Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0342100 | XP_013451092.1 | 97.902 | 143 | 3 | 0 | 1 | 143 | 181 | 323 | 9.84e-97 | 291 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0342100 | sp|Q8BGF9|S2544_MOUSE | 36.923 | 130 | 69 | 3 | 1 | 130 | 191 | 307 | 5.95e-17 | 78.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006550 | Msa0342100 | 0.800648 | 1.306153e-48 | -8.615850e-47 |
| Msa0011720 | Msa0342100 | 0.808508 | 2.993029e-50 | -8.615850e-47 |
| Msa0014710 | Msa0342100 | 0.800522 | 1.385438e-48 | -8.615850e-47 |
| Msa0015300 | Msa0342100 | 0.802995 | 4.304403e-49 | -8.615850e-47 |
| Msa0017510 | Msa0342100 | 0.800957 | 1.129543e-48 | -8.615850e-47 |
| Msa0037880 | Msa0342100 | 0.805899 | 1.068354e-49 | -8.615850e-47 |
| Msa0071240 | Msa0342100 | 0.803152 | 3.994808e-49 | -8.615850e-47 |
| Msa0077200 | Msa0342100 | 0.802944 | 4.410432e-49 | -8.615850e-47 |
| Msa0079400 | Msa0342100 | 0.810667 | 1.028737e-50 | -8.615850e-47 |
| Msa0089360 | Msa0342100 | 0.812517 | 4.073294e-51 | -8.615850e-47 |
| Msa0092990 | Msa0342100 | 0.812358 | 4.413450e-51 | -8.615850e-47 |
| Msa0094920 | Msa0342100 | 0.804895 | 1.734202e-49 | -8.615850e-47 |
| Msa0095380 | Msa0342100 | 0.811366 | 7.256563e-51 | -8.615850e-47 |
| Msa0096450 | Msa0342100 | 0.802639 | 5.100203e-49 | -8.615850e-47 |
| Msa0097840 | Msa0342100 | 0.810410 | 1.168810e-50 | -8.615850e-47 |
| Msa0101710 | Msa0342100 | 0.807679 | 4.492313e-50 | -8.615850e-47 |
| Msa0115270 | Msa0342100 | 0.807023 | 6.189262e-50 | -8.615850e-47 |
| Msa0116770 | Msa0342100 | 0.805426 | 1.342358e-49 | -8.615850e-47 |
| Msa0120340 | Msa0342100 | 0.809815 | 1.570357e-50 | -8.615850e-47 |
| Msa0122590 | Msa0342100 | 0.823440 | 1.383275e-53 | -8.615850e-47 |
| Msa0141620 | Msa0342100 | 0.808977 | 2.375206e-50 | -8.615850e-47 |
| Msa0149000 | Msa0342100 | 0.801990 | 6.935478e-49 | -8.615850e-47 |
| Msa0157290 | Msa0342100 | 0.801248 | 9.848124e-49 | -8.615850e-47 |
| Msa0165210 | Msa0342100 | 0.810116 | 1.352695e-50 | -8.615850e-47 |
| Msa0165220 | Msa0342100 | 0.804922 | 1.711634e-49 | -8.615850e-47 |
| Msa0166870 | Msa0342100 | 0.825870 | 3.702511e-54 | -8.615850e-47 |
| Msa0173990 | Msa0342100 | 0.804531 | 2.065634e-49 | -8.615850e-47 |
| Msa0178960 | Msa0342100 | 0.806245 | 9.033069e-50 | -8.615850e-47 |
| Msa0183590 | Msa0342100 | 0.802159 | 6.403990e-49 | -8.615850e-47 |
| Msa0184020 | Msa0342100 | 0.814069 | 1.858742e-51 | -8.615850e-47 |
| Msa0188630 | Msa0342100 | 0.820240 | 7.615880e-53 | -8.615850e-47 |
| Msa0188680 | Msa0342100 | -0.801410 | 9.124694e-49 | -8.615850e-47 |
| Msa0205850 | Msa0342100 | 0.827609 | 1.423016e-54 | -8.615850e-47 |
| Msa0215320 | Msa0342100 | -0.810327 | 1.217996e-50 | -8.615850e-47 |
| Msa0220440 | Msa0342100 | 0.809965 | 1.457399e-50 | -8.615850e-47 |
| Msa0220580 | Msa0342100 | 0.801743 | 7.796859e-49 | -8.615850e-47 |
| Msa0226890 | Msa0342100 | 0.817312 | 3.520493e-52 | -8.615850e-47 |
| Msa0228480 | Msa0342100 | 0.800127 | 1.667454e-48 | -8.615850e-47 |
| Msa0236980 | Msa0342100 | 0.800444 | 1.436883e-48 | -8.615850e-47 |
| Msa0245940 | Msa0342100 | 0.809430 | 1.899538e-50 | -8.615850e-47 |
| Msa0258760 | Msa0342100 | 0.807385 | 5.186059e-50 | -8.615850e-47 |
| Msa0260210 | Msa0342100 | 0.804943 | 1.694634e-49 | -8.615850e-47 |
| Msa0269450 | Msa0342100 | 0.819378 | 1.198665e-52 | -8.615850e-47 |
| Msa0270220 | Msa0342100 | -0.802693 | 4.970563e-49 | -8.615850e-47 |
| Msa0270270 | Msa0342100 | 0.805880 | 1.078060e-49 | -8.615850e-47 |
| Msa0279790 | Msa0342100 | 0.808020 | 3.802325e-50 | -8.615850e-47 |
| Msa0282250 | Msa0342100 | 0.823375 | 1.432827e-53 | -8.615850e-47 |
| Msa0284520 | Msa0342100 | 0.800474 | 1.417096e-48 | -8.615850e-47 |
| Msa0287310 | Msa0342100 | 0.809950 | 1.468697e-50 | -8.615850e-47 |
| Msa0288100 | Msa0342100 | 0.802647 | 5.079431e-49 | -8.615850e-47 |
| Msa0296160 | Msa0342100 | 0.810831 | 9.477635e-51 | -8.615850e-47 |
| Msa0304290 | Msa0342100 | 0.807673 | 4.507046e-50 | -8.615850e-47 |
| Msa0304330 | Msa0342100 | 0.808747 | 2.660393e-50 | -8.615850e-47 |
| Msa0307830 | Msa0342100 | -0.824010 | 1.017371e-53 | -8.615850e-47 |
| Msa0315290 | Msa0342100 | 0.827427 | 1.574226e-54 | -8.615850e-47 |
| Msa0317510 | Msa0342100 | 0.800116 | 1.676148e-48 | -8.615850e-47 |
| Msa0319170 | Msa0342100 | 0.814709 | 1.342021e-51 | -8.615850e-47 |
| Msa0320100 | Msa0342100 | 0.805530 | 1.276806e-49 | -8.615850e-47 |
| Msa0320740 | Msa0342100 | 0.804361 | 2.241463e-49 | -8.615850e-47 |
| Msa0323080 | Msa0342100 | 0.825998 | 3.451846e-54 | -8.615850e-47 |
| Msa0323180 | Msa0342100 | 0.811111 | 8.242604e-51 | -8.615850e-47 |
| Msa0323610 | Msa0342100 | 0.800921 | 1.148921e-48 | -8.615850e-47 |
| Msa0325850 | Msa0342100 | 0.809978 | 1.448082e-50 | -8.615850e-47 |
| Msa0328210 | Msa0342100 | 0.800606 | 1.331682e-48 | -8.615850e-47 |
| Msa0334570 | Msa0342100 | 0.815093 | 1.103042e-51 | -8.615850e-47 |
| Msa0335040 | Msa0342100 | 0.810983 | 8.788799e-51 | -8.615850e-47 |
| Msa0337060 | Msa0342100 | 0.802271 | 6.071324e-49 | -8.615850e-47 |
| Msa0342100 | Msa0344830 | 0.824978 | 6.022672e-54 | -8.615850e-47 |
| Msa0342100 | Msa0344870 | 0.812225 | 4.719774e-51 | -8.615850e-47 |
| Msa0342100 | Msa0347360 | 0.813101 | 3.034810e-51 | -8.615850e-47 |
| Msa0342100 | Msa0350990 | 0.824671 | 7.114791e-54 | -8.615850e-47 |
| Msa0342100 | Msa0351030 | 0.823562 | 1.295763e-53 | -8.615850e-47 |
| Msa0342100 | Msa0351080 | 0.801117 | 1.047349e-48 | -8.615850e-47 |
| Msa0342100 | Msa0351100 | 0.824123 | 9.570614e-54 | -8.615850e-47 |
| Msa0342100 | Msa0351810 | 0.827414 | 1.585323e-54 | -8.615850e-47 |
| Msa0342100 | Msa0359030 | 0.808011 | 3.818285e-50 | -8.615850e-47 |
| Msa0342100 | Msa0365490 | 0.803581 | 3.255934e-49 | -8.615850e-47 |
| Msa0342100 | Msa0372660 | 0.801107 | 1.052441e-48 | -8.615850e-47 |
| Msa0342100 | Msa0376590 | 0.802263 | 6.095212e-49 | -8.615850e-47 |
| Msa0342100 | Msa0379640 | 0.806952 | 6.406729e-50 | -8.615850e-47 |
| Msa0342100 | Msa0380040 | 0.820766 | 5.766872e-53 | -8.615850e-47 |
| Msa0342100 | Msa0388960 | 0.815237 | 1.024794e-51 | -8.615850e-47 |
| Msa0342100 | Msa0389810 | 0.807608 | 4.652521e-50 | -8.615850e-47 |
| Msa0342100 | Msa0395790 | 0.802910 | 4.484119e-49 | -8.615850e-47 |
| Msa0342100 | Msa0398950 | 0.806414 | 8.320312e-50 | -8.615850e-47 |
| Msa0342100 | Msa0399340 | 0.801099 | 1.056405e-48 | -8.615850e-47 |
| Msa0342100 | Msa0406880 | 0.811290 | 7.537167e-51 | -8.615850e-47 |
| Msa0342100 | Msa0416300 | 0.803863 | 2.845025e-49 | -8.615850e-47 |
| Msa0342100 | Msa0419820 | 0.802405 | 5.697974e-49 | -8.615850e-47 |
| Msa0342100 | Msa0426330 | 0.826902 | 2.102135e-54 | -8.615850e-47 |
| Msa0342100 | Msa0429290 | 0.816902 | 4.351702e-52 | -8.615850e-47 |
| Msa0342100 | Msa0431670 | 0.838113 | 3.486679e-57 | -8.615850e-47 |
| Msa0342100 | Msa0438200 | 0.849022 | 4.220795e-60 | -8.615850e-47 |
| Msa0342100 | Msa0458440 | 0.822467 | 2.332679e-53 | -8.615850e-47 |
| Msa0342100 | Msa0466390 | 0.827629 | 1.407824e-54 | -8.615850e-47 |
| Msa0342100 | Msa0468130 | 0.800146 | 1.652906e-48 | -8.615850e-47 |
| Msa0342100 | Msa0469290 | 0.803546 | 3.310803e-49 | -8.615850e-47 |
| Msa0342100 | Msa0473240 | 0.831211 | 1.897737e-55 | -8.615850e-47 |
| Msa0342100 | Msa0475580 | 0.810623 | 1.051551e-50 | -8.615850e-47 |
| Msa0342100 | Msa0484780 | 0.829736 | 4.356826e-55 | -8.615850e-47 |
| Msa0342100 | Msa0489790 | 0.804385 | 2.215845e-49 | -8.615850e-47 |
| Msa0342100 | Msa0495320 | 0.800047 | 1.730764e-48 | -8.615850e-47 |
| Msa0342100 | Msa0509390 | 0.810421 | 1.162581e-50 | -8.615850e-47 |
| Msa0342100 | Msa0512750 | 0.817211 | 3.708300e-52 | -8.615850e-47 |
| Msa0342100 | Msa0519220 | 0.810146 | 1.332832e-50 | -8.615850e-47 |
| Msa0342100 | Msa0526890 | 0.810170 | 1.316641e-50 | -8.615850e-47 |
| Msa0342100 | Msa0529040 | 0.801847 | 7.421010e-49 | -8.615850e-47 |
| Msa0342100 | Msa0535030 | 0.836175 | 1.091394e-56 | -8.615850e-47 |
| Msa0342100 | Msa0535060 | 0.837625 | 4.655586e-57 | -8.615850e-47 |
| Msa0342100 | Msa0553220 | -0.811197 | 7.897992e-51 | -8.615850e-47 |
| Msa0342100 | Msa0562440 | 0.823350 | 1.452389e-53 | -8.615850e-47 |
| Msa0342100 | Msa0563840 | 0.800131 | 1.664151e-48 | -8.615850e-47 |
| Msa0342100 | Msa0568820 | 0.811654 | 6.282637e-51 | -8.615850e-47 |
| Msa0342100 | Msa0575470 | 0.804546 | 2.050653e-49 | -8.615850e-47 |
| Msa0342100 | Msa0577220 | 0.800238 | 1.582515e-48 | -8.615850e-47 |
| Msa0342100 | Msa0585900 | 0.814726 | 1.330264e-51 | -8.615850e-47 |
| Msa0342100 | Msa0591060 | 0.815211 | 1.038631e-51 | -8.615850e-47 |
| Msa0342100 | Msa0591770 | 0.819603 | 1.065157e-52 | -8.615850e-47 |
| Msa0342100 | Msa0598460 | 0.831553 | 1.563806e-55 | -8.615850e-47 |
| Msa0342100 | Msa0610430 | 0.808740 | 2.669869e-50 | -8.615850e-47 |
| Msa0342100 | Msa0619070 | 0.808558 | 2.919927e-50 | -8.615850e-47 |
| Msa0342100 | Msa0621590 | 0.822444 | 2.360655e-53 | -8.615850e-47 |
| Msa0342100 | Msa0623080 | 0.803058 | 4.177371e-49 | -8.615850e-47 |
| Msa0342100 | Msa0628740 | 0.802429 | 5.633109e-49 | -8.615850e-47 |
| Msa0342100 | Msa0638070 | 0.806271 | 8.918451e-50 | -8.615850e-47 |
| Msa0342100 | Msa0638280 | 0.820621 | 6.227336e-53 | -8.615850e-47 |
| Msa0342100 | Msa0638320 | 0.812621 | 3.866325e-51 | -8.615850e-47 |
| Msa0342100 | Msa0638610 | 0.806348 | 8.593319e-50 | -8.615850e-47 |
| Msa0342100 | Msa0647450 | -0.821774 | 3.375864e-53 | -8.615850e-47 |
| Msa0342100 | Msa0650190 | 0.810184 | 1.307356e-50 | -8.615850e-47 |
| Msa0342100 | Msa0657750 | 0.817181 | 3.767484e-52 | -8.615850e-47 |
| Msa0342100 | Msa0660300 | 0.813282 | 2.769488e-51 | -8.615850e-47 |
| Msa0342100 | Msa0662650 | 0.819200 | 1.315672e-52 | -8.615850e-47 |
| Msa0342100 | Msa0663380 | 0.801189 | 1.012444e-48 | -8.615850e-47 |
| Msa0342100 | Msa0663920 | 0.809872 | 1.526404e-50 | -8.615850e-47 |
| Msa0342100 | Msa0666140 | 0.802853 | 4.605858e-49 | -8.615850e-47 |
| Msa0342100 | Msa0669850 | 0.829576 | 4.764679e-55 | -8.615850e-47 |
| Msa0342100 | Msa0673010 | -0.819697 | 1.013803e-52 | -8.615850e-47 |
| Msa0342100 | Msa0673460 | 0.806976 | 6.330838e-50 | -8.615850e-47 |
| Msa0342100 | Msa0677270 | 0.808190 | 3.498649e-50 | -8.615850e-47 |
| Msa0342100 | Msa0681800 | 0.805411 | 1.352398e-49 | -8.615850e-47 |
| Msa0342100 | Msa0690520 | 0.800982 | 1.115980e-48 | -8.615850e-47 |
| Msa0342100 | Msa0692830 | 0.800466 | 1.422454e-48 | -8.615850e-47 |
| Msa0342100 | Msa0692950 | 0.810151 | 1.329006e-50 | -8.615850e-47 |
| Msa0342100 | Msa0708860 | 0.814923 | 1.203010e-51 | -8.615850e-47 |
| Msa0342100 | Msa0724830 | 0.810931 | 9.017674e-51 | -8.615850e-47 |
| Msa0342100 | Msa0735170 | 0.803888 | 2.812061e-49 | -8.615850e-47 |
| Msa0342100 | Msa0743260 | 0.801963 | 7.026698e-49 | -8.615850e-47 |
| Msa0342100 | Msa0743720 | 0.832946 | 7.071871e-56 | -8.615850e-47 |
| Msa0342100 | Msa0756310 | 0.801200 | 1.007404e-48 | -8.615850e-47 |
| Msa0342100 | Msa0767220 | 0.800544 | 1.371339e-48 | -8.615850e-47 |
| Msa0342100 | Msa0771720 | 0.816335 | 5.831776e-52 | -8.615850e-47 |
| Msa0342100 | Msa0777230 | 0.807747 | 4.346408e-50 | -8.615850e-47 |
| Msa0342100 | Msa0777570 | -0.803525 | 3.344151e-49 | -8.615850e-47 |
| Msa0342100 | Msa0790390 | -0.801525 | 8.641337e-49 | -8.615850e-47 |
| Msa0342100 | Msa0792090 | 0.815845 | 7.504284e-52 | -8.615850e-47 |
| Msa0342100 | Msa0794510 | -0.811824 | 5.770463e-51 | -8.615850e-47 |
| Msa0342100 | Msa0798860 | 0.801548 | 8.546700e-49 | -8.615850e-47 |
| Msa0342100 | Msa0824680 | 0.822479 | 2.316944e-53 | -8.615850e-47 |
| Msa0342100 | Msa0828920 | 0.813788 | 2.144000e-51 | -8.615850e-47 |
| Msa0342100 | Msa0835730 | 0.805447 | 1.328987e-49 | -8.615850e-47 |
| Msa0342100 | Msa0849030 | 0.802685 | 4.989615e-49 | -8.615850e-47 |
| Msa0342100 | Msa0850960 | 0.811504 | 6.774083e-51 | -8.615850e-47 |
| Msa0342100 | Msa0863870 | 0.820634 | 6.183553e-53 | -8.615850e-47 |
| Msa0342100 | Msa0869120 | 0.807538 | 4.813578e-50 | -8.615850e-47 |
| Msa0342100 | Msa0874670 | 0.854847 | 9.372347e-62 | -8.615850e-47 |
| Msa0342100 | Msa0876200 | 0.808376 | 3.192532e-50 | -8.615850e-47 |
| Msa0342100 | Msa0876580 | 0.806012 | 1.011318e-49 | -8.615850e-47 |
| Msa0342100 | Msa0877410 | 0.820257 | 7.547140e-53 | -8.615850e-47 |
| Msa0342100 | Msa0881020 | 0.811268 | 7.621721e-51 | -8.615850e-47 |
| Msa0342100 | Msa0881030 | 0.819400 | 1.184883e-52 | -8.615850e-47 |
| Msa0342100 | Msa0893810 | 0.814961 | 1.179981e-51 | -8.615850e-47 |
| Msa0342100 | Msa0896220 | 0.823497 | 1.341685e-53 | -8.615850e-47 |
| Msa0342100 | Msa0896750 | 0.803820 | 2.903876e-49 | -8.615850e-47 |
| Msa0342100 | Msa0898670 | 0.814721 | 1.334024e-51 | -8.615850e-47 |
| Msa0342100 | Msa0899230 | 0.817547 | 3.116850e-52 | -8.615850e-47 |
| Msa0342100 | Msa0908170 | 0.804941 | 1.695856e-49 | -8.615850e-47 |
| Msa0342100 | Msa0910980 | -0.822956 | 1.794313e-53 | -8.615850e-47 |
| Msa0342100 | Msa0923330 | 0.804604 | 1.994722e-49 | -8.615850e-47 |
| Msa0342100 | Msa0927670 | 0.819752 | 9.848438e-53 | -8.615850e-47 |
| Msa0342100 | Msa0933100 | 0.818927 | 1.518048e-52 | -8.615850e-47 |
| Msa0342100 | Msa0933230 | 0.813903 | 2.022119e-51 | -8.615850e-47 |
| Msa0342100 | Msa0933310 | 0.808397 | 3.159883e-50 | -8.615850e-47 |
| Msa0342100 | Msa0937670 | 0.807678 | 4.494260e-50 | -8.615850e-47 |
| Msa0342100 | Msa0939790 | 0.814008 | 1.917626e-51 | -8.615850e-47 |
| Msa0342100 | Msa0954550 | 0.803179 | 3.944867e-49 | -8.615850e-47 |
| Msa0342100 | Msa0959010 | 0.815300 | 9.920220e-52 | -8.615850e-47 |
| Msa0342100 | Msa0960160 | 0.831339 | 1.765263e-55 | -8.615850e-47 |
| Msa0342100 | Msa0969520 | 0.832618 | 8.528054e-56 | -8.615850e-47 |
| Msa0342100 | Msa0982270 | 0.805900 | 1.067533e-49 | -8.615850e-47 |
| Msa0342100 | Msa0992490 | -0.809087 | 2.250542e-50 | -8.615850e-47 |
| Msa0342100 | Msa0993530 | 0.837831 | 4.121844e-57 | -8.615850e-47 |
| Msa0342100 | Msa0999040 | 0.801256 | 9.812556e-49 | -8.615850e-47 |
| Msa0342100 | Msa0999100 | 0.812480 | 4.150866e-51 | -8.615850e-47 |
| Msa0342100 | Msa1026760 | 0.823317 | 1.478500e-53 | -8.615850e-47 |
| Msa0342100 | Msa1026790 | 0.814158 | 1.776156e-51 | -8.615850e-47 |
| Msa0342100 | Msa1037700 | -0.817312 | 3.520493e-52 | -8.615850e-47 |
| Msa0342100 | Msa1039880 | 0.819235 | 1.291753e-52 | -8.615850e-47 |
| Msa0342100 | Msa1046300 | 0.844618 | 6.762045e-59 | -8.615850e-47 |
| Msa0342100 | Msa1052830 | 0.802604 | 5.185005e-49 | -8.615850e-47 |
| Msa0342100 | Msa1075220 | -0.817768 | 2.778357e-52 | -8.615850e-47 |
| Msa0342100 | Msa1082500 | 0.834065 | 3.717259e-56 | -8.615850e-47 |
| Msa0342100 | Msa1082580 | 0.802022 | 6.831559e-49 | -8.615850e-47 |
| Msa0342100 | Msa1085300 | 0.814355 | 1.606886e-51 | -8.615850e-47 |
| Msa0342100 | Msa1087470 | 0.808083 | 3.685669e-50 | -8.615850e-47 |
| Msa0342100 | Msa1090260 | 0.818760 | 1.656854e-52 | -8.615850e-47 |
| Msa0342100 | Msa1092090 | 0.815185 | 1.052469e-51 | -8.615850e-47 |
| Msa0342100 | Msa1116130 | -0.811418 | 7.069965e-51 | -8.615850e-47 |
| Msa0342100 | Msa1116690 | 0.803766 | 2.980336e-49 | -8.615850e-47 |
| Msa0342100 | Msa1130210 | -0.815537 | 8.785304e-52 | -8.615850e-47 |
| Msa0342100 | Msa1131220 | 0.803260 | 3.795752e-49 | -8.615850e-47 |
| Msa0342100 | Msa1131940 | -0.813285 | 2.765860e-51 | -8.615850e-47 |
| Msa0342100 | Msa1137570 | 0.816988 | 4.163014e-52 | -8.615850e-47 |
| Msa0342100 | Msa1143270 | 0.800146 | 1.652538e-48 | -8.615850e-47 |
| Msa0342100 | Msa1147900 | 0.813066 | 3.088553e-51 | -8.615850e-47 |
| Msa0342100 | Msa1162550 | -0.827183 | 1.800755e-54 | -8.615850e-47 |
| Msa0342100 | Msa1170280 | 0.804399 | 2.200715e-49 | -8.615850e-47 |
| Msa0342100 | Msa1172670 | 0.807394 | 5.165168e-50 | -8.615850e-47 |
| Msa0342100 | Msa1174040 | 0.826291 | 2.940019e-54 | -8.615850e-47 |
| Msa0342100 | Msa1179460 | 0.808345 | 3.242593e-50 | -8.615850e-47 |
| Msa0342100 | Msa1185540 | 0.807448 | 5.029070e-50 | -8.615850e-47 |
| Msa0342100 | Msa1193290 | 0.805505 | 1.292119e-49 | -8.615850e-47 |
| Msa0342100 | Msa1199220 | 0.821968 | 3.044823e-53 | -8.615850e-47 |
| Msa0342100 | Msa1199560 | 0.817602 | 3.028369e-52 | -8.615850e-47 |
| Msa0342100 | Msa1199620 | 0.822059 | 2.900955e-53 | -8.615850e-47 |
| Msa0342100 | Msa1201120 | 0.801672 | 8.061992e-49 | -8.615850e-47 |
| Msa0342100 | Msa1205130 | 0.805558 | 1.259477e-49 | -8.615850e-47 |
| Msa0342100 | Msa1206020 | 0.801421 | 9.075553e-49 | -8.615850e-47 |
| Msa0342100 | Msa1211150 | -0.814990 | 1.162299e-51 | -8.615850e-47 |
| Msa0342100 | Msa1217660 | 0.807152 | 5.811475e-50 | -8.615850e-47 |
| Msa0342100 | Msa1217830 | 0.839573 | 1.461910e-57 | -8.615850e-47 |
| Msa0342100 | Msa1228890 | 0.800027 | 1.747407e-48 | -8.615850e-47 |
| Msa0342100 | Msa1233500 | 0.828287 | 9.776618e-55 | -8.615850e-47 |
| Msa0342100 | Msa1233890 | 0.836340 | 9.910845e-57 | -8.615850e-47 |
| Msa0342100 | Msa1235740 | 0.832180 | 1.095322e-55 | -8.615850e-47 |
| Msa0342100 | Msa1239530 | 0.804743 | 1.865428e-49 | -8.615850e-47 |
| Msa0342100 | Msa1267260 | 0.809873 | 1.525425e-50 | -8.615850e-47 |
| Msa0342100 | Msa1267840 | 0.827740 | 1.323652e-54 | -8.615850e-47 |
| Msa0342100 | Msa1271210 | 0.824452 | 8.010095e-54 | -8.615850e-47 |
| Msa0342100 | Msa1275360 | 0.802292 | 6.013155e-49 | -8.615850e-47 |
| Msa0342100 | Msa1276440 | 0.822721 | 2.035912e-53 | -8.615850e-47 |
| Msa0342100 | Msa1279210 | 0.827591 | 1.437383e-54 | -8.615850e-47 |
| Msa0342100 | Msa1284680 | 0.806181 | 9.320015e-50 | -8.615850e-47 |
| Msa0342100 | Msa1299300 | -0.810061 | 1.389723e-50 | -8.615850e-47 |
| Msa0342100 | Msa1300350 | -0.802132 | 6.486775e-49 | -8.615850e-47 |
| Msa0342100 | Msa1306750 | 0.833547 | 5.009331e-56 | -8.615850e-47 |
| Msa0342100 | Msa1306760 | 0.804671 | 1.931383e-49 | -8.615850e-47 |
| Msa0342100 | Msa1313150 | 0.810160 | 1.323267e-50 | -8.615850e-47 |
| Msa0342100 | Msa1314340 | 0.838755 | 2.381967e-57 | -8.615850e-47 |
| Msa0342100 | Msa1318120 | 0.802985 | 4.326901e-49 | -8.615850e-47 |
| Msa0342100 | Msa1322190 | 0.800853 | 1.185741e-48 | -8.615850e-47 |
| Msa0342100 | Msa1328700 | 0.824736 | 6.867305e-54 | -8.615850e-47 |
| Msa0342100 | Msa1336710 | 0.827971 | 1.164707e-54 | -8.615850e-47 |
| Msa0342100 | Msa1340020 | 0.822154 | 2.756907e-53 | -8.615850e-47 |
| Msa0342100 | Msa1340650 | 0.821384 | 4.154627e-53 | -8.615850e-47 |
| Msa0342100 | Msa1345220 | 0.803672 | 3.117075e-49 | -8.615850e-47 |
| Msa0342100 | Msa1348360 | 0.812567 | 3.973677e-51 | -8.615850e-47 |
| Msa0342100 | Msa1348950 | 0.813846 | 2.081612e-51 | -8.615850e-47 |
| Msa0342100 | Msa1351620 | 0.803258 | 3.798430e-49 | -8.615850e-47 |
| Msa0342100 | Msa1353470 | 0.818945 | 1.503828e-52 | -8.615850e-47 |
| Msa0342100 | Msa1359040 | 0.824971 | 6.043391e-54 | -8.615850e-47 |
| Msa0342100 | Msa1359650 | -0.816963 | 4.216790e-52 | -8.615850e-47 |
| Msa0342100 | Msa1362510 | 0.820625 | 6.213638e-53 | -8.615850e-47 |
| Msa0342100 | Msa1362880 | 0.811266 | 7.628545e-51 | -8.615850e-47 |
| Msa0342100 | Msa1369530 | 0.824021 | 1.011420e-53 | -8.615850e-47 |
| Msa0342100 | Msa1394730 | 0.847586 | 1.052758e-59 | -8.615850e-47 |
| Msa0342100 | Msa1403580 | -0.806487 | 8.033769e-50 | -8.615850e-47 |
| Msa0342100 | Msa1408790 | 0.811216 | 7.821679e-51 | -8.615850e-47 |
| Msa0342100 | Msa1416390 | 0.805508 | 1.290466e-49 | -8.615850e-47 |
| Msa0342100 | Msa1423880 | 0.811516 | 6.734432e-51 | -8.615850e-47 |
| Msa0342100 | Msa1427230 | 0.808711 | 2.707444e-50 | -8.615850e-47 |
| Msa0342100 | Msa1436040 | 0.806354 | 8.566335e-50 | -8.615850e-47 |
| Msa0342100 | Msa1441190 | 0.836015 | 1.198707e-56 | -8.615850e-47 |
| Msa0342100 | Msa1443290 | -0.817414 | 3.338516e-52 | -8.615850e-47 |
| Msa0342100 | Msa1451620 | -0.807280 | 5.460245e-50 | -8.615850e-47 |
| Msa0342100 | Msa1460830 | 0.803972 | 2.700997e-49 | -8.615850e-47 |
| Msa0342100 | Msa1461300 | 0.805369 | 1.380174e-49 | -8.615850e-47 |
| Msa0342100 | Msa1466460 | 0.824396 | 8.257747e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0342100 | MtrunA17_Chr6g0455381 | 97.902 | 143 | 3 | 0 | 1 | 143 | 181 | 323 | 9.05e-101 | 291 |
| Msa0342100 | MtrunA17_Chr7g0219891 | 78.462 | 130 | 28 | 0 | 1 | 130 | 185 | 314 | 8.02e-73 | 220 |
| Msa0342100 | MtrunA17_Chr2g0293621 | 51.163 | 129 | 56 | 3 | 4 | 128 | 196 | 321 | 6.66e-39 | 134 |
| Msa0342100 | MtrunA17_Chr8g0343381 | 43.046 | 151 | 68 | 3 | 1 | 133 | 201 | 351 | 8.80e-33 | 118 |
| Msa0342100 | MtrunA17_Chr3g0136041 | 39.310 | 145 | 74 | 2 | 1 | 131 | 204 | 348 | 1.39e-28 | 107 |
| Msa0342100 | MtrunA17_Chr7g0269701 | 37.624 | 101 | 55 | 5 | 39 | 132 | 15 | 114 | 3.08e-12 | 62.4 |
| Msa0342100 | MtrunA17_Chr6g0463351 | 38.272 | 81 | 41 | 1 | 49 | 120 | 255 | 335 | 3.57e-12 | 62.4 |
| Msa0342100 | MtrunA17_Chr8g0386871 | 40.000 | 80 | 45 | 1 | 49 | 125 | 507 | 586 | 6.39e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0342100 | AT5G15640.1 | 75.758 | 132 | 30 | 2 | 1 | 130 | 192 | 323 | 1.72e-64 | 199 |
| Msa0342100 | AT5G15640.2 | 75.758 | 132 | 30 | 2 | 1 | 130 | 185 | 316 | 1.77e-64 | 199 |
| Msa0342100 | AT1G72820.1 | 45.098 | 153 | 68 | 3 | 1 | 137 | 197 | 349 | 8.06e-36 | 126 |
| Msa0342100 | AT1G72820.2 | 45.098 | 153 | 68 | 3 | 1 | 137 | 197 | 349 | 8.06e-36 | 126 |
| Msa0342100 | AT5G26200.1 | 44.526 | 137 | 66 | 3 | 1 | 131 | 210 | 342 | 1.58e-28 | 107 |
| Msa0342100 | AT4G11440.1 | 36.559 | 93 | 55 | 2 | 34 | 123 | 509 | 600 | 2.57e-11 | 60.5 |
| Msa0342100 | AT4G11440.2 | 36.559 | 93 | 55 | 2 | 34 | 123 | 509 | 600 | 2.57e-11 | 60.5 |
| Msa0342100 | AT5G42130.1 | 36.735 | 98 | 36 | 3 | 49 | 124 | 307 | 400 | 8.50e-11 | 58.9 |
Find 46 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAACTCAATTTACATAGTT+TGG | 0.162384 | 2_4:+64033179 | None:intergenic |
| TTTGTGGGATGAGTTGATTT+TGG | 0.293978 | 2_4:-64033155 | Msa0342100:three_prime_UTR |
| TTAGACAATTATCTTGGATT+AGG | 0.301617 | 2_4:-64032944 | Msa0342100:three_prime_UTR |
| TAGTCTGCCAAAGATTGTTT+TGG | 0.312137 | 2_4:-64034611 | Msa0342100:CDS |
| ATGGGGTACTTCAATGATAT+TGG | 0.313800 | 2_4:-64033804 | Msa0342100:CDS |
| AGGAGTACCTTTCTCAGATT+TGG | 0.314142 | 2_4:+64034633 | None:intergenic |
| GCCTGAACCAAAACAATCTT+TGG | 0.320437 | 2_4:+64034604 | None:intergenic |
| AAAGGTTTATATAGAGGATT+AGG | 0.325908 | 2_4:-64033851 | Msa0342100:CDS |
| GCTCAAGTCAACGCTTCTTA+TGG | 0.333157 | 2_4:-64035366 | Msa0342100:CDS |
| AAACTCAATTTACATAGTTT+GGG | 0.343066 | 2_4:+64033180 | None:intergenic |
| GATGTGGGATGAGTTGATTT+TGG | 0.365754 | 2_4:-64033133 | Msa0342100:three_prime_UTR |
| AATTAACCCATAACAATGTT+AGG | 0.366683 | 2_4:+64032910 | None:intergenic |
| TACAATCAAGACTCGGTTAC+AGG | 0.372914 | 2_4:-64034527 | Msa0342100:intron |
| TCAACTGATTAGCCAAGATA+TGG | 0.373942 | 2_4:-64033204 | Msa0342100:exon |
| CATAGTTTGGGACCATATCT+TGG | 0.375572 | 2_4:+64033192 | None:intergenic |
| GCTGACATGCTGACAAATCT+TGG | 0.376196 | 2_4:+64033827 | None:intergenic |
| AAATCCAATGTTCAAGTTGT+AGG | 0.385322 | 2_4:+64033080 | None:intergenic |
| TGGGTTAATTATTGTACAAT+GGG | 0.393887 | 2_4:-64032897 | Msa0342100:three_prime_UTR |
| TGCTCCTACAACTTGAACAT+TGG | 0.400067 | 2_4:-64033084 | Msa0342100:three_prime_UTR |
| ATTCACCATCTAGCGCTGTT+TGG | 0.406563 | 2_4:-64035402 | Msa0342100:CDS |
| CACCATCTAGCGCTGTTTGG+TGG | 0.425293 | 2_4:-64035399 | Msa0342100:CDS |
| TCAGGAAATAATCATTGGAT+TGG | 0.432268 | 2_4:-64033017 | Msa0342100:three_prime_UTR |
| GGTTGGAAAGGTTTATATAG+AGG | 0.447603 | 2_4:-64033857 | Msa0342100:CDS |
| GAAGCGTTTGGTCAGCAATC+TGG | 0.451010 | 2_4:-64033234 | Msa0342100:CDS |
| GCCCACCAAACAGCGCTAGA+TGG | 0.463527 | 2_4:+64035397 | None:intergenic |
| ATGGGTTAATTATTGTACAA+TGG | 0.465694 | 2_4:-64032898 | Msa0342100:three_prime_UTR |
| AATTGATCAGTGAGGATGGT+TGG | 0.475537 | 2_4:-64033874 | Msa0342100:CDS |
| ATCAGTGAGGATGGTTGGAA+AGG | 0.492374 | 2_4:-64033869 | Msa0342100:CDS |
| GATTTGTCAGCATGTCAGCA+TGG | 0.509157 | 2_4:-64033823 | Msa0342100:CDS |
| GCTGTTTGGTGGGCAAGTTA+CGG | 0.509649 | 2_4:-64035388 | Msa0342100:CDS |
| GCAAAAGATGAAGAAGCGTT+TGG | 0.511322 | 2_4:-64033246 | Msa0342100:CDS |
| ACCATCTAGCGCTGTTTGGT+GGG | 0.512623 | 2_4:-64035398 | Msa0342100:CDS |
| AAAACAATCTTTGGCAGACT+AGG | 0.516654 | 2_4:+64034613 | None:intergenic |
| GTGATGGGACATGGAAAGAA+AGG | 0.519328 | 2_4:-64033920 | Msa0342100:CDS |
| ATTTGTCAGCATGTCAGCAT+GGG | 0.524386 | 2_4:-64033822 | Msa0342100:CDS |
| CGAGTCTTGATTGTATCCAA+TGG | 0.544870 | 2_4:+64034535 | None:intergenic |
| GCACCACAGGTGATGGGACA+TGG | 0.548711 | 2_4:-64033929 | Msa0342100:intron |
| TTGCTTGCACCACAGGTGAT+GGG | 0.584312 | 2_4:-64033935 | Msa0342100:intron |
| ATCGTGCATTACAACTCCAT+TGG | 0.587880 | 2_4:-64034551 | Msa0342100:CDS |
| GTTAATTATTGTACAATGGG+AGG | 0.588794 | 2_4:-64032894 | Msa0342100:three_prime_UTR |
| CAAGTCAACGCTTCTTATGG+AGG | 0.592490 | 2_4:-64035363 | Msa0342100:intron |
| GATGACGCCAAATCTGAGAA+AGG | 0.599009 | 2_4:-64034640 | Msa0342100:CDS |
| AAAGAATTGATCAGTGAGGA+TGG | 0.605272 | 2_4:-64033878 | Msa0342100:CDS |
| CATTGGATACAATCAAGACT+CGG | 0.643386 | 2_4:-64034534 | Msa0342100:CDS |
| TGTTAAAGAATTGATCAGTG+AGG | 0.667195 | 2_4:-64033882 | Msa0342100:CDS |
| TTTGTCAGCATGTCAGCATG+GGG | 0.695351 | 2_4:-64033821 | Msa0342100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTACTAATAATGATT+TGG | - | chr2_4:64033782-64033801 | Msa0342100:intron | 10.0% |
| !! | AATGAATAAGTATTCAATTT+AGG | - | chr2_4:64032935-64032954 | Msa0342100:three_prime_UTR | 15.0% |
| !!! | CTCTTTTTTGAAATAAATTA+AGG | - | chr2_4:64034168-64034187 | Msa0342100:intron | 15.0% |
| !!! | GAAAATAATATTTTTCCAAT+AGG | + | chr2_4:64035289-64035308 | None:intergenic | 15.0% |
| !!! | ATTTTTTTAGACAATTATCT+TGG | - | chr2_4:64035309-64035328 | Msa0342100:intron | 15.0% |
| !! | TGATATAATACAGAAACTAA+AGG | + | chr2_4:64032981-64033000 | None:intergenic | 20.0% |
| !!! | CAAAATCTGTATTTGATTTT+AGG | + | chr2_4:64033287-64033306 | None:intergenic | 20.0% |
| !! | AAAAGGAAAAAAACTAATCT+CGG | + | chr2_4:64033465-64033484 | None:intergenic | 20.0% |
| !! | TATGCATACTATCAATATTA+AGG | - | chr2_4:64033559-64033578 | Msa0342100:intron | 20.0% |
| !! | GATAAATGATAGTATTATAC+AGG | + | chr2_4:64034928-64034947 | None:intergenic | 20.0% |
| !! | AAACTCAATTTACATAGTTT+GGG | + | chr2_4:64035082-64035101 | None:intergenic | 20.0% |
| !!! | ATTTTTCAGGAAATAATCAT+TGG | - | chr2_4:64035237-64035256 | Msa0342100:intron | 20.0% |
| !!! | AGATATGAAATTTTTCCTAT+TGG | - | chr2_4:64035271-64035290 | Msa0342100:intron | 20.0% |
| ! | AATACAGAAACTAAAGGAAA+AGG | + | chr2_4:64032975-64032994 | None:intergenic | 25.0% |
| ! | TATTAATTGATGAACCTAAC+TGG | + | chr2_4:64033169-64033188 | None:intergenic | 25.0% |
| ! | AAAGGAAAAAAACTAATCTC+GGG | + | chr2_4:64033464-64033483 | None:intergenic | 25.0% |
| !!! | GCTACTGAAATTTTATTTCT+CGG | + | chr2_4:64033534-64033553 | None:intergenic | 25.0% |
| ! | TATTAAGGAGAATATTTCAC+TGG | - | chr2_4:64033574-64033593 | Msa0342100:intron | 25.0% |
| ! | ACAGTCACTAAATTTATACT+GGG | + | chr2_4:64034139-64034158 | None:intergenic | 25.0% |
| ! | TACAGTCACTAAATTTATAC+TGG | + | chr2_4:64034140-64034159 | None:intergenic | 25.0% |
| ! | ATTAAGGAATGACAACTAAA+TGG | - | chr2_4:64034184-64034203 | Msa0342100:intron | 25.0% |
| ! | GAGCTAAAGTAAATACAATT+GGG | + | chr2_4:64034273-64034292 | None:intergenic | 25.0% |
| ! | CAATTGAGTCAGAAAAAATT+AGG | + | chr2_4:64034307-64034326 | None:intergenic | 25.0% |
| ! | AAAGGTTTATATAGAGGATT+AGG | - | chr2_4:64034408-64034427 | Msa0342100:intron | 25.0% |
| ! | ATTCAATTAAAACTCATGTC+TGG | - | chr2_4:64034617-64034636 | Msa0342100:CDS | 25.0% |
| ! | GAAAAAAACTATCTTCCAAA+AGG | + | chr2_4:64034841-64034860 | None:intergenic | 25.0% |
| !! | TTTTGTCTGTATGAAGATAT+TGG | - | chr2_4:64034871-64034890 | Msa0342100:intron | 25.0% |
| ! | GAAACTCAATTTACATAGTT+TGG | + | chr2_4:64035083-64035102 | None:intergenic | 25.0% |
| !! | TGTAAATTGAGTTTCTTTTG+TGG | - | chr2_4:64035088-64035107 | Msa0342100:intron | 25.0% |
| !! | GTAAATTGAGTTTCTTTTGT+GGG | - | chr2_4:64035089-64035108 | Msa0342100:intron | 25.0% |
| ! | TTAGACAATTATCTTGGATT+AGG | - | chr2_4:64035315-64035334 | Msa0342100:intron | 25.0% |
| !! | TTCTTTTCCTAACATTGTTA+TGG | - | chr2_4:64035342-64035361 | Msa0342100:intron | 25.0% |
| !! | TCTTTTCCTAACATTGTTAT+GGG | - | chr2_4:64035343-64035362 | Msa0342100:intron | 25.0% |
| ! | AATTAACCCATAACAATGTT+AGG | + | chr2_4:64035352-64035371 | None:intergenic | 25.0% |
| !! | ATGGGTTAATTATTGTACAA+TGG | - | chr2_4:64035361-64035380 | Msa0342100:intron | 25.0% |
| ! | TGGGTTAATTATTGTACAAT+GGG | - | chr2_4:64035362-64035381 | Msa0342100:intron | 25.0% |
| ATCAGATATATGAGCTACTT+TGG | + | chr2_4:64033233-64033252 | None:intergenic | 30.0% | |
| TGAATAACCATTACATGATC+TGG | + | chr2_4:64033323-64033342 | None:intergenic | 30.0% | |
| AAGTGTAATTCAATCCTTTG+AGG | + | chr2_4:64033347-64033366 | None:intergenic | 30.0% | |
| CTTGCTTGAAATACATGAAT+TGG | - | chr2_4:64033364-64033383 | Msa0342100:intron | 30.0% | |
| !! | ATTTGGTTCAAGCTTTTGAT+AGG | + | chr2_4:64033438-64033457 | None:intergenic | 30.0% |
| AAACTAATCTCGGGTAAATT+TGG | + | chr2_4:64033455-64033474 | None:intergenic | 30.0% | |
| AATATACACAACAACCAACA+AGG | + | chr2_4:64033767-64033786 | None:intergenic | 30.0% | |
| TGTTAAAATGACAACTGCAA+TGG | - | chr2_4:64033805-64033824 | Msa0342100:CDS | 30.0% | |
| CAGTCACTAAATTTATACTG+GGG | + | chr2_4:64034138-64034157 | None:intergenic | 30.0% | |
| CGAGCTAAAGTAAATACAAT+TGG | + | chr2_4:64034274-64034293 | None:intergenic | 30.0% | |
| AGTCAGAAAAAATTAGGAGT+CGG | + | chr2_4:64034301-64034320 | None:intergenic | 30.0% | |
| TGTTAAAGAATTGATCAGTG+AGG | - | chr2_4:64034377-64034396 | Msa0342100:intron | 30.0% | |
| ! | AGTTCAAATAATCATCGACT+TGG | - | chr2_4:64034677-64034696 | Msa0342100:intron | 30.0% |
| AAATTATATGCATGCCAGAT+AGG | - | chr2_4:64034775-64034794 | Msa0342100:intron | 30.0% | |
| TGGCAGATTATCTGAATATA+AGG | + | chr2_4:64034811-64034830 | None:intergenic | 30.0% | |
| ATCTTCCAAAAGGTAAAGTA+TGG | + | chr2_4:64034831-64034850 | None:intergenic | 30.0% | |
| ATATTGGCAGTAAACAAATC+AGG | - | chr2_4:64034887-64034906 | Msa0342100:intron | 30.0% | |
| !!! | GATGAGTTGATTTTGGATAA+TGG | - | chr2_4:64035133-64035152 | Msa0342100:intron | 30.0% |
| !! | AAATCCAATGTTCAAGTTGT+AGG | + | chr2_4:64035182-64035201 | None:intergenic | 30.0% |
| !! | GCTATTCTAACTGATTTTTC+AGG | - | chr2_4:64035224-64035243 | Msa0342100:intron | 30.0% |
| TCAGGAAATAATCATTGGAT+TGG | - | chr2_4:64035242-64035261 | Msa0342100:intron | 30.0% | |
| GTTAATTATTGTACAATGGG+AGG | - | chr2_4:64035365-64035384 | Msa0342100:CDS | 30.0% | |
| ATTCCGTCTATTAAACTGCT+AGG | - | chr2_4:64033036-64033055 | Msa0342100:three_prime_UTR | 35.0% | |
| CAAATGGCATAATAACCTAC+CGG | + | chr2_4:64033062-64033081 | None:intergenic | 35.0% | |
| TCTGATTTCGTTGTATTCCA+AGG | - | chr2_4:64033247-64033266 | Msa0342100:CDS | 35.0% | |
| TAATGGTTATTCAGCCTCAA+AGG | - | chr2_4:64033330-64033349 | Msa0342100:intron | 35.0% | |
| ! | GAATATTTCACTGGTTGCTT+TGG | - | chr2_4:64033583-64033602 | Msa0342100:intron | 35.0% |
| AAAACAATCTTTGGCAGACT+AGG | + | chr2_4:64033649-64033668 | None:intergenic | 35.0% | |
| ! | TAGTCTGCCAAAGATTGTTT+TGG | - | chr2_4:64033648-64033667 | Msa0342100:intron | 35.0% |
| CATTGGATACAATCAAGACT+CGG | - | chr2_4:64033725-64033744 | Msa0342100:intron | 35.0% | |
| ACAGGTATTCATAACCTTGT+TGG | - | chr2_4:64033750-64033769 | Msa0342100:intron | 35.0% | |
| GAAGAAAACAGTTGTCTACA+GGG | + | chr2_4:64033890-64033909 | None:intergenic | 35.0% | |
| AGAAGAAAACAGTTGTCTAC+AGG | + | chr2_4:64033891-64033910 | None:intergenic | 35.0% | |
| AAAGAATTGATCAGTGAGGA+TGG | - | chr2_4:64034381-64034400 | Msa0342100:intron | 35.0% | |
| GGTTGGAAAGGTTTATATAG+AGG | - | chr2_4:64034402-64034421 | Msa0342100:intron | 35.0% | |
| ! | ATGGGGTACTTCAATGATAT+TGG | - | chr2_4:64034455-64034474 | Msa0342100:intron | 35.0% |
| TATCTCAGAACCACAAAACT+GGG | + | chr2_4:64034730-64034749 | None:intergenic | 35.0% | |
| ATATCTCAGAACCACAAAAC+TGG | + | chr2_4:64034731-64034750 | None:intergenic | 35.0% | |
| ! | ATCTGCCATACTTTACCTTT+TGG | - | chr2_4:64034823-64034842 | Msa0342100:intron | 35.0% |
| ! | TCAACTGATTAGCCAAGATA+TGG | - | chr2_4:64035055-64035074 | Msa0342100:intron | 35.0% |
| !!! | TTTGTGGGATGAGTTGATTT+TGG | - | chr2_4:64035104-64035123 | Msa0342100:intron | 35.0% |
| !!! | GATGAGTTGATTTTGGATGT+GGG | - | chr2_4:64035111-64035130 | Msa0342100:intron | 35.0% |
| CAACACACACATGCAACAAA+TGG | + | chr2_4:64033078-64033097 | None:intergenic | 40.0% | |
| !! | TCTGATTTGTGGTGCTACAT+AGG | + | chr2_4:64033102-64033121 | None:intergenic | 40.0% |
| AGCACCACAAATCAGATTGT+AGG | - | chr2_4:64033106-64033125 | Msa0342100:three_prime_UTR | 40.0% | |
| ! | CATGCCTACAATCTGATTTG+TGG | + | chr2_4:64033113-64033132 | None:intergenic | 40.0% |
| AATCAGATTGTAGGCATGTC+TGG | - | chr2_4:64033115-64033134 | Msa0342100:three_prime_UTR | 40.0% | |
| TTGTACTCCACTAACCAGTT+AGG | - | chr2_4:64033152-64033171 | Msa0342100:three_prime_UTR | 40.0% | |
| TGATGAACCTAACTGGTTAG+TGG | + | chr2_4:64033162-64033181 | None:intergenic | 40.0% | |
| TTCGTTGTATTCCAAGGACA+TGG | - | chr2_4:64033253-64033272 | Msa0342100:CDS | 40.0% | |
| AACCATTACATGATCTGGCA+AGG | + | chr2_4:64033318-64033337 | None:intergenic | 40.0% | |
| AACTTTCCTCAGTTCAACAC+AGG | + | chr2_4:64033392-64033411 | None:intergenic | 40.0% | |
| !! | AGGAGTACCTTTCTCAGATT+TGG | + | chr2_4:64033629-64033648 | None:intergenic | 40.0% |
| !!! | GCCAAAGATTGTTTTGGTTC+AGG | - | chr2_4:64033654-64033673 | Msa0342100:intron | 40.0% |
| GCCTGAACCAAAACAATCTT+TGG | + | chr2_4:64033658-64033677 | None:intergenic | 40.0% | |
| ATCGTGCATTACAACTCCAT+TGG | - | chr2_4:64033708-64033727 | Msa0342100:intron | 40.0% | |
| CGAGTCTTGATTGTATCCAA+TGG | + | chr2_4:64033727-64033746 | None:intergenic | 40.0% | |
| ! | TACAATCAAGACTCGGTTAC+AGG | - | chr2_4:64033732-64033751 | Msa0342100:intron | 40.0% |
| TATTATGAACGCAACCCACT+TGG | - | chr2_4:64033961-64033980 | Msa0342100:intron | 40.0% | |
| ATTATGAACGCAACCCACTT+GGG | - | chr2_4:64033962-64033981 | Msa0342100:intron | 40.0% | |
| ! | ATTCTCTCTGGTGCCAATTT+AGG | - | chr2_4:64034046-64034065 | Msa0342100:intron | 40.0% |
| AATTGATCAGTGAGGATGGT+TGG | - | chr2_4:64034385-64034404 | Msa0342100:intron | 40.0% | |
| ATTTGTCAGCATGTCAGCAT+GGG | - | chr2_4:64034437-64034456 | Msa0342100:intron | 40.0% | |
| ! | ATTACCACATCCCAGTTTTG+TGG | - | chr2_4:64034717-64034736 | Msa0342100:intron | 40.0% |
| AAGGTTGAATCACACCTATC+TGG | + | chr2_4:64034792-64034811 | None:intergenic | 40.0% | |
| ! | CTTCTTCATCTTTTGCGCAT+AGG | + | chr2_4:64035009-64035028 | None:intergenic | 40.0% |
| !! | GCAAAAGATGAAGAAGCGTT+TGG | - | chr2_4:64035013-64035032 | Msa0342100:intron | 40.0% |
| ! | CATAGTTTGGGACCATATCT+TGG | + | chr2_4:64035070-64035089 | None:intergenic | 40.0% |
| !!! | GGATGAGTTGATTTTGGATG+TGG | - | chr2_4:64035110-64035129 | Msa0342100:intron | 40.0% |
| !!! | GATGTGGGATGAGTTGATTT+TGG | - | chr2_4:64035126-64035145 | Msa0342100:intron | 40.0% |
| TGCTCCTACAACTTGAACAT+TGG | - | chr2_4:64035175-64035194 | Msa0342100:intron | 40.0% | |
| ATTCACCATCTAGCGCTGTT+TGG | - | chr2_4:64032857-64032876 | Msa0342100:three_prime_UTR | 45.0% | |
| GCTCAAGTCAACGCTTCTTA+TGG | - | chr2_4:64032893-64032912 | Msa0342100:three_prime_UTR | 45.0% | |
| CAAGTCAACGCTTCTTATGG+AGG | - | chr2_4:64032896-64032915 | Msa0342100:three_prime_UTR | 45.0% | |
| CTTCTTATGGAGGTGAGACA+TGG | - | chr2_4:64032906-64032925 | Msa0342100:three_prime_UTR | 45.0% | |
| CGGCCTAGCAGTTTAATAGA+CGG | + | chr2_4:64033042-64033061 | None:intergenic | 45.0% | |
| CGTCTATTAAACTGCTAGGC+CGG | - | chr2_4:64033040-64033059 | Msa0342100:three_prime_UTR | 45.0% | |
| TATTAAACTGCTAGGCCGGT+AGG | - | chr2_4:64033044-64033063 | Msa0342100:three_prime_UTR | 45.0% | |
| !! | AGGTAGTTTTGCCATGTCCT+TGG | + | chr2_4:64033267-64033286 | None:intergenic | 45.0% |
| AGCCTTGCCAGATCATGTAA+TGG | - | chr2_4:64033313-64033332 | Msa0342100:intron | 45.0% | |
| TTGGTACCTGTGTTGAACTG+AGG | - | chr2_4:64033383-64033402 | Msa0342100:intron | 45.0% | |
| GATGACGCCAAATCTGAGAA+AGG | - | chr2_4:64033619-64033638 | Msa0342100:intron | 45.0% | |
| !!! | ATTGTTTTGGTTCAGGCAGC+AGG | - | chr2_4:64033661-64033680 | Msa0342100:intron | 45.0% |
| !!! | TTGTTTTGGTTCAGGCAGCA+GGG | - | chr2_4:64033662-64033681 | Msa0342100:intron | 45.0% |
| ! | TCTCTGGTGCCAATTTAGGT+GGG | - | chr2_4:64034050-64034069 | Msa0342100:intron | 45.0% |
| GCTAAACAGCCCACCTAAAT+TGG | + | chr2_4:64034062-64034081 | None:intergenic | 45.0% | |
| ! | GTGATGGGACATGGAAAGAA+AGG | - | chr2_4:64034339-64034358 | Msa0342100:intron | 45.0% |
| ATCAGTGAGGATGGTTGGAA+AGG | - | chr2_4:64034390-64034409 | Msa0342100:intron | 45.0% | |
| GCTGACATGCTGACAAATCT+TGG | + | chr2_4:64034435-64034454 | None:intergenic | 45.0% | |
| GATTTGTCAGCATGTCAGCA+TGG | - | chr2_4:64034436-64034455 | Msa0342100:intron | 45.0% | |
| TTTGTCAGCATGTCAGCATG+GGG | - | chr2_4:64034438-64034457 | Msa0342100:intron | 45.0% | |
| AGAACCACAAAACTGGGATG+TGG | + | chr2_4:64034724-64034743 | None:intergenic | 45.0% | |
| !! | AAAAAAAAAAAAAATTGAAA+AGG | + | chr2_4:64033482-64033501 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTGTAA+TGG | - | chr2_4:64033493-64033512 | Msa0342100:intron | 5.0% |
| ACCATCTAGCGCTGTTTGGT+GGG | - | chr2_4:64032861-64032880 | Msa0342100:three_prime_UTR | 50.0% | |
| ! | GCTGTTTGGTGGGCAAGTTA+CGG | - | chr2_4:64032871-64032890 | Msa0342100:three_prime_UTR | 50.0% |
| !!! | TGTTTTGGTTCAGGCAGCAG+GGG | - | chr2_4:64033663-64033682 | Msa0342100:intron | 50.0% |
| GAGAGAGAGAGAGAGAGAGA+CGG | + | chr2_4:64033837-64033856 | None:intergenic | 50.0% | |
| !! | GTGGTATTGGCTTGGGTCTT+GGG | - | chr2_4:64033993-64034012 | Msa0342100:intron | 50.0% |
| GAATCGAACCTGAGACCTTG+CGG | + | chr2_4:64034030-64034049 | None:intergenic | 50.0% | |
| GTCTCAGGTTCGATTCTCTC+TGG | - | chr2_4:64034034-64034053 | Msa0342100:intron | 50.0% | |
| ! | CTCTCTGGTGCCAATTTAGG+TGG | - | chr2_4:64034049-64034068 | Msa0342100:intron | 50.0% |
| GACTCAATTGCTTGCACCAC+AGG | - | chr2_4:64034317-64034336 | Msa0342100:intron | 50.0% | |
| ATTGCTTGCACCACAGGTGA+TGG | - | chr2_4:64034323-64034342 | Msa0342100:intron | 50.0% | |
| TTGCTTGCACCACAGGTGAT+GGG | - | chr2_4:64034324-64034343 | Msa0342100:intron | 50.0% | |
| TTTCCATGTCCCATCACCTG+TGG | + | chr2_4:64034336-64034355 | None:intergenic | 50.0% | |
| ! | GAAGCGTTTGGTCAGCAATC+TGG | - | chr2_4:64035025-64035044 | Msa0342100:intron | 50.0% |
| CACCATCTAGCGCTGTTTGG+TGG | - | chr2_4:64032860-64032879 | Msa0342100:three_prime_UTR | 55.0% | |
| !!! | GTTTTGGTTCAGGCAGCAGG+GGG | - | chr2_4:64033664-64033683 | Msa0342100:intron | 55.0% |
| !! | GCAGCAGGGGGTATTATTGC+TGG | - | chr2_4:64033676-64033695 | Msa0342100:intron | 55.0% |
| TGAACGCAACCCACTTGGGT+TGG | - | chr2_4:64033966-64033985 | Msa0342100:intron | 55.0% | |
| !! | TTGGGTTGGCCTGGTGGTAT+TGG | - | chr2_4:64033980-64033999 | Msa0342100:intron | 55.0% |
| !! | TTGGCCTGGTGGTATTGGCT+TGG | - | chr2_4:64033985-64034004 | Msa0342100:intron | 55.0% |
| !! | TGGCCTGGTGGTATTGGCTT+GGG | - | chr2_4:64033986-64034005 | Msa0342100:intron | 55.0% |
| AGACCCAAGCCAATACCACC+AGG | + | chr2_4:64033992-64034011 | None:intergenic | 55.0% | |
| !! | GGTGGTATTGGCTTGGGTCT+TGG | - | chr2_4:64033992-64034011 | Msa0342100:intron | 55.0% |
| GCCCACCAAACAGCGCTAGA+TGG | + | chr2_4:64032865-64032884 | None:intergenic | 60.0% | |
| ACCACCAGGCCAACCCAAGT+GGG | + | chr2_4:64033978-64033997 | None:intergenic | 60.0% | |
| TACCACCAGGCCAACCCAAG+TGG | + | chr2_4:64033979-64033998 | None:intergenic | 60.0% | |
| TCGAACCTGAGACCTTGCGG+AGG | + | chr2_4:64034027-64034046 | None:intergenic | 60.0% | |
| !! | GCACCACAGGTGATGGGACA+TGG | - | chr2_4:64034330-64034349 | Msa0342100:intron | 60.0% |
| !! | GCAACCCACTTGGGTTGGCC+TGG | - | chr2_4:64033971-64033990 | Msa0342100:intron | 65.0% |
| !! | ACCCACTTGGGTTGGCCTGG+TGG | - | chr2_4:64033974-64033993 | Msa0342100:intron | 65.0% |
| ! | TGGGAGTGTGCTCCTCCGCA+AGG | - | chr2_4:64034012-64034031 | Msa0342100:intron | 65.0% |
| GTGCTCCTCCGCAAGGTCTC+AGG | - | chr2_4:64034019-64034038 | Msa0342100:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 64032850 | 64035431 | 64032850 | ID=Msa0342100;Name=Msa0342100 |
| chr2_4 | mRNA | 64032850 | 64035431 | 64032850 | ID=Msa0342100-mRNA-1;Parent=Msa0342100;Name=Msa0342100-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.33|0.25|1|1|1|4|365|143 |
| chr2_4 | exon | 64032850 | 64033279 | 64032850 | ID=Msa0342100-mRNA-1:exon:20584;Parent=Msa0342100-mRNA-1 |
| chr2_4 | exon | 64033789 | 64033942 | 64033789 | ID=Msa0342100-mRNA-1:exon:20583;Parent=Msa0342100-mRNA-1 |
| chr2_4 | exon | 64034528 | 64034672 | 64034528 | ID=Msa0342100-mRNA-1:exon:20582;Parent=Msa0342100-mRNA-1 |
| chr2_4 | exon | 64035364 | 64035431 | 64035364 | ID=Msa0342100-mRNA-1:exon:20581;Parent=Msa0342100-mRNA-1 |
| chr2_4 | CDS | 64035364 | 64035431 | 64035364 | ID=Msa0342100-mRNA-1:cds;Parent=Msa0342100-mRNA-1 |
| chr2_4 | CDS | 64034528 | 64034672 | 64034528 | ID=Msa0342100-mRNA-1:cds;Parent=Msa0342100-mRNA-1 |
| chr2_4 | CDS | 64033789 | 64033942 | 64033789 | ID=Msa0342100-mRNA-1:cds;Parent=Msa0342100-mRNA-1 |
| chr2_4 | CDS | 64033215 | 64033279 | 64033215 | ID=Msa0342100-mRNA-1:cds;Parent=Msa0342100-mRNA-1 |
| chr2_4 | three_prime_UTR | 64032850 | 64033214 | 64032850 | ID=Msa0342100-mRNA-1:three_prime_utr;Parent=Msa0342100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
