
| !! | TGTATAAAAGTTCGGTGCAC+CGG | - | chr6_4:61357854-61357873 | Msa0992510:intron | 40.0% |
| !! | TTAGTCTTTTCAGTGCGGTT+TGG | - | chr6_4:61358112-61358131 | Msa0992510:intron | 40.0% |
| !! | TTCAGTGCGGTTTGGTTTAA+CGG | - | chr6_4:61358120-61358139 | Msa0992510:intron | 40.0% |
| TGGTTTAGTGATGCTATTGC+GGG | - | chr6_4:61358453-61358472 | Msa0992510:CDS | 40.0% | |
| TAGAAGTTGGAACACATGTC+AGG | + | chr6_4:61358516-61358535 | None:intergenic | 40.0% | |
| GCGATGACAGTTAAACGAAT+AGG | - | chr6_4:61358545-61358564 | Msa0992510:five_prime_UTR | 40.0% | |
| TAAAAGAACAGGAATAGCGC+AGG | + | chr6_4:61358571-61358590 | None:intergenic | 40.0% | |
| AGAGATCTAGAGAGAGATGG+AGG | - | chr6_4:61354249-61354268 | Msa0992510:CDS | 45.0% | |
| GAGATCTAGAGAGAGATGGA+GGG | - | chr6_4:61354250-61354269 | Msa0992510:CDS | 45.0% | |
| TCAGAAGAAGGACCAAGCAA+AGG | + | chr6_4:61354504-61354523 | None:intergenic | 45.0% | |
| !! | GGTCCTTCTTCTGAAACGTA+AGG | - | chr6_4:61354510-61354529 | Msa0992510:intron | 45.0% |
| TATTGCTTTCAGGCCCTGTT+TGG | - | chr6_4:61354787-61354806 | Msa0992510:intron | 45.0% | |
| ! | GCTGGTTTCGTAAGCTATCA+TGG | - | chr6_4:61354902-61354921 | Msa0992510:intron | 45.0% |
| ! | TGGTTTCCAACTAGCCTGTA+TGG | + | chr6_4:61355043-61355062 | None:intergenic | 45.0% |
| GTTGGAAACCATCATAGCTG+CGG | - | chr6_4:61355052-61355071 | Msa0992510:intron | 45.0% | |
| GATCACAAGCCAATACCACT+AGG | + | chr6_4:61355144-61355163 | None:intergenic | 45.0% | |
| !! | AGTGGTATTGGCTTGTGATC+TGG | - | chr6_4:61355144-61355163 | Msa0992510:CDS | 45.0% |
| !! | GTGGTATTGGCTTGTGATCT+GGG | - | chr6_4:61355145-61355164 | Msa0992510:CDS | 45.0% |
| CTATAATTGCAATCGCGCTC+TGG | - | chr6_4:61355293-61355312 | Msa0992510:CDS | 45.0% | |
| ATATGTAGTGGCCAAGATCG+CGG | - | chr6_4:61355780-61355799 | Msa0992510:intron | 45.0% | |
| CACAACAGCATCCCACTTAA+GGG | + | chr6_4:61356118-61356137 | None:intergenic | 45.0% | |
| TCACAACAGCATCCCACTTA+AGG | + | chr6_4:61356119-61356138 | None:intergenic | 45.0% | |
| GCTGTTGTGAATCATCACCA+AGG | - | chr6_4:61356129-61356148 | Msa0992510:intron | 45.0% | |
| ATGAGACAAGTCTCCATCCT+TGG | + | chr6_4:61356149-61356168 | None:intergenic | 45.0% | |
| GGAGACTTGTCTCATGCATT+TGG | - | chr6_4:61356154-61356173 | Msa0992510:intron | 45.0% | |
| TCATGCATTTGGTTACACGC+TGG | - | chr6_4:61356165-61356184 | Msa0992510:intron | 45.0% | |
| CCGTAATTGACGACACTGAA+AGG | + | chr6_4:61356304-61356323 | None:intergenic | 45.0% | |
| CAGTGTCGTCAATTACGGAT+CGG | - | chr6_4:61356306-61356325 | Msa0992510:intron | 45.0% | |
| ATAGCGAGGCTATAGTGAAG+CGG | + | chr6_4:61356445-61356464 | None:intergenic | 45.0% | |
| ACCAGTGTTGTCAAATAGCG+AGG | + | chr6_4:61356459-61356478 | None:intergenic | 45.0% | |
| TCCCACCAAATCCAGATACT+AGG | + | chr6_4:61356654-61356673 | None:intergenic | 45.0% | |
| ! | GGTGCTCTTTTTGGACTTCT+TGG | - | chr6_4:61356724-61356743 | Msa0992510:intron | 45.0% |
| CATATTGGGGGATTCCTAAC+AGG | - | chr6_4:61357476-61357495 | Msa0992510:intron | 45.0% | |
| GGGGAAGGAAAATGAAACCA+AGG | + | chr6_4:61357508-61357527 | None:intergenic | 45.0% | |
| AACCAACCAAATTGAGGACG+GGG | + | chr6_4:61357527-61357546 | None:intergenic | 45.0% | |
| TCGCCTCAAGTCTAAGTACA+AGG | - | chr6_4:61357574-61357593 | Msa0992510:intron | 45.0% | |
| ! | CTCTCGTACTATTGATTGCC+TGG | - | chr6_4:61357624-61357643 | Msa0992510:intron | 45.0% |
| TAGGTTCGGAAACACAGAAC+CGG | + | chr6_4:61357876-61357895 | None:intergenic | 45.0% | |
| TGGGACGGTTCAGTTCAAAA+AGG | + | chr6_4:61357932-61357951 | None:intergenic | 45.0% | |
| ACTCGCGTTATAACACGAGT+TGG | + | chr6_4:61358168-61358187 | None:intergenic | 45.0% | |
| GGTTTAGTGATGCTATTGCG+GGG | - | chr6_4:61358454-61358473 | Msa0992510:CDS | 45.0% | |
| ATGTCAGGTAGTGACACCAA+TGG | + | chr6_4:61358501-61358520 | None:intergenic | 45.0% | |
| ACGACAAGATCAGCAGGTAG+TGG | + | chr6_4:61354036-61354055 | None:intergenic | 50.0% | |
| !! | GAAGTGGGTTTGGTGAGAGA+GGG | + | chr6_4:61354118-61354137 | None:intergenic | 50.0% |
| ! | GAGAAGATGGGAAGTGGGTT+TGG | + | chr6_4:61354128-61354147 | None:intergenic | 50.0% |
| GGGAGAGATCTAGAGAGAGA+TGG | - | chr6_4:61354246-61354265 | Msa0992510:CDS | 50.0% | |
| GCTGTTCCACCAACTTCAAG+TGG | - | chr6_4:61354300-61354319 | Msa0992510:intron | 50.0% | |
| TAATCAGGCCGCAGCTATGA+TGG | + | chr6_4:61355063-61355082 | None:intergenic | 50.0% | |
| TGTAGCTAACCCACTTGGGT+TGG | - | chr6_4:61355118-61355137 | Msa0992510:CDS | 50.0% | |
| !! | TTGGGTTGGCCTAGTGGTAT+TGG | - | chr6_4:61355132-61355151 | Msa0992510:CDS | 50.0% |
| GAATCGAACCTGAGACCTCA+AGG | + | chr6_4:61355182-61355201 | None:intergenic | 50.0% | |
| GTCTCAGGTTCGATTCTCTC+CGG | - | chr6_4:61355186-61355205 | Msa0992510:CDS | 50.0% | |
| ! | ATTCTCTCCGGTGCCAGTTT+AGG | - | chr6_4:61355198-61355217 | Msa0992510:CDS | 50.0% |
| ! | TTATCCGGTGCCAGTTTAGG+TGG | - | chr6_4:61355230-61355249 | Msa0992510:CDS | 50.0% |
| ! | TATCCGGTGCCAGTTTAGGT+GGG | - | chr6_4:61355231-61355250 | Msa0992510:CDS | 50.0% |
| CAATTATGTCGTGGCCCAGA+TGG | - | chr6_4:61355334-61355353 | Msa0992510:CDS | 50.0% | |
| GGACTGAACCAGGAAAAACC+AGG | + | chr6_4:61355464-61355483 | None:intergenic | 50.0% | |
| TTCCTGGTTCAGTCCTGATC+TGG | - | chr6_4:61355469-61355488 | Msa0992510:intron | 50.0% | |
| AACCAGATCAGGACTGAACC+AGG | + | chr6_4:61355474-61355493 | None:intergenic | 50.0% | |
| GAAGATGGGAGCCCTTAAGT+GGG | - | chr6_4:61356104-61356123 | Msa0992510:CDS | 50.0% | |
| GGCAGCAAACATGATCAGTC+TGG | - | chr6_4:61356200-61356219 | Msa0992510:intron | 50.0% | |
| GCCTCGCTATTTGACAACAC+TGG | - | chr6_4:61356455-61356474 | Msa0992510:intron | 50.0% | |
| TTCCTTCCCCGTCCTCAATT+TGG | - | chr6_4:61357518-61357537 | Msa0992510:intron | 50.0% | |
| AACCAAATTGAGGACGGGGA+AGG | + | chr6_4:61357523-61357542 | None:intergenic | 50.0% | |
| TTCCCCGTCCTCAATTTGGT+TGG | - | chr6_4:61357522-61357541 | Msa0992510:intron | 50.0% | |
| ATGCTATTGCGGGGTGAAAG+CGG | - | chr6_4:61358463-61358482 | Msa0992510:CDS | 50.0% | |
| !! | GGAAGTGGGTTTGGTGAGAG+AGG | + | chr6_4:61354119-61354138 | None:intergenic | 55.0% |
| ACCACTAGGCCAACCCAAGT+GGG | + | chr6_4:61355130-61355149 | None:intergenic | 55.0% | |
| TACCACTAGGCCAACCCAAG+TGG | + | chr6_4:61355131-61355150 | None:intergenic | 55.0% | |
| TCGAACCTGAGACCTCAAGG+AGG | + | chr6_4:61355179-61355198 | None:intergenic | 55.0% | |
| ! | TCTCCGGTGCCAGTTTAGGT+GGG | - | chr6_4:61355202-61355221 | Msa0992510:CDS | 55.0% |
| TAGCCCACCTAAACTGGCAC+CGG | + | chr6_4:61355208-61355227 | None:intergenic | 55.0% | |
| TAGCCCACCTAAACTGGCAC+CGG | + | chr6_4:61355208-61355227 | None:intergenic | 55.0% | |
| TTATGTCGTGGCCCAGATGG+CGG | - | chr6_4:61355337-61355356 | Msa0992510:CDS | 55.0% | |
| AACGTTCGCAACCGCCATCT+GGG | + | chr6_4:61355368-61355387 | None:intergenic | 55.0% | |
| AAACGTTCGCAACCGCCATC+TGG | + | chr6_4:61355369-61355388 | None:intergenic | 55.0% | |
| GTGAATTGGATTTGGGGGCC+TGG | - | chr6_4:61355443-61355462 | Msa0992510:intron | 55.0% | |
| !! | TTTGGGGGCCTGGTTTTTCC+TGG | - | chr6_4:61355453-61355472 | Msa0992510:intron | 55.0% |
| AAGGTCAGCAACCGCGATCT+TGG | + | chr6_4:61355794-61355813 | None:intergenic | 55.0% | |
| CGAAGATGGGAGCCCTTAAG+TGG | - | chr6_4:61356103-61356122 | Msa0992510:CDS | 55.0% | |
| ! | AGCATCTCCGTTGGTGCTTC+CGG | - | chr6_4:61356703-61356722 | Msa0992510:intron | 55.0% |
| !! | AAGAGCACCGGAAGCACCAA+CGG | + | chr6_4:61356713-61356732 | None:intergenic | 55.0% |
| ! | GGTGCTTCCGGTGCTCTTTT+TGG | - | chr6_4:61356715-61356734 | Msa0992510:intron | 55.0% |
| GGTAGTGACACCAATGGCAG+TGG | + | chr6_4:61358495-61358514 | None:intergenic | 55.0% | |
| !! | ACCCACTTGGGTTGGCCTAG+TGG | - | chr6_4:61355126-61355145 | Msa0992510:CDS | 60.0% |
| ! | TGGGAGTGTGCTCCTCCTTG+AGG | - | chr6_4:61355164-61355183 | Msa0992510:CDS | 60.0% |
| GTGCTCCTCCTTGAGGTCTC+AGG | - | chr6_4:61355171-61355190 | Msa0992510:CDS | 60.0% | |
| ! | CTCTCCGGTGCCAGTTTAGG+TGG | - | chr6_4:61355201-61355220 | Msa0992510:CDS | 60.0% |
| GCACAGCGACATGTTCCTGC+TGG | - | chr6_4:61357548-61357567 | Msa0992510:intron | 60.0% | |
| GACTTGAGGCGAACACCAGC+AGG | + | chr6_4:61357566-61357585 | None:intergenic | 60.0% | |
| GCGGATACGACCACTGCCAT+TGG | - | chr6_4:61358482-61358501 | Msa0992510:CDS | 60.0% | |
| TCTGGGCGCAACCGCCATCT+GGG | + | chr6_4:61355351-61355370 | None:intergenic | 65.0% | |
| ATCTGGGCGCAACCGCCATC+TGG | + | chr6_4:61355352-61355371 | None:intergenic | 65.0% | |
| ! | AGATGGCGGTTGCGCCCAGA+TGG | - | chr6_4:61355351-61355370 | Msa0992510:intron | 65.0% |
| TGGCGGTTGCGCCCAGATGG+CGG | - | chr6_4:61355354-61355373 | Msa0992510:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 61353986 | 61358775 | 61353986 | ID=Msa0992510;Name=Msa0992510 |
| chr6_4 | mRNA | 61353986 | 61358775 | 61353986 | ID=Msa0992510-mRNA-1;Parent=Msa0992510;Name=Msa0992510-mRNA-1;_AED=0.01;_eAED=0.01;_QI=254|1|1|1|1|0.8|5|217|326 |
| chr6_4 | exon | 61353986 | 61354317 | 61353986 | ID=Msa0992510-mRNA-1:exon:11868;Parent=Msa0992510-mRNA-1 |
| chr6_4 | exon | 61355116 | 61355366 | 61355116 | ID=Msa0992510-mRNA-1:exon:11867;Parent=Msa0992510-mRNA-1 |
| chr6_4 | exon | 61355966 | 61356129 | 61355966 | ID=Msa0992510-mRNA-1:exon:11866;Parent=Msa0992510-mRNA-1 |
| chr6_4 | exon | 61356500 | 61356663 | 61356500 | ID=Msa0992510-mRNA-1:exon:11865;Parent=Msa0992510-mRNA-1 |
| chr6_4 | exon | 61358235 | 61358775 | 61358235 | ID=Msa0992510-mRNA-1:exon:11864;Parent=Msa0992510-mRNA-1 |
| chr6_4 | five_prime_UTR | 61358522 | 61358775 | 61358522 | ID=Msa0992510-mRNA-1:five_prime_utr;Parent=Msa0992510-mRNA-1 |
| chr6_4 | CDS | 61358235 | 61358521 | 61358235 | ID=Msa0992510-mRNA-1:cds;Parent=Msa0992510-mRNA-1 |
| chr6_4 | CDS | 61356500 | 61356663 | 61356500 | ID=Msa0992510-mRNA-1:cds;Parent=Msa0992510-mRNA-1 |
| chr6_4 | CDS | 61355966 | 61356129 | 61355966 | ID=Msa0992510-mRNA-1:cds;Parent=Msa0992510-mRNA-1 |
| chr6_4 | CDS | 61355116 | 61355366 | 61355116 | ID=Msa0992510-mRNA-1:cds;Parent=Msa0992510-mRNA-1 |
| chr6_4 | CDS | 61354203 | 61354317 | 61354203 | ID=Msa0992510-mRNA-1:cds;Parent=Msa0992510-mRNA-1 |
| chr6_4 | three_prime_UTR | 61353986 | 61354202 | 61353986 | ID=Msa0992510-mRNA-1:three_prime_utr;Parent=Msa0992510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
