Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0223950 | XP_003601657.1 | 91.935 | 124 | 8 | 1 | 1 | 124 | 1 | 122 | 2.24e-70 | 218 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0223950 | sp|Q9LIS2|RBG4_ARATH | 59.350 | 123 | 45 | 4 | 1 | 122 | 1 | 119 | 3.67e-43 | 141 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0223950 | G7JA80 | 91.935 | 124 | 8 | 1 | 1 | 124 | 1 | 122 | 1.07e-70 | 218 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0114600 | Msa0223950 | 0.842844 | 2.017742e-58 | -8.615850e-47 |
Msa0129130 | Msa0223950 | 0.800081 | 1.703352e-48 | -8.615850e-47 |
Msa0184650 | Msa0223950 | 0.847535 | 1.087437e-59 | -8.615850e-47 |
Msa0223090 | Msa0223950 | 0.812423 | 4.271890e-51 | -8.615850e-47 |
Msa0223300 | Msa0223950 | 0.812063 | 5.118581e-51 | -8.615850e-47 |
Msa0223370 | Msa0223950 | 0.807197 | 5.686232e-50 | -8.615850e-47 |
Msa0223950 | Msa0264010 | 0.808526 | 2.965966e-50 | -8.615850e-47 |
Msa0223950 | Msa0265200 | 0.966863 | 1.715833e-126 | -8.615850e-47 |
Msa0223950 | Msa0339880 | 0.808048 | 3.750041e-50 | -8.615850e-47 |
Msa0223950 | Msa0342850 | 0.853526 | 2.253904e-61 | -8.615850e-47 |
Msa0223950 | Msa0382950 | 0.830297 | 3.179273e-55 | -8.615850e-47 |
Msa0223950 | Msa0544720 | 0.829442 | 5.136582e-55 | -8.615850e-47 |
Msa0223950 | Msa0554210 | 0.824247 | 8.951737e-54 | -8.615850e-47 |
Msa0223950 | Msa0557720 | 0.807438 | 5.054975e-50 | -8.615850e-47 |
Msa0223950 | Msa0587850 | 0.808000 | 3.840391e-50 | -8.615850e-47 |
Msa0223950 | Msa0608260 | 0.818168 | 2.255920e-52 | -8.615850e-47 |
Msa0223950 | Msa0691330 | 0.830893 | 2.272489e-55 | -8.615850e-47 |
Msa0223950 | Msa0718730 | 0.816234 | 6.143032e-52 | -8.615850e-47 |
Msa0223950 | Msa0814620 | 0.803809 | 2.919331e-49 | -8.615850e-47 |
Msa0223950 | Msa0823040 | 0.818843 | 1.585934e-52 | -8.615850e-47 |
Msa0223950 | Msa0839570 | 0.804512 | 2.084641e-49 | -8.615850e-47 |
Msa0223950 | Msa0979060 | 0.803864 | 2.844685e-49 | -8.615850e-47 |
Msa0223950 | Msa1050100 | 0.825366 | 4.874542e-54 | -8.615850e-47 |
Msa0223950 | Msa1079920 | 0.821446 | 4.021416e-53 | -8.615850e-47 |
Msa0223950 | Msa1106870 | 0.813216 | 2.863386e-51 | -8.615850e-47 |
Msa0223950 | Msa1128120 | 0.862637 | 4.400196e-64 | -8.615850e-47 |
Msa0223950 | Msa1211820 | 0.808086 | 3.680245e-50 | -8.615850e-47 |
Msa0223950 | Msa1215330 | 0.849266 | 3.611489e-60 | -8.615850e-47 |
Msa0223950 | Msa1215580 | 0.849821 | 2.527907e-60 | -8.615850e-47 |
Msa0223950 | Msa1341780 | 0.829045 | 6.411160e-55 | -8.615850e-47 |
Msa0223950 | Msa1364810 | 0.803245 | 3.821869e-49 | -8.615850e-47 |
Msa0223950 | Msa1404870 | 0.849103 | 4.007620e-60 | -8.615850e-47 |
Msa0223950 | Msa1433590 | 0.807185 | 5.719730e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0223950 | MtrunA17_Chr3g0121631 | 91.935 | 124 | 8 | 1 | 1 | 124 | 1 | 122 | 2.06e-74 | 218 |
Msa0223950 | MtrunA17_Chr4g0061451 | 52.893 | 121 | 52 | 3 | 1 | 116 | 1 | 121 | 2.48e-36 | 125 |
Msa0223950 | MtrunA17_Chr7g0219021 | 48.031 | 127 | 59 | 3 | 1 | 124 | 1 | 123 | 1.03e-34 | 120 |
Msa0223950 | MtrunA17_Chr3g0086861 | 43.511 | 131 | 63 | 3 | 1 | 124 | 1 | 127 | 2.30e-30 | 112 |
Msa0223950 | MtrunA17_Chr7g0219031 | 46.729 | 107 | 54 | 2 | 1 | 104 | 1 | 107 | 4.90e-28 | 99.8 |
Msa0223950 | MtrunA17_Chr3g0119311 | 50.588 | 85 | 41 | 1 | 38 | 121 | 36 | 120 | 2.92e-26 | 95.5 |
Msa0223950 | MtrunA17_Chr7g0266751 | 46.535 | 101 | 50 | 2 | 25 | 121 | 19 | 119 | 1.20e-24 | 91.7 |
Msa0223950 | MtrunA17_Chr4g0035001 | 51.316 | 76 | 36 | 1 | 39 | 113 | 7 | 82 | 1.30e-23 | 89.7 |
Msa0223950 | MtrunA17_Chr4g0035051 | 48.684 | 76 | 38 | 1 | 39 | 113 | 9 | 84 | 8.87e-23 | 86.3 |
Msa0223950 | MtrunA17_Chr4g0031091 | 43.820 | 89 | 49 | 1 | 28 | 115 | 23 | 111 | 1.60e-22 | 85.5 |
Msa0223950 | MtrunA17_Chr4g0035031 | 50.000 | 76 | 37 | 1 | 39 | 113 | 9 | 84 | 8.28e-22 | 85.9 |
Msa0223950 | MtrunA17_Chr2g0278661 | 50.649 | 77 | 37 | 1 | 39 | 114 | 8 | 84 | 9.77e-20 | 81.6 |
Msa0223950 | MtrunA17_Chr3g0116631 | 44.318 | 88 | 44 | 2 | 39 | 125 | 207 | 290 | 1.73e-19 | 81.6 |
Msa0223950 | MtrunA17_Chr3g0116631 | 39.362 | 94 | 53 | 2 | 31 | 123 | 102 | 192 | 1.65e-11 | 59.7 |
Msa0223950 | MtrunA17_Chr7g0263001 | 41.322 | 121 | 61 | 4 | 1 | 117 | 1 | 115 | 5.14e-19 | 77.4 |
Msa0223950 | MtrunA17_Chr1g0181111 | 49.367 | 79 | 39 | 1 | 39 | 116 | 197 | 275 | 7.07e-19 | 79.7 |
Msa0223950 | MtrunA17_Chr4g0042161 | 43.137 | 102 | 51 | 3 | 33 | 131 | 44 | 141 | 1.73e-18 | 75.9 |
Msa0223950 | MtrunA17_Chr1g0198431 | 36.792 | 106 | 63 | 2 | 24 | 128 | 178 | 280 | 1.22e-17 | 76.6 |
Msa0223950 | MtrunA17_Chr4g0058151 | 44.304 | 79 | 43 | 1 | 39 | 116 | 217 | 295 | 5.15e-17 | 75.1 |
Msa0223950 | MtrunA17_Chr4g0058151 | 43.529 | 85 | 45 | 2 | 39 | 122 | 123 | 205 | 1.94e-12 | 62.4 |
Msa0223950 | MtrunA17_Chr3g0101061 | 45.055 | 91 | 46 | 3 | 29 | 116 | 28 | 117 | 6.56e-17 | 75.9 |
Msa0223950 | MtrunA17_Chr1g0168601 | 45.679 | 81 | 43 | 1 | 39 | 118 | 154 | 234 | 8.50e-17 | 73.6 |
Msa0223950 | MtrunA17_Chr4g0050781 | 41.250 | 80 | 46 | 1 | 39 | 117 | 8 | 87 | 1.76e-16 | 72.4 |
Msa0223950 | MtrunA17_Chr6g0449481 | 33.945 | 109 | 63 | 2 | 33 | 132 | 128 | 236 | 1.25e-15 | 72.0 |
Msa0223950 | MtrunA17_Chr1g0210241 | 37.647 | 85 | 52 | 1 | 36 | 119 | 5 | 89 | 2.00e-15 | 70.5 |
Msa0223950 | MtrunA17_Chr3g0110211 | 42.697 | 89 | 49 | 2 | 38 | 124 | 112 | 200 | 5.10e-15 | 70.1 |
Msa0223950 | MtrunA17_Chr1g0201001 | 34.043 | 94 | 61 | 1 | 40 | 132 | 31 | 124 | 9.29e-15 | 69.7 |
Msa0223950 | MtrunA17_Chr3g0144311 | 35.714 | 84 | 54 | 0 | 38 | 121 | 29 | 112 | 1.07e-14 | 68.6 |
Msa0223950 | MtrunA17_Chr4g0038111 | 38.462 | 104 | 59 | 2 | 32 | 131 | 333 | 435 | 1.53e-14 | 68.9 |
Msa0223950 | MtrunA17_Chr1g0186351 | 36.471 | 85 | 54 | 0 | 34 | 118 | 108 | 192 | 1.79e-14 | 68.6 |
Msa0223950 | MtrunA17_Chr1g0186351 | 36.709 | 79 | 49 | 1 | 39 | 117 | 7 | 84 | 9.82e-12 | 60.8 |
Msa0223950 | MtrunA17_Chr7g0276531 | 37.662 | 77 | 48 | 0 | 38 | 114 | 18 | 94 | 2.78e-14 | 67.0 |
Msa0223950 | MtrunA17_Chr3g0088511 | 35.556 | 90 | 54 | 3 | 24 | 110 | 17 | 105 | 2.82e-14 | 64.7 |
Msa0223950 | MtrunA17_Chr6g0481071 | 35.000 | 80 | 51 | 1 | 38 | 116 | 95 | 174 | 3.18e-14 | 65.9 |
Msa0223950 | MtrunA17_Chr4g0070231 | 45.333 | 75 | 40 | 1 | 40 | 113 | 133 | 207 | 3.56e-14 | 67.8 |
Msa0223950 | MtrunA17_Chr4g0017401 | 35.484 | 93 | 56 | 1 | 38 | 126 | 16 | 108 | 3.62e-14 | 67.0 |
Msa0223950 | MtrunA17_Chr5g0447761 | 41.250 | 80 | 46 | 1 | 37 | 116 | 5 | 83 | 3.92e-14 | 67.8 |
Msa0223950 | MtrunA17_Chr8g0344491 | 45.122 | 82 | 43 | 2 | 40 | 120 | 149 | 229 | 4.49e-14 | 67.4 |
Msa0223950 | MtrunA17_Chr8g0346011 | 42.029 | 69 | 40 | 0 | 38 | 106 | 37 | 105 | 5.85e-14 | 66.6 |
Msa0223950 | MtrunA17_Chr7g0267571 | 40.230 | 87 | 51 | 1 | 36 | 121 | 210 | 296 | 6.06e-14 | 66.6 |
Msa0223950 | MtrunA17_Chr7g0267571 | 37.333 | 75 | 46 | 1 | 39 | 112 | 110 | 184 | 8.19e-11 | 58.2 |
Msa0223950 | MtrunA17_Chr4g0042151 | 32.479 | 117 | 73 | 3 | 2 | 116 | 11 | 123 | 2.01e-13 | 63.9 |
Msa0223950 | MtrunA17_Chr5g0430471 | 33.673 | 98 | 56 | 2 | 23 | 111 | 16 | 113 | 2.34e-13 | 62.8 |
Msa0223950 | MtrunA17_Chr1g0163591 | 41.176 | 85 | 49 | 1 | 37 | 121 | 161 | 244 | 2.62e-13 | 65.5 |
Msa0223950 | MtrunA17_Chr2g0290191 | 40.244 | 82 | 48 | 1 | 35 | 116 | 1 | 81 | 2.67e-13 | 65.5 |
Msa0223950 | MtrunA17_Chr2g0290191 | 27.869 | 122 | 79 | 2 | 9 | 130 | 85 | 197 | 1.48e-11 | 60.5 |
Msa0223950 | MtrunA17_Chr3g0135111 | 34.118 | 85 | 56 | 0 | 33 | 117 | 112 | 196 | 3.94e-13 | 64.7 |
Msa0223950 | MtrunA17_Chr3g0135111 | 38.636 | 88 | 53 | 1 | 29 | 116 | 1 | 87 | 7.21e-12 | 61.2 |
Msa0223950 | MtrunA17_Chr1g0153181 | 37.000 | 100 | 59 | 2 | 19 | 114 | 10 | 109 | 4.20e-13 | 64.7 |
Msa0223950 | MtrunA17_Chr2g0327921 | 36.250 | 80 | 50 | 1 | 38 | 116 | 7 | 86 | 4.49e-13 | 60.5 |
Msa0223950 | MtrunA17_Chr3g0127751 | 40.260 | 77 | 44 | 1 | 38 | 112 | 26 | 102 | 4.82e-13 | 63.9 |
Msa0223950 | MtrunA17_Chr5g0426311 | 35.065 | 77 | 50 | 0 | 38 | 114 | 16 | 92 | 6.99e-13 | 63.5 |
Msa0223950 | MtrunA17_Chr7g0268551 | 38.824 | 85 | 51 | 1 | 38 | 121 | 348 | 432 | 7.40e-13 | 63.9 |
Msa0223950 | MtrunA17_Chr4g0065741 | 37.500 | 80 | 49 | 1 | 36 | 114 | 69 | 148 | 1.31e-12 | 61.2 |
Msa0223950 | MtrunA17_Chr5g0419351 | 36.250 | 80 | 50 | 1 | 35 | 113 | 7 | 86 | 1.69e-12 | 61.2 |
Msa0223950 | MtrunA17_Chr3g0139111 | 42.683 | 82 | 45 | 2 | 40 | 120 | 147 | 227 | 1.85e-12 | 62.8 |
Msa0223950 | MtrunA17_Chr8g0360551 | 43.056 | 72 | 41 | 0 | 35 | 106 | 70 | 141 | 1.93e-12 | 62.8 |
Msa0223950 | MtrunA17_Chr8g0375101 | 36.145 | 83 | 52 | 1 | 35 | 117 | 1 | 82 | 7.07e-12 | 61.2 |
Msa0223950 | MtrunA17_Chr1g0177101 | 37.349 | 83 | 51 | 1 | 36 | 117 | 205 | 287 | 9.56e-12 | 60.5 |
Msa0223950 | MtrunA17_Chr1g0153871 | 36.364 | 88 | 54 | 2 | 40 | 125 | 192 | 279 | 9.84e-12 | 60.8 |
Msa0223950 | MtrunA17_Chr4g0018581 | 39.024 | 82 | 49 | 1 | 33 | 113 | 446 | 527 | 1.55e-11 | 60.5 |
Msa0223950 | MtrunA17_Chr4g0045921 | 30.769 | 91 | 61 | 1 | 35 | 125 | 160 | 248 | 2.67e-11 | 59.7 |
Msa0223950 | MtrunA17_Chr4g0045921 | 39.189 | 74 | 45 | 0 | 33 | 106 | 71 | 144 | 5.72e-11 | 58.5 |
Msa0223950 | MtrunA17_Chr4g0044541 | 37.975 | 79 | 48 | 1 | 37 | 114 | 33 | 111 | 3.97e-11 | 59.3 |
Msa0223950 | MtrunA17_Chr2g0328791 | 39.759 | 83 | 48 | 2 | 40 | 120 | 110 | 192 | 4.07e-11 | 58.9 |
Msa0223950 | MtrunA17_Chr5g0402191 | 36.145 | 83 | 52 | 1 | 35 | 117 | 1 | 82 | 7.19e-11 | 58.5 |
Msa0223950 | MtrunA17_Chr8g0383661 | 34.615 | 78 | 50 | 1 | 39 | 115 | 304 | 381 | 8.67e-11 | 58.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0223950 | AT3G23830.2 | 59.350 | 123 | 45 | 4 | 1 | 122 | 1 | 119 | 3.73e-44 | 141 |
Msa0223950 | AT3G23830.1 | 59.350 | 123 | 45 | 4 | 1 | 122 | 1 | 119 | 3.73e-44 | 141 |
Msa0223950 | AT4G13850.4 | 62.393 | 117 | 40 | 3 | 1 | 116 | 1 | 114 | 5.07e-43 | 138 |
Msa0223950 | AT4G13850.3 | 60.976 | 123 | 43 | 4 | 1 | 122 | 1 | 119 | 5.57e-43 | 139 |
Msa0223950 | AT4G13850.2 | 60.976 | 123 | 43 | 4 | 1 | 122 | 1 | 119 | 7.30e-43 | 139 |
Msa0223950 | AT4G13850.1 | 60.976 | 123 | 43 | 4 | 1 | 122 | 1 | 119 | 8.48e-43 | 139 |
Msa0223950 | AT5G61030.2 | 55.462 | 119 | 50 | 2 | 1 | 116 | 1 | 119 | 7.59e-40 | 135 |
Msa0223950 | AT5G61030.1 | 55.462 | 119 | 50 | 2 | 1 | 116 | 1 | 119 | 7.59e-40 | 135 |
Msa0223950 | AT1G74230.1 | 53.043 | 115 | 50 | 1 | 1 | 115 | 1 | 111 | 4.89e-37 | 127 |
Msa0223950 | AT5G47320.1 | 55.172 | 116 | 44 | 3 | 1 | 115 | 1 | 109 | 1.16e-33 | 117 |
Msa0223950 | AT3G08000.1 | 58.333 | 84 | 34 | 1 | 39 | 121 | 42 | 125 | 1.42e-27 | 99.8 |
Msa0223950 | AT5G06210.1 | 50.000 | 96 | 45 | 2 | 33 | 127 | 29 | 122 | 1.78e-23 | 89.4 |
Msa0223950 | AT2G21660.2 | 48.684 | 76 | 38 | 1 | 39 | 113 | 9 | 84 | 2.34e-21 | 84.3 |
Msa0223950 | AT5G59865.1 | 47.191 | 89 | 46 | 1 | 36 | 123 | 24 | 112 | 3.20e-21 | 82.4 |
Msa0223950 | AT2G21660.1 | 48.684 | 76 | 38 | 1 | 39 | 113 | 9 | 84 | 3.48e-21 | 84.3 |
Msa0223950 | AT2G37220.1 | 53.165 | 79 | 36 | 1 | 39 | 116 | 205 | 283 | 5.46e-21 | 85.9 |
Msa0223950 | AT2G37220.1 | 41.860 | 86 | 43 | 2 | 39 | 123 | 92 | 171 | 3.68e-12 | 62.0 |
Msa0223950 | AT3G53460.1 | 50.602 | 83 | 40 | 1 | 39 | 120 | 258 | 340 | 1.73e-20 | 85.5 |
Msa0223950 | AT3G53460.1 | 43.023 | 86 | 42 | 2 | 39 | 123 | 100 | 179 | 5.92e-11 | 58.9 |
Msa0223950 | AT3G53460.3 | 50.602 | 83 | 40 | 1 | 39 | 120 | 258 | 340 | 1.73e-20 | 85.5 |
Msa0223950 | AT3G53460.3 | 43.023 | 86 | 42 | 2 | 39 | 123 | 100 | 179 | 5.92e-11 | 58.9 |
Msa0223950 | AT3G53460.2 | 50.602 | 83 | 40 | 1 | 39 | 120 | 258 | 340 | 1.73e-20 | 85.5 |
Msa0223950 | AT3G53460.2 | 43.023 | 86 | 42 | 2 | 39 | 123 | 100 | 179 | 5.92e-11 | 58.9 |
Msa0223950 | AT4G39260.3 | 40.000 | 95 | 47 | 2 | 39 | 132 | 7 | 92 | 1.92e-20 | 80.1 |
Msa0223950 | AT3G53460.4 | 50.602 | 83 | 40 | 1 | 39 | 120 | 279 | 361 | 2.01e-20 | 85.5 |
Msa0223950 | AT1G18630.1 | 40.000 | 115 | 63 | 3 | 1 | 114 | 4 | 113 | 1.71e-19 | 79.3 |
Msa0223950 | AT4G24770.1 | 47.126 | 87 | 42 | 2 | 39 | 124 | 245 | 328 | 1.00e-18 | 80.5 |
Msa0223950 | AT4G24770.1 | 39.000 | 100 | 57 | 2 | 25 | 123 | 137 | 233 | 3.50e-12 | 62.4 |
Msa0223950 | AT4G24770.2 | 47.126 | 87 | 42 | 2 | 39 | 124 | 245 | 328 | 1.00e-18 | 80.5 |
Msa0223950 | AT4G24770.2 | 39.000 | 100 | 57 | 2 | 25 | 123 | 137 | 233 | 3.50e-12 | 62.4 |
Msa0223950 | AT3G26420.1 | 45.882 | 85 | 45 | 1 | 39 | 122 | 8 | 92 | 1.16e-18 | 79.0 |
Msa0223950 | AT5G50250.1 | 44.304 | 79 | 43 | 1 | 39 | 116 | 208 | 286 | 6.68e-18 | 77.8 |
Msa0223950 | AT5G50250.1 | 43.678 | 87 | 45 | 2 | 38 | 123 | 113 | 196 | 9.93e-13 | 63.5 |
Msa0223950 | AT2G37510.1 | 48.052 | 77 | 39 | 1 | 35 | 110 | 31 | 107 | 7.27e-18 | 74.7 |
Msa0223950 | AT4G39260.2 | 40.789 | 76 | 44 | 1 | 39 | 113 | 7 | 82 | 2.14e-17 | 73.2 |
Msa0223950 | AT4G39260.1 | 40.789 | 76 | 44 | 1 | 39 | 113 | 7 | 82 | 5.68e-17 | 73.2 |
Msa0223950 | AT1G60000.1 | 48.193 | 83 | 42 | 1 | 36 | 117 | 175 | 257 | 6.54e-17 | 74.7 |
Msa0223950 | AT4G13860.1 | 46.667 | 75 | 39 | 1 | 37 | 110 | 2 | 76 | 7.97e-17 | 70.5 |
Msa0223950 | AT3G46020.1 | 42.500 | 80 | 45 | 1 | 37 | 115 | 6 | 85 | 2.31e-16 | 69.7 |
Msa0223950 | AT5G54580.1 | 42.683 | 82 | 46 | 1 | 37 | 117 | 55 | 136 | 5.36e-16 | 70.1 |
Msa0223950 | AT3G20930.1 | 36.842 | 95 | 59 | 1 | 35 | 128 | 279 | 373 | 1.01e-15 | 72.4 |
Msa0223950 | AT1G76460.1 | 38.462 | 91 | 53 | 1 | 38 | 128 | 24 | 111 | 1.30e-15 | 71.6 |
Msa0223950 | AT5G55550.5 | 43.038 | 79 | 44 | 1 | 39 | 117 | 7 | 84 | 2.99e-15 | 71.2 |
Msa0223950 | AT5G55550.4 | 43.038 | 79 | 44 | 1 | 39 | 117 | 7 | 84 | 2.99e-15 | 71.2 |
Msa0223950 | AT5G55550.9 | 43.038 | 79 | 44 | 1 | 39 | 117 | 7 | 84 | 2.99e-15 | 71.2 |
Msa0223950 | AT5G55550.7 | 43.038 | 79 | 44 | 1 | 39 | 117 | 7 | 84 | 2.99e-15 | 71.2 |
Msa0223950 | AT5G55550.1 | 43.038 | 79 | 44 | 1 | 39 | 117 | 7 | 84 | 2.99e-15 | 71.2 |
Msa0223950 | AT5G55550.2 | 43.038 | 79 | 44 | 1 | 39 | 117 | 7 | 84 | 3.20e-15 | 71.2 |
Msa0223950 | AT5G55550.3 | 43.038 | 79 | 44 | 1 | 39 | 117 | 7 | 84 | 3.20e-15 | 71.2 |
Msa0223950 | AT5G55550.6 | 43.038 | 79 | 44 | 1 | 39 | 117 | 7 | 84 | 3.20e-15 | 71.2 |
Msa0223950 | AT5G55550.11 | 43.038 | 79 | 44 | 1 | 39 | 117 | 7 | 84 | 3.20e-15 | 71.2 |
Msa0223950 | AT3G52380.1 | 41.573 | 89 | 51 | 1 | 36 | 123 | 217 | 305 | 3.32e-15 | 70.9 |
Msa0223950 | AT5G55550.8 | 45.714 | 70 | 37 | 1 | 39 | 108 | 7 | 75 | 8.07e-15 | 70.1 |
Msa0223950 | AT5G55550.10 | 45.714 | 70 | 37 | 1 | 39 | 108 | 7 | 75 | 8.44e-15 | 70.1 |
Msa0223950 | AT1G60650.2 | 38.000 | 100 | 57 | 2 | 37 | 131 | 11 | 110 | 8.81e-15 | 69.3 |
Msa0223950 | AT1G60650.1 | 38.000 | 100 | 57 | 2 | 37 | 131 | 11 | 110 | 8.81e-15 | 69.3 |
Msa0223950 | AT2G22100.1 | 37.778 | 90 | 56 | 0 | 33 | 122 | 158 | 247 | 1.26e-14 | 69.3 |
Msa0223950 | AT1G54080.1 | 43.038 | 79 | 44 | 1 | 36 | 113 | 146 | 224 | 1.80e-14 | 68.9 |
Msa0223950 | AT1G22910.1 | 38.961 | 77 | 47 | 0 | 38 | 114 | 13 | 89 | 1.92e-14 | 67.8 |
Msa0223950 | AT1G22910.2 | 38.961 | 77 | 47 | 0 | 38 | 114 | 13 | 89 | 1.96e-14 | 67.8 |
Msa0223950 | AT2G46780.1 | 37.234 | 94 | 54 | 1 | 38 | 126 | 22 | 115 | 2.05e-14 | 68.6 |
Msa0223950 | AT2G46780.2 | 37.234 | 94 | 54 | 1 | 38 | 126 | 22 | 115 | 2.05e-14 | 68.6 |
Msa0223950 | AT1G33470.2 | 42.029 | 69 | 40 | 0 | 38 | 106 | 7 | 75 | 2.10e-14 | 67.8 |
Msa0223950 | AT1G33470.1 | 39.474 | 76 | 46 | 0 | 38 | 113 | 7 | 82 | 2.21e-14 | 67.8 |
Msa0223950 | AT3G07810.1 | 41.026 | 78 | 45 | 1 | 39 | 116 | 7 | 83 | 2.25e-14 | 68.9 |
Msa0223950 | AT3G07810.2 | 41.026 | 78 | 45 | 1 | 39 | 116 | 7 | 83 | 2.30e-14 | 68.9 |
Msa0223950 | AT1G33470.3 | 39.474 | 76 | 46 | 0 | 38 | 113 | 7 | 82 | 2.36e-14 | 67.4 |
Msa0223950 | AT3G14100.1 | 44.000 | 75 | 41 | 1 | 40 | 113 | 146 | 220 | 2.66e-14 | 68.6 |
Msa0223950 | AT5G04280.1 | 39.744 | 78 | 46 | 1 | 38 | 114 | 7 | 84 | 2.97e-14 | 68.2 |
Msa0223950 | AT2G18510.1 | 41.573 | 89 | 50 | 2 | 38 | 124 | 112 | 200 | 2.97e-14 | 68.2 |
Msa0223950 | AT1G48920.1 | 39.000 | 100 | 56 | 1 | 37 | 131 | 296 | 395 | 3.30e-14 | 68.6 |
Msa0223950 | AT4G26650.1 | 42.308 | 78 | 44 | 1 | 39 | 116 | 16 | 92 | 3.51e-14 | 68.2 |
Msa0223950 | AT4G26650.1 | 31.034 | 87 | 60 | 0 | 37 | 123 | 121 | 207 | 2.81e-11 | 60.1 |
Msa0223950 | AT4G26650.2 | 42.308 | 78 | 44 | 1 | 39 | 116 | 13 | 89 | 3.68e-14 | 68.2 |
Msa0223950 | AT4G26650.2 | 31.034 | 87 | 60 | 0 | 37 | 123 | 118 | 204 | 2.97e-11 | 60.1 |
Msa0223950 | AT1G20880.2 | 38.961 | 77 | 47 | 0 | 38 | 114 | 24 | 100 | 4.08e-14 | 67.4 |
Msa0223950 | AT1G20880.3 | 38.961 | 77 | 47 | 0 | 38 | 114 | 24 | 100 | 4.08e-14 | 67.4 |
Msa0223950 | AT1G20880.1 | 38.961 | 77 | 47 | 0 | 38 | 114 | 24 | 100 | 4.08e-14 | 67.4 |
Msa0223950 | AT1G22910.3 | 38.961 | 77 | 47 | 0 | 38 | 114 | 13 | 89 | 5.19e-14 | 67.4 |
Msa0223950 | AT1G22330.1 | 36.559 | 93 | 56 | 1 | 38 | 130 | 17 | 106 | 5.91e-14 | 67.0 |
Msa0223950 | AT4G13860.2 | 53.448 | 58 | 26 | 1 | 54 | 110 | 2 | 59 | 6.82e-14 | 62.4 |
Msa0223950 | AT5G47620.1 | 39.759 | 83 | 49 | 1 | 34 | 116 | 2 | 83 | 7.42e-14 | 67.4 |
Msa0223950 | AT5G47620.1 | 33.333 | 78 | 52 | 0 | 36 | 113 | 104 | 181 | 3.12e-11 | 59.7 |
Msa0223950 | AT5G47620.2 | 39.759 | 83 | 49 | 1 | 34 | 116 | 2 | 83 | 7.42e-14 | 67.4 |
Msa0223950 | AT5G47620.2 | 33.333 | 78 | 52 | 0 | 36 | 113 | 104 | 181 | 3.12e-11 | 59.7 |
Msa0223950 | AT5G47620.5 | 39.759 | 83 | 49 | 1 | 34 | 116 | 2 | 83 | 7.42e-14 | 67.4 |
Msa0223950 | AT5G47620.5 | 33.333 | 78 | 52 | 0 | 36 | 113 | 104 | 181 | 3.12e-11 | 59.7 |
Msa0223950 | AT1G78260.1 | 36.364 | 77 | 49 | 0 | 38 | 114 | 17 | 93 | 9.50e-14 | 66.2 |
Msa0223950 | AT5G47620.4 | 53.704 | 54 | 25 | 0 | 34 | 87 | 2 | 55 | 1.38e-13 | 66.6 |
Msa0223950 | AT5G47620.4 | 33.333 | 78 | 52 | 0 | 36 | 113 | 126 | 203 | 3.28e-11 | 59.7 |
Msa0223950 | AT4G39260.4 | 38.983 | 59 | 36 | 0 | 39 | 97 | 7 | 65 | 1.53e-13 | 62.8 |
Msa0223950 | AT1G78260.2 | 36.364 | 77 | 49 | 0 | 38 | 114 | 17 | 93 | 1.57e-13 | 65.9 |
Msa0223950 | AT3G13224.3 | 36.667 | 90 | 56 | 1 | 30 | 118 | 92 | 181 | 2.49e-13 | 65.5 |
Msa0223950 | AT3G13224.2 | 36.667 | 90 | 56 | 1 | 30 | 118 | 101 | 190 | 2.96e-13 | 65.5 |
Msa0223950 | AT3G54770.3 | 36.364 | 77 | 49 | 0 | 38 | 114 | 17 | 93 | 3.24e-13 | 64.7 |
Msa0223950 | AT2G27330.1 | 31.579 | 95 | 64 | 1 | 37 | 130 | 20 | 114 | 3.39e-13 | 62.0 |
Msa0223950 | AT3G13224.1 | 45.588 | 68 | 37 | 0 | 30 | 97 | 101 | 168 | 3.42e-13 | 64.3 |
Msa0223950 | AT3G54770.1 | 36.364 | 77 | 49 | 0 | 38 | 114 | 17 | 93 | 3.54e-13 | 64.7 |
Msa0223950 | AT1G17640.2 | 34.694 | 98 | 61 | 2 | 36 | 131 | 155 | 251 | 4.28e-13 | 65.1 |
Msa0223950 | AT1G17640.1 | 34.694 | 98 | 61 | 2 | 36 | 131 | 155 | 251 | 4.28e-13 | 65.1 |
Msa0223950 | AT1G17640.3 | 34.694 | 98 | 61 | 2 | 36 | 131 | 155 | 251 | 4.28e-13 | 65.1 |
Msa0223950 | AT2G21690.1 | 39.437 | 71 | 42 | 1 | 41 | 110 | 10 | 80 | 5.86e-13 | 61.2 |
Msa0223950 | AT1G17370.2 | 44.000 | 75 | 41 | 1 | 40 | 113 | 141 | 215 | 9.69e-13 | 63.9 |
Msa0223950 | AT1G71800.1 | 35.443 | 79 | 49 | 2 | 40 | 116 | 11 | 89 | 1.06e-12 | 63.9 |
Msa0223950 | AT1G17370.1 | 44.000 | 75 | 41 | 1 | 40 | 113 | 141 | 215 | 1.06e-12 | 63.9 |
Msa0223950 | AT4G14300.1 | 40.506 | 79 | 46 | 1 | 39 | 117 | 7 | 84 | 1.25e-12 | 63.9 |
Msa0223950 | AT4G14300.1 | 34.146 | 82 | 54 | 0 | 37 | 118 | 109 | 190 | 4.56e-12 | 62.0 |
Msa0223950 | AT4G14300.2 | 40.506 | 79 | 46 | 1 | 39 | 117 | 7 | 84 | 1.25e-12 | 63.9 |
Msa0223950 | AT4G14300.2 | 34.146 | 82 | 54 | 0 | 37 | 118 | 109 | 190 | 4.56e-12 | 62.0 |
Msa0223950 | AT1G49760.1 | 43.590 | 78 | 43 | 1 | 37 | 113 | 44 | 121 | 1.36e-12 | 63.9 |
Msa0223950 | AT1G49760.2 | 43.590 | 78 | 43 | 1 | 37 | 113 | 44 | 121 | 1.36e-12 | 63.9 |
Msa0223950 | AT1G01080.1 | 37.975 | 79 | 49 | 0 | 32 | 110 | 206 | 284 | 1.43e-12 | 63.2 |
Msa0223950 | AT2G33410.1 | 31.579 | 114 | 72 | 1 | 11 | 118 | 77 | 190 | 1.45e-12 | 63.5 |
Msa0223950 | AT2G33410.1 | 37.349 | 83 | 51 | 1 | 39 | 121 | 7 | 88 | 2.08e-12 | 63.2 |
Msa0223950 | AT1G01080.2 | 37.975 | 79 | 49 | 0 | 32 | 110 | 207 | 285 | 1.59e-12 | 63.2 |
Msa0223950 | AT1G54080.2 | 40.964 | 83 | 44 | 2 | 36 | 113 | 146 | 228 | 1.93e-12 | 63.2 |
Msa0223950 | AT4G00830.2 | 34.783 | 92 | 57 | 2 | 26 | 116 | 106 | 195 | 2.29e-12 | 63.2 |
Msa0223950 | AT4G00830.1 | 34.783 | 92 | 57 | 2 | 26 | 116 | 106 | 195 | 2.29e-12 | 63.2 |
Msa0223950 | AT4G00830.6 | 34.783 | 92 | 57 | 2 | 26 | 116 | 106 | 195 | 2.29e-12 | 63.2 |
Msa0223950 | AT4G00830.3 | 34.783 | 92 | 57 | 2 | 26 | 116 | 106 | 195 | 2.30e-12 | 63.2 |
Msa0223950 | AT4G00830.5 | 34.783 | 92 | 57 | 2 | 26 | 116 | 106 | 195 | 2.30e-12 | 63.2 |
Msa0223950 | AT2G37510.2 | 36.275 | 102 | 39 | 2 | 35 | 110 | 31 | 132 | 2.91e-12 | 60.8 |
Msa0223950 | AT2G19380.1 | 33.333 | 84 | 56 | 0 | 33 | 116 | 403 | 486 | 2.95e-12 | 62.8 |
Msa0223950 | AT5G11412.1 | 34.211 | 76 | 50 | 0 | 38 | 113 | 52 | 127 | 3.20e-12 | 60.8 |
Msa0223950 | AT5G53720.1 | 36.364 | 77 | 49 | 0 | 37 | 113 | 8 | 84 | 3.91e-12 | 58.9 |
Msa0223950 | AT4G03110.1 | 36.471 | 85 | 53 | 1 | 38 | 121 | 349 | 433 | 4.31e-12 | 62.4 |
Msa0223950 | AT1G73530.1 | 33.333 | 81 | 53 | 1 | 37 | 116 | 76 | 156 | 4.77e-12 | 60.5 |
Msa0223950 | AT4G20030.1 | 34.286 | 105 | 60 | 4 | 26 | 125 | 31 | 131 | 5.74e-12 | 59.7 |
Msa0223950 | AT3G18610.1 | 39.535 | 86 | 49 | 2 | 37 | 122 | 383 | 465 | 6.25e-12 | 62.0 |
Msa0223950 | AT5G53680.1 | 34.615 | 78 | 49 | 1 | 38 | 113 | 13 | 90 | 8.99e-12 | 59.3 |
Msa0223950 | AT3G18610.3 | 39.535 | 86 | 49 | 2 | 37 | 122 | 353 | 435 | 9.69e-12 | 61.2 |
Msa0223950 | AT1G03457.3 | 34.177 | 79 | 51 | 1 | 38 | 115 | 225 | 303 | 1.02e-11 | 60.8 |
Msa0223950 | AT1G47490.2 | 37.234 | 94 | 57 | 2 | 40 | 131 | 199 | 292 | 1.25e-11 | 60.8 |
Msa0223950 | AT3G18610.2 | 39.535 | 86 | 49 | 2 | 37 | 122 | 323 | 405 | 1.31e-11 | 60.8 |
Msa0223950 | AT5G51300.1 | 36.585 | 82 | 51 | 1 | 33 | 113 | 475 | 556 | 1.71e-11 | 60.8 |
Msa0223950 | AT5G51300.2 | 36.585 | 82 | 51 | 1 | 33 | 113 | 475 | 556 | 1.71e-11 | 60.8 |
Msa0223950 | AT5G51300.3 | 36.585 | 82 | 51 | 1 | 33 | 113 | 475 | 556 | 1.71e-11 | 60.8 |
Msa0223950 | AT1G47490.1 | 37.234 | 94 | 57 | 2 | 40 | 131 | 199 | 292 | 2.16e-11 | 60.5 |
Msa0223950 | AT5G47620.3 | 33.766 | 77 | 51 | 0 | 37 | 113 | 45 | 121 | 2.25e-11 | 60.1 |
Msa0223950 | AT3G15010.1 | 40.278 | 72 | 43 | 0 | 35 | 106 | 72 | 143 | 3.18e-11 | 59.7 |
Msa0223950 | AT3G15010.2 | 40.278 | 72 | 43 | 0 | 35 | 106 | 72 | 143 | 3.18e-11 | 59.7 |
Msa0223950 | AT5G54900.1 | 39.506 | 81 | 47 | 2 | 40 | 118 | 156 | 236 | 3.32e-11 | 59.7 |
Msa0223950 | AT5G40490.2 | 32.927 | 82 | 54 | 1 | 37 | 117 | 112 | 193 | 3.44e-11 | 59.7 |
Msa0223950 | AT1G13690.1 | 37.333 | 75 | 46 | 1 | 40 | 113 | 15 | 89 | 3.70e-11 | 58.2 |
Msa0223950 | AT3G10400.1 | 37.975 | 79 | 48 | 1 | 38 | 115 | 57 | 135 | 4.90e-11 | 58.9 |
Msa0223950 | AT1G47500.2 | 36.170 | 94 | 58 | 2 | 40 | 131 | 201 | 294 | 7.92e-11 | 58.5 |
Msa0223950 | AT1G47500.1 | 36.170 | 94 | 58 | 2 | 40 | 131 | 201 | 294 | 9.05e-11 | 58.5 |
Find 45 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGGATGGACAGGATTTAAA+TGG | 0.218034 | 2_1:-73684508 | Msa0223950:CDS |
ACTGGAAGATCAAGGGGATT+TGG | 0.334462 | 2_1:-73684577 | Msa0223950:CDS |
ATGGGTTTCTGTAACAAGAT+TGG | 0.366720 | 2_1:-73684799 | Msa0223950:CDS |
TGCAACTTCAGCACTCTCTA+TGG | 0.384662 | 2_1:-73684527 | Msa0223950:CDS |
GTGGCTATGGCGGCGGTGGT+TGG | 0.402510 | 2_1:-73684426 | Msa0223950:CDS |
GAGGAGGAGCTTGAGTGCTC+TGG | 0.408995 | 2_1:+73684752 | None:intergenic |
TGTTGATGATCAGTCTCTTA+AGG | 0.437494 | 2_1:-73684656 | Msa0223950:CDS |
CCTCGTCCCGGAGGTGGCTA+TGG | 0.454161 | 2_1:-73684439 | Msa0223950:CDS |
TAGTTAAGCATGGATGAAAC+AGG | 0.461015 | 2_1:+73684730 | None:intergenic |
ACCGCCGCCATAGCCACCTC+CGG | 0.464601 | 2_1:+73684432 | None:intergenic |
AGCACTCTCTATGGATGGAC+AGG | 0.475981 | 2_1:-73684518 | Msa0223950:CDS |
GGTGGACCTCGTCCCGGAGG+TGG | 0.479282 | 2_1:-73684445 | Msa0223950:CDS |
GGAGGTGGCTATGGCGGCGG+TGG | 0.485306 | 2_1:-73684430 | Msa0223950:CDS |
CCCGGAGGTGGCTATGGCGG+CGG | 0.489224 | 2_1:-73684433 | Msa0223950:CDS |
GATCATCAACATGGTAAGAA+AGG | 0.505312 | 2_1:+73684668 | None:intergenic |
CCATAGCCACCTCCGGGACG+AGG | 0.515742 | 2_1:+73684439 | None:intergenic |
ATAGAGACACTGGAAGATCA+AGG | 0.517492 | 2_1:-73684585 | Msa0223950:CDS |
AGGAGGAGCTTGAGTGCTCT+GGG | 0.530346 | 2_1:+73684753 | None:intergenic |
CAGGCTGGTGGACCTCGTCC+CGG | 0.532193 | 2_1:-73684451 | Msa0223950:CDS |
TGGATGGACAGGATTTAAAT+GGG | 0.532473 | 2_1:-73684507 | Msa0223950:CDS |
AAGGATGCATTTACAACCTA+CGG | 0.532917 | 2_1:-73684637 | Msa0223950:CDS |
GGGTACCACCTTGCCTCAAG+AGG | 0.543148 | 2_1:+73684773 | None:intergenic |
GTCCTATGCAAATGATAGAC+AGG | 0.554294 | 2_1:-73684470 | Msa0223950:CDS |
CCGCCGCCATAGCCACCTCC+GGG | 0.576120 | 2_1:+73684433 | None:intergenic |
GTTATCACTGATAGAGACAC+TGG | 0.581409 | 2_1:-73684595 | Msa0223950:CDS |
ACTTCAGCACTCTCTATGGA+TGG | 0.581897 | 2_1:-73684523 | Msa0223950:CDS |
TATGCAAATGATAGACAGGC+TGG | 0.581925 | 2_1:-73684466 | Msa0223950:CDS |
TGCCTCAACCACTTCTCCGT+AGG | 0.589946 | 2_1:+73684621 | None:intergenic |
TAGAGACACTGGAAGATCAA+GGG | 0.594765 | 2_1:-73684584 | Msa0223950:CDS |
CGTCCCGGAGGTGGCTATGG+CGG | 0.599295 | 2_1:-73684436 | Msa0223950:CDS |
AGAGACACTGGAAGATCAAG+GGG | 0.604078 | 2_1:-73684583 | Msa0223950:CDS |
ATTTACAACCTACGGAGAAG+TGG | 0.607456 | 2_1:-73684629 | Msa0223950:CDS |
AGCATGGATGAAACAGGAGG+AGG | 0.619418 | 2_1:+73684736 | None:intergenic |
AACCTACGGAGAAGTGGTTG+AGG | 0.621999 | 2_1:-73684623 | Msa0223950:CDS |
GTGGCGCAAGTAGTTAAGCA+TGG | 0.622132 | 2_1:+73684720 | None:intergenic |
ATTGGAAACCTCTTGAGGCA+AGG | 0.631105 | 2_1:-73684781 | Msa0223950:CDS |
TGAAGTTGCAGACTCTTGAG+TGG | 0.654691 | 2_1:+73684540 | None:intergenic |
AGCCTGTCTATCATTTGCAT+AGG | 0.655393 | 2_1:+73684468 | None:intergenic |
ACAAGATTGGAAACCTCTTG+AGG | 0.658250 | 2_1:-73684786 | Msa0223950:CDS |
GCAAATGATAGACAGGCTGG+TGG | 0.673979 | 2_1:-73684463 | Msa0223950:CDS |
GCTGGTGGACCTCGTCCCGG+AGG | 0.683775 | 2_1:-73684448 | Msa0223950:CDS |
GGAAACCTCTTGAGGCAAGG+TGG | 0.688707 | 2_1:-73684778 | Msa0223950:CDS |
TAAGAGACTGATCATCAACA+TGG | 0.702631 | 2_1:+73684659 | None:intergenic |
TTAAGCATGGATGAAACAGG+AGG | 0.710474 | 2_1:+73684733 | None:intergenic |
AAAGCTTGCTTGAAGACATG+TGG | 0.718559 | 2_1:+73684701 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
ATGGGTTTCTGTAACAAGAT+TGG | - | chr2_1:73684423-73684442 | Msa0223950:CDS | 35.0% | |
TAGTTAAGCATGGATGAAAC+AGG | + | chr2_1:73684495-73684514 | None:intergenic | 35.0% | |
! | TCTTCAAGCAAGCTTTTCAT+TGG | - | chr2_1:73684528-73684547 | Msa0223950:CDS | 35.0% |
GATCATCAACATGGTAAGAA+AGG | + | chr2_1:73684557-73684576 | None:intergenic | 35.0% | |
TAAGAGACTGATCATCAACA+TGG | + | chr2_1:73684566-73684585 | None:intergenic | 35.0% | |
!! | TGTTGATGATCAGTCTCTTA+AGG | - | chr2_1:73684566-73684585 | Msa0223950:CDS | 35.0% |
AAGGATGCATTTACAACCTA+CGG | - | chr2_1:73684585-73684604 | Msa0223950:CDS | 35.0% | |
ATGGATGGACAGGATTTAAA+TGG | - | chr2_1:73684714-73684733 | Msa0223950:CDS | 35.0% | |
TGGATGGACAGGATTTAAAT+GGG | - | chr2_1:73684715-73684734 | Msa0223950:CDS | 35.0% | |
ATGGGTTTCTGTAACAAGAT+TGG | - | chr2_1:73684423-73684442 | Msa0223950:CDS | 35.0% | |
TAGTTAAGCATGGATGAAAC+AGG | + | chr2_1:73684495-73684514 | None:intergenic | 35.0% | |
! | TCTTCAAGCAAGCTTTTCAT+TGG | - | chr2_1:73684528-73684547 | Msa0223950:CDS | 35.0% |
GATCATCAACATGGTAAGAA+AGG | + | chr2_1:73684557-73684576 | None:intergenic | 35.0% | |
TAAGAGACTGATCATCAACA+TGG | + | chr2_1:73684566-73684585 | None:intergenic | 35.0% | |
!! | TGTTGATGATCAGTCTCTTA+AGG | - | chr2_1:73684566-73684585 | Msa0223950:CDS | 35.0% |
AAGGATGCATTTACAACCTA+CGG | - | chr2_1:73684585-73684604 | Msa0223950:CDS | 35.0% | |
ATGGATGGACAGGATTTAAA+TGG | - | chr2_1:73684714-73684733 | Msa0223950:CDS | 35.0% | |
TGGATGGACAGGATTTAAAT+GGG | - | chr2_1:73684715-73684734 | Msa0223950:CDS | 35.0% | |
ACAAGATTGGAAACCTCTTG+AGG | - | chr2_1:73684436-73684455 | Msa0223950:CDS | 40.0% | |
TTAAGCATGGATGAAACAGG+AGG | + | chr2_1:73684492-73684511 | None:intergenic | 40.0% | |
! | AAAGCTTGCTTGAAGACATG+TGG | + | chr2_1:73684524-73684543 | None:intergenic | 40.0% |
! | TCAAGCAAGCTTTTCATTGG+AGG | - | chr2_1:73684531-73684550 | Msa0223950:CDS | 40.0% |
ATTTACAACCTACGGAGAAG+TGG | - | chr2_1:73684593-73684612 | Msa0223950:CDS | 40.0% | |
GTTATCACTGATAGAGACAC+TGG | - | chr2_1:73684627-73684646 | Msa0223950:CDS | 40.0% | |
ATAGAGACACTGGAAGATCA+AGG | - | chr2_1:73684637-73684656 | Msa0223950:CDS | 40.0% | |
TAGAGACACTGGAAGATCAA+GGG | - | chr2_1:73684638-73684657 | Msa0223950:CDS | 40.0% | |
GTCCTATGCAAATGATAGAC+AGG | - | chr2_1:73684752-73684771 | Msa0223950:CDS | 40.0% | |
AGCCTGTCTATCATTTGCAT+AGG | + | chr2_1:73684757-73684776 | None:intergenic | 40.0% | |
TATGCAAATGATAGACAGGC+TGG | - | chr2_1:73684756-73684775 | Msa0223950:CDS | 40.0% | |
ACAAGATTGGAAACCTCTTG+AGG | - | chr2_1:73684436-73684455 | Msa0223950:CDS | 40.0% | |
TTAAGCATGGATGAAACAGG+AGG | + | chr2_1:73684492-73684511 | None:intergenic | 40.0% | |
! | AAAGCTTGCTTGAAGACATG+TGG | + | chr2_1:73684524-73684543 | None:intergenic | 40.0% |
! | TCAAGCAAGCTTTTCATTGG+AGG | - | chr2_1:73684531-73684550 | Msa0223950:CDS | 40.0% |
ATTTACAACCTACGGAGAAG+TGG | - | chr2_1:73684593-73684612 | Msa0223950:CDS | 40.0% | |
GTTATCACTGATAGAGACAC+TGG | - | chr2_1:73684627-73684646 | Msa0223950:CDS | 40.0% | |
ATAGAGACACTGGAAGATCA+AGG | - | chr2_1:73684637-73684656 | Msa0223950:CDS | 40.0% | |
TAGAGACACTGGAAGATCAA+GGG | - | chr2_1:73684638-73684657 | Msa0223950:CDS | 40.0% | |
GTCCTATGCAAATGATAGAC+AGG | - | chr2_1:73684752-73684771 | Msa0223950:CDS | 40.0% | |
AGCCTGTCTATCATTTGCAT+AGG | + | chr2_1:73684757-73684776 | None:intergenic | 40.0% | |
TATGCAAATGATAGACAGGC+TGG | - | chr2_1:73684756-73684775 | Msa0223950:CDS | 40.0% | |
ATTGGAAACCTCTTGAGGCA+AGG | - | chr2_1:73684441-73684460 | Msa0223950:CDS | 45.0% | |
AGAGACACTGGAAGATCAAG+GGG | - | chr2_1:73684639-73684658 | Msa0223950:CDS | 45.0% | |
ACTGGAAGATCAAGGGGATT+TGG | - | chr2_1:73684645-73684664 | Msa0223950:CDS | 45.0% | |
TGAAGTTGCAGACTCTTGAG+TGG | + | chr2_1:73684685-73684704 | None:intergenic | 45.0% | |
TGCAACTTCAGCACTCTCTA+TGG | - | chr2_1:73684695-73684714 | Msa0223950:CDS | 45.0% | |
ACTTCAGCACTCTCTATGGA+TGG | - | chr2_1:73684699-73684718 | Msa0223950:CDS | 45.0% | |
ATTGGAAACCTCTTGAGGCA+AGG | - | chr2_1:73684441-73684460 | Msa0223950:CDS | 45.0% | |
AGAGACACTGGAAGATCAAG+GGG | - | chr2_1:73684639-73684658 | Msa0223950:CDS | 45.0% | |
ACTGGAAGATCAAGGGGATT+TGG | - | chr2_1:73684645-73684664 | Msa0223950:CDS | 45.0% | |
TGAAGTTGCAGACTCTTGAG+TGG | + | chr2_1:73684685-73684704 | None:intergenic | 45.0% | |
TGCAACTTCAGCACTCTCTA+TGG | - | chr2_1:73684695-73684714 | Msa0223950:CDS | 45.0% | |
ACTTCAGCACTCTCTATGGA+TGG | - | chr2_1:73684699-73684718 | Msa0223950:CDS | 45.0% | |
AGCATGGATGAAACAGGAGG+AGG | + | chr2_1:73684489-73684508 | None:intergenic | 50.0% | |
GTGGCGCAAGTAGTTAAGCA+TGG | + | chr2_1:73684505-73684524 | None:intergenic | 50.0% | |
AACCTACGGAGAAGTGGTTG+AGG | - | chr2_1:73684599-73684618 | Msa0223950:CDS | 50.0% | |
AGCACTCTCTATGGATGGAC+AGG | - | chr2_1:73684704-73684723 | Msa0223950:CDS | 50.0% | |
GCAAATGATAGACAGGCTGG+TGG | - | chr2_1:73684759-73684778 | Msa0223950:CDS | 50.0% | |
AGCATGGATGAAACAGGAGG+AGG | + | chr2_1:73684489-73684508 | None:intergenic | 50.0% | |
GTGGCGCAAGTAGTTAAGCA+TGG | + | chr2_1:73684505-73684524 | None:intergenic | 50.0% | |
AACCTACGGAGAAGTGGTTG+AGG | - | chr2_1:73684599-73684618 | Msa0223950:CDS | 50.0% | |
AGCACTCTCTATGGATGGAC+AGG | - | chr2_1:73684704-73684723 | Msa0223950:CDS | 50.0% | |
GCAAATGATAGACAGGCTGG+TGG | - | chr2_1:73684759-73684778 | Msa0223950:CDS | 50.0% | |
GGAAACCTCTTGAGGCAAGG+TGG | - | chr2_1:73684444-73684463 | Msa0223950:CDS | 55.0% | |
AGGAGGAGCTTGAGTGCTCT+GGG | + | chr2_1:73684472-73684491 | None:intergenic | 55.0% | |
TGCCTCAACCACTTCTCCGT+AGG | + | chr2_1:73684604-73684623 | None:intergenic | 55.0% | |
GGAAACCTCTTGAGGCAAGG+TGG | - | chr2_1:73684444-73684463 | Msa0223950:CDS | 55.0% | |
AGGAGGAGCTTGAGTGCTCT+GGG | + | chr2_1:73684472-73684491 | None:intergenic | 55.0% | |
TGCCTCAACCACTTCTCCGT+AGG | + | chr2_1:73684604-73684623 | None:intergenic | 55.0% | |
GGGTACCACCTTGCCTCAAG+AGG | + | chr2_1:73684452-73684471 | None:intergenic | 60.0% | |
GAGGAGGAGCTTGAGTGCTC+TGG | + | chr2_1:73684473-73684492 | None:intergenic | 60.0% | |
GGGTACCACCTTGCCTCAAG+AGG | + | chr2_1:73684452-73684471 | None:intergenic | 60.0% | |
GAGGAGGAGCTTGAGTGCTC+TGG | + | chr2_1:73684473-73684492 | None:intergenic | 60.0% | |
! | CAGGCTGGTGGACCTCGTCC+CGG | - | chr2_1:73684771-73684790 | Msa0223950:CDS | 70.0% |
CCATAGCCACCTCCGGGACG+AGG | + | chr2_1:73684786-73684805 | None:intergenic | 70.0% | |
CCTCGTCCCGGAGGTGGCTA+TGG | - | chr2_1:73684783-73684802 | Msa0223950:CDS | 70.0% | |
CGTCCCGGAGGTGGCTATGG+CGG | - | chr2_1:73684786-73684805 | Msa0223950:CDS | 70.0% | |
ACCGCCGCCATAGCCACCTC+CGG | + | chr2_1:73684793-73684812 | None:intergenic | 70.0% | |
GTGGCTATGGCGGCGGTGGT+TGG | - | chr2_1:73684796-73684815 | Msa0223950:CDS | 70.0% | |
! | CAGGCTGGTGGACCTCGTCC+CGG | - | chr2_1:73684771-73684790 | Msa0223950:CDS | 70.0% |
CCATAGCCACCTCCGGGACG+AGG | + | chr2_1:73684786-73684805 | None:intergenic | 70.0% | |
CCTCGTCCCGGAGGTGGCTA+TGG | - | chr2_1:73684783-73684802 | Msa0223950:CDS | 70.0% | |
CGTCCCGGAGGTGGCTATGG+CGG | - | chr2_1:73684786-73684805 | Msa0223950:CDS | 70.0% | |
ACCGCCGCCATAGCCACCTC+CGG | + | chr2_1:73684793-73684812 | None:intergenic | 70.0% | |
GTGGCTATGGCGGCGGTGGT+TGG | - | chr2_1:73684796-73684815 | Msa0223950:CDS | 70.0% | |
! | GCTGGTGGACCTCGTCCCGG+AGG | - | chr2_1:73684774-73684793 | Msa0223950:CDS | 75.0% |
GGTGGACCTCGTCCCGGAGG+TGG | - | chr2_1:73684777-73684796 | Msa0223950:CDS | 75.0% | |
CCGCCGCCATAGCCACCTCC+GGG | + | chr2_1:73684792-73684811 | None:intergenic | 75.0% | |
CCCGGAGGTGGCTATGGCGG+CGG | - | chr2_1:73684789-73684808 | Msa0223950:CDS | 75.0% | |
GGAGGTGGCTATGGCGGCGG+TGG | - | chr2_1:73684792-73684811 | Msa0223950:CDS | 75.0% | |
! | GCTGGTGGACCTCGTCCCGG+AGG | - | chr2_1:73684774-73684793 | Msa0223950:CDS | 75.0% |
GGTGGACCTCGTCCCGGAGG+TGG | - | chr2_1:73684777-73684796 | Msa0223950:CDS | 75.0% | |
CCGCCGCCATAGCCACCTCC+GGG | + | chr2_1:73684792-73684811 | None:intergenic | 75.0% | |
CCCGGAGGTGGCTATGGCGG+CGG | - | chr2_1:73684789-73684808 | Msa0223950:CDS | 75.0% | |
GGAGGTGGCTATGGCGGCGG+TGG | - | chr2_1:73684792-73684811 | Msa0223950:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 73684423 | 73684821 | 73684423 | ID=Msa0223950;Name=Msa0223950 |
chr2_1 | mRNA | 73684423 | 73684821 | 73684423 | ID=Msa0223950-mRNA-1;Parent=Msa0223950;Name=Msa0223950-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|-1|0|1|-1|1|1|0|132 |
chr2_1 | exon | 73684423 | 73684821 | 73684423 | ID=Msa0223950-mRNA-1:exon:21724;Parent=Msa0223950-mRNA-1 |
chr2_1 | CDS | 73684423 | 73684821 | 73684423 | ID=Msa0223950-mRNA-1:cds;Parent=Msa0223950-mRNA-1 |
Gene Sequence |
Protein sequence |