Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944020 | KEH25543.1 | 84.211 | 95 | 8 | 1 | 25 | 119 | 1 | 88 | 1.84e-49 | 162 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944020 | A0A072U8W6 | 84.211 | 95 | 8 | 1 | 25 | 119 | 1 | 88 | 8.77e-50 | 162 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0944020 | 0.807628 | 4.606356e-50 | -8.615850e-47 |
| Msa0010110 | Msa0944020 | 0.801879 | 7.310985e-49 | -8.615850e-47 |
| Msa0023480 | Msa0944020 | 0.821271 | 4.411336e-53 | -8.615850e-47 |
| Msa0024400 | Msa0944020 | 0.834438 | 2.997072e-56 | -8.615850e-47 |
| Msa0030160 | Msa0944020 | 0.802666 | 5.035329e-49 | -8.615850e-47 |
| Msa0032080 | Msa0944020 | 0.828632 | 8.070651e-55 | -8.615850e-47 |
| Msa0032470 | Msa0944020 | 0.875566 | 2.786250e-68 | -8.615850e-47 |
| Msa0043980 | Msa0944020 | 0.800987 | 1.113606e-48 | -8.615850e-47 |
| Msa0060730 | Msa0944020 | -0.843762 | 1.147943e-58 | -8.615850e-47 |
| Msa0065680 | Msa0944020 | -0.813058 | 3.102405e-51 | -8.615850e-47 |
| Msa0071250 | Msa0944020 | 0.821114 | 4.794843e-53 | -8.615850e-47 |
| Msa0076290 | Msa0944020 | 0.820002 | 8.632060e-53 | -8.615850e-47 |
| Msa0081020 | Msa0944020 | 0.811736 | 6.029667e-51 | -8.615850e-47 |
| Msa0081780 | Msa0944020 | 0.801544 | 8.564612e-49 | -8.615850e-47 |
| Msa0090510 | Msa0944020 | 0.806333 | 8.654671e-50 | -8.615850e-47 |
| Msa0090550 | Msa0944020 | 0.804940 | 1.696779e-49 | -8.615850e-47 |
| Msa0104670 | Msa0944020 | 0.810314 | 1.225763e-50 | -8.615850e-47 |
| Msa0105410 | Msa0944020 | 0.811655 | 6.281579e-51 | -8.615850e-47 |
| Msa0106710 | Msa0944020 | 0.800338 | 1.510193e-48 | -8.615850e-47 |
| Msa0115790 | Msa0944020 | 0.837521 | 4.948707e-57 | -8.615850e-47 |
| Msa0117520 | Msa0944020 | 0.822561 | 2.217742e-53 | -8.615850e-47 |
| Msa0604290 | Msa0944020 | 0.839601 | 1.437628e-57 | -8.615850e-47 |
| Msa0611540 | Msa0944020 | -0.831669 | 1.464647e-55 | -8.615850e-47 |
| Msa0613110 | Msa0944020 | 0.804016 | 2.644603e-49 | -8.615850e-47 |
| Msa0613340 | Msa0944020 | 0.805258 | 1.456184e-49 | -8.615850e-47 |
| Msa0613420 | Msa0944020 | 0.867624 | 1.192920e-65 | -8.615850e-47 |
| Msa0623990 | Msa0944020 | 0.827709 | 1.346969e-54 | -8.615850e-47 |
| Msa0624060 | Msa0944020 | 0.841067 | 5.950152e-58 | -8.615850e-47 |
| Msa0625700 | Msa0944020 | 0.812551 | 4.004650e-51 | -8.615850e-47 |
| Msa0629240 | Msa0944020 | 0.815218 | 1.034736e-51 | -8.615850e-47 |
| Msa0637930 | Msa0944020 | -0.812744 | 3.634201e-51 | -8.615850e-47 |
| Msa0641130 | Msa0944020 | 0.842508 | 2.477941e-58 | -8.615850e-47 |
| Msa0646020 | Msa0944020 | 0.851223 | 1.021071e-60 | -8.615850e-47 |
| Msa0646420 | Msa0944020 | 0.853122 | 2.944506e-61 | -8.615850e-47 |
| Msa0653970 | Msa0944020 | 0.830076 | 3.599758e-55 | -8.615850e-47 |
| Msa0656930 | Msa0944020 | 0.804192 | 2.430404e-49 | -8.615850e-47 |
| Msa0657930 | Msa0944020 | -0.850278 | 1.882638e-60 | -8.615850e-47 |
| Msa0658890 | Msa0944020 | 0.817508 | 3.179233e-52 | -8.615850e-47 |
| Msa0662220 | Msa0944020 | 0.849304 | 3.524736e-60 | -8.615850e-47 |
| Msa0665280 | Msa0944020 | 0.818755 | 1.660763e-52 | -8.615850e-47 |
| Msa0676130 | Msa0944020 | 0.837583 | 4.771644e-57 | -8.615850e-47 |
| Msa0676180 | Msa0944020 | 0.838472 | 2.817984e-57 | -8.615850e-47 |
| Msa0686030 | Msa0944020 | 0.825848 | 3.746908e-54 | -8.615850e-47 |
| Msa0689320 | Msa0944020 | 0.819272 | 1.267294e-52 | -8.615850e-47 |
| Msa0694740 | Msa0944020 | 0.812502 | 4.104898e-51 | -8.615850e-47 |
| Msa0703810 | Msa0944020 | 0.842801 | 2.071820e-58 | -8.615850e-47 |
| Msa0711150 | Msa0944020 | 0.818897 | 1.542035e-52 | -8.615850e-47 |
| Msa0711450 | Msa0944020 | 0.824011 | 1.016880e-53 | -8.615850e-47 |
| Msa0724170 | Msa0944020 | 0.803843 | 2.872237e-49 | -8.615850e-47 |
| Msa0732050 | Msa0944020 | 0.805557 | 1.260040e-49 | -8.615850e-47 |
| Msa0733010 | Msa0944020 | 0.820352 | 7.176535e-53 | -8.615850e-47 |
| Msa0738030 | Msa0944020 | 0.852831 | 3.566494e-61 | -8.615850e-47 |
| Msa0741440 | Msa0944020 | 0.842361 | 2.709726e-58 | -8.615850e-47 |
| Msa0743930 | Msa0944020 | 0.827896 | 1.214224e-54 | -8.615850e-47 |
| Msa0746170 | Msa0944020 | 0.801613 | 8.290684e-49 | -8.615850e-47 |
| Msa0746210 | Msa0944020 | 0.804546 | 2.050877e-49 | -8.615850e-47 |
| Msa0747630 | Msa0944020 | 0.825362 | 4.885545e-54 | -8.615850e-47 |
| Msa0750850 | Msa0944020 | 0.837114 | 6.289751e-57 | -8.615850e-47 |
| Msa0769970 | Msa0944020 | 0.833530 | 5.058388e-56 | -8.615850e-47 |
| Msa0784480 | Msa0944020 | 0.823078 | 1.680479e-53 | -8.615850e-47 |
| Msa0795340 | Msa0944020 | 0.802624 | 5.135486e-49 | -8.615850e-47 |
| Msa0800460 | Msa0944020 | 0.808049 | 3.749000e-50 | -8.615850e-47 |
| Msa0816130 | Msa0944020 | 0.835580 | 1.544455e-56 | -8.615850e-47 |
| Msa0818060 | Msa0944020 | 0.812421 | 4.275314e-51 | -8.615850e-47 |
| Msa0822500 | Msa0944020 | 0.846298 | 2.370901e-59 | -8.615850e-47 |
| Msa0830230 | Msa0944020 | 0.830090 | 3.572536e-55 | -8.615850e-47 |
| Msa0121230 | Msa0944020 | 0.812287 | 4.574711e-51 | -8.615850e-47 |
| Msa0138020 | Msa0944020 | 0.821575 | 3.753331e-53 | -8.615850e-47 |
| Msa0139550 | Msa0944020 | -0.852968 | 3.257300e-61 | -8.615850e-47 |
| Msa0144530 | Msa0944020 | 0.827657 | 1.386094e-54 | -8.615850e-47 |
| Msa0148080 | Msa0944020 | 0.826099 | 3.266270e-54 | -8.615850e-47 |
| Msa0150230 | Msa0944020 | 0.800619 | 1.323747e-48 | -8.615850e-47 |
| Msa0150860 | Msa0944020 | 0.812245 | 4.672387e-51 | -8.615850e-47 |
| Msa0154840 | Msa0944020 | -0.809997 | 1.434734e-50 | -8.615850e-47 |
| Msa0160960 | Msa0944020 | 0.844016 | 9.816822e-59 | -8.615850e-47 |
| Msa0163510 | Msa0944020 | 0.840160 | 1.027934e-57 | -8.615850e-47 |
| Msa0167980 | Msa0944020 | 0.807830 | 4.173891e-50 | -8.615850e-47 |
| Msa0168310 | Msa0944020 | 0.818031 | 2.423078e-52 | -8.615850e-47 |
| Msa0168410 | Msa0944020 | -0.803966 | 2.709157e-49 | -8.615850e-47 |
| Msa0186950 | Msa0944020 | 0.800217 | 1.598235e-48 | -8.615850e-47 |
| Msa0189040 | Msa0944020 | 0.803389 | 3.568958e-49 | -8.615850e-47 |
| Msa0189530 | Msa0944020 | 0.813619 | 2.334914e-51 | -8.615850e-47 |
| Msa0194920 | Msa0944020 | 0.825708 | 4.046394e-54 | -8.615850e-47 |
| Msa0196670 | Msa0944020 | 0.802665 | 5.038106e-49 | -8.615850e-47 |
| Msa0204960 | Msa0944020 | 0.829281 | 5.621087e-55 | -8.615850e-47 |
| Msa0206450 | Msa0944020 | 0.806348 | 8.591427e-50 | -8.615850e-47 |
| Msa0207040 | Msa0944020 | -0.811527 | 6.695444e-51 | -8.615850e-47 |
| Msa0217670 | Msa0944020 | 0.828427 | 9.046702e-55 | -8.615850e-47 |
| Msa0217700 | Msa0944020 | 0.824260 | 8.887911e-54 | -8.615850e-47 |
| Msa0218370 | Msa0944020 | 0.819899 | 9.114590e-53 | -8.615850e-47 |
| Msa0219590 | Msa0944020 | 0.823292 | 1.498380e-53 | -8.615850e-47 |
| Msa0220400 | Msa0944020 | -0.816992 | 4.154180e-52 | -8.615850e-47 |
| Msa0222150 | Msa0944020 | 0.824918 | 6.222253e-54 | -8.615850e-47 |
| Msa0223340 | Msa0944020 | 0.805192 | 1.502899e-49 | -8.615850e-47 |
| Msa0231060 | Msa0944020 | 0.800123 | 1.670824e-48 | -8.615850e-47 |
| Msa0231800 | Msa0944020 | 0.810157 | 1.325032e-50 | -8.615850e-47 |
| Msa0234410 | Msa0944020 | -0.821862 | 3.221499e-53 | -8.615850e-47 |
| Msa0236920 | Msa0944020 | 0.805712 | 1.169148e-49 | -8.615850e-47 |
| Msa0237300 | Msa0944020 | 0.804998 | 1.650107e-49 | -8.615850e-47 |
| Msa0366210 | Msa0944020 | 0.809270 | 2.056142e-50 | -8.615850e-47 |
| Msa0374220 | Msa0944020 | 0.863550 | 2.297351e-64 | -8.615850e-47 |
| Msa0374340 | Msa0944020 | -0.833925 | 4.028877e-56 | -8.615850e-47 |
| Msa0374420 | Msa0944020 | -0.821686 | 3.538334e-53 | -8.615850e-47 |
| Msa0374890 | Msa0944020 | 0.812098 | 5.029681e-51 | -8.615850e-47 |
| Msa0376630 | Msa0944020 | 0.808608 | 2.849108e-50 | -8.615850e-47 |
| Msa0379690 | Msa0944020 | 0.822967 | 1.784540e-53 | -8.615850e-47 |
| Msa0384090 | Msa0944020 | 0.829046 | 6.406656e-55 | -8.615850e-47 |
| Msa0385500 | Msa0944020 | 0.827613 | 1.420189e-54 | -8.615850e-47 |
| Msa0388730 | Msa0944020 | 0.839080 | 1.961803e-57 | -8.615850e-47 |
| Msa0389210 | Msa0944020 | 0.827609 | 1.423158e-54 | -8.615850e-47 |
| Msa0395750 | Msa0944020 | 0.818924 | 1.520440e-52 | -8.615850e-47 |
| Msa0398670 | Msa0944020 | 0.802826 | 4.666496e-49 | -8.615850e-47 |
| Msa0403470 | Msa0944020 | -0.812735 | 3.650385e-51 | -8.615850e-47 |
| Msa0403770 | Msa0944020 | 0.810552 | 1.088861e-50 | -8.615850e-47 |
| Msa0414140 | Msa0944020 | 0.816582 | 5.135569e-52 | -8.615850e-47 |
| Msa0416510 | Msa0944020 | 0.824506 | 7.779513e-54 | -8.615850e-47 |
| Msa0417330 | Msa0944020 | 0.804619 | 1.980162e-49 | -8.615850e-47 |
| Msa0425170 | Msa0944020 | 0.817399 | 3.365124e-52 | -8.615850e-47 |
| Msa0432160 | Msa0944020 | 0.818454 | 1.943517e-52 | -8.615850e-47 |
| Msa0432500 | Msa0944020 | 0.802963 | 4.371492e-49 | -8.615850e-47 |
| Msa0434540 | Msa0944020 | 0.844656 | 6.604420e-59 | -8.615850e-47 |
| Msa0439980 | Msa0944020 | 0.800277 | 1.554515e-48 | -8.615850e-47 |
| Msa0440510 | Msa0944020 | 0.800575 | 1.351428e-48 | -8.615850e-47 |
| Msa0469890 | Msa0944020 | 0.854125 | 1.516078e-61 | -8.615850e-47 |
| Msa0470360 | Msa0944020 | 0.828684 | 7.839536e-55 | -8.615850e-47 |
| Msa0470880 | Msa0944020 | 0.867980 | 9.167243e-66 | -8.615850e-47 |
| Msa0471670 | Msa0944020 | 0.812131 | 4.947625e-51 | -8.615850e-47 |
| Msa0476680 | Msa0944020 | 0.822721 | 2.035360e-53 | -8.615850e-47 |
| Msa0478370 | Msa0944020 | 0.834038 | 3.776808e-56 | -8.615850e-47 |
| Msa0240900 | Msa0944020 | 0.805075 | 1.590167e-49 | -8.615850e-47 |
| Msa0241140 | Msa0944020 | 0.861824 | 7.820858e-64 | -8.615850e-47 |
| Msa0256140 | Msa0944020 | 0.800487 | 1.408517e-48 | -8.615850e-47 |
| Msa0257490 | Msa0944020 | 0.825663 | 4.144972e-54 | -8.615850e-47 |
| Msa0257520 | Msa0944020 | 0.805249 | 1.462347e-49 | -8.615850e-47 |
| Msa0259680 | Msa0944020 | 0.846121 | 2.650165e-59 | -8.615850e-47 |
| Msa0261090 | Msa0944020 | 0.821400 | 4.119510e-53 | -8.615850e-47 |
| Msa0267920 | Msa0944020 | 0.807080 | 6.019119e-50 | -8.615850e-47 |
| Msa0269970 | Msa0944020 | 0.821395 | 4.130554e-53 | -8.615850e-47 |
| Msa0277960 | Msa0944020 | 0.834116 | 3.610486e-56 | -8.615850e-47 |
| Msa0278580 | Msa0944020 | 0.844845 | 5.872200e-59 | -8.615850e-47 |
| Msa0287840 | Msa0944020 | 0.812490 | 4.130999e-51 | -8.615850e-47 |
| Msa0287870 | Msa0944020 | 0.843417 | 1.419612e-58 | -8.615850e-47 |
| Msa0296790 | Msa0944020 | 0.819068 | 1.410333e-52 | -8.615850e-47 |
| Msa0304730 | Msa0944020 | 0.820936 | 5.271511e-53 | -8.615850e-47 |
| Msa0305410 | Msa0944020 | 0.811375 | 7.225277e-51 | -8.615850e-47 |
| Msa0316390 | Msa0944020 | 0.816142 | 6.440677e-52 | -8.615850e-47 |
| Msa0317960 | Msa0944020 | 0.828750 | 7.555506e-55 | -8.615850e-47 |
| Msa0317970 | Msa0944020 | 0.813146 | 2.967283e-51 | -8.615850e-47 |
| Msa0318680 | Msa0944020 | 0.898945 | 3.224672e-77 | -8.615850e-47 |
| Msa0341480 | Msa0944020 | 0.853928 | 1.727289e-61 | -8.615850e-47 |
| Msa0349470 | Msa0944020 | 0.803118 | 4.060681e-49 | -8.615850e-47 |
| Msa0363790 | Msa0944020 | 0.805872 | 1.082097e-49 | -8.615850e-47 |
| Msa0491000 | Msa0944020 | 0.803960 | 2.715697e-49 | -8.615850e-47 |
| Msa0500700 | Msa0944020 | -0.809479 | 1.853815e-50 | -8.615850e-47 |
| Msa0510710 | Msa0944020 | -0.800355 | 1.498646e-48 | -8.615850e-47 |
| Msa0515340 | Msa0944020 | 0.845725 | 3.394281e-59 | -8.615850e-47 |
| Msa0521010 | Msa0944020 | 0.825192 | 5.358476e-54 | -8.615850e-47 |
| Msa0522500 | Msa0944020 | 0.834802 | 2.427698e-56 | -8.615850e-47 |
| Msa0525770 | Msa0944020 | 0.807177 | 5.740848e-50 | -8.615850e-47 |
| Msa0527540 | Msa0944020 | 0.848475 | 5.987301e-60 | -8.615850e-47 |
| Msa0530560 | Msa0944020 | 0.821114 | 4.794843e-53 | -8.615850e-47 |
| Msa0534150 | Msa0944020 | 0.814874 | 1.233304e-51 | -8.615850e-47 |
| Msa0542560 | Msa0944020 | 0.843419 | 1.417416e-58 | -8.615850e-47 |
| Msa0545050 | Msa0944020 | 0.849507 | 3.092913e-60 | -8.615850e-47 |
| Msa0548650 | Msa0944020 | -0.811495 | 6.805636e-51 | -8.615850e-47 |
| Msa0549950 | Msa0944020 | 0.853571 | 2.188161e-61 | -8.615850e-47 |
| Msa0556230 | Msa0944020 | -0.817910 | 2.580400e-52 | -8.615850e-47 |
| Msa0556660 | Msa0944020 | 0.818507 | 1.890595e-52 | -8.615850e-47 |
| Msa0558650 | Msa0944020 | 0.827294 | 1.693742e-54 | -8.615850e-47 |
| Msa0566120 | Msa0944020 | -0.830046 | 3.660244e-55 | -8.615850e-47 |
| Msa0566350 | Msa0944020 | 0.819243 | 1.286693e-52 | -8.615850e-47 |
| Msa0566750 | Msa0944020 | 0.808952 | 2.405347e-50 | -8.615850e-47 |
| Msa0567350 | Msa0944020 | 0.808817 | 2.570434e-50 | -8.615850e-47 |
| Msa0567520 | Msa0944020 | 0.818147 | 2.281151e-52 | -8.615850e-47 |
| Msa0572550 | Msa0944020 | -0.806993 | 6.279121e-50 | -8.615850e-47 |
| Msa0574930 | Msa0944020 | 0.830943 | 2.208735e-55 | -8.615850e-47 |
| Msa0575320 | Msa0944020 | 0.810443 | 1.149877e-50 | -8.615850e-47 |
| Msa0587120 | Msa0944020 | 0.810993 | 8.742020e-51 | -8.615850e-47 |
| Msa0589260 | Msa0944020 | -0.802138 | 6.467274e-49 | -8.615850e-47 |
| Msa0592330 | Msa0944020 | 0.810404 | 1.172316e-50 | -8.615850e-47 |
| Msa0594050 | Msa0944020 | 0.807614 | 4.637664e-50 | -8.615850e-47 |
| Msa0600590 | Msa0944020 | 0.842524 | 2.452887e-58 | -8.615850e-47 |
| Msa0846860 | Msa0944020 | 0.833276 | 5.853112e-56 | -8.615850e-47 |
| Msa0849040 | Msa0944020 | 0.823376 | 1.431883e-53 | -8.615850e-47 |
| Msa0857940 | Msa0944020 | 0.830585 | 2.702629e-55 | -8.615850e-47 |
| Msa0858390 | Msa0944020 | 0.824987 | 5.992282e-54 | -8.615850e-47 |
| Msa0861570 | Msa0944020 | 0.801052 | 1.079807e-48 | -8.615850e-47 |
| Msa0870510 | Msa0944020 | 0.823266 | 1.519349e-53 | -8.615850e-47 |
| Msa0878220 | Msa0944020 | 0.964855 | 7.437081e-124 | -8.615850e-47 |
| Msa0880810 | Msa0944020 | 0.825209 | 5.311567e-54 | -8.615850e-47 |
| Msa0894710 | Msa0944020 | 0.832982 | 6.925527e-56 | -8.615850e-47 |
| Msa0910960 | Msa0944020 | 0.803692 | 3.087458e-49 | -8.615850e-47 |
| Msa0921420 | Msa0944020 | 0.809386 | 1.941672e-50 | -8.615850e-47 |
| Msa0930270 | Msa0944020 | 0.817470 | 3.242787e-52 | -8.615850e-47 |
| Msa0943970 | Msa0944020 | 0.954001 | 7.882565e-112 | -8.615850e-47 |
| Msa0944020 | Msa0946110 | 0.802569 | 5.272726e-49 | -8.615850e-47 |
| Msa0944020 | Msa0960390 | 0.809890 | 1.512697e-50 | -8.615850e-47 |
| Msa0944020 | Msa0964310 | 0.802539 | 5.348618e-49 | -8.615850e-47 |
| Msa0944020 | Msa0965290 | 0.809296 | 2.030112e-50 | -8.615850e-47 |
| Msa0944020 | Msa0985180 | 0.815313 | 9.854479e-52 | -8.615850e-47 |
| Msa0944020 | Msa0992510 | 0.852499 | 4.436063e-61 | -8.615850e-47 |
| Msa0944020 | Msa0993190 | 0.806990 | 6.289539e-50 | -8.615850e-47 |
| Msa0944020 | Msa0999680 | 0.805808 | 1.116460e-49 | -8.615850e-47 |
| Msa0944020 | Msa1024680 | 0.802729 | 4.885775e-49 | -8.615850e-47 |
| Msa0944020 | Msa1025080 | 0.803560 | 3.288777e-49 | -8.615850e-47 |
| Msa0944020 | Msa1037520 | 0.813870 | 2.056409e-51 | -8.615850e-47 |
| Msa0944020 | Msa1047760 | 0.816809 | 4.565406e-52 | -8.615850e-47 |
| Msa0944020 | Msa1048070 | -0.802455 | 5.563867e-49 | -8.615850e-47 |
| Msa0944020 | Msa1048220 | 0.810495 | 1.120693e-50 | -8.615850e-47 |
| Msa0944020 | Msa1051850 | 0.829452 | 5.107180e-55 | -8.615850e-47 |
| Msa0944020 | Msa1059470 | 0.809719 | 1.646867e-50 | -8.615850e-47 |
| Msa0944020 | Msa1061740 | 0.803799 | 2.933431e-49 | -8.615850e-47 |
| Msa0944020 | Msa1062040 | 0.827273 | 1.713703e-54 | -8.615850e-47 |
| Msa0944020 | Msa1063360 | 0.823618 | 1.256993e-53 | -8.615850e-47 |
| Msa0944020 | Msa1068600 | 0.818127 | 2.305303e-52 | -8.615850e-47 |
| Msa0944020 | Msa1071320 | 0.803605 | 3.218345e-49 | -8.615850e-47 |
| Msa0944020 | Msa1081790 | -0.838227 | 3.260266e-57 | -8.615850e-47 |
| Msa0944020 | Msa1089460 | 0.841796 | 3.823584e-58 | -8.615850e-47 |
| Msa0944020 | Msa1096070 | 0.810018 | 1.419583e-50 | -8.615850e-47 |
| Msa0944020 | Msa1096950 | 0.812988 | 3.212755e-51 | -8.615850e-47 |
| Msa0944020 | Msa1100130 | -0.801994 | 6.922179e-49 | -8.615850e-47 |
| Msa0944020 | Msa1104560 | 0.802930 | 4.440141e-49 | -8.615850e-47 |
| Msa0944020 | Msa1107200 | 0.820242 | 7.608483e-53 | -8.615850e-47 |
| Msa0944020 | Msa1108710 | 0.808224 | 3.439491e-50 | -8.615850e-47 |
| Msa0944020 | Msa1122150 | 0.843510 | 1.340533e-58 | -8.615850e-47 |
| Msa0944020 | Msa1140540 | 0.801465 | 8.889936e-49 | -8.615850e-47 |
| Msa0944020 | Msa1140630 | 0.860268 | 2.324725e-63 | -8.615850e-47 |
| Msa0944020 | Msa1150280 | 0.813359 | 2.664560e-51 | -8.615850e-47 |
| Msa0944020 | Msa1150780 | 0.816280 | 5.998648e-52 | -8.615850e-47 |
| Msa0944020 | Msa1159160 | 0.826703 | 2.346024e-54 | -8.615850e-47 |
| Msa0944020 | Msa1160560 | 0.848141 | 7.404531e-60 | -8.615850e-47 |
| Msa0944020 | Msa1166090 | -0.835788 | 1.368231e-56 | -8.615850e-47 |
| Msa0944020 | Msa1173340 | 0.843145 | 1.677779e-58 | -8.615850e-47 |
| Msa0944020 | Msa1175100 | 0.831330 | 1.774619e-55 | -8.615850e-47 |
| Msa0944020 | Msa1175200 | 0.812993 | 3.204662e-51 | -8.615850e-47 |
| Msa0944020 | Msa1176720 | 0.801008 | 1.102364e-48 | -8.615850e-47 |
| Msa0944020 | Msa1178580 | 0.810483 | 1.127028e-50 | -8.615850e-47 |
| Msa0944020 | Msa1179630 | 0.842103 | 3.171700e-58 | -8.615850e-47 |
| Msa0944020 | Msa1184230 | 0.806552 | 7.781026e-50 | -8.615850e-47 |
| Msa0944020 | Msa1184690 | 0.839329 | 1.690881e-57 | -8.615850e-47 |
| Msa0944020 | Msa1184910 | 0.807691 | 4.466357e-50 | -8.615850e-47 |
| Msa0944020 | Msa1190100 | -0.838524 | 2.732831e-57 | -8.615850e-47 |
| Msa0944020 | Msa1196610 | -0.826049 | 3.357597e-54 | -8.615850e-47 |
| Msa0944020 | Msa1202990 | 0.822405 | 2.411174e-53 | -8.615850e-47 |
| Msa0944020 | Msa1207310 | 0.818952 | 1.498550e-52 | -8.615850e-47 |
| Msa0944020 | Msa1213890 | 0.862090 | 6.479902e-64 | -8.615850e-47 |
| Msa0944020 | Msa1213980 | 0.838043 | 3.635703e-57 | -8.615850e-47 |
| Msa0944020 | Msa1214750 | 0.828139 | 1.061478e-54 | -8.615850e-47 |
| Msa0944020 | Msa1218580 | 0.822530 | 2.255379e-53 | -8.615850e-47 |
| Msa0944020 | Msa1218620 | 0.811471 | 6.887591e-51 | -8.615850e-47 |
| Msa0944020 | Msa1221330 | 0.800650 | 1.304781e-48 | -8.615850e-47 |
| Msa0944020 | Msa1228040 | 0.822085 | 2.860013e-53 | -8.615850e-47 |
| Msa0944020 | Msa1231840 | 0.802353 | 5.839737e-49 | -8.615850e-47 |
| Msa0944020 | Msa1232700 | 0.845761 | 3.320293e-59 | -8.615850e-47 |
| Msa0944020 | Msa1234470 | 0.827145 | 1.838496e-54 | -8.615850e-47 |
| Msa0944020 | Msa1236440 | 0.822720 | 2.036734e-53 | -8.615850e-47 |
| Msa0944020 | Msa1238500 | 0.819357 | 1.211835e-52 | -8.615850e-47 |
| Msa0944020 | Msa1238600 | 0.860091 | 2.630411e-63 | -8.615850e-47 |
| Msa0944020 | Msa1238660 | 0.819705 | 1.009337e-52 | -8.615850e-47 |
| Msa0944020 | Msa1240970 | 0.801487 | 8.798531e-49 | -8.615850e-47 |
| Msa0944020 | Msa1246360 | 0.807631 | 4.600686e-50 | -8.615850e-47 |
| Msa0944020 | Msa1257750 | 0.835541 | 1.580334e-56 | -8.615850e-47 |
| Msa0944020 | Msa1258030 | -0.829476 | 5.039781e-55 | -8.615850e-47 |
| Msa0944020 | Msa1271130 | 0.844159 | 8.986488e-59 | -8.615850e-47 |
| Msa0944020 | Msa1276150 | 0.814114 | 1.816449e-51 | -8.615850e-47 |
| Msa0944020 | Msa1277670 | 0.824270 | 8.837813e-54 | -8.615850e-47 |
| Msa0944020 | Msa1281660 | 0.801991 | 6.934629e-49 | -8.615850e-47 |
| Msa0944020 | Msa1289050 | 0.826839 | 2.176237e-54 | -8.615850e-47 |
| Msa0944020 | Msa1289090 | 0.835896 | 1.285177e-56 | -8.615850e-47 |
| Msa0944020 | Msa1297050 | -0.812497 | 4.115319e-51 | -8.615850e-47 |
| Msa0944020 | Msa1300700 | 0.818774 | 1.644658e-52 | -8.615850e-47 |
| Msa0944020 | Msa1306960 | 0.809493 | 1.841453e-50 | -8.615850e-47 |
| Msa0944020 | Msa1307180 | 0.810414 | 1.166517e-50 | -8.615850e-47 |
| Msa0944020 | Msa1307560 | 0.816074 | 6.669981e-52 | -8.615850e-47 |
| Msa0944020 | Msa1313280 | 0.800479 | 1.413520e-48 | -8.615850e-47 |
| Msa0944020 | Msa1315480 | 0.812753 | 3.618115e-51 | -8.615850e-47 |
| Msa0944020 | Msa1315580 | 0.806466 | 8.116524e-50 | -8.615850e-47 |
| Msa0944020 | Msa1316360 | 0.817723 | 2.844784e-52 | -8.615850e-47 |
| Msa0944020 | Msa1319560 | 0.835466 | 1.650497e-56 | -8.615850e-47 |
| Msa0944020 | Msa1325410 | -0.840244 | 9.770862e-58 | -8.615850e-47 |
| Msa0944020 | Msa1329200 | 0.862417 | 5.143597e-64 | -8.615850e-47 |
| Msa0944020 | Msa1331760 | 0.817895 | 2.601265e-52 | -8.615850e-47 |
| Msa0944020 | Msa1341060 | 0.826230 | 3.040150e-54 | -8.615850e-47 |
| Msa0944020 | Msa1342380 | 0.823155 | 1.612721e-53 | -8.615850e-47 |
| Msa0944020 | Msa1346840 | 0.897668 | 1.124841e-76 | -8.615850e-47 |
| Msa0944020 | Msa1355890 | 0.817661 | 2.937796e-52 | -8.615850e-47 |
| Msa0944020 | Msa1357560 | 0.864390 | 1.258201e-64 | -8.615850e-47 |
| Msa0944020 | Msa1358500 | 0.845043 | 5.194610e-59 | -8.615850e-47 |
| Msa0944020 | Msa1363820 | -0.821667 | 3.574100e-53 | -8.615850e-47 |
| Msa0944020 | Msa1364350 | -0.856504 | 3.077208e-62 | -8.615850e-47 |
| Msa0944020 | Msa1369920 | -0.833525 | 5.073053e-56 | -8.615850e-47 |
| Msa0944020 | Msa1378410 | 0.841657 | 4.159692e-58 | -8.615850e-47 |
| Msa0944020 | Msa1380220 | 0.808449 | 3.080516e-50 | -8.615850e-47 |
| Msa0944020 | Msa1392980 | 0.812794 | 3.543071e-51 | -8.615850e-47 |
| Msa0944020 | Msa1396400 | -0.836090 | 1.146822e-56 | -8.615850e-47 |
| Msa0944020 | Msa1401990 | 0.879554 | 1.133138e-69 | -8.615850e-47 |
| Msa0944020 | Msa1407190 | 0.802288 | 6.023195e-49 | -8.615850e-47 |
| Msa0944020 | Msa1407760 | 0.860605 | 1.838937e-63 | -8.615850e-47 |
| Msa0944020 | Msa1410550 | 0.849509 | 3.088685e-60 | -8.615850e-47 |
| Msa0944020 | Msa1411250 | 0.821530 | 3.844960e-53 | -8.615850e-47 |
| Msa0944020 | Msa1414820 | 0.817121 | 3.887054e-52 | -8.615850e-47 |
| Msa0944020 | Msa1419690 | 0.867579 | 1.232984e-65 | -8.615850e-47 |
| Msa0944020 | Msa1419840 | 0.849002 | 4.274556e-60 | -8.615850e-47 |
| Msa0944020 | Msa1425260 | 0.800647 | 1.306632e-48 | -8.615850e-47 |
| Msa0944020 | Msa1436600 | 0.814786 | 1.289935e-51 | -8.615850e-47 |
| Msa0944020 | Msa1437730 | 0.868194 | 7.823814e-66 | -8.615850e-47 |
| Msa0944020 | Msa1442920 | 0.864817 | 9.250868e-65 | -8.615850e-47 |
| Msa0944020 | Msa1443830 | 0.823002 | 1.751083e-53 | -8.615850e-47 |
| Msa0944020 | Msa1450440 | 0.847909 | 8.578119e-60 | -8.615850e-47 |
| Msa0944020 | Msa1452710 | 0.852851 | 3.518411e-61 | -8.615850e-47 |
| Msa0944020 | Msa1458680 | 0.837176 | 6.065315e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944020 | MtrunA17_Chr6g0460751 | 84.211 | 95 | 8 | 1 | 25 | 119 | 1 | 88 | 1.69e-53 | 162 |
| Msa0944020 | MtrunA17_Chr7g0254151 | 49.351 | 77 | 34 | 2 | 41 | 116 | 20 | 92 | 1.34e-14 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 29 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCACTCCCAGGGGATTT+TGG | 0.070443 | 6_3:+20393191 | None:intergenic |
| TGAATTTGTAATATCAAATA+AGG | 0.210050 | 6_3:-20393029 | Msa0944020:three_prime_UTR |
| GATGGGAAGAAGGGTCAATT+TGG | 0.296094 | 6_3:-20393258 | Msa0944020:CDS |
| CCACTAACATATTAATATTC+TGG | 0.317915 | 6_3:+20394314 | None:intergenic |
| GCTACATCCTAAACTTTAGA+AGG | 0.318376 | 6_3:-20393143 | Msa0944020:three_prime_UTR |
| CACCAGGCCCTTCATAATCA+TGG | 0.396641 | 6_3:+20393231 | None:intergenic |
| ATATTCTGGCGTACTATACT+AGG | 0.411234 | 6_3:+20394328 | None:intergenic |
| CCAGAATATTAATATGTTAG+TGG | 0.424217 | 6_3:-20394314 | Msa0944020:exon |
| TGAGAAAATGATGGTACATA+TGG | 0.459434 | 6_3:-20393291 | Msa0944020:CDS |
| TTGGAACTCCATGATTATGA+AGG | 0.463143 | 6_3:-20393239 | Msa0944020:CDS |
| ATGAAAGATTGATGGGAAGA+AGG | 0.472148 | 6_3:-20393268 | Msa0944020:CDS |
| TGAAAGATTGATGGGAAGAA+GGG | 0.490161 | 6_3:-20393267 | Msa0944020:CDS |
| ACATATGGATGAAAGATTGA+TGG | 0.490804 | 6_3:-20393276 | Msa0944020:CDS |
| TTATGTTCTTTATTTGCACC+AGG | 0.490997 | 6_3:+20393215 | None:intergenic |
| GCACTAACCTTATATAAAGA+AGG | 0.507798 | 6_3:+20394023 | None:intergenic |
| CTCCATGATTATGAAGGGCC+TGG | 0.512793 | 6_3:-20393233 | Msa0944020:CDS |
| GGAACATGGTTCATTGATGT+TGG | 0.518756 | 6_3:-20393321 | Msa0944020:CDS |
| CATATGGATGAAAGATTGAT+GGG | 0.518975 | 6_3:-20393275 | Msa0944020:CDS |
| GAACATAACCCAAAATCCCC+TGG | 0.526511 | 6_3:-20393200 | Msa0944020:CDS |
| AACCCAAAATCCCCTGGGAG+TGG | 0.548305 | 6_3:-20393194 | Msa0944020:CDS |
| TTTGCACATCAACCACTCCC+AGG | 0.556615 | 6_3:+20393182 | None:intergenic |
| TGGAACTCCATGATTATGAA+GGG | 0.574524 | 6_3:-20393238 | Msa0944020:CDS |
| TTGCACATCAACCACTCCCA+GGG | 0.587694 | 6_3:+20393183 | None:intergenic |
| AACATAACCCAAAATCCCCT+GGG | 0.609618 | 6_3:-20393199 | Msa0944020:CDS |
| TTTCATCTTGAATTGGATGG+TGG | 0.617406 | 6_3:+20394246 | None:intergenic |
| AATTAGAATCAAAGTATGTG+TGG | 0.621826 | 6_3:-20393088 | Msa0944020:three_prime_UTR |
| TTGCAGGGATAGCAAAGACA+TGG | 0.624053 | 6_3:+20394173 | None:intergenic |
| TGCACATCAACCACTCCCAG+GGG | 0.679834 | 6_3:+20393184 | None:intergenic |
| TGGATGGTGGAAGATAACAA+AGG | 0.717266 | 6_3:+20394259 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATAAAAATATTAGTGTTT+TGG | - | chr6_3:20394216-20394235 | Msa0944020:CDS | 10.0% |
| !!! | TAATAAAAATATTAGTGTTT+TGG | - | chr6_3:20394216-20394235 | Msa0944020:CDS | 10.0% |
| !!! | ATGTATTGAATTGATTTTTT+TGG | - | chr6_3:20393112-20393131 | Msa0944020:three_prime_UTR | 15.0% |
| !!! | TTTACTTTTCAAATTTTTGT+TGG | - | chr6_3:20393455-20393474 | Msa0944020:intron | 15.0% |
| !!! | TTTTTTATTCTTTTAAATCG+TGG | + | chr6_3:20393589-20393608 | None:intergenic | 15.0% |
| !! | TGAATTTGTAATATCAAATA+AGG | - | chr6_3:20394173-20394192 | Msa0944020:CDS | 15.0% |
| !!! | ATGTATTGAATTGATTTTTT+TGG | - | chr6_3:20393112-20393131 | Msa0944020:three_prime_UTR | 15.0% |
| !!! | TTTACTTTTCAAATTTTTGT+TGG | - | chr6_3:20393455-20393474 | Msa0944020:intron | 15.0% |
| !!! | TTTTTTATTCTTTTAAATCG+TGG | + | chr6_3:20393589-20393608 | None:intergenic | 15.0% |
| !! | TGAATTTGTAATATCAAATA+AGG | - | chr6_3:20394173-20394192 | Msa0944020:CDS | 15.0% |
| !!! | AGTTTTTTTTCATCTTGAAT+TGG | + | chr6_3:20392966-20392985 | None:intergenic | 20.0% |
| !!! | AGTTTTTCCTTCTTTATATA+AGG | - | chr6_3:20393172-20393191 | Msa0944020:exon | 20.0% |
| !!! | CTTCTTAATTTTCATCTATT+TGG | - | chr6_3:20393201-20393220 | Msa0944020:CDS | 20.0% |
| !!! | ATTTTTTCATCCAATATCTA+AGG | - | chr6_3:20393266-20393285 | Msa0944020:CDS | 20.0% |
| !!! | AACTTTTTTGGCAAAAATTA+AGG | + | chr6_3:20393804-20393823 | None:intergenic | 20.0% |
| !!! | GTTAATTAGTCAAACTTTTT+TGG | + | chr6_3:20393816-20393835 | None:intergenic | 20.0% |
| !!! | AAAAACTAATTAGTTTGAAC+TGG | - | chr6_3:20394250-20394269 | Msa0944020:CDS | 20.0% |
| !!! | AGTTTTTTTTCATCTTGAAT+TGG | + | chr6_3:20392966-20392985 | None:intergenic | 20.0% |
| !!! | AGTTTTTCCTTCTTTATATA+AGG | - | chr6_3:20393172-20393191 | Msa0944020:exon | 20.0% |
| !!! | CTTCTTAATTTTCATCTATT+TGG | - | chr6_3:20393201-20393220 | Msa0944020:CDS | 20.0% |
| !!! | ATTTTTTCATCCAATATCTA+AGG | - | chr6_3:20393266-20393285 | Msa0944020:CDS | 20.0% |
| !!! | AACTTTTTTGGCAAAAATTA+AGG | + | chr6_3:20393804-20393823 | None:intergenic | 20.0% |
| !!! | GTTAATTAGTCAAACTTTTT+TGG | + | chr6_3:20393816-20393835 | None:intergenic | 20.0% |
| !!! | AAAAACTAATTAGTTTGAAC+TGG | - | chr6_3:20394250-20394269 | Msa0944020:CDS | 20.0% |
| ! | CCACTAACATATTAATATTC+TGG | + | chr6_3:20392891-20392910 | None:intergenic | 25.0% |
| ! | CCAGAATATTAATATGTTAG+TGG | - | chr6_3:20392888-20392907 | Msa0944020:three_prime_UTR | 25.0% |
| !!! | TTTTTTCATCTTGAATTGGA+TGG | + | chr6_3:20392962-20392981 | None:intergenic | 25.0% |
| !!! | GAATTGATTTTTTTGGTTGT+AGG | - | chr6_3:20393119-20393138 | Msa0944020:three_prime_UTR | 25.0% |
| !! | ATCTTCACCATTCAAATTTT+TGG | + | chr6_3:20393147-20393166 | None:intergenic | 25.0% |
| !! | AAAGTCATGGTTATGTATTT+TGG | - | chr6_3:20393241-20393260 | Msa0944020:CDS | 25.0% |
| !! | TCATTATTTGTGTGTTTTGT+AGG | - | chr6_3:20393860-20393879 | Msa0944020:intron | 25.0% |
| ! | AATTAGAATCAAAGTATGTG+TGG | - | chr6_3:20394114-20394133 | Msa0944020:intron | 25.0% |
| ! | CCACTAACATATTAATATTC+TGG | + | chr6_3:20392891-20392910 | None:intergenic | 25.0% |
| ! | CCAGAATATTAATATGTTAG+TGG | - | chr6_3:20392888-20392907 | Msa0944020:three_prime_UTR | 25.0% |
| !!! | TTTTTTCATCTTGAATTGGA+TGG | + | chr6_3:20392962-20392981 | None:intergenic | 25.0% |
| !!! | GAATTGATTTTTTTGGTTGT+AGG | - | chr6_3:20393119-20393138 | Msa0944020:three_prime_UTR | 25.0% |
| !! | ATCTTCACCATTCAAATTTT+TGG | + | chr6_3:20393147-20393166 | None:intergenic | 25.0% |
| !! | AAAGTCATGGTTATGTATTT+TGG | - | chr6_3:20393241-20393260 | Msa0944020:CDS | 25.0% |
| !! | TCATTATTTGTGTGTTTTGT+AGG | - | chr6_3:20393860-20393879 | Msa0944020:intron | 25.0% |
| ! | AATTAGAATCAAAGTATGTG+TGG | - | chr6_3:20394114-20394133 | Msa0944020:intron | 25.0% |
| GTAGGAACCAAAAATTTGAA+TGG | - | chr6_3:20393137-20393156 | Msa0944020:three_prime_UTR | 30.0% | |
| GCACTAACCTTATATAAAGA+AGG | + | chr6_3:20393182-20393201 | None:intergenic | 30.0% | |
| !! | CCTCATTTTTCCTTAGATAT+TGG | + | chr6_3:20393279-20393298 | None:intergenic | 30.0% |
| CCAATATCTAAGGAAAAATG+AGG | - | chr6_3:20393276-20393295 | Msa0944020:CDS | 30.0% | |
| GGAAAAAAGTGAGAAAATGA+TGG | - | chr6_3:20393902-20393921 | Msa0944020:intron | 30.0% | |
| TGAGAAAATGATGGTACATA+TGG | - | chr6_3:20393911-20393930 | Msa0944020:intron | 30.0% | |
| ACATATGGATGAAAGATTGA+TGG | - | chr6_3:20393926-20393945 | Msa0944020:intron | 30.0% | |
| CATATGGATGAAAGATTGAT+GGG | - | chr6_3:20393927-20393946 | Msa0944020:intron | 30.0% | |
| ! | TTATGTTCTTTATTTGCACC+AGG | + | chr6_3:20393990-20394009 | None:intergenic | 30.0% |
| !!! | GATTTTGCCTTCTAAAGTTT+AGG | + | chr6_3:20394069-20394088 | None:intergenic | 30.0% |
| !!! | TGTGTGGTTTTTTGTTTCTT+TGG | - | chr6_3:20394130-20394149 | Msa0944020:intron | 30.0% |
| GTAGGAACCAAAAATTTGAA+TGG | - | chr6_3:20393137-20393156 | Msa0944020:three_prime_UTR | 30.0% | |
| GCACTAACCTTATATAAAGA+AGG | + | chr6_3:20393182-20393201 | None:intergenic | 30.0% | |
| !! | CCTCATTTTTCCTTAGATAT+TGG | + | chr6_3:20393279-20393298 | None:intergenic | 30.0% |
| CCAATATCTAAGGAAAAATG+AGG | - | chr6_3:20393276-20393295 | Msa0944020:CDS | 30.0% | |
| GGAAAAAAGTGAGAAAATGA+TGG | - | chr6_3:20393902-20393921 | Msa0944020:intron | 30.0% | |
| TGAGAAAATGATGGTACATA+TGG | - | chr6_3:20393911-20393930 | Msa0944020:intron | 30.0% | |
| ACATATGGATGAAAGATTGA+TGG | - | chr6_3:20393926-20393945 | Msa0944020:intron | 30.0% | |
| CATATGGATGAAAGATTGAT+GGG | - | chr6_3:20393927-20393946 | Msa0944020:intron | 30.0% | |
| ! | TTATGTTCTTTATTTGCACC+AGG | + | chr6_3:20393990-20394009 | None:intergenic | 30.0% |
| !!! | GATTTTGCCTTCTAAAGTTT+AGG | + | chr6_3:20394069-20394088 | None:intergenic | 30.0% |
| !!! | TGTGTGGTTTTTTGTTTCTT+TGG | - | chr6_3:20394130-20394149 | Msa0944020:intron | 30.0% |
| ATATTCTGGCGTACTATACT+AGG | + | chr6_3:20392877-20392896 | None:intergenic | 35.0% | |
| TTTCATCTTGAATTGGATGG+TGG | + | chr6_3:20392959-20392978 | None:intergenic | 35.0% | |
| ! | CAAAAACCTTACTTGTTGCA+GGG | + | chr6_3:20393047-20393066 | None:intergenic | 35.0% |
| ! | TCAAAAACCTTACTTGTTGC+AGG | + | chr6_3:20393048-20393067 | None:intergenic | 35.0% |
| TTCCTATTCTTGCAAAGTCA+TGG | - | chr6_3:20393228-20393247 | Msa0944020:CDS | 35.0% | |
| AACCATGACTTTGCAAGAAT+AGG | + | chr6_3:20393233-20393252 | None:intergenic | 35.0% | |
| ! | TTGTGTGTTTTGTAGGAACA+TGG | - | chr6_3:20393867-20393886 | Msa0944020:intron | 35.0% |
| ATGAAAGATTGATGGGAAGA+AGG | - | chr6_3:20393934-20393953 | Msa0944020:intron | 35.0% | |
| TGAAAGATTGATGGGAAGAA+GGG | - | chr6_3:20393935-20393954 | Msa0944020:intron | 35.0% | |
| TTGGAACTCCATGATTATGA+AGG | - | chr6_3:20393963-20393982 | Msa0944020:intron | 35.0% | |
| TGGAACTCCATGATTATGAA+GGG | - | chr6_3:20393964-20393983 | Msa0944020:intron | 35.0% | |
| GCTACATCCTAAACTTTAGA+AGG | - | chr6_3:20394059-20394078 | Msa0944020:CDS | 35.0% | |
| ATATTCTGGCGTACTATACT+AGG | + | chr6_3:20392877-20392896 | None:intergenic | 35.0% | |
| TTTCATCTTGAATTGGATGG+TGG | + | chr6_3:20392959-20392978 | None:intergenic | 35.0% | |
| ! | CAAAAACCTTACTTGTTGCA+GGG | + | chr6_3:20393047-20393066 | None:intergenic | 35.0% |
| ! | TCAAAAACCTTACTTGTTGC+AGG | + | chr6_3:20393048-20393067 | None:intergenic | 35.0% |
| TTCCTATTCTTGCAAAGTCA+TGG | - | chr6_3:20393228-20393247 | Msa0944020:CDS | 35.0% | |
| AACCATGACTTTGCAAGAAT+AGG | + | chr6_3:20393233-20393252 | None:intergenic | 35.0% | |
| ! | TTGTGTGTTTTGTAGGAACA+TGG | - | chr6_3:20393867-20393886 | Msa0944020:intron | 35.0% |
| ATGAAAGATTGATGGGAAGA+AGG | - | chr6_3:20393934-20393953 | Msa0944020:intron | 35.0% | |
| TGAAAGATTGATGGGAAGAA+GGG | - | chr6_3:20393935-20393954 | Msa0944020:intron | 35.0% | |
| TTGGAACTCCATGATTATGA+AGG | - | chr6_3:20393963-20393982 | Msa0944020:intron | 35.0% | |
| TGGAACTCCATGATTATGAA+GGG | - | chr6_3:20393964-20393983 | Msa0944020:intron | 35.0% | |
| GCTACATCCTAAACTTTAGA+AGG | - | chr6_3:20394059-20394078 | Msa0944020:CDS | 35.0% | |
| !! | TGGATGGTGGAAGATAACAA+AGG | + | chr6_3:20392946-20392965 | None:intergenic | 40.0% |
| CAACAATTGTGTCAAGCAGA+AGG | - | chr6_3:20393409-20393428 | Msa0944020:intron | 40.0% | |
| GGAACATGGTTCATTGATGT+TGG | - | chr6_3:20393881-20393900 | Msa0944020:intron | 40.0% | |
| AACATAACCCAAAATCCCCT+GGG | - | chr6_3:20394003-20394022 | Msa0944020:intron | 40.0% | |
| !! | TGGATGGTGGAAGATAACAA+AGG | + | chr6_3:20392946-20392965 | None:intergenic | 40.0% |
| CAACAATTGTGTCAAGCAGA+AGG | - | chr6_3:20393409-20393428 | Msa0944020:intron | 40.0% | |
| GGAACATGGTTCATTGATGT+TGG | - | chr6_3:20393881-20393900 | Msa0944020:intron | 40.0% | |
| AACATAACCCAAAATCCCCT+GGG | - | chr6_3:20394003-20394022 | Msa0944020:intron | 40.0% | |
| TTGCAGGGATAGCAAAGACA+TGG | + | chr6_3:20393032-20393051 | None:intergenic | 45.0% | |
| TGCTATCCCTGCAACAAGTA+AGG | - | chr6_3:20393038-20393057 | Msa0944020:three_prime_UTR | 45.0% | |
| GATGGGAAGAAGGGTCAATT+TGG | - | chr6_3:20393944-20393963 | Msa0944020:intron | 45.0% | |
| GAACATAACCCAAAATCCCC+TGG | - | chr6_3:20394002-20394021 | Msa0944020:intron | 45.0% | |
| TTGCAGGGATAGCAAAGACA+TGG | + | chr6_3:20393032-20393051 | None:intergenic | 45.0% | |
| TGCTATCCCTGCAACAAGTA+AGG | - | chr6_3:20393038-20393057 | Msa0944020:three_prime_UTR | 45.0% | |
| GATGGGAAGAAGGGTCAATT+TGG | - | chr6_3:20393944-20393963 | Msa0944020:intron | 45.0% | |
| GAACATAACCCAAAATCCCC+TGG | - | chr6_3:20394002-20394021 | Msa0944020:intron | 45.0% | |
| !!! | ATTAACTTTTTAATTTATTT+TGG | - | chr6_3:20393830-20393849 | Msa0944020:intron | 5.0% |
| !!! | ATTAACTTTTTAATTTATTT+TGG | - | chr6_3:20393830-20393849 | Msa0944020:intron | 5.0% |
| CTCCATGATTATGAAGGGCC+TGG | - | chr6_3:20393969-20393988 | Msa0944020:intron | 50.0% | |
| CACCAGGCCCTTCATAATCA+TGG | + | chr6_3:20393974-20393993 | None:intergenic | 50.0% | |
| ! | AACCACTCCCAGGGGATTTT+GGG | + | chr6_3:20394013-20394032 | None:intergenic | 50.0% |
| TTGCACATCAACCACTCCCA+GGG | + | chr6_3:20394022-20394041 | None:intergenic | 50.0% | |
| TTTGCACATCAACCACTCCC+AGG | + | chr6_3:20394023-20394042 | None:intergenic | 50.0% | |
| CTCCATGATTATGAAGGGCC+TGG | - | chr6_3:20393969-20393988 | Msa0944020:intron | 50.0% | |
| CACCAGGCCCTTCATAATCA+TGG | + | chr6_3:20393974-20393993 | None:intergenic | 50.0% | |
| ! | AACCACTCCCAGGGGATTTT+GGG | + | chr6_3:20394013-20394032 | None:intergenic | 50.0% |
| TTGCACATCAACCACTCCCA+GGG | + | chr6_3:20394022-20394041 | None:intergenic | 50.0% | |
| TTTGCACATCAACCACTCCC+AGG | + | chr6_3:20394023-20394042 | None:intergenic | 50.0% | |
| AACCCAAAATCCCCTGGGAG+TGG | - | chr6_3:20394008-20394027 | Msa0944020:intron | 55.0% | |
| ! | CAACCACTCCCAGGGGATTT+TGG | + | chr6_3:20394014-20394033 | None:intergenic | 55.0% |
| TGCACATCAACCACTCCCAG+GGG | + | chr6_3:20394021-20394040 | None:intergenic | 55.0% | |
| AACCCAAAATCCCCTGGGAG+TGG | - | chr6_3:20394008-20394027 | Msa0944020:intron | 55.0% | |
| ! | CAACCACTCCCAGGGGATTT+TGG | + | chr6_3:20394014-20394033 | None:intergenic | 55.0% |
| TGCACATCAACCACTCCCAG+GGG | + | chr6_3:20394021-20394040 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 20392845 | 20394379 | 20392845 | ID=Msa0944020;Name=Msa0944020 |
| chr6_3 | mRNA | 20392845 | 20394379 | 20392845 | ID=Msa0944020-mRNA-1;Parent=Msa0944020;Name=Msa0944020-mRNA-1;_AED=0.00;_eAED=0.00;_QI=56|1|1|1|1|1|3|345|119 |
| chr6_3 | exon | 20392845 | 20393342 | 20392845 | ID=Msa0944020-mRNA-1:exon:6084;Parent=Msa0944020-mRNA-1 |
| chr6_3 | exon | 20394031 | 20394083 | 20394031 | ID=Msa0944020-mRNA-1:exon:6083;Parent=Msa0944020-mRNA-1 |
| chr6_3 | exon | 20394170 | 20394379 | 20394170 | ID=Msa0944020-mRNA-1:exon:6082;Parent=Msa0944020-mRNA-1 |
| chr6_3 | five_prime_UTR | 20394324 | 20394379 | 20394324 | ID=Msa0944020-mRNA-1:five_prime_utr;Parent=Msa0944020-mRNA-1 |
| chr6_3 | CDS | 20394170 | 20394323 | 20394170 | ID=Msa0944020-mRNA-1:cds;Parent=Msa0944020-mRNA-1 |
| chr6_3 | CDS | 20394031 | 20394083 | 20394031 | ID=Msa0944020-mRNA-1:cds;Parent=Msa0944020-mRNA-1 |
| chr6_3 | CDS | 20393190 | 20393342 | 20393190 | ID=Msa0944020-mRNA-1:cds;Parent=Msa0944020-mRNA-1 |
| chr6_3 | three_prime_UTR | 20392845 | 20393189 | 20392845 | ID=Msa0944020-mRNA-1:three_prime_utr;Parent=Msa0944020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
