Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0228480 | XP_003608843.1 | 87.967 | 482 | 17 | 4 | 1 | 442 | 38 | 518 | 0.0 | 827 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0228480 | sp|Q9FMT4|SNF12_ARATH | 53.394 | 442 | 169 | 4 | 38 | 442 | 79 | 520 | 6.02e-163 | 475 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0228480 | G7JLF1 | 87.967 | 482 | 17 | 4 | 1 | 442 | 38 | 518 | 0.0 | 827 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0228480 | TR | SWI/SNF-BAF60b |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032370 | Msa0228480 | 0.808004 | 3.831532e-50 | -8.615850e-47 |
| Msa0140300 | Msa0228480 | 0.817984 | 2.483852e-52 | -8.615850e-47 |
| Msa0183600 | Msa0228480 | 0.802287 | 6.025279e-49 | -8.615850e-47 |
| Msa0228480 | Msa0245940 | 0.805810 | 1.115100e-49 | -8.615850e-47 |
| Msa0228480 | Msa0279790 | 0.802257 | 6.114127e-49 | -8.615850e-47 |
| Msa0228480 | Msa0281360 | 0.825705 | 4.051389e-54 | -8.615850e-47 |
| Msa0228480 | Msa0284520 | 0.811533 | 6.677337e-51 | -8.615850e-47 |
| Msa0228480 | Msa0342100 | 0.800127 | 1.667454e-48 | -8.615850e-47 |
| Msa0228480 | Msa0466390 | 0.805990 | 1.022006e-49 | -8.615850e-47 |
| Msa0228480 | Msa0489100 | 0.816199 | 6.254716e-52 | -8.615850e-47 |
| Msa0228480 | Msa0877410 | 0.803112 | 4.071242e-49 | -8.615850e-47 |
| Msa0228480 | Msa0896750 | 0.803954 | 2.724788e-49 | -8.615850e-47 |
| Msa0228480 | Msa0908050 | 0.807926 | 3.981513e-50 | -8.615850e-47 |
| Msa0228480 | Msa0993530 | 0.808378 | 3.189254e-50 | -8.615850e-47 |
| Msa0228480 | Msa1018050 | 0.812330 | 4.475110e-51 | -8.615850e-47 |
| Msa0228480 | Msa1185540 | 0.803427 | 3.503722e-49 | -8.615850e-47 |
| Msa0228480 | Msa1341070 | 0.812960 | 3.259718e-51 | -8.615850e-47 |
| Msa0228480 | Msa1362510 | 0.838489 | 2.789829e-57 | -8.615850e-47 |
| Msa0228480 | Msa1416390 | 0.804648 | 1.952553e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0228480 | MtrunA17_Chr4g0057611 | 87.967 | 482 | 17 | 4 | 1 | 442 | 38 | 518 | 0.0 | 827 |
| Msa0228480 | MtrunA17_Chr3g0116121 | 52.686 | 484 | 179 | 6 | 5 | 442 | 44 | 523 | 1.79e-165 | 479 |
| Msa0228480 | MtrunA17_Chr6g0459511 | 51.816 | 413 | 166 | 2 | 63 | 442 | 132 | 544 | 4.21e-150 | 440 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0228480 | AT5G14170.1 | 53.394 | 442 | 169 | 4 | 38 | 442 | 79 | 520 | 6.11e-164 | 475 |
| Msa0228480 | AT3G01890.1 | 50.343 | 437 | 166 | 6 | 36 | 442 | 36 | 451 | 7.25e-145 | 424 |
Find 103 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGCATAAAATCAAGCTTTC+TGG | 0.202037 | 2_1:-81721447 | Msa0228480:CDS |
| AAGAGACGGTCTTTCCTTCT+TGG | 0.212079 | 2_1:-81721261 | Msa0228480:CDS |
| TCGAATCAGACGAAGGATTC+TGG | 0.227503 | 2_1:-81722012 | Msa0228480:CDS |
| CTCGGTCGAGGCCTTGAATT+TGG | 0.228231 | 2_1:-81720817 | Msa0228480:CDS |
| TCTTGGTCGCTGAGGATAAC+TGG | 0.265022 | 2_1:-81721964 | Msa0228480:CDS |
| TTACTCGCCGGAGAAGTTTA+TGG | 0.281431 | 2_1:-81721700 | Msa0228480:CDS |
| AAGAGTTTACTGCAGTTATT+AGG | 0.285374 | 2_1:-81721734 | Msa0228480:CDS |
| TTGTGAAATTACATGGGGTT+GGG | 0.290469 | 2_1:+81722455 | None:intergenic |
| GGCATTATGGCTGGCATCTC+CGG | 0.311071 | 2_1:+81721167 | None:intergenic |
| GTCTGCATTCTTAACAAGTA+TGG | 0.327794 | 2_1:-81721355 | Msa0228480:CDS |
| CATACAATAACATGCTTATC+CGG | 0.342124 | 2_1:+81721816 | None:intergenic |
| GACCGAGTAGGCGGCTGATA+CGG | 0.344344 | 2_1:+81720833 | None:intergenic |
| GAGGCCTTGAATTTGGTTAC+AGG | 0.347410 | 2_1:-81720810 | None:intergenic |
| AGAAGCAGCTTTGCCTGTAC+TGG | 0.348810 | 2_1:-81720935 | Msa0228480:CDS |
| CTAGGATAATGGCTGCTCTT+TGG | 0.361698 | 2_1:-81721629 | Msa0228480:CDS |
| GACATCTGCATTCAAGACTA+TGG | 0.378217 | 2_1:-81722259 | Msa0228480:CDS |
| TTTACTGCAGTTATTAGGTT+AGG | 0.380841 | 2_1:-81721729 | Msa0228480:CDS |
| CGGATAAGCATGTTATTGTA+TGG | 0.384644 | 2_1:-81721815 | Msa0228480:CDS |
| GAGGATAACTGGGAGGATAT+TGG | 0.391130 | 2_1:-81721953 | Msa0228480:CDS |
| TTTGGAACTATGTGAAGTTC+AGG | 0.392757 | 2_1:-81721611 | Msa0228480:CDS |
| GTTGTGAAATTACATGGGGT+TGG | 0.395438 | 2_1:+81722454 | None:intergenic |
| TGTGAAATTACATGGGGTTG+GGG | 0.400064 | 2_1:+81722456 | None:intergenic |
| CGAATCAGACGAAGGATTCT+GGG | 0.417569 | 2_1:-81722011 | Msa0228480:CDS |
| TGCTGCTGTGAGTGTGTTTG+AGG | 0.418463 | 2_1:+81722396 | None:intergenic |
| AGATAGATGCTGCTTTGAAT+AGG | 0.421890 | 2_1:-81722116 | Msa0228480:CDS |
| AAGGATCTAAAGCTTGTTGC+CGG | 0.442916 | 2_1:-81721186 | Msa0228480:CDS |
| GAAGTAGTACTTGCAGTTGC+AGG | 0.445045 | 2_1:+81722345 | None:intergenic |
| ACCGAGTAGGCGGCTGATAC+GGG | 0.449262 | 2_1:+81720834 | None:intergenic |
| AGTGTCTTCCTAACCGAAGT+TGG | 0.452008 | 2_1:+81722060 | None:intergenic |
| CTTCGGTTAGGAAGACACTT+AGG | 0.456994 | 2_1:-81722056 | Msa0228480:CDS |
| TGATACCCGTCCTAGGATAA+TGG | 0.459066 | 2_1:-81721640 | Msa0228480:CDS |
| TTAAGAATCCAACTTCGGTT+AGG | 0.466245 | 2_1:-81722068 | Msa0228480:CDS |
| TGATGAAGTGATTAGCGCTT+CGG | 0.472721 | 2_1:-81721307 | Msa0228480:CDS |
| CTTTCTGGAAATTCTCCTGC+TGG | 0.478032 | 2_1:-81721432 | Msa0228480:CDS |
| CGTTCGTCTGTGCAGCAAGA+TGG | 0.478153 | 2_1:-81721783 | Msa0228480:CDS |
| GCTGCTGTGAGTGTGTTTGA+GGG | 0.480409 | 2_1:+81722397 | None:intergenic |
| AATGCATTAATAAACTCTGC+TGG | 0.482609 | 2_1:+81721225 | None:intergenic |
| GCAGCAGCAGCAACAAAATG+TGG | 0.483939 | 2_1:-81722373 | Msa0228480:CDS |
| TAGTCTTGAATGCAGATGTC+TGG | 0.487927 | 2_1:+81722262 | None:intergenic |
| CAAAGAGCAGCCATTATCCT+AGG | 0.491450 | 2_1:+81721630 | None:intergenic |
| ATGAAGAACGAAGGGTCATT+CGG | 0.492851 | 2_1:+81721576 | None:intergenic |
| CTGAGTCTGCGATTTATACA+AGG | 0.495437 | 2_1:-81722158 | Msa0228480:CDS |
| GTGGTGTTGAGGAGCCGTCT+TGG | 0.499238 | 2_1:-81721981 | Msa0228480:CDS |
| TTCGGTTAGGAAGACACTTA+GGG | 0.499592 | 2_1:-81722055 | Msa0228480:CDS |
| GTTGTTGTTGTGAAATTACA+TGG | 0.499726 | 2_1:+81722448 | None:intergenic |
| ATGTCTTTCTCTAGCGAAAG+AGG | 0.505426 | 2_1:+81721378 | None:intergenic |
| TTTACCGGATAATTTAATAC+CGG | 0.505963 | 2_1:-81722202 | Msa0228480:CDS |
| TTGTGAAAGCTGAAAATGAC+CGG | 0.509436 | 2_1:+81722479 | None:intergenic |
| CTAAAATTAGTTCCCAGTAC+AGG | 0.511701 | 2_1:+81720922 | None:intergenic |
| ATCAGCCGCCTACTCGGTCG+AGG | 0.518691 | 2_1:-81720829 | Msa0228480:CDS |
| TTGAGTTTGATACCCGTCCT+AGG | 0.522477 | 2_1:-81721647 | Msa0228480:CDS |
| CTGATACGGGCTTTAAAACA+TGG | 0.525613 | 2_1:+81720847 | None:intergenic |
| ACTGGGAGGATATTGGAAGA+AGG | 0.527014 | 2_1:-81721946 | Msa0228480:CDS |
| CTGACCTGTAACCAAATTCA+AGG | 0.531941 | 2_1:+81720806 | None:intergenic |
| GCCCGTATCAGCCGCCTACT+CGG | 0.533952 | 2_1:-81720835 | Msa0228480:CDS |
| TGGGAAGGTCGGTGGTGTTG+AGG | 0.537738 | 2_1:-81721992 | Msa0228480:CDS |
| CTTGGTCGCTGAGGATAACT+GGG | 0.545074 | 2_1:-81721963 | Msa0228480:CDS |
| TCATAACATGTAGTTCCAGC+AGG | 0.547015 | 2_1:+81721417 | None:intergenic |
| TACAAGGTTAATTGAGCTTG+AGG | 0.548003 | 2_1:-81722142 | Msa0228480:CDS |
| AACTACATGTTATGATGTGC+AGG | 0.551179 | 2_1:-81721409 | Msa0228480:CDS |
| GAAGCAGCTTTGCCTGTACT+GGG | 0.552227 | 2_1:-81720934 | Msa0228480:CDS |
| ACCGTCTCTTAAGATGCTCA+TGG | 0.552689 | 2_1:+81721274 | None:intergenic |
| AGCAGCCATTATCCTAGGAC+GGG | 0.556334 | 2_1:+81721635 | None:intergenic |
| ATCCCTAAAACTTTAGCTAA+CGG | 0.563561 | 2_1:+81721669 | None:intergenic |
| GGCTATTAAGAATCCAACTT+CGG | 0.565146 | 2_1:-81722073 | Msa0228480:CDS |
| GTTGAAACCATAAACTTCTC+CGG | 0.568621 | 2_1:+81721693 | None:intergenic |
| GAGACTGACTAAAGCCAAGA+AGG | 0.569066 | 2_1:+81721247 | None:intergenic |
| TTACCACTCGGTGAGCCTTG+TGG | 0.572492 | 2_1:+81722285 | None:intergenic |
| GGATAAGCATGTTATTGTAT+GGG | 0.573430 | 2_1:-81721814 | Msa0228480:CDS |
| TTGTTGTTGTGAAATTACAT+GGG | 0.575356 | 2_1:+81722449 | None:intergenic |
| CAAAATCCTTCTCAATTCCC+CGG | 0.579941 | 2_1:-81722498 | Msa0228480:CDS |
| GTGTTTGAGGGTGAGAACGA+GGG | 0.584141 | 2_1:+81722409 | None:intergenic |
| TGTGTTTGAGGGTGAGAACG+AGG | 0.585633 | 2_1:+81722408 | None:intergenic |
| CTTGTATAAATCGCAGACTC+AGG | 0.588015 | 2_1:+81722159 | None:intergenic |
| ACGAAGGATTCTGGGAAGGT+CGG | 0.592126 | 2_1:-81722003 | Msa0228480:CDS |
| ATTGATAGCTTCGCAGAGCA+AGG | 0.595537 | 2_1:-81721205 | Msa0228480:CDS |
| ATACAATAACATGCTTATCC+GGG | 0.596280 | 2_1:+81721817 | None:intergenic |
| GAGCAGCCATTATCCTAGGA+CGG | 0.597021 | 2_1:+81721634 | None:intergenic |
| GGGAGGATATTGGAAGAAGG+TGG | 0.599424 | 2_1:-81721943 | Msa0228480:intron |
| AAATGACCGGGGAATTGAGA+AGG | 0.599441 | 2_1:+81722492 | None:intergenic |
| TGTGAAGCGTTCGCATCACA+AGG | 0.604572 | 2_1:-81722319 | Msa0228480:CDS |
| TGTGAAAGCTGAAAATGACC+GGG | 0.612172 | 2_1:+81722480 | None:intergenic |
| CAAGGCCTCGACCGAGTAGG+CGG | 0.612891 | 2_1:+81720824 | None:intergenic |
| AAGGCGAATTCGCGTCCACA+AGG | 0.613834 | 2_1:-81722300 | Msa0228480:CDS |
| GTTAGGAGTGAATTACTCGC+CGG | 0.615363 | 2_1:-81721712 | Msa0228480:CDS |
| AGAAAAGATGAAATTCTCGA+TGG | 0.617914 | 2_1:-81721520 | Msa0228480:CDS |
| AAGGATTCTGGGAAGGTCGG+TGG | 0.622501 | 2_1:-81722000 | Msa0228480:CDS |
| ATTCAAGGCCTCGACCGAGT+AGG | 0.623154 | 2_1:+81720821 | None:intergenic |
| TGCTCCAGGTGTATATGCTG+TGG | 0.631447 | 2_1:+81721465 | None:intergenic |
| TGTTGTTGTGAAATTACATG+GGG | 0.633285 | 2_1:+81722450 | None:intergenic |
| TCCATGAGCATCTTAAGAGA+CGG | 0.634524 | 2_1:-81721275 | Msa0228480:CDS |
| CTGAATTCTACAATAAACCA+TGG | 0.634626 | 2_1:-81721128 | Msa0228480:intron |
| ACAACCACAGCATATACACC+TGG | 0.645264 | 2_1:-81721469 | Msa0228480:CDS |
| TCAGACGAAGGATTCTGGGA+AGG | 0.651041 | 2_1:-81722007 | Msa0228480:CDS |
| CATCACACATGAAGAACGAA+GGG | 0.661052 | 2_1:+81721568 | None:intergenic |
| GCATCACACATGAAGAACGA+AGG | 0.661725 | 2_1:+81721567 | None:intergenic |
| GCAGATGTCTGGTTACCACT+CGG | 0.661828 | 2_1:+81722273 | None:intergenic |
| AGGAGCCGTCTTGGTCGCTG+AGG | 0.665609 | 2_1:-81721972 | Msa0228480:CDS |
| GTTATCCTCAGCGACCAAGA+CGG | 0.677197 | 2_1:+81721967 | None:intergenic |
| CATTCTTAACAAGTATGGAG+AGG | 0.690297 | 2_1:-81721350 | Msa0228480:CDS |
| CGTCCACAAGGCTCACCGAG+TGG | 0.697312 | 2_1:-81722288 | Msa0228480:CDS |
| GGTCGCTGAGGATAACTGGG+AGG | 0.734039 | 2_1:-81721960 | Msa0228480:CDS |
| GTGAAAGCTGAAAATGACCG+GGG | 0.741276 | 2_1:+81722481 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATTTTAATTTACATCTTT+TGG | - | chr2_1:81722274-81722293 | Msa0228480:CDS | 15.0% |
| !!! | GTATTTTAATTTACATCTTT+TGG | - | chr2_1:81722274-81722293 | Msa0228480:CDS | 15.0% |
| !!! | ATGTTTTGACTAAAACTAAA+AGG | - | chr2_1:81722239-81722258 | Msa0228480:CDS | 20.0% |
| !!! | ATGTTTTGACTAAAACTAAA+AGG | - | chr2_1:81722239-81722258 | Msa0228480:CDS | 20.0% |
| !! | TTGTTGTTGTGAAATTACAT+GGG | + | chr2_1:81720868-81720887 | None:intergenic | 25.0% |
| ! | TTTACCGGATAATTTAATAC+CGG | - | chr2_1:81721112-81721131 | Msa0228480:intron | 25.0% |
| !! | TTTTCCGGTATTAAATTATC+CGG | + | chr2_1:81721119-81721138 | None:intergenic | 25.0% |
| ! | TAATTTAATACCGGAAAAAG+TGG | - | chr2_1:81721121-81721140 | Msa0228480:intron | 25.0% |
| !! | TTCAGAACGTTTTTCATTTT+CGG | + | chr2_1:81722171-81722190 | None:intergenic | 25.0% |
| !! | TTGTTGTTGTGAAATTACAT+GGG | + | chr2_1:81720868-81720887 | None:intergenic | 25.0% |
| ! | TTTACCGGATAATTTAATAC+CGG | - | chr2_1:81721112-81721131 | Msa0228480:intron | 25.0% |
| !! | TTTTCCGGTATTAAATTATC+CGG | + | chr2_1:81721119-81721138 | None:intergenic | 25.0% |
| ! | TAATTTAATACCGGAAAAAG+TGG | - | chr2_1:81721121-81721140 | Msa0228480:intron | 25.0% |
| !! | TTCAGAACGTTTTTCATTTT+CGG | + | chr2_1:81722171-81722190 | None:intergenic | 25.0% |
| TGTTGTTGTGAAATTACATG+GGG | + | chr2_1:81720867-81720886 | None:intergenic | 30.0% | |
| ! | GTTGTTGTTGTGAAATTACA+TGG | + | chr2_1:81720869-81720888 | None:intergenic | 30.0% |
| ! | TATTGTGTATCCGAAGTTTT+CGG | - | chr2_1:81721432-81721451 | Msa0228480:CDS | 30.0% |
| TTAAAGAAAGCCGAAAACTT+CGG | + | chr2_1:81721445-81721464 | None:intergenic | 30.0% | |
| ! | GGCTTTCTTTAAGAAGATTA+CGG | - | chr2_1:81721453-81721472 | Msa0228480:CDS | 30.0% |
| TAAGAAGATTACGGTGTATT+TGG | - | chr2_1:81721462-81721481 | Msa0228480:CDS | 30.0% | |
| ATACAATAACATGCTTATCC+GGG | + | chr2_1:81721500-81721519 | None:intergenic | 30.0% | |
| CATACAATAACATGCTTATC+CGG | + | chr2_1:81721501-81721520 | None:intergenic | 30.0% | |
| GGATAAGCATGTTATTGTAT+GGG | - | chr2_1:81721500-81721519 | Msa0228480:CDS | 30.0% | |
| AAGAGTTTACTGCAGTTATT+AGG | - | chr2_1:81721580-81721599 | Msa0228480:CDS | 30.0% | |
| TTTACTGCAGTTATTAGGTT+AGG | - | chr2_1:81721585-81721604 | Msa0228480:CDS | 30.0% | |
| ATCCCTAAAACTTTAGCTAA+CGG | + | chr2_1:81721648-81721667 | None:intergenic | 30.0% | |
| AGAAAAGATGAAATTCTCGA+TGG | - | chr2_1:81721794-81721813 | Msa0228480:CDS | 30.0% | |
| AATGCATTAATAAACTCTGC+TGG | + | chr2_1:81722092-81722111 | None:intergenic | 30.0% | |
| ! | GTTTTTCATTTTCGGCATTA+TGG | + | chr2_1:81722163-81722182 | None:intergenic | 30.0% |
| CTGAATTCTACAATAAACCA+TGG | - | chr2_1:81722186-81722205 | Msa0228480:CDS | 30.0% | |
| TTGACTAAAACTAAAAGGCA+TGG | - | chr2_1:81722244-81722263 | Msa0228480:CDS | 30.0% | |
| ! | TGTACTGGGAACTAATTTTA+GGG | - | chr2_1:81722394-81722413 | Msa0228480:CDS | 30.0% |
| TGTTGTTGTGAAATTACATG+GGG | + | chr2_1:81720867-81720886 | None:intergenic | 30.0% | |
| ! | GTTGTTGTTGTGAAATTACA+TGG | + | chr2_1:81720869-81720888 | None:intergenic | 30.0% |
| ! | TATTGTGTATCCGAAGTTTT+CGG | - | chr2_1:81721432-81721451 | Msa0228480:CDS | 30.0% |
| TTAAAGAAAGCCGAAAACTT+CGG | + | chr2_1:81721445-81721464 | None:intergenic | 30.0% | |
| ! | GGCTTTCTTTAAGAAGATTA+CGG | - | chr2_1:81721453-81721472 | Msa0228480:CDS | 30.0% |
| TAAGAAGATTACGGTGTATT+TGG | - | chr2_1:81721462-81721481 | Msa0228480:CDS | 30.0% | |
| ATACAATAACATGCTTATCC+GGG | + | chr2_1:81721500-81721519 | None:intergenic | 30.0% | |
| CATACAATAACATGCTTATC+CGG | + | chr2_1:81721501-81721520 | None:intergenic | 30.0% | |
| GGATAAGCATGTTATTGTAT+GGG | - | chr2_1:81721500-81721519 | Msa0228480:CDS | 30.0% | |
| AAGAGTTTACTGCAGTTATT+AGG | - | chr2_1:81721580-81721599 | Msa0228480:CDS | 30.0% | |
| TTTACTGCAGTTATTAGGTT+AGG | - | chr2_1:81721585-81721604 | Msa0228480:CDS | 30.0% | |
| ATCCCTAAAACTTTAGCTAA+CGG | + | chr2_1:81721648-81721667 | None:intergenic | 30.0% | |
| AGAAAAGATGAAATTCTCGA+TGG | - | chr2_1:81721794-81721813 | Msa0228480:CDS | 30.0% | |
| AATGCATTAATAAACTCTGC+TGG | + | chr2_1:81722092-81722111 | None:intergenic | 30.0% | |
| ! | GTTTTTCATTTTCGGCATTA+TGG | + | chr2_1:81722163-81722182 | None:intergenic | 30.0% |
| CTGAATTCTACAATAAACCA+TGG | - | chr2_1:81722186-81722205 | Msa0228480:CDS | 30.0% | |
| TTGACTAAAACTAAAAGGCA+TGG | - | chr2_1:81722244-81722263 | Msa0228480:CDS | 30.0% | |
| ! | TGTACTGGGAACTAATTTTA+GGG | - | chr2_1:81722394-81722413 | Msa0228480:CDS | 30.0% |
| TTGTGAAAGCTGAAAATGAC+CGG | + | chr2_1:81720838-81720857 | None:intergenic | 35.0% | |
| TTGTGAAATTACATGGGGTT+GGG | + | chr2_1:81720862-81720881 | None:intergenic | 35.0% | |
| !!! | AAAGTCCTCTTTTTTCTCAG+AGG | + | chr2_1:81721095-81721114 | None:intergenic | 35.0% |
| GAGAAAAAAGAGGACTTTAC+CGG | - | chr2_1:81721097-81721116 | Msa0228480:intron | 35.0% | |
| !!! | ACAATCTTAGCCACTTTTTC+CGG | + | chr2_1:81721134-81721153 | None:intergenic | 35.0% |
| TACAAGGTTAATTGAGCTTG+AGG | - | chr2_1:81721172-81721191 | Msa0228480:CDS | 35.0% | |
| !! | AGATAGATGCTGCTTTGAAT+AGG | - | chr2_1:81721198-81721217 | Msa0228480:CDS | 35.0% |
| TAGGAAAAAGATTGATGTGC+AGG | - | chr2_1:81721217-81721236 | Msa0228480:CDS | 35.0% | |
| GGCTATTAAGAATCCAACTT+CGG | - | chr2_1:81721241-81721260 | Msa0228480:CDS | 35.0% | |
| TTAAGAATCCAACTTCGGTT+AGG | - | chr2_1:81721246-81721265 | Msa0228480:CDS | 35.0% | |
| ATTACGGTGTATTTGGATCA+GGG | - | chr2_1:81721469-81721488 | Msa0228480:CDS | 35.0% | |
| CGGATAAGCATGTTATTGTA+TGG | - | chr2_1:81721499-81721518 | Msa0228480:CDS | 35.0% | |
| GTTGAAACCATAAACTTCTC+CGG | + | chr2_1:81721624-81721643 | None:intergenic | 35.0% | |
| ! | ACACCGTTAGCTAAAGTTTT+AGG | - | chr2_1:81721642-81721661 | Msa0228480:CDS | 35.0% |
| ! | CACCGTTAGCTAAAGTTTTA+GGG | - | chr2_1:81721643-81721662 | Msa0228480:CDS | 35.0% |
| ! | TTTGGAACTATGTGAAGTTC+AGG | - | chr2_1:81721703-81721722 | Msa0228480:CDS | 35.0% |
| ! | AAAGCTTGATTTTATGCTCC+AGG | + | chr2_1:81721866-81721885 | None:intergenic | 35.0% |
| GAGCATAAAATCAAGCTTTC+TGG | - | chr2_1:81721867-81721886 | Msa0228480:intron | 35.0% | |
| AACTACATGTTATGATGTGC+AGG | - | chr2_1:81721905-81721924 | Msa0228480:intron | 35.0% | |
| GTCTGCATTCTTAACAAGTA+TGG | - | chr2_1:81721959-81721978 | Msa0228480:CDS | 35.0% | |
| CATTCTTAACAAGTATGGAG+AGG | - | chr2_1:81721964-81721983 | Msa0228480:CDS | 35.0% | |
| AAGTAGCAAAATGCTTACCA+TGG | + | chr2_1:81722206-81722225 | None:intergenic | 35.0% | |
| ! | AACTAAAAGGCATGGAAGAA+TGG | - | chr2_1:81722252-81722271 | Msa0228480:CDS | 35.0% |
| CTAAAATTAGTTCCCAGTAC+AGG | + | chr2_1:81722395-81722414 | None:intergenic | 35.0% | |
| ! | CTGTACTGGGAACTAATTTT+AGG | - | chr2_1:81722393-81722412 | Msa0228480:CDS | 35.0% |
| TTGTGAAAGCTGAAAATGAC+CGG | + | chr2_1:81720838-81720857 | None:intergenic | 35.0% | |
| TTGTGAAATTACATGGGGTT+GGG | + | chr2_1:81720862-81720881 | None:intergenic | 35.0% | |
| !!! | AAAGTCCTCTTTTTTCTCAG+AGG | + | chr2_1:81721095-81721114 | None:intergenic | 35.0% |
| GAGAAAAAAGAGGACTTTAC+CGG | - | chr2_1:81721097-81721116 | Msa0228480:intron | 35.0% | |
| !!! | ACAATCTTAGCCACTTTTTC+CGG | + | chr2_1:81721134-81721153 | None:intergenic | 35.0% |
| TACAAGGTTAATTGAGCTTG+AGG | - | chr2_1:81721172-81721191 | Msa0228480:CDS | 35.0% | |
| !! | AGATAGATGCTGCTTTGAAT+AGG | - | chr2_1:81721198-81721217 | Msa0228480:CDS | 35.0% |
| TAGGAAAAAGATTGATGTGC+AGG | - | chr2_1:81721217-81721236 | Msa0228480:CDS | 35.0% | |
| GGCTATTAAGAATCCAACTT+CGG | - | chr2_1:81721241-81721260 | Msa0228480:CDS | 35.0% | |
| TTAAGAATCCAACTTCGGTT+AGG | - | chr2_1:81721246-81721265 | Msa0228480:CDS | 35.0% | |
| ATTACGGTGTATTTGGATCA+GGG | - | chr2_1:81721469-81721488 | Msa0228480:CDS | 35.0% | |
| CGGATAAGCATGTTATTGTA+TGG | - | chr2_1:81721499-81721518 | Msa0228480:CDS | 35.0% | |
| GTTGAAACCATAAACTTCTC+CGG | + | chr2_1:81721624-81721643 | None:intergenic | 35.0% | |
| ! | ACACCGTTAGCTAAAGTTTT+AGG | - | chr2_1:81721642-81721661 | Msa0228480:CDS | 35.0% |
| ! | CACCGTTAGCTAAAGTTTTA+GGG | - | chr2_1:81721643-81721662 | Msa0228480:CDS | 35.0% |
| ! | TTTGGAACTATGTGAAGTTC+AGG | - | chr2_1:81721703-81721722 | Msa0228480:CDS | 35.0% |
| ! | AAAGCTTGATTTTATGCTCC+AGG | + | chr2_1:81721866-81721885 | None:intergenic | 35.0% |
| GAGCATAAAATCAAGCTTTC+TGG | - | chr2_1:81721867-81721886 | Msa0228480:intron | 35.0% | |
| AACTACATGTTATGATGTGC+AGG | - | chr2_1:81721905-81721924 | Msa0228480:intron | 35.0% | |
| GTCTGCATTCTTAACAAGTA+TGG | - | chr2_1:81721959-81721978 | Msa0228480:CDS | 35.0% | |
| CATTCTTAACAAGTATGGAG+AGG | - | chr2_1:81721964-81721983 | Msa0228480:CDS | 35.0% | |
| AAGTAGCAAAATGCTTACCA+TGG | + | chr2_1:81722206-81722225 | None:intergenic | 35.0% | |
| ! | AACTAAAAGGCATGGAAGAA+TGG | - | chr2_1:81722252-81722271 | Msa0228480:CDS | 35.0% |
| CTAAAATTAGTTCCCAGTAC+AGG | + | chr2_1:81722395-81722414 | None:intergenic | 35.0% | |
| ! | CTGTACTGGGAACTAATTTT+AGG | - | chr2_1:81722393-81722412 | Msa0228480:CDS | 35.0% |
| CAAAATCCTTCTCAATTCCC+CGG | - | chr2_1:81720816-81720835 | Msa0228480:CDS | 40.0% | |
| TGTGAAAGCTGAAAATGACC+GGG | + | chr2_1:81720837-81720856 | None:intergenic | 40.0% | |
| TGTGAAATTACATGGGGTTG+GGG | + | chr2_1:81720861-81720880 | None:intergenic | 40.0% | |
| GTTGTGAAATTACATGGGGT+TGG | + | chr2_1:81720863-81720882 | None:intergenic | 40.0% | |
| ! | TAGTCTTGAATGCAGATGTC+TGG | + | chr2_1:81721055-81721074 | None:intergenic | 40.0% |
| GACATCTGCATTCAAGACTA+TGG | - | chr2_1:81721055-81721074 | Msa0228480:intron | 40.0% | |
| CTTGTATAAATCGCAGACTC+AGG | + | chr2_1:81721158-81721177 | None:intergenic | 40.0% | |
| CTGAGTCTGCGATTTATACA+AGG | - | chr2_1:81721156-81721175 | Msa0228480:CDS | 40.0% | |
| GAAAAAGATTGATGTGCAGG+AGG | - | chr2_1:81721220-81721239 | Msa0228480:CDS | 40.0% | |
| TTCGGTTAGGAAGACACTTA+GGG | - | chr2_1:81721259-81721278 | Msa0228480:CDS | 40.0% | |
| ! | TACGTTTTCGAATCAGACGA+AGG | - | chr2_1:81721295-81721314 | Msa0228480:CDS | 40.0% |
| GATATTGGAAGAAGGTGGTA+AGG | - | chr2_1:81721376-81721395 | Msa0228480:CDS | 40.0% | |
| GATTACGGTGTATTTGGATC+AGG | - | chr2_1:81721468-81721487 | Msa0228480:CDS | 40.0% | |
| ! | ATTTGGATCAGGGTTTTACC+CGG | - | chr2_1:81721479-81721498 | Msa0228480:CDS | 40.0% |
| !!! | AAGATGGTTTTGAGGTGAAG+AGG | - | chr2_1:81721547-81721566 | Msa0228480:CDS | 40.0% |
| !!! | GTTTTGAGGTGAAGAGGAAA+GGG | - | chr2_1:81721553-81721572 | Msa0228480:CDS | 40.0% |
| !!! | TTTTGAGGTGAAGAGGAAAG+GGG | - | chr2_1:81721554-81721573 | Msa0228480:CDS | 40.0% |
| ATGAAGAACGAAGGGTCATT+CGG | + | chr2_1:81721741-81721760 | None:intergenic | 40.0% | |
| CATCACACATGAAGAACGAA+GGG | + | chr2_1:81721749-81721768 | None:intergenic | 40.0% | |
| !! | GCTTCTCTCCAAAAAGTGTT+CGG | - | chr2_1:81721768-81721787 | Msa0228480:CDS | 40.0% |
| !! | CTTCTCTCCAAAAAGTGTTC+GGG | - | chr2_1:81721769-81721788 | Msa0228480:CDS | 40.0% |
| !! | TTCTCTCCAAAAAGTGTTCG+GGG | - | chr2_1:81721770-81721789 | Msa0228480:CDS | 40.0% |
| ! | TTTCTTCCCCGAACACTTTT+TGG | + | chr2_1:81721779-81721798 | None:intergenic | 40.0% |
| TCATAACATGTAGTTCCAGC+AGG | + | chr2_1:81721900-81721919 | None:intergenic | 40.0% | |
| ATGTCTTTCTCTAGCGAAAG+AGG | + | chr2_1:81721939-81721958 | None:intergenic | 40.0% | |
| TGATGAAGTGATTAGCGCTT+CGG | - | chr2_1:81722007-81722026 | Msa0228480:CDS | 40.0% | |
| TCCATGAGCATCTTAAGAGA+CGG | - | chr2_1:81722039-81722058 | Msa0228480:CDS | 40.0% | |
| !! | AAGGATCTAAAGCTTGTTGC+CGG | - | chr2_1:81722128-81722147 | Msa0228480:CDS | 40.0% |
| ! | TTCATTTTCGGCATTATGGC+TGG | + | chr2_1:81722159-81722178 | None:intergenic | 40.0% |
| !! | CTGATACGGGCTTTAAAACA+TGG | + | chr2_1:81722470-81722489 | None:intergenic | 40.0% |
| CAAAATCCTTCTCAATTCCC+CGG | - | chr2_1:81720816-81720835 | Msa0228480:CDS | 40.0% | |
| TGTGAAAGCTGAAAATGACC+GGG | + | chr2_1:81720837-81720856 | None:intergenic | 40.0% | |
| TGTGAAATTACATGGGGTTG+GGG | + | chr2_1:81720861-81720880 | None:intergenic | 40.0% | |
| GTTGTGAAATTACATGGGGT+TGG | + | chr2_1:81720863-81720882 | None:intergenic | 40.0% | |
| ! | TAGTCTTGAATGCAGATGTC+TGG | + | chr2_1:81721055-81721074 | None:intergenic | 40.0% |
| GACATCTGCATTCAAGACTA+TGG | - | chr2_1:81721055-81721074 | Msa0228480:intron | 40.0% | |
| CTTGTATAAATCGCAGACTC+AGG | + | chr2_1:81721158-81721177 | None:intergenic | 40.0% | |
| CTGAGTCTGCGATTTATACA+AGG | - | chr2_1:81721156-81721175 | Msa0228480:CDS | 40.0% | |
| GAAAAAGATTGATGTGCAGG+AGG | - | chr2_1:81721220-81721239 | Msa0228480:CDS | 40.0% | |
| TTCGGTTAGGAAGACACTTA+GGG | - | chr2_1:81721259-81721278 | Msa0228480:CDS | 40.0% | |
| ! | TACGTTTTCGAATCAGACGA+AGG | - | chr2_1:81721295-81721314 | Msa0228480:CDS | 40.0% |
| GATATTGGAAGAAGGTGGTA+AGG | - | chr2_1:81721376-81721395 | Msa0228480:CDS | 40.0% | |
| GATTACGGTGTATTTGGATC+AGG | - | chr2_1:81721468-81721487 | Msa0228480:CDS | 40.0% | |
| ! | ATTTGGATCAGGGTTTTACC+CGG | - | chr2_1:81721479-81721498 | Msa0228480:CDS | 40.0% |
| !!! | AAGATGGTTTTGAGGTGAAG+AGG | - | chr2_1:81721547-81721566 | Msa0228480:CDS | 40.0% |
| !!! | GTTTTGAGGTGAAGAGGAAA+GGG | - | chr2_1:81721553-81721572 | Msa0228480:CDS | 40.0% |
| !!! | TTTTGAGGTGAAGAGGAAAG+GGG | - | chr2_1:81721554-81721573 | Msa0228480:CDS | 40.0% |
| ATGAAGAACGAAGGGTCATT+CGG | + | chr2_1:81721741-81721760 | None:intergenic | 40.0% | |
| CATCACACATGAAGAACGAA+GGG | + | chr2_1:81721749-81721768 | None:intergenic | 40.0% | |
| !! | GCTTCTCTCCAAAAAGTGTT+CGG | - | chr2_1:81721768-81721787 | Msa0228480:CDS | 40.0% |
| !! | CTTCTCTCCAAAAAGTGTTC+GGG | - | chr2_1:81721769-81721788 | Msa0228480:CDS | 40.0% |
| !! | TTCTCTCCAAAAAGTGTTCG+GGG | - | chr2_1:81721770-81721789 | Msa0228480:CDS | 40.0% |
| ! | TTTCTTCCCCGAACACTTTT+TGG | + | chr2_1:81721779-81721798 | None:intergenic | 40.0% |
| TCATAACATGTAGTTCCAGC+AGG | + | chr2_1:81721900-81721919 | None:intergenic | 40.0% | |
| ATGTCTTTCTCTAGCGAAAG+AGG | + | chr2_1:81721939-81721958 | None:intergenic | 40.0% | |
| TGATGAAGTGATTAGCGCTT+CGG | - | chr2_1:81722007-81722026 | Msa0228480:CDS | 40.0% | |
| TCCATGAGCATCTTAAGAGA+CGG | - | chr2_1:81722039-81722058 | Msa0228480:CDS | 40.0% | |
| !! | AAGGATCTAAAGCTTGTTGC+CGG | - | chr2_1:81722128-81722147 | Msa0228480:CDS | 40.0% |
| ! | TTCATTTTCGGCATTATGGC+TGG | + | chr2_1:81722159-81722178 | None:intergenic | 40.0% |
| !! | CTGATACGGGCTTTAAAACA+TGG | + | chr2_1:81722470-81722489 | None:intergenic | 40.0% |
| AAATGACCGGGGAATTGAGA+AGG | + | chr2_1:81720825-81720844 | None:intergenic | 45.0% | |
| GTGAAAGCTGAAAATGACCG+GGG | + | chr2_1:81720836-81720855 | None:intergenic | 45.0% | |
| GAAGTAGTACTTGCAGTTGC+AGG | + | chr2_1:81720972-81720991 | None:intergenic | 45.0% | |
| !!! | CTCTTTTTTCTCAGAGGAGC+AGG | + | chr2_1:81721089-81721108 | None:intergenic | 45.0% |
| ! | CTGCTCCTCTGAGAAAAAAG+AGG | - | chr2_1:81721087-81721106 | Msa0228480:intron | 45.0% |
| AGTGTCTTCCTAACCGAAGT+TGG | + | chr2_1:81721257-81721276 | None:intergenic | 45.0% | |
| CTTCGGTTAGGAAGACACTT+AGG | - | chr2_1:81721258-81721277 | Msa0228480:CDS | 45.0% | |
| TCGAATCAGACGAAGGATTC+TGG | - | chr2_1:81721302-81721321 | Msa0228480:CDS | 45.0% | |
| CGAATCAGACGAAGGATTCT+GGG | - | chr2_1:81721303-81721322 | Msa0228480:CDS | 45.0% | |
| GAGGATAACTGGGAGGATAT+TGG | - | chr2_1:81721361-81721380 | Msa0228480:CDS | 45.0% | |
| ACTGGGAGGATATTGGAAGA+AGG | - | chr2_1:81721368-81721387 | Msa0228480:CDS | 45.0% | |
| !! | TGTGCAGCAAGATGGTTTTG+AGG | - | chr2_1:81721539-81721558 | Msa0228480:CDS | 45.0% |
| !!! | GGTTTTGAGGTGAAGAGGAA+AGG | - | chr2_1:81721552-81721571 | Msa0228480:CDS | 45.0% |
| GTTAGGAGTGAATTACTCGC+CGG | - | chr2_1:81721602-81721621 | Msa0228480:CDS | 45.0% | |
| TTACTCGCCGGAGAAGTTTA+TGG | - | chr2_1:81721614-81721633 | Msa0228480:CDS | 45.0% | |
| TTGAGTTTGATACCCGTCCT+AGG | - | chr2_1:81721667-81721686 | Msa0228480:CDS | 45.0% | |
| TGATACCCGTCCTAGGATAA+TGG | - | chr2_1:81721674-81721693 | Msa0228480:CDS | 45.0% | |
| CAAAGAGCAGCCATTATCCT+AGG | + | chr2_1:81721687-81721706 | None:intergenic | 45.0% | |
| ! | CTAGGATAATGGCTGCTCTT+TGG | - | chr2_1:81721685-81721704 | Msa0228480:CDS | 45.0% |
| GCATCACACATGAAGAACGA+AGG | + | chr2_1:81721750-81721769 | None:intergenic | 45.0% | |
| ACAACCACAGCATATACACC+TGG | - | chr2_1:81721845-81721864 | Msa0228480:intron | 45.0% | |
| ! | CTTTCTGGAAATTCTCCTGC+TGG | - | chr2_1:81721882-81721901 | Msa0228480:intron | 45.0% |
| ACCGTCTCTTAAGATGCTCA+TGG | + | chr2_1:81722043-81722062 | None:intergenic | 45.0% | |
| AAGAGACGGTCTTTCCTTCT+TGG | - | chr2_1:81722053-81722072 | Msa0228480:CDS | 45.0% | |
| GAGACTGACTAAAGCCAAGA+AGG | + | chr2_1:81722070-81722089 | None:intergenic | 45.0% | |
| ! | ATTGATAGCTTCGCAGAGCA+AGG | - | chr2_1:81722109-81722128 | Msa0228480:CDS | 45.0% |
| AAATGACCGGGGAATTGAGA+AGG | + | chr2_1:81720825-81720844 | None:intergenic | 45.0% | |
| GTGAAAGCTGAAAATGACCG+GGG | + | chr2_1:81720836-81720855 | None:intergenic | 45.0% | |
| GAAGTAGTACTTGCAGTTGC+AGG | + | chr2_1:81720972-81720991 | None:intergenic | 45.0% | |
| !!! | CTCTTTTTTCTCAGAGGAGC+AGG | + | chr2_1:81721089-81721108 | None:intergenic | 45.0% |
| ! | CTGCTCCTCTGAGAAAAAAG+AGG | - | chr2_1:81721087-81721106 | Msa0228480:intron | 45.0% |
| AGTGTCTTCCTAACCGAAGT+TGG | + | chr2_1:81721257-81721276 | None:intergenic | 45.0% | |
| CTTCGGTTAGGAAGACACTT+AGG | - | chr2_1:81721258-81721277 | Msa0228480:CDS | 45.0% | |
| TCGAATCAGACGAAGGATTC+TGG | - | chr2_1:81721302-81721321 | Msa0228480:CDS | 45.0% | |
| CGAATCAGACGAAGGATTCT+GGG | - | chr2_1:81721303-81721322 | Msa0228480:CDS | 45.0% | |
| GAGGATAACTGGGAGGATAT+TGG | - | chr2_1:81721361-81721380 | Msa0228480:CDS | 45.0% | |
| ACTGGGAGGATATTGGAAGA+AGG | - | chr2_1:81721368-81721387 | Msa0228480:CDS | 45.0% | |
| !! | TGTGCAGCAAGATGGTTTTG+AGG | - | chr2_1:81721539-81721558 | Msa0228480:CDS | 45.0% |
| !!! | GGTTTTGAGGTGAAGAGGAA+AGG | - | chr2_1:81721552-81721571 | Msa0228480:CDS | 45.0% |
| GTTAGGAGTGAATTACTCGC+CGG | - | chr2_1:81721602-81721621 | Msa0228480:CDS | 45.0% | |
| TTACTCGCCGGAGAAGTTTA+TGG | - | chr2_1:81721614-81721633 | Msa0228480:CDS | 45.0% | |
| TTGAGTTTGATACCCGTCCT+AGG | - | chr2_1:81721667-81721686 | Msa0228480:CDS | 45.0% | |
| TGATACCCGTCCTAGGATAA+TGG | - | chr2_1:81721674-81721693 | Msa0228480:CDS | 45.0% | |
| CAAAGAGCAGCCATTATCCT+AGG | + | chr2_1:81721687-81721706 | None:intergenic | 45.0% | |
| ! | CTAGGATAATGGCTGCTCTT+TGG | - | chr2_1:81721685-81721704 | Msa0228480:CDS | 45.0% |
| GCATCACACATGAAGAACGA+AGG | + | chr2_1:81721750-81721769 | None:intergenic | 45.0% | |
| ACAACCACAGCATATACACC+TGG | - | chr2_1:81721845-81721864 | Msa0228480:intron | 45.0% | |
| ! | CTTTCTGGAAATTCTCCTGC+TGG | - | chr2_1:81721882-81721901 | Msa0228480:intron | 45.0% |
| ACCGTCTCTTAAGATGCTCA+TGG | + | chr2_1:81722043-81722062 | None:intergenic | 45.0% | |
| AAGAGACGGTCTTTCCTTCT+TGG | - | chr2_1:81722053-81722072 | Msa0228480:CDS | 45.0% | |
| GAGACTGACTAAAGCCAAGA+AGG | + | chr2_1:81722070-81722089 | None:intergenic | 45.0% | |
| ! | ATTGATAGCTTCGCAGAGCA+AGG | - | chr2_1:81722109-81722128 | Msa0228480:CDS | 45.0% |
| GTGTTTGAGGGTGAGAACGA+GGG | + | chr2_1:81720908-81720927 | None:intergenic | 50.0% | |
| TGTGTTTGAGGGTGAGAACG+AGG | + | chr2_1:81720909-81720928 | None:intergenic | 50.0% | |
| GCTGCTGTGAGTGTGTTTGA+GGG | + | chr2_1:81720920-81720939 | None:intergenic | 50.0% | |
| TGCTGCTGTGAGTGTGTTTG+AGG | + | chr2_1:81720921-81720940 | None:intergenic | 50.0% | |
| GCAGCAGCAGCAACAAAATG+TGG | - | chr2_1:81720941-81720960 | Msa0228480:CDS | 50.0% | |
| ! | TGTGAAGCGTTCGCATCACA+AGG | - | chr2_1:81720995-81721014 | Msa0228480:CDS | 50.0% |
| GCAGATGTCTGGTTACCACT+CGG | + | chr2_1:81721044-81721063 | None:intergenic | 50.0% | |
| ! | TCAGACGAAGGATTCTGGGA+AGG | - | chr2_1:81721307-81721326 | Msa0228480:CDS | 50.0% |
| ! | ACGAAGGATTCTGGGAAGGT+CGG | - | chr2_1:81721311-81721330 | Msa0228480:CDS | 50.0% |
| GTTATCCTCAGCGACCAAGA+CGG | + | chr2_1:81721350-81721369 | None:intergenic | 50.0% | |
| TCTTGGTCGCTGAGGATAAC+TGG | - | chr2_1:81721350-81721369 | Msa0228480:CDS | 50.0% | |
| CTTGGTCGCTGAGGATAACT+GGG | - | chr2_1:81721351-81721370 | Msa0228480:CDS | 50.0% | |
| GGGAGGATATTGGAAGAAGG+TGG | - | chr2_1:81721371-81721390 | Msa0228480:CDS | 50.0% | |
| AGAAGGTGGTAAGGATCCTG+TGG | - | chr2_1:81721385-81721404 | Msa0228480:CDS | 50.0% | |
| TTTCGAAATCCTCCCACCAC+AGG | + | chr2_1:81721404-81721423 | None:intergenic | 50.0% | |
| GGTGGGAGGATTTCGAAAAG+TGG | - | chr2_1:81721406-81721425 | Msa0228480:CDS | 50.0% | |
| AGCAGCCATTATCCTAGGAC+GGG | + | chr2_1:81721682-81721701 | None:intergenic | 50.0% | |
| GAGCAGCCATTATCCTAGGA+CGG | + | chr2_1:81721683-81721702 | None:intergenic | 50.0% | |
| TGCTCCAGGTGTATATGCTG+TGG | + | chr2_1:81721852-81721871 | None:intergenic | 50.0% | |
| AGAAGCAGCTTTGCCTGTAC+TGG | - | chr2_1:81722379-81722398 | Msa0228480:CDS | 50.0% | |
| GAAGCAGCTTTGCCTGTACT+GGG | - | chr2_1:81722380-81722399 | Msa0228480:CDS | 50.0% | |
| GTGTTTGAGGGTGAGAACGA+GGG | + | chr2_1:81720908-81720927 | None:intergenic | 50.0% | |
| TGTGTTTGAGGGTGAGAACG+AGG | + | chr2_1:81720909-81720928 | None:intergenic | 50.0% | |
| GCTGCTGTGAGTGTGTTTGA+GGG | + | chr2_1:81720920-81720939 | None:intergenic | 50.0% | |
| TGCTGCTGTGAGTGTGTTTG+AGG | + | chr2_1:81720921-81720940 | None:intergenic | 50.0% | |
| GCAGCAGCAGCAACAAAATG+TGG | - | chr2_1:81720941-81720960 | Msa0228480:CDS | 50.0% | |
| ! | TGTGAAGCGTTCGCATCACA+AGG | - | chr2_1:81720995-81721014 | Msa0228480:CDS | 50.0% |
| GCAGATGTCTGGTTACCACT+CGG | + | chr2_1:81721044-81721063 | None:intergenic | 50.0% | |
| ! | TCAGACGAAGGATTCTGGGA+AGG | - | chr2_1:81721307-81721326 | Msa0228480:CDS | 50.0% |
| ! | ACGAAGGATTCTGGGAAGGT+CGG | - | chr2_1:81721311-81721330 | Msa0228480:CDS | 50.0% |
| GTTATCCTCAGCGACCAAGA+CGG | + | chr2_1:81721350-81721369 | None:intergenic | 50.0% | |
| TCTTGGTCGCTGAGGATAAC+TGG | - | chr2_1:81721350-81721369 | Msa0228480:CDS | 50.0% | |
| CTTGGTCGCTGAGGATAACT+GGG | - | chr2_1:81721351-81721370 | Msa0228480:CDS | 50.0% | |
| GGGAGGATATTGGAAGAAGG+TGG | - | chr2_1:81721371-81721390 | Msa0228480:CDS | 50.0% | |
| AGAAGGTGGTAAGGATCCTG+TGG | - | chr2_1:81721385-81721404 | Msa0228480:CDS | 50.0% | |
| TTTCGAAATCCTCCCACCAC+AGG | + | chr2_1:81721404-81721423 | None:intergenic | 50.0% | |
| GGTGGGAGGATTTCGAAAAG+TGG | - | chr2_1:81721406-81721425 | Msa0228480:CDS | 50.0% | |
| AGCAGCCATTATCCTAGGAC+GGG | + | chr2_1:81721682-81721701 | None:intergenic | 50.0% | |
| GAGCAGCCATTATCCTAGGA+CGG | + | chr2_1:81721683-81721702 | None:intergenic | 50.0% | |
| TGCTCCAGGTGTATATGCTG+TGG | + | chr2_1:81721852-81721871 | None:intergenic | 50.0% | |
| AGAAGCAGCTTTGCCTGTAC+TGG | - | chr2_1:81722379-81722398 | Msa0228480:CDS | 50.0% | |
| GAAGCAGCTTTGCCTGTACT+GGG | - | chr2_1:81722380-81722399 | Msa0228480:CDS | 50.0% | |
| AAGGCGAATTCGCGTCCACA+AGG | - | chr2_1:81721014-81721033 | Msa0228480:CDS | 55.0% | |
| ! | TTACCACTCGGTGAGCCTTG+TGG | + | chr2_1:81721032-81721051 | None:intergenic | 55.0% |
| ! | AAGGATTCTGGGAAGGTCGG+TGG | - | chr2_1:81721314-81721333 | Msa0228480:CDS | 55.0% |
| AGGTGGTAAGGATCCTGTGG+TGG | - | chr2_1:81721388-81721407 | Msa0228480:CDS | 55.0% | |
| GGTGGTAAGGATCCTGTGGT+GGG | - | chr2_1:81721389-81721408 | Msa0228480:CDS | 55.0% | |
| CGTTCGTCTGTGCAGCAAGA+TGG | - | chr2_1:81721531-81721550 | Msa0228480:CDS | 55.0% | |
| GGCATTATGGCTGGCATCTC+CGG | + | chr2_1:81722150-81722169 | None:intergenic | 55.0% | |
| ATTCAAGGCCTCGACCGAGT+AGG | + | chr2_1:81722496-81722515 | None:intergenic | 55.0% | |
| CTCGGTCGAGGCCTTGAATT+TGG | - | chr2_1:81722497-81722516 | Msa0228480:CDS | 55.0% | |
| AAGGCGAATTCGCGTCCACA+AGG | - | chr2_1:81721014-81721033 | Msa0228480:CDS | 55.0% | |
| ! | TTACCACTCGGTGAGCCTTG+TGG | + | chr2_1:81721032-81721051 | None:intergenic | 55.0% |
| ! | AAGGATTCTGGGAAGGTCGG+TGG | - | chr2_1:81721314-81721333 | Msa0228480:CDS | 55.0% |
| AGGTGGTAAGGATCCTGTGG+TGG | - | chr2_1:81721388-81721407 | Msa0228480:CDS | 55.0% | |
| GGTGGTAAGGATCCTGTGGT+GGG | - | chr2_1:81721389-81721408 | Msa0228480:CDS | 55.0% | |
| CGTTCGTCTGTGCAGCAAGA+TGG | - | chr2_1:81721531-81721550 | Msa0228480:CDS | 55.0% | |
| GGCATTATGGCTGGCATCTC+CGG | + | chr2_1:81722150-81722169 | None:intergenic | 55.0% | |
| ATTCAAGGCCTCGACCGAGT+AGG | + | chr2_1:81722496-81722515 | None:intergenic | 55.0% | |
| CTCGGTCGAGGCCTTGAATT+TGG | - | chr2_1:81722497-81722516 | Msa0228480:CDS | 55.0% | |
| ! | TGGGAAGGTCGGTGGTGTTG+AGG | - | chr2_1:81721322-81721341 | Msa0228480:CDS | 60.0% |
| ! | GTGGTGTTGAGGAGCCGTCT+TGG | - | chr2_1:81721333-81721352 | Msa0228480:CDS | 60.0% |
| GGTCGCTGAGGATAACTGGG+AGG | - | chr2_1:81721354-81721373 | Msa0228480:CDS | 60.0% | |
| ! | GGTAAGGATCCTGTGGTGGG+AGG | - | chr2_1:81721392-81721411 | Msa0228480:CDS | 60.0% |
| ACCGAGTAGGCGGCTGATAC+GGG | + | chr2_1:81722483-81722502 | None:intergenic | 60.0% | |
| GACCGAGTAGGCGGCTGATA+CGG | + | chr2_1:81722484-81722503 | None:intergenic | 60.0% | |
| ! | TGGGAAGGTCGGTGGTGTTG+AGG | - | chr2_1:81721322-81721341 | Msa0228480:CDS | 60.0% |
| ! | GTGGTGTTGAGGAGCCGTCT+TGG | - | chr2_1:81721333-81721352 | Msa0228480:CDS | 60.0% |
| GGTCGCTGAGGATAACTGGG+AGG | - | chr2_1:81721354-81721373 | Msa0228480:CDS | 60.0% | |
| ! | GGTAAGGATCCTGTGGTGGG+AGG | - | chr2_1:81721392-81721411 | Msa0228480:CDS | 60.0% |
| ACCGAGTAGGCGGCTGATAC+GGG | + | chr2_1:81722483-81722502 | None:intergenic | 60.0% | |
| GACCGAGTAGGCGGCTGATA+CGG | + | chr2_1:81722484-81722503 | None:intergenic | 60.0% | |
| CGTCCACAAGGCTCACCGAG+TGG | - | chr2_1:81721026-81721045 | Msa0228480:intron | 65.0% | |
| AGGAGCCGTCTTGGTCGCTG+AGG | - | chr2_1:81721342-81721361 | Msa0228480:CDS | 65.0% | |
| GCCCGTATCAGCCGCCTACT+CGG | - | chr2_1:81722479-81722498 | Msa0228480:CDS | 65.0% | |
| ATCAGCCGCCTACTCGGTCG+AGG | - | chr2_1:81722485-81722504 | Msa0228480:CDS | 65.0% | |
| CAAGGCCTCGACCGAGTAGG+CGG | + | chr2_1:81722493-81722512 | None:intergenic | 65.0% | |
| CGTCCACAAGGCTCACCGAG+TGG | - | chr2_1:81721026-81721045 | Msa0228480:intron | 65.0% | |
| AGGAGCCGTCTTGGTCGCTG+AGG | - | chr2_1:81721342-81721361 | Msa0228480:CDS | 65.0% | |
| GCCCGTATCAGCCGCCTACT+CGG | - | chr2_1:81722479-81722498 | Msa0228480:CDS | 65.0% | |
| ATCAGCCGCCTACTCGGTCG+AGG | - | chr2_1:81722485-81722504 | Msa0228480:CDS | 65.0% | |
| CAAGGCCTCGACCGAGTAGG+CGG | + | chr2_1:81722493-81722512 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 81720813 | 81722523 | 81720813 | ID=Msa0228480;Name=Msa0228480 |
| chr2_1 | mRNA | 81720813 | 81722523 | 81720813 | ID=Msa0228480-mRNA-1;Parent=Msa0228480;Name=Msa0228480-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0|0|0.66|1|0.66|3|0|507 |
| chr2_1 | exon | 81721944 | 81722523 | 81721944 | ID=Msa0228480-mRNA-1:exon:24472;Parent=Msa0228480-mRNA-1 |
| chr2_1 | exon | 81721129 | 81721846 | 81721129 | ID=Msa0228480-mRNA-1:exon:24471;Parent=Msa0228480-mRNA-1 |
| chr2_1 | exon | 81720813 | 81721035 | 81720813 | ID=Msa0228480-mRNA-1:exon:24470;Parent=Msa0228480-mRNA-1 |
| chr2_1 | CDS | 81721944 | 81722523 | 81721944 | ID=Msa0228480-mRNA-1:cds;Parent=Msa0228480-mRNA-1 |
| chr2_1 | CDS | 81721129 | 81721846 | 81721129 | ID=Msa0228480-mRNA-1:cds;Parent=Msa0228480-mRNA-1 |
| chr2_1 | CDS | 81720813 | 81721035 | 81720813 | ID=Msa0228480-mRNA-1:cds;Parent=Msa0228480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
