Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1341070 | XP_003629385.1 | 90.306 | 196 | 18 | 1 | 1 | 196 | 1 | 195 | 6.39e-103 | 305 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1341070 | sp|P53163|MNP1_YEAST | 39.456 | 147 | 88 | 1 | 50 | 196 | 49 | 194 | 6.08e-19 | 83.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1341070 | G7LD30 | 90.306 | 196 | 18 | 1 | 1 | 196 | 1 | 195 | 3.05e-103 | 305 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1341070 | -0.816060 | 6.717670e-52 | -8.615850e-47 |
| Msa0003720 | Msa1341070 | 0.837265 | 5.757467e-57 | -8.615850e-47 |
| Msa0004950 | Msa1341070 | 0.816509 | 5.331233e-52 | -8.615850e-47 |
| Msa0006290 | Msa1341070 | 0.814341 | 1.618963e-51 | -8.615850e-47 |
| Msa0006550 | Msa1341070 | 0.800191 | 1.618159e-48 | -8.615850e-47 |
| Msa0011960 | Msa1341070 | 0.800762 | 1.238121e-48 | -8.615850e-47 |
| Msa0016670 | Msa1341070 | 0.811258 | 7.658196e-51 | -8.615850e-47 |
| Msa0018620 | Msa1341070 | 0.801175 | 1.019422e-48 | -8.615850e-47 |
| Msa0025730 | Msa1341070 | 0.820146 | 8.001972e-53 | -8.615850e-47 |
| Msa0027260 | Msa1341070 | 0.849490 | 3.127731e-60 | -8.615850e-47 |
| Msa0027580 | Msa1341070 | 0.815118 | 1.088948e-51 | -8.615850e-47 |
| Msa0029260 | Msa1341070 | 0.824137 | 9.499637e-54 | -8.615850e-47 |
| Msa0030380 | Msa1341070 | 0.817724 | 2.843411e-52 | -8.615850e-47 |
| Msa0032260 | Msa1341070 | 0.829882 | 4.013667e-55 | -8.615850e-47 |
| Msa0032370 | Msa1341070 | 0.811535 | 6.669536e-51 | -8.615850e-47 |
| Msa0032580 | Msa1341070 | 0.807805 | 4.224002e-50 | -8.615850e-47 |
| Msa0040690 | Msa1341070 | 0.803238 | 3.835660e-49 | -8.615850e-47 |
| Msa0042280 | Msa1341070 | 0.801754 | 7.756221e-49 | -8.615850e-47 |
| Msa0043660 | Msa1341070 | 0.801469 | 8.874608e-49 | -8.615850e-47 |
| Msa0047160 | Msa1341070 | 0.822063 | 2.893539e-53 | -8.615850e-47 |
| Msa0048030 | Msa1341070 | 0.805923 | 1.055821e-49 | -8.615850e-47 |
| Msa0048180 | Msa1341070 | 0.830025 | 3.704520e-55 | -8.615850e-47 |
| Msa0052610 | Msa1341070 | 0.819443 | 1.158356e-52 | -8.615850e-47 |
| Msa0054930 | Msa1341070 | 0.823310 | 1.484121e-53 | -8.615850e-47 |
| Msa0057710 | Msa1341070 | 0.844982 | 5.394226e-59 | -8.615850e-47 |
| Msa0067870 | Msa1341070 | 0.801132 | 1.040209e-48 | -8.615850e-47 |
| Msa0068760 | Msa1341070 | 0.808065 | 3.719149e-50 | -8.615850e-47 |
| Msa0073670 | Msa1341070 | 0.816527 | 5.282514e-52 | -8.615850e-47 |
| Msa0074320 | Msa1341070 | 0.815176 | 1.057033e-51 | -8.615850e-47 |
| Msa0075340 | Msa1341070 | 0.815626 | 8.397090e-52 | -8.615850e-47 |
| Msa0076000 | Msa1341070 | 0.816078 | 6.656153e-52 | -8.615850e-47 |
| Msa0076040 | Msa1341070 | 0.805536 | 1.273290e-49 | -8.615850e-47 |
| Msa0077200 | Msa1341070 | 0.819032 | 1.436624e-52 | -8.615850e-47 |
| Msa0077540 | Msa1341070 | 0.813852 | 2.074891e-51 | -8.615850e-47 |
| Msa0090590 | Msa1341070 | 0.817158 | 3.812504e-52 | -8.615850e-47 |
| Msa0094470 | Msa1341070 | 0.824132 | 9.525546e-54 | -8.615850e-47 |
| Msa0094950 | Msa1341070 | 0.842107 | 3.163897e-58 | -8.615850e-47 |
| Msa0095010 | Msa1341070 | 0.812725 | 3.668554e-51 | -8.615850e-47 |
| Msa0095380 | Msa1341070 | 0.810171 | 1.316204e-50 | -8.615850e-47 |
| Msa0100300 | Msa1341070 | 0.818807 | 1.616715e-52 | -8.615850e-47 |
| Msa0100740 | Msa1341070 | 0.801255 | 9.814542e-49 | -8.615850e-47 |
| Msa0100800 | Msa1341070 | 0.803248 | 3.817246e-49 | -8.615850e-47 |
| Msa0103180 | Msa1341070 | 0.814787 | 1.289582e-51 | -8.615850e-47 |
| Msa0105620 | Msa1341070 | 0.813951 | 1.973820e-51 | -8.615850e-47 |
| Msa0118710 | Msa1341070 | 0.807182 | 5.726761e-50 | -8.615850e-47 |
| Msa0603320 | Msa1341070 | 0.806890 | 6.602861e-50 | -8.615850e-47 |
| Msa0605000 | Msa1341070 | 0.801375 | 9.276286e-49 | -8.615850e-47 |
| Msa0610390 | Msa1341070 | 0.842365 | 2.703265e-58 | -8.615850e-47 |
| Msa0615440 | Msa1341070 | 0.820959 | 5.205337e-53 | -8.615850e-47 |
| Msa0618010 | Msa1341070 | 0.810142 | 1.335421e-50 | -8.615850e-47 |
| Msa0619070 | Msa1341070 | 0.816309 | 5.910793e-52 | -8.615850e-47 |
| Msa0620990 | Msa1341070 | 0.813618 | 2.336472e-51 | -8.615850e-47 |
| Msa0621950 | Msa1341070 | 0.833317 | 5.716044e-56 | -8.615850e-47 |
| Msa0639120 | Msa1341070 | 0.818507 | 1.890595e-52 | -8.615850e-47 |
| Msa0650920 | Msa1341070 | 0.845803 | 3.233572e-59 | -8.615850e-47 |
| Msa0654870 | Msa1341070 | 0.826621 | 2.453735e-54 | -8.615850e-47 |
| Msa0663900 | Msa1341070 | 0.819492 | 1.128926e-52 | -8.615850e-47 |
| Msa0664960 | Msa1341070 | 0.811910 | 5.526598e-51 | -8.615850e-47 |
| Msa0666230 | Msa1341070 | 0.816099 | 6.584128e-52 | -8.615850e-47 |
| Msa0669850 | Msa1341070 | 0.823622 | 1.254241e-53 | -8.615850e-47 |
| Msa0670270 | Msa1341070 | 0.805576 | 1.248865e-49 | -8.615850e-47 |
| Msa0677290 | Msa1341070 | 0.890422 | 9.993699e-74 | -8.615850e-47 |
| Msa0678860 | Msa1341070 | 0.800682 | 1.285150e-48 | -8.615850e-47 |
| Msa0680240 | Msa1341070 | 0.841963 | 3.453497e-58 | -8.615850e-47 |
| Msa0687630 | Msa1341070 | 0.835973 | 1.228066e-56 | -8.615850e-47 |
| Msa0689260 | Msa1341070 | 0.802050 | 6.742952e-49 | -8.615850e-47 |
| Msa0692840 | Msa1341070 | 0.816370 | 5.727442e-52 | -8.615850e-47 |
| Msa0692940 | Msa1341070 | 0.837024 | 6.634507e-57 | -8.615850e-47 |
| Msa0698060 | Msa1341070 | 0.814228 | 1.714697e-51 | -8.615850e-47 |
| Msa0698490 | Msa1341070 | 0.820744 | 5.834287e-53 | -8.615850e-47 |
| Msa0698660 | Msa1341070 | 0.823779 | 1.152400e-53 | -8.615850e-47 |
| Msa0701280 | Msa1341070 | 0.800494 | 1.403650e-48 | -8.615850e-47 |
| Msa0703230 | Msa1341070 | 0.824517 | 7.734811e-54 | -8.615850e-47 |
| Msa0707390 | Msa1341070 | 0.804919 | 1.714356e-49 | -8.615850e-47 |
| Msa0709500 | Msa1341070 | 0.822645 | 2.120802e-53 | -8.615850e-47 |
| Msa0711490 | Msa1341070 | 0.822346 | 2.488204e-53 | -8.615850e-47 |
| Msa0712310 | Msa1341070 | 0.828802 | 7.340613e-55 | -8.615850e-47 |
| Msa0715010 | Msa1341070 | -0.814559 | 1.448665e-51 | -8.615850e-47 |
| Msa0718740 | Msa1341070 | 0.837958 | 3.821606e-57 | -8.615850e-47 |
| Msa0719420 | Msa1341070 | 0.831798 | 1.360845e-55 | -8.615850e-47 |
| Msa0734960 | Msa1341070 | 0.819798 | 9.613734e-53 | -8.615850e-47 |
| Msa0738100 | Msa1341070 | 0.810080 | 1.376789e-50 | -8.615850e-47 |
| Msa0747700 | Msa1341070 | 0.808704 | 2.717483e-50 | -8.615850e-47 |
| Msa0750880 | Msa1341070 | 0.829852 | 4.081205e-55 | -8.615850e-47 |
| Msa0750920 | Msa1341070 | 0.836934 | 6.992750e-57 | -8.615850e-47 |
| Msa0755340 | Msa1341070 | 0.832045 | 1.182309e-55 | -8.615850e-47 |
| Msa0772480 | Msa1341070 | 0.801651 | 8.142504e-49 | -8.615850e-47 |
| Msa0785130 | Msa1341070 | 0.816770 | 4.658411e-52 | -8.615850e-47 |
| Msa0786270 | Msa1341070 | 0.809867 | 1.530012e-50 | -8.615850e-47 |
| Msa0789680 | Msa1341070 | 0.831887 | 1.293419e-55 | -8.615850e-47 |
| Msa0790400 | Msa1341070 | 0.826491 | 2.635133e-54 | -8.615850e-47 |
| Msa0790850 | Msa1341070 | 0.826749 | 2.286587e-54 | -8.615850e-47 |
| Msa0795010 | Msa1341070 | 0.800787 | 1.223255e-48 | -8.615850e-47 |
| Msa0795030 | Msa1341070 | 0.816339 | 5.820814e-52 | -8.615850e-47 |
| Msa0797120 | Msa1341070 | 0.812975 | 3.233667e-51 | -8.615850e-47 |
| Msa0798000 | Msa1341070 | -0.831444 | 1.663250e-55 | -8.615850e-47 |
| Msa0798440 | Msa1341070 | 0.807933 | 3.967475e-50 | -8.615850e-47 |
| Msa0802410 | Msa1341070 | 0.846662 | 1.886490e-59 | -8.615850e-47 |
| Msa0813720 | Msa1341070 | 0.803948 | 2.731630e-49 | -8.615850e-47 |
| Msa0814250 | Msa1341070 | 0.808790 | 2.605126e-50 | -8.615850e-47 |
| Msa0823090 | Msa1341070 | 0.825444 | 4.671397e-54 | -8.615850e-47 |
| Msa0824640 | Msa1341070 | 0.808924 | 2.438359e-50 | -8.615850e-47 |
| Msa0826500 | Msa1341070 | 0.803021 | 4.252246e-49 | -8.615850e-47 |
| Msa0830540 | Msa1341070 | 0.805574 | 1.250113e-49 | -8.615850e-47 |
| Msa0830990 | Msa1341070 | 0.833845 | 4.220077e-56 | -8.615850e-47 |
| Msa0831530 | Msa1341070 | 0.813715 | 2.224310e-51 | -8.615850e-47 |
| Msa0831580 | Msa1341070 | 0.807029 | 6.170928e-50 | -8.615850e-47 |
| Msa0121820 | Msa1341070 | 0.824466 | 7.951283e-54 | -8.615850e-47 |
| Msa0124690 | Msa1341070 | 0.813201 | 2.885442e-51 | -8.615850e-47 |
| Msa0124990 | Msa1341070 | 0.822753 | 2.001302e-53 | -8.615850e-47 |
| Msa0127040 | Msa1341070 | 0.839559 | 1.473846e-57 | -8.615850e-47 |
| Msa0127310 | Msa1341070 | 0.840813 | 6.934409e-58 | -8.615850e-47 |
| Msa0128860 | Msa1341070 | 0.850204 | 1.975608e-60 | -8.615850e-47 |
| Msa0130240 | Msa1341070 | 0.812054 | 5.141908e-51 | -8.615850e-47 |
| Msa0137040 | Msa1341070 | 0.820388 | 7.041550e-53 | -8.615850e-47 |
| Msa0137610 | Msa1341070 | -0.808699 | 2.724669e-50 | -8.615850e-47 |
| Msa0140300 | Msa1341070 | 0.838827 | 2.281330e-57 | -8.615850e-47 |
| Msa0141340 | Msa1341070 | 0.804098 | 2.542874e-49 | -8.615850e-47 |
| Msa0141440 | Msa1341070 | 0.808960 | 2.395998e-50 | -8.615850e-47 |
| Msa0144540 | Msa1341070 | 0.827267 | 1.719009e-54 | -8.615850e-47 |
| Msa0146280 | Msa1341070 | 0.843298 | 1.527426e-58 | -8.615850e-47 |
| Msa0167480 | Msa1341070 | 0.855171 | 7.543598e-62 | -8.615850e-47 |
| Msa0168640 | Msa1341070 | -0.809767 | 1.608305e-50 | -8.615850e-47 |
| Msa0169300 | Msa1341070 | 0.819638 | 1.045449e-52 | -8.615850e-47 |
| Msa0172350 | Msa1341070 | 0.809508 | 1.827458e-50 | -8.615850e-47 |
| Msa0172970 | Msa1341070 | 0.805110 | 1.563819e-49 | -8.615850e-47 |
| Msa0173740 | Msa1341070 | 0.825023 | 5.875465e-54 | -8.615850e-47 |
| Msa0173820 | Msa1341070 | 0.815449 | 9.194694e-52 | -8.615850e-47 |
| Msa0174730 | Msa1341070 | 0.848059 | 7.800008e-60 | -8.615850e-47 |
| Msa0181610 | Msa1341070 | 0.804276 | 2.334327e-49 | -8.615850e-47 |
| Msa0183830 | Msa1341070 | 0.830140 | 3.471787e-55 | -8.615850e-47 |
| Msa0185590 | Msa1341070 | 0.812851 | 3.443316e-51 | -8.615850e-47 |
| Msa0186890 | Msa1341070 | 0.828818 | 7.276089e-55 | -8.615850e-47 |
| Msa0187120 | Msa1341070 | 0.814505 | 1.488825e-51 | -8.615850e-47 |
| Msa0187690 | Msa1341070 | 0.803796 | 2.938457e-49 | -8.615850e-47 |
| Msa0187930 | Msa1341070 | 0.845532 | 3.829794e-59 | -8.615850e-47 |
| Msa0188350 | Msa1341070 | 0.801359 | 9.344296e-49 | -8.615850e-47 |
| Msa0188690 | Msa1341070 | 0.810160 | 1.323637e-50 | -8.615850e-47 |
| Msa0189300 | Msa1341070 | 0.809628 | 1.722799e-50 | -8.615850e-47 |
| Msa0194540 | Msa1341070 | 0.849014 | 4.242764e-60 | -8.615850e-47 |
| Msa0197780 | Msa1341070 | 0.819096 | 1.389413e-52 | -8.615850e-47 |
| Msa0199690 | Msa1341070 | 0.860313 | 2.254033e-63 | -8.615850e-47 |
| Msa0199880 | Msa1341070 | 0.806347 | 8.598107e-50 | -8.615850e-47 |
| Msa0220720 | Msa1341070 | 0.809589 | 1.756302e-50 | -8.615850e-47 |
| Msa0225180 | Msa1341070 | 0.824580 | 7.472372e-54 | -8.615850e-47 |
| Msa0226470 | Msa1341070 | 0.818166 | 2.258747e-52 | -8.615850e-47 |
| Msa0227400 | Msa1341070 | 0.831434 | 1.673246e-55 | -8.615850e-47 |
| Msa0228480 | Msa1341070 | 0.812960 | 3.259718e-51 | -8.615850e-47 |
| Msa0231100 | Msa1341070 | 0.824854 | 6.442366e-54 | -8.615850e-47 |
| Msa0231660 | Msa1341070 | 0.818419 | 1.979374e-52 | -8.615850e-47 |
| Msa0231880 | Msa1341070 | 0.820466 | 6.759482e-53 | -8.615850e-47 |
| Msa0236980 | Msa1341070 | 0.800872 | 1.175498e-48 | -8.615850e-47 |
| Msa1226620 | Msa1341070 | 0.822917 | 1.832822e-53 | -8.615850e-47 |
| Msa1227690 | Msa1341070 | 0.824297 | 8.712211e-54 | -8.615850e-47 |
| Msa1228890 | Msa1341070 | 0.801811 | 7.551197e-49 | -8.615850e-47 |
| Msa1228970 | Msa1341070 | 0.800792 | 1.220680e-48 | -8.615850e-47 |
| Msa1251160 | Msa1341070 | 0.807661 | 4.533698e-50 | -8.615850e-47 |
| Msa1252190 | Msa1341070 | 0.824832 | 6.518471e-54 | -8.615850e-47 |
| Msa1253800 | Msa1341070 | 0.807531 | 4.829974e-50 | -8.615850e-47 |
| Msa1254610 | Msa1341070 | 0.846541 | 2.036139e-59 | -8.615850e-47 |
| Msa1254710 | Msa1341070 | 0.848010 | 8.049006e-60 | -8.615850e-47 |
| Msa1255040 | Msa1341070 | -0.805162 | 1.524956e-49 | -8.615850e-47 |
| Msa1257510 | Msa1341070 | 0.828392 | 9.220384e-55 | -8.615850e-47 |
| Msa1265630 | Msa1341070 | 0.820608 | 6.270737e-53 | -8.615850e-47 |
| Msa1269580 | Msa1341070 | -0.802890 | 4.526096e-49 | -8.615850e-47 |
| Msa1270620 | Msa1341070 | 0.807699 | 4.450179e-50 | -8.615850e-47 |
| Msa1274280 | Msa1341070 | 0.825361 | 4.887914e-54 | -8.615850e-47 |
| Msa1286970 | Msa1341070 | 0.803288 | 3.743885e-49 | -8.615850e-47 |
| Msa1292830 | Msa1341070 | 0.830957 | 2.191274e-55 | -8.615850e-47 |
| Msa1294840 | Msa1341070 | 0.825777 | 3.895801e-54 | -8.615850e-47 |
| Msa1294960 | Msa1341070 | 0.800451 | 1.432691e-48 | -8.615850e-47 |
| Msa1295110 | Msa1341070 | 0.817878 | 2.624620e-52 | -8.615850e-47 |
| Msa1306990 | Msa1341070 | 0.803488 | 3.403468e-49 | -8.615850e-47 |
| Msa1307950 | Msa1341070 | 0.807677 | 4.497029e-50 | -8.615850e-47 |
| Msa1327490 | Msa1341070 | 0.804362 | 2.240747e-49 | -8.615850e-47 |
| Msa1331710 | Msa1341070 | 0.809861 | 1.535063e-50 | -8.615850e-47 |
| Msa1333110 | Msa1341070 | 0.814312 | 1.642691e-51 | -8.615850e-47 |
| Msa1335940 | Msa1341070 | 0.839969 | 1.153017e-57 | -8.615850e-47 |
| Msa1341070 | Msa1349570 | 0.820593 | 6.319931e-53 | -8.615850e-47 |
| Msa1341070 | Msa1353060 | 0.833535 | 5.043764e-56 | -8.615850e-47 |
| Msa1341070 | Msa1355700 | 0.822710 | 2.047603e-53 | -8.615850e-47 |
| Msa1341070 | Msa1358250 | 0.803294 | 3.733397e-49 | -8.615850e-47 |
| Msa1341070 | Msa1362510 | 0.831627 | 1.499384e-55 | -8.615850e-47 |
| Msa1341070 | Msa1363330 | 0.877993 | 4.023568e-69 | -8.615850e-47 |
| Msa1341070 | Msa1365150 | 0.835184 | 1.945370e-56 | -8.615850e-47 |
| Msa1341070 | Msa1367880 | 0.838056 | 3.607142e-57 | -8.615850e-47 |
| Msa1341070 | Msa1374060 | 0.838485 | 2.796538e-57 | -8.615850e-47 |
| Msa1341070 | Msa1376650 | 0.800959 | 1.128219e-48 | -8.615850e-47 |
| Msa1341070 | Msa1379760 | 0.851515 | 8.440353e-61 | -8.615850e-47 |
| Msa1341070 | Msa1382310 | 0.815968 | 7.042806e-52 | -8.615850e-47 |
| Msa1341070 | Msa1382560 | 0.835388 | 1.728030e-56 | -8.615850e-47 |
| Msa1341070 | Msa1382780 | 0.809835 | 1.555035e-50 | -8.615850e-47 |
| Msa1341070 | Msa1386600 | 0.877271 | 7.184069e-69 | -8.615850e-47 |
| Msa1341070 | Msa1387190 | 0.807981 | 3.875723e-50 | -8.615850e-47 |
| Msa1341070 | Msa1390310 | 0.803466 | 3.440495e-49 | -8.615850e-47 |
| Msa1341070 | Msa1394290 | 0.822276 | 2.583281e-53 | -8.615850e-47 |
| Msa1341070 | Msa1397940 | 0.820030 | 8.508260e-53 | -8.615850e-47 |
| Msa1341070 | Msa1404190 | 0.832123 | 1.131050e-55 | -8.615850e-47 |
| Msa1341070 | Msa1406040 | 0.892038 | 2.293982e-74 | -8.615850e-47 |
| Msa1341070 | Msa1432700 | 0.846952 | 1.571381e-59 | -8.615850e-47 |
| Msa1341070 | Msa1438640 | 0.812003 | 5.274096e-51 | -8.615850e-47 |
| Msa1341070 | Msa1439960 | 0.804855 | 1.768171e-49 | -8.615850e-47 |
| Msa1341070 | Msa1442850 | 0.813153 | 2.956533e-51 | -8.615850e-47 |
| Msa1341070 | Msa1443300 | 0.827779 | 1.295417e-54 | -8.615850e-47 |
| Msa1341070 | Msa1444310 | 0.807171 | 5.757361e-50 | -8.615850e-47 |
| Msa1341070 | Msa1447240 | 0.805580 | 1.246156e-49 | -8.615850e-47 |
| Msa1341070 | Msa1448510 | 0.801447 | 8.967442e-49 | -8.615850e-47 |
| Msa1341070 | Msa1448690 | 0.838902 | 2.181557e-57 | -8.615850e-47 |
| Msa1341070 | Msa1450280 | 0.835938 | 1.254000e-56 | -8.615850e-47 |
| Msa1341070 | Msa1453620 | 0.814579 | 1.433865e-51 | -8.615850e-47 |
| Msa1341070 | Msa1457920 | 0.815140 | 1.076682e-51 | -8.615850e-47 |
| Msa1341070 | Msa1458810 | 0.801049 | 1.081729e-48 | -8.615850e-47 |
| Msa1341070 | Msa1461490 | 0.815227 | 1.029952e-51 | -8.615850e-47 |
| Msa0366890 | Msa1341070 | 0.801002 | 1.105715e-48 | -8.615850e-47 |
| Msa0369220 | Msa1341070 | 0.809615 | 1.733222e-50 | -8.615850e-47 |
| Msa0370160 | Msa1341070 | -0.817171 | 3.786996e-52 | -8.615850e-47 |
| Msa0376040 | Msa1341070 | 0.812653 | 3.804109e-51 | -8.615850e-47 |
| Msa0376690 | Msa1341070 | 0.801580 | 8.419869e-49 | -8.615850e-47 |
| Msa0378080 | Msa1341070 | 0.803110 | 4.075323e-49 | -8.615850e-47 |
| Msa0378980 | Msa1341070 | 0.805235 | 1.472167e-49 | -8.615850e-47 |
| Msa0379080 | Msa1341070 | 0.811200 | 7.885740e-51 | -8.615850e-47 |
| Msa0385580 | Msa1341070 | 0.813415 | 2.589180e-51 | -8.615850e-47 |
| Msa0387950 | Msa1341070 | 0.809469 | 1.863016e-50 | -8.615850e-47 |
| Msa0394400 | Msa1341070 | 0.800114 | 1.677840e-48 | -8.615850e-47 |
| Msa0398950 | Msa1341070 | 0.820770 | 5.753183e-53 | -8.615850e-47 |
| Msa0402330 | Msa1341070 | 0.806884 | 6.623274e-50 | -8.615850e-47 |
| Msa0413450 | Msa1341070 | 0.810014 | 1.422866e-50 | -8.615850e-47 |
| Msa0414800 | Msa1341070 | 0.803957 | 2.720613e-49 | -8.615850e-47 |
| Msa0415810 | Msa1341070 | 0.811040 | 8.542423e-51 | -8.615850e-47 |
| Msa0416400 | Msa1341070 | 0.804673 | 1.929295e-49 | -8.615850e-47 |
| Msa0417610 | Msa1341070 | -0.801239 | 9.890559e-49 | -8.615850e-47 |
| Msa0419820 | Msa1341070 | 0.803016 | 4.263606e-49 | -8.615850e-47 |
| Msa0425940 | Msa1341070 | 0.824757 | 6.790699e-54 | -8.615850e-47 |
| Msa0426160 | Msa1341070 | 0.803977 | 2.694498e-49 | -8.615850e-47 |
| Msa0436200 | Msa1341070 | 0.847842 | 8.950086e-60 | -8.615850e-47 |
| Msa0437690 | Msa1341070 | -0.816053 | 6.743825e-52 | -8.615850e-47 |
| Msa0439230 | Msa1341070 | 0.801741 | 7.803444e-49 | -8.615850e-47 |
| Msa0443390 | Msa1341070 | 0.818603 | 1.798426e-52 | -8.615850e-47 |
| Msa0453230 | Msa1341070 | 0.807648 | 4.562410e-50 | -8.615850e-47 |
| Msa0458060 | Msa1341070 | 0.834766 | 2.479629e-56 | -8.615850e-47 |
| Msa0460930 | Msa1341070 | 0.806989 | 6.293527e-50 | -8.615850e-47 |
| Msa0463500 | Msa1341070 | 0.802683 | 4.994595e-49 | -8.615850e-47 |
| Msa0468160 | Msa1341070 | 0.807056 | 6.089259e-50 | -8.615850e-47 |
| Msa0469910 | Msa1341070 | -0.822061 | 2.896773e-53 | -8.615850e-47 |
| Msa0471590 | Msa1341070 | 0.817400 | 3.362937e-52 | -8.615850e-47 |
| Msa0980940 | Msa1341070 | 0.810740 | 9.917599e-51 | -8.615850e-47 |
| Msa0989540 | Msa1341070 | 0.810856 | 9.360991e-51 | -8.615850e-47 |
| Msa1006840 | Msa1341070 | 0.827357 | 1.635611e-54 | -8.615850e-47 |
| Msa1008060 | Msa1341070 | -0.810117 | 1.352066e-50 | -8.615850e-47 |
| Msa1013400 | Msa1341070 | 0.829985 | 3.789104e-55 | -8.615850e-47 |
| Msa1019240 | Msa1341070 | 0.871331 | 7.412089e-67 | -8.615850e-47 |
| Msa1019260 | Msa1341070 | 0.869154 | 3.830148e-66 | -8.615850e-47 |
| Msa1027250 | Msa1341070 | 0.810278 | 1.248079e-50 | -8.615850e-47 |
| Msa1030930 | Msa1341070 | 0.817845 | 2.669220e-52 | -8.615850e-47 |
| Msa1044340 | Msa1341070 | 0.805339 | 1.400058e-49 | -8.615850e-47 |
| Msa1050200 | Msa1341070 | 0.820047 | 8.428732e-53 | -8.615850e-47 |
| Msa1055010 | Msa1341070 | 0.814553 | 1.453242e-51 | -8.615850e-47 |
| Msa1055410 | Msa1341070 | 0.800906 | 1.156610e-48 | -8.615850e-47 |
| Msa1066490 | Msa1341070 | 0.820168 | 7.911307e-53 | -8.615850e-47 |
| Msa1069660 | Msa1341070 | -0.800462 | 1.425261e-48 | -8.615850e-47 |
| Msa1081150 | Msa1341070 | 0.826086 | 3.289263e-54 | -8.615850e-47 |
| Msa1082700 | Msa1341070 | 0.805545 | 1.267729e-49 | -8.615850e-47 |
| Msa1084470 | Msa1341070 | 0.833120 | 6.399126e-56 | -8.615850e-47 |
| Msa1093530 | Msa1341070 | 0.837204 | 5.966729e-57 | -8.615850e-47 |
| Msa1094420 | Msa1341070 | 0.803483 | 3.411363e-49 | -8.615850e-47 |
| Msa1100720 | Msa1341070 | 0.812115 | 4.986727e-51 | -8.615850e-47 |
| Msa1104140 | Msa1341070 | 0.855513 | 6.000720e-62 | -8.615850e-47 |
| Msa1104210 | Msa1341070 | 0.868399 | 6.719601e-66 | -8.615850e-47 |
| Msa1106700 | Msa1341070 | 0.824686 | 7.055660e-54 | -8.615850e-47 |
| Msa0239450 | Msa1341070 | 0.806548 | 7.799114e-50 | -8.615850e-47 |
| Msa0241640 | Msa1341070 | 0.804204 | 2.416491e-49 | -8.615850e-47 |
| Msa0241800 | Msa1341070 | 0.800872 | 1.175255e-48 | -8.615850e-47 |
| Msa0242230 | Msa1341070 | 0.832194 | 1.086302e-55 | -8.615850e-47 |
| Msa0242680 | Msa1341070 | 0.811929 | 5.474481e-51 | -8.615850e-47 |
| Msa0244780 | Msa1341070 | 0.845480 | 3.957144e-59 | -8.615850e-47 |
| Msa0260240 | Msa1341070 | 0.842530 | 2.444388e-58 | -8.615850e-47 |
| Msa0260280 | Msa1341070 | 0.840259 | 9.682455e-58 | -8.615850e-47 |
| Msa0262050 | Msa1341070 | 0.821426 | 4.063314e-53 | -8.615850e-47 |
| Msa0262310 | Msa1341070 | 0.825509 | 4.510217e-54 | -8.615850e-47 |
| Msa0262480 | Msa1341070 | 0.867927 | 9.536975e-66 | -8.615850e-47 |
| Msa0264570 | Msa1341070 | 0.829919 | 3.931190e-55 | -8.615850e-47 |
| Msa0267760 | Msa1341070 | 0.800613 | 1.327667e-48 | -8.615850e-47 |
| Msa0268130 | Msa1341070 | 0.842698 | 2.206030e-58 | -8.615850e-47 |
| Msa0271530 | Msa1341070 | 0.809616 | 1.732726e-50 | -8.615850e-47 |
| Msa0279790 | Msa1341070 | 0.817089 | 3.951363e-52 | -8.615850e-47 |
| Msa0280430 | Msa1341070 | 0.836981 | 6.803737e-57 | -8.615850e-47 |
| Msa0291520 | Msa1341070 | 0.831438 | 1.669197e-55 | -8.615850e-47 |
| Msa0298990 | Msa1341070 | 0.840231 | 9.847677e-58 | -8.615850e-47 |
| Msa0299870 | Msa1341070 | 0.802343 | 5.869546e-49 | -8.615850e-47 |
| Msa0300120 | Msa1341070 | 0.833504 | 5.135850e-56 | -8.615850e-47 |
| Msa0300350 | Msa1341070 | 0.858440 | 8.229287e-63 | -8.615850e-47 |
| Msa0304260 | Msa1341070 | 0.830176 | 3.402948e-55 | -8.615850e-47 |
| Msa0304300 | Msa1341070 | 0.820768 | 5.760853e-53 | -8.615850e-47 |
| Msa0304590 | Msa1341070 | 0.800338 | 1.510193e-48 | -8.615850e-47 |
| Msa0304660 | Msa1341070 | 0.803947 | 2.733764e-49 | -8.615850e-47 |
| Msa0307850 | Msa1341070 | 0.845268 | 4.514591e-59 | -8.615850e-47 |
| Msa0317310 | Msa1341070 | 0.811507 | 6.763824e-51 | -8.615850e-47 |
| Msa0331700 | Msa1341070 | 0.802224 | 6.210124e-49 | -8.615850e-47 |
| Msa0337650 | Msa1341070 | 0.837366 | 5.422068e-57 | -8.615850e-47 |
| Msa0349060 | Msa1341070 | 0.801659 | 8.113760e-49 | -8.615850e-47 |
| Msa0355270 | Msa1341070 | 0.808167 | 3.537612e-50 | -8.615850e-47 |
| Msa0358170 | Msa1341070 | 0.800210 | 1.603903e-48 | -8.615850e-47 |
| Msa1119200 | Msa1341070 | 0.807409 | 5.126995e-50 | -8.615850e-47 |
| Msa1126510 | Msa1341070 | 0.855876 | 4.699788e-62 | -8.615850e-47 |
| Msa1126770 | Msa1341070 | 0.828219 | 1.015552e-54 | -8.615850e-47 |
| Msa1127540 | Msa1341070 | 0.801419 | 9.084993e-49 | -8.615850e-47 |
| Msa1127890 | Msa1341070 | 0.800890 | 1.165492e-48 | -8.615850e-47 |
| Msa1130210 | Msa1341070 | -0.807108 | 5.938047e-50 | -8.615850e-47 |
| Msa1133400 | Msa1341070 | 0.802225 | 6.206419e-49 | -8.615850e-47 |
| Msa1134110 | Msa1341070 | 0.822044 | 2.924159e-53 | -8.615850e-47 |
| Msa1137700 | Msa1341070 | 0.806070 | 9.832593e-50 | -8.615850e-47 |
| Msa1138870 | Msa1341070 | 0.848596 | 5.542937e-60 | -8.615850e-47 |
| Msa1147900 | Msa1341070 | 0.800655 | 1.301464e-48 | -8.615850e-47 |
| Msa1158230 | Msa1341070 | 0.802176 | 6.352554e-49 | -8.615850e-47 |
| Msa1165870 | Msa1341070 | 0.815291 | 9.969005e-52 | -8.615850e-47 |
| Msa1166010 | Msa1341070 | 0.812812 | 3.511712e-51 | -8.615850e-47 |
| Msa1166860 | Msa1341070 | 0.841836 | 3.732466e-58 | -8.615850e-47 |
| Msa1166870 | Msa1341070 | 0.857795 | 1.279864e-62 | -8.615850e-47 |
| Msa1171360 | Msa1341070 | 0.821344 | 4.245306e-53 | -8.615850e-47 |
| Msa1174100 | Msa1341070 | 0.836558 | 8.720291e-57 | -8.615850e-47 |
| Msa1183660 | Msa1341070 | 0.817079 | 3.971565e-52 | -8.615850e-47 |
| Msa1184370 | Msa1341070 | 0.800726 | 1.258683e-48 | -8.615850e-47 |
| Msa1186800 | Msa1341070 | 0.804641 | 1.959288e-49 | -8.615850e-47 |
| Msa1192850 | Msa1341070 | 0.807772 | 4.293484e-50 | -8.615850e-47 |
| Msa1198530 | Msa1341070 | 0.803658 | 3.137784e-49 | -8.615850e-47 |
| Msa1201650 | Msa1341070 | 0.839277 | 1.745071e-57 | -8.615850e-47 |
| Msa1201830 | Msa1341070 | 0.827762 | 1.307581e-54 | -8.615850e-47 |
| Msa1202580 | Msa1341070 | 0.811940 | 5.443467e-51 | -8.615850e-47 |
| Msa1204250 | Msa1341070 | 0.815360 | 9.620890e-52 | -8.615850e-47 |
| Msa1207270 | Msa1341070 | 0.846768 | 1.765304e-59 | -8.615850e-47 |
| Msa1218600 | Msa1341070 | 0.819184 | 1.327251e-52 | -8.615850e-47 |
| Msa0506890 | Msa1341070 | 0.802918 | 4.465245e-49 | -8.615850e-47 |
| Msa0506940 | Msa1341070 | 0.803339 | 3.654789e-49 | -8.615850e-47 |
| Msa0508590 | Msa1341070 | 0.823269 | 1.516759e-53 | -8.615850e-47 |
| Msa0508630 | Msa1341070 | 0.803760 | 2.988705e-49 | -8.615850e-47 |
| Msa0509950 | Msa1341070 | -0.820291 | 7.414184e-53 | -8.615850e-47 |
| Msa0516040 | Msa1341070 | 0.813025 | 3.154127e-51 | -8.615850e-47 |
| Msa0524590 | Msa1341070 | 0.852805 | 3.627955e-61 | -8.615850e-47 |
| Msa0525340 | Msa1341070 | 0.834448 | 2.979663e-56 | -8.615850e-47 |
| Msa0526540 | Msa1341070 | 0.879349 | 1.339860e-69 | -8.615850e-47 |
| Msa0527150 | Msa1341070 | 0.801362 | 9.332491e-49 | -8.615850e-47 |
| Msa0529680 | Msa1341070 | 0.800625 | 1.320323e-48 | -8.615850e-47 |
| Msa0535030 | Msa1341070 | 0.812080 | 5.075668e-51 | -8.615850e-47 |
| Msa0535060 | Msa1341070 | 0.805063 | 1.599597e-49 | -8.615850e-47 |
| Msa0541860 | Msa1341070 | 0.830994 | 2.146216e-55 | -8.615850e-47 |
| Msa0546360 | Msa1341070 | 0.818148 | 2.280357e-52 | -8.615850e-47 |
| Msa0552810 | Msa1341070 | 0.818895 | 1.543964e-52 | -8.615850e-47 |
| Msa0554290 | Msa1341070 | 0.808952 | 2.405582e-50 | -8.615850e-47 |
| Msa0560470 | Msa1341070 | 0.819646 | 1.041304e-52 | -8.615850e-47 |
| Msa0561430 | Msa1341070 | 0.815614 | 8.445348e-52 | -8.615850e-47 |
| Msa0568820 | Msa1341070 | 0.810613 | 1.056365e-50 | -8.615850e-47 |
| Msa0571920 | Msa1341070 | 0.838790 | 2.333240e-57 | -8.615850e-47 |
| Msa0576690 | Msa1341070 | 0.877116 | 8.132161e-69 | -8.615850e-47 |
| Msa0576940 | Msa1341070 | 0.874785 | 5.148482e-68 | -8.615850e-47 |
| Msa0581070 | Msa1341070 | 0.843199 | 1.623294e-58 | -8.615850e-47 |
| Msa0590680 | Msa1341070 | 0.839048 | 1.999827e-57 | -8.615850e-47 |
| Msa0591060 | Msa1341070 | 0.815038 | 1.134296e-51 | -8.615850e-47 |
| Msa0591770 | Msa1341070 | 0.816549 | 5.221982e-52 | -8.615850e-47 |
| Msa0842830 | Msa1341070 | 0.811368 | 7.251064e-51 | -8.615850e-47 |
| Msa0850710 | Msa1341070 | 0.808679 | 2.750439e-50 | -8.615850e-47 |
| Msa0850960 | Msa1341070 | 0.817620 | 3.000463e-52 | -8.615850e-47 |
| Msa0864010 | Msa1341070 | 0.810032 | 1.409920e-50 | -8.615850e-47 |
| Msa0876200 | Msa1341070 | 0.802727 | 4.891070e-49 | -8.615850e-47 |
| Msa0879850 | Msa1341070 | 0.840021 | 1.117145e-57 | -8.615850e-47 |
| Msa0888940 | Msa1341070 | 0.803113 | 4.070437e-49 | -8.615850e-47 |
| Msa0898760 | Msa1341070 | 0.800211 | 1.602957e-48 | -8.615850e-47 |
| Msa0900630 | Msa1341070 | 0.816686 | 4.866131e-52 | -8.615850e-47 |
| Msa0902760 | Msa1341070 | 0.837232 | 5.870132e-57 | -8.615850e-47 |
| Msa0926460 | Msa1341070 | 0.809392 | 1.935526e-50 | -8.615850e-47 |
| Msa0930780 | Msa1341070 | 0.812165 | 4.864123e-51 | -8.615850e-47 |
| Msa0932570 | Msa1341070 | 0.821561 | 3.781097e-53 | -8.615850e-47 |
| Msa0936340 | Msa1341070 | 0.801782 | 7.655228e-49 | -8.615850e-47 |
| Msa0939790 | Msa1341070 | 0.827367 | 1.626959e-54 | -8.615850e-47 |
| Msa0947530 | Msa1341070 | -0.810207 | 1.292563e-50 | -8.615850e-47 |
| Msa0957450 | Msa1341070 | -0.808915 | 2.449026e-50 | -8.615850e-47 |
| Msa0968590 | Msa1341070 | 0.821342 | 4.248299e-53 | -8.615850e-47 |
| Msa0970530 | Msa1341070 | 0.808141 | 3.583801e-50 | -8.615850e-47 |
| Msa0970600 | Msa1341070 | 0.806988 | 6.294550e-50 | -8.615850e-47 |
| Msa0974810 | Msa1341070 | 0.854728 | 1.014836e-61 | -8.615850e-47 |
| Msa0976330 | Msa1341070 | 0.809577 | 1.766277e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1341070 | MtrunA17_Chr8g0372561 | 90.306 | 196 | 18 | 1 | 1 | 196 | 1 | 195 | 5.88e-107 | 305 |
| Msa1341070 | MtrunA17_Chr7g0234831 | 50.000 | 148 | 64 | 3 | 50 | 196 | 79 | 217 | 5.19e-33 | 117 |
| Msa1341070 | MtrunA17_Chr2g0293431 | 46.358 | 151 | 66 | 2 | 43 | 191 | 13 | 150 | 3.94e-32 | 114 |
| Msa1341070 | MtrunA17_Chr2g0310131 | 48.299 | 147 | 68 | 2 | 50 | 196 | 78 | 216 | 1.38e-31 | 114 |
| Msa1341070 | MtrunA17_Chr2g0293341 | 46.250 | 160 | 69 | 4 | 41 | 196 | 44 | 190 | 1.03e-30 | 110 |
| Msa1341070 | MtrunA17_Chr6g0450121 | 33.824 | 136 | 72 | 1 | 60 | 195 | 63 | 180 | 8.18e-12 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1341070 | AT4G36420.1 | 51.613 | 186 | 77 | 4 | 17 | 196 | 1 | 179 | 7.77e-50 | 160 |
| Msa1341070 | AT1G70190.2 | 48.649 | 148 | 72 | 1 | 49 | 196 | 65 | 208 | 2.98e-33 | 118 |
| Msa1341070 | AT1G70190.1 | 48.649 | 148 | 72 | 1 | 49 | 196 | 65 | 208 | 2.98e-33 | 118 |
| Msa1341070 | AT3G06040.3 | 63.441 | 93 | 30 | 1 | 104 | 196 | 98 | 186 | 2.85e-29 | 107 |
| Msa1341070 | AT3G06040.2 | 63.441 | 93 | 30 | 1 | 104 | 196 | 98 | 186 | 2.85e-29 | 107 |
| Msa1341070 | AT3G06040.1 | 63.441 | 93 | 30 | 1 | 104 | 196 | 98 | 186 | 2.85e-29 | 107 |
| Msa1341070 | AT4G37660.1 | 42.857 | 161 | 74 | 3 | 38 | 196 | 23 | 167 | 4.58e-25 | 96.3 |
| Msa1341070 | AT3G27850.1 | 38.194 | 144 | 73 | 1 | 52 | 195 | 59 | 186 | 3.33e-18 | 79.0 |
| Msa1341070 | AT3G27830.2 | 38.194 | 144 | 73 | 1 | 52 | 195 | 63 | 190 | 3.36e-18 | 79.0 |
| Msa1341070 | AT3G27830.1 | 38.194 | 144 | 73 | 1 | 52 | 195 | 63 | 190 | 3.36e-18 | 79.0 |
| Msa1341070 | AT2G03130.1 | 49.438 | 89 | 41 | 1 | 108 | 196 | 7 | 91 | 5.97e-16 | 70.9 |
| Msa1341070 | AT3G27840.1 | 30.682 | 176 | 104 | 2 | 23 | 195 | 32 | 192 | 2.01e-15 | 71.6 |
Find 52 sgRNAs with CRISPR-Local
Find 76 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGGTGAGAAAGGAAATT+AGG | 0.194585 | tig0004716:+5273 | None:intergenic |
| TGAAGTGATGCGTGAGAAAA+AGG | 0.246427 | tig0004716:-5109 | Msa1341070:CDS |
| TGGTTCCTGGAATGGGAATA+AGG | 0.262636 | tig0004716:-5056 | Msa1341070:CDS |
| TGATGCGGCGTCAAAGATTA+AGG | 0.294083 | tig0004716:-4923 | Msa1341070:CDS |
| AGTTGGTGCTAAAGCTTCTA+TGG | 0.325399 | tig0004716:-4767 | Msa1341070:CDS |
| AGGTGTAGGTGGAGGGAAAG+GGG | 0.337630 | tig0004716:-5022 | Msa1341070:CDS |
| TTTGGTGAGAAAGGAAATTA+GGG | 0.344047 | tig0004716:+5274 | None:intergenic |
| TGCGGAGATGTGAGAATTGT+AGG | 0.346963 | tig0004716:+5313 | None:intergenic |
| TTAAGGTTATTAAAGAAGTT+AGG | 0.362138 | tig0004716:-4906 | Msa1341070:CDS |
| GGTTCCTGGAATGGGAATAA+GGG | 0.368867 | tig0004716:-5055 | Msa1341070:CDS |
| GCGTTTGATGTGAAGCTTGA+TGG | 0.371046 | tig0004716:-4949 | Msa1341070:CDS |
| ATTCCCCTTATTCCCATTCC+AGG | 0.371516 | tig0004716:+5051 | None:intergenic |
| GGTGTAGGTGGAGGGAAAGG+GGG | 0.396694 | tig0004716:-5021 | Msa1341070:CDS |
| ATTATGATGTTGATGGTTCC+TGG | 0.398854 | tig0004716:-5069 | Msa1341070:CDS |
| GCTTCCGATTATGATGTTGA+TGG | 0.408175 | tig0004716:-5076 | Msa1341070:CDS |
| AGAGGTGTAGGTGGAGGGAA+AGG | 0.431861 | tig0004716:-5024 | Msa1341070:CDS |
| GTTGAAGGAAGCTAAGGATT+TGG | 0.435359 | tig0004716:-4866 | Msa1341070:CDS |
| GGAACCATCAACATCATAAT+CGG | 0.459221 | tig0004716:+5072 | None:intergenic |
| ATTGCTAAGTTGAAGGAAGT+TGG | 0.461667 | tig0004716:-4784 | Msa1341070:CDS |
| GGGGATTATTGCTAAGTTGA+AGG | 0.470094 | tig0004716:-4791 | Msa1341070:CDS |
| GAGGTGTAGGTGGAGGGAAA+GGG | 0.479166 | tig0004716:-5023 | Msa1341070:CDS |
| TATGGAGGTGGATTTGCATT+GGG | 0.481396 | tig0004716:+5230 | None:intergenic |
| GTATGGAGGTGGATTTGCAT+TGG | 0.489491 | tig0004716:+5229 | None:intergenic |
| TTTGCATTGGGAGAGGATGC+AGG | 0.489536 | tig0004716:+5242 | None:intergenic |
| ATGCCGAGAGGTGTAGGTGG+AGG | 0.492930 | tig0004716:-5030 | Msa1341070:CDS |
| TGTGACGAAGGAAGAGGCCG+AGG | 0.503668 | tig0004716:-4812 | Msa1341070:CDS |
| GATGTTGATGGTTCCTGGAA+TGG | 0.504794 | tig0004716:-5064 | Msa1341070:CDS |
| TTCGGGATTCGGTGAATCGG+TGG | 0.512716 | tig0004716:+5194 | None:intergenic |
| TTTGGGGTTGAAGGAAGCTA+AGG | 0.515112 | tig0004716:-4872 | Msa1341070:CDS |
| GGTGGTGTAATTGCGGCGTA+TGG | 0.529938 | tig0004716:+5212 | None:intergenic |
| GTAATTGCGGCGTATGGAGG+TGG | 0.535225 | tig0004716:+5218 | None:intergenic |
| ATGTTGATGGTTCCTGGAAT+GGG | 0.541612 | tig0004716:-5063 | Msa1341070:CDS |
| AGGGGAATGCCGAGAGGTGT+AGG | 0.541839 | tig0004716:-5036 | Msa1341070:CDS |
| AGGTGGATTTGCATTGGGAG+AGG | 0.544913 | tig0004716:+5235 | None:intergenic |
| GAAGGAAGCTAAGGATTTGG+TGG | 0.548600 | tig0004716:-4863 | Msa1341070:CDS |
| CAACTTAGCAATAATCCCCT+CGG | 0.570601 | tig0004716:+4795 | None:intergenic |
| GGGTGAGGTGAAGAAAGTTG+AGG | 0.571665 | tig0004716:-4980 | Msa1341070:CDS |
| GAAAGGTGTGACGAAGGAAG+AGG | 0.571984 | tig0004716:-4818 | Msa1341070:CDS |
| GGTGTAATTGCGGCGTATGG+AGG | 0.572681 | tig0004716:+5215 | None:intergenic |
| TTCCCTCCACCTACACCTCT+CGG | 0.576289 | tig0004716:+5027 | None:intergenic |
| TGCCGAGAGGTGTAGGTGGA+GGG | 0.581642 | tig0004716:-5029 | Msa1341070:CDS |
| ATTAACGCTTCTCGAAGCAA+TGG | 0.603358 | tig0004716:-5139 | Msa1341070:CDS |
| GTGAATCGGTGGTGTAATTG+CGG | 0.609756 | tig0004716:+5205 | None:intergenic |
| GTGACGAAGGAAGAGGCCGA+GGG | 0.612413 | tig0004716:-4811 | Msa1341070:CDS |
| GGAATGCCGAGAGGTGTAGG+TGG | 0.612707 | tig0004716:-5033 | Msa1341070:CDS |
| GCAATCGTCGACGAACTCGC+GGG | 0.626410 | tig0004716:-5162 | Msa1341070:CDS |
| ACACCTTTCTTCAAAAGCGT+AGG | 0.629486 | tig0004716:+4832 | None:intergenic |
| AGCAATCGTCGACGAACTCG+CGG | 0.632941 | tig0004716:-5163 | Msa1341070:CDS |
| GTTCCTGGAATGGGAATAAG+GGG | 0.637463 | tig0004716:-5054 | Msa1341070:CDS |
| TTTGAAGAAAGGTGTGACGA+AGG | 0.649602 | tig0004716:-4824 | Msa1341070:CDS |
| TGACGAAGGAAGAGGCCGAG+GGG | 0.703464 | tig0004716:-4810 | Msa1341070:CDS |
| GGAATAAGGGGAATGCCGAG+AGG | 0.729602 | tig0004716:-5042 | Msa1341070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAGGTTATTAAAGAAGTT+AGG | - | tig0004716:5186-5205 | Msa1341070:CDS | 20.0% |
| !!! | GAAATTAGGGTTTTGAATTA+GGG | + | tig0004716:4808-4827 | None:intergenic | 25.0% |
| !!! | GGAAATTAGGGTTTTGAATT+AGG | + | tig0004716:4809-4828 | None:intergenic | 30.0% |
| TTTGGTGAGAAAGGAAATTA+GGG | + | tig0004716:4821-4840 | None:intergenic | 30.0% | |
| ! | ATTTGGTGAGAAAGGAAATT+AGG | + | tig0004716:4822-4841 | None:intergenic | 30.0% |
| !!! | TTTTTGGAATTTGGTGAGAA+AGG | + | tig0004716:4830-4849 | None:intergenic | 30.0% |
| ! | AGTTAGGAGTTTTACTAGTT+TGG | - | tig0004716:5202-5221 | Msa1341070:CDS | 30.0% |
| !! | GTTAGGAGTTTTACTAGTTT+GGG | - | tig0004716:5203-5222 | Msa1341070:CDS | 30.0% |
| !! | TTAGGAGTTTTACTAGTTTG+GGG | - | tig0004716:5204-5223 | Msa1341070:CDS | 30.0% |
| !!! | GGTTTTGAATTAGGGTTTTG+CGG | + | tig0004716:4800-4819 | None:intergenic | 35.0% |
| !!! | ACGATTGCTGATACTTTTTC+GGG | + | tig0004716:4918-4937 | None:intergenic | 35.0% |
| !! | GACGATTGCTGATACTTTTT+CGG | + | tig0004716:4919-4938 | None:intergenic | 35.0% |
| GGAACCATCAACATCATAAT+CGG | + | tig0004716:5023-5042 | None:intergenic | 35.0% | |
| !! | ATTATGATGTTGATGGTTCC+TGG | - | tig0004716:5023-5042 | Msa1341070:CDS | 35.0% |
| !! | TTTTACTAGTTTGGGGTTGA+AGG | - | tig0004716:5211-5230 | Msa1341070:CDS | 35.0% |
| ! | ATTGCTAAGTTGAAGGAAGT+TGG | - | tig0004716:5308-5327 | Msa1341070:CDS | 35.0% |
| !!! | GGATGCAGGTTTTTGGAATT+TGG | + | tig0004716:4839-4858 | None:intergenic | 40.0% |
| ! | TATGGAGGTGGATTTGCATT+GGG | + | tig0004716:4865-4884 | None:intergenic | 40.0% |
| !!! | TTTTTCGGGATTCGGTGAAT+CGG | + | tig0004716:4904-4923 | None:intergenic | 40.0% |
| !!! | GCTGATACTTTTTCGGGATT+CGG | + | tig0004716:4912-4931 | None:intergenic | 40.0% |
| ATTAACGCTTCTCGAAGCAA+TGG | - | tig0004716:4953-4972 | Msa1341070:CDS | 40.0% | |
| TGAAGTGATGCGTGAGAAAA+AGG | - | tig0004716:4983-5002 | Msa1341070:CDS | 40.0% | |
| GAAGTGATGCGTGAGAAAAA+GGG | - | tig0004716:4984-5003 | Msa1341070:CDS | 40.0% | |
| GCTTCCGATTATGATGTTGA+TGG | - | tig0004716:5016-5035 | Msa1341070:CDS | 40.0% | |
| !! | ATGTTGATGGTTCCTGGAAT+GGG | - | tig0004716:5029-5048 | Msa1341070:CDS | 40.0% |
| !!! | GAAGCTTGATGGTTTTGATG+CGG | - | tig0004716:5154-5173 | Msa1341070:CDS | 40.0% |
| GTTGAAGGAAGCTAAGGATT+TGG | - | tig0004716:5226-5245 | Msa1341070:CDS | 40.0% | |
| ! | ACACCTTTCTTCAAAAGCGT+AGG | + | tig0004716:5263-5282 | None:intergenic | 40.0% |
| ! | TTTGAAGAAAGGTGTGACGA+AGG | - | tig0004716:5268-5287 | Msa1341070:CDS | 40.0% |
| CAACTTAGCAATAATCCCCT+CGG | + | tig0004716:5300-5319 | None:intergenic | 40.0% | |
| ! | GGGGATTATTGCTAAGTTGA+AGG | - | tig0004716:5301-5320 | Msa1341070:CDS | 40.0% |
| !! | AGTTGGTGCTAAAGCTTCTA+TGG | - | tig0004716:5325-5344 | Msa1341070:CDS | 40.0% |
| TGCGGAGATGTGAGAATTGT+AGG | + | tig0004716:4782-4801 | None:intergenic | 45.0% | |
| ! | GTATGGAGGTGGATTTGCAT+TGG | + | tig0004716:4866-4885 | None:intergenic | 45.0% |
| GTGAATCGGTGGTGTAATTG+CGG | + | tig0004716:4890-4909 | None:intergenic | 45.0% | |
| !! | GATGTTGATGGTTCCTGGAA+TGG | - | tig0004716:5028-5047 | Msa1341070:CDS | 45.0% |
| TGGTTCCTGGAATGGGAATA+AGG | - | tig0004716:5036-5055 | Msa1341070:CDS | 45.0% | |
| GGTTCCTGGAATGGGAATAA+GGG | - | tig0004716:5037-5056 | Msa1341070:CDS | 45.0% | |
| GTTCCTGGAATGGGAATAAG+GGG | - | tig0004716:5038-5057 | Msa1341070:CDS | 45.0% | |
| ATTCCCCTTATTCCCATTCC+AGG | + | tig0004716:5044-5063 | None:intergenic | 45.0% | |
| GCGTTTGATGTGAAGCTTGA+TGG | - | tig0004716:5143-5162 | Msa1341070:CDS | 45.0% | |
| TGATGCGGCGTCAAAGATTA+AGG | - | tig0004716:5169-5188 | Msa1341070:CDS | 45.0% | |
| ! | TTTGGGGTTGAAGGAAGCTA+AGG | - | tig0004716:5220-5239 | Msa1341070:CDS | 45.0% |
| GAAGGAAGCTAAGGATTTGG+TGG | - | tig0004716:5229-5248 | Msa1341070:CDS | 45.0% | |
| !! | TCGCCTACGCTTTTGAAGAA+AGG | - | tig0004716:5257-5276 | Msa1341070:CDS | 45.0% |
| ! | TGGGAGAGGATGCAGGTTTT+TGG | + | tig0004716:4846-4865 | None:intergenic | 50.0% |
| TTTGCATTGGGAGAGGATGC+AGG | + | tig0004716:4853-4872 | None:intergenic | 50.0% | |
| ! | AGGTGGATTTGCATTGGGAG+AGG | + | tig0004716:4860-4879 | None:intergenic | 50.0% |
| ! | GGGGTGGTGGTAGTGAAAAA+GGG | - | tig0004716:5090-5109 | Msa1341070:CDS | 50.0% |
| ! | GGGTGGTGGTAGTGAAAAAG+GGG | - | tig0004716:5091-5110 | Msa1341070:CDS | 50.0% |
| ! | GGTGGTGGTAGTGAAAAAGG+GGG | - | tig0004716:5092-5111 | Msa1341070:CDS | 50.0% |
| ! | TGGTAGTGAAAAAGGGGGTG+AGG | - | tig0004716:5097-5116 | Msa1341070:CDS | 50.0% |
| GGGTGAGGTGAAGAAAGTTG+AGG | - | tig0004716:5112-5131 | Msa1341070:CDS | 50.0% | |
| ! | GAAAGGTGTGACGAAGGAAG+AGG | - | tig0004716:5274-5293 | Msa1341070:CDS | 50.0% |
| GTAATTGCGGCGTATGGAGG+TGG | + | tig0004716:4877-4896 | None:intergenic | 55.0% | |
| GGTGTAATTGCGGCGTATGG+AGG | + | tig0004716:4880-4899 | None:intergenic | 55.0% | |
| GGTGGTGTAATTGCGGCGTA+TGG | + | tig0004716:4883-4902 | None:intergenic | 55.0% | |
| !! | TTCGGGATTCGGTGAATCGG+TGG | + | tig0004716:4901-4920 | None:intergenic | 55.0% |
| AGCAATCGTCGACGAACTCG+CGG | - | tig0004716:4929-4948 | Msa1341070:CDS | 55.0% | |
| GGAATAAGGGGAATGCCGAG+AGG | - | tig0004716:5050-5069 | Msa1341070:CDS | 55.0% | |
| TTCCCTCCACCTACACCTCT+CGG | + | tig0004716:5068-5087 | None:intergenic | 55.0% | |
| ! | AGAGGTGTAGGTGGAGGGAA+AGG | - | tig0004716:5068-5087 | Msa1341070:CDS | 55.0% |
| GAGGTGTAGGTGGAGGGAAA+GGG | - | tig0004716:5069-5088 | Msa1341070:CDS | 55.0% | |
| AGGTGTAGGTGGAGGGAAAG+GGG | - | tig0004716:5070-5089 | Msa1341070:CDS | 55.0% | |
| ! | GGGGGTGGTGGTAGTGAAAA+AGG | - | tig0004716:5089-5108 | Msa1341070:CDS | 55.0% |
| GCAATCGTCGACGAACTCGC+GGG | - | tig0004716:4930-4949 | Msa1341070:CDS | 60.0% | |
| ! | AGGGGAATGCCGAGAGGTGT+AGG | - | tig0004716:5056-5075 | Msa1341070:CDS | 60.0% |
| ! | GGAATGCCGAGAGGTGTAGG+TGG | - | tig0004716:5059-5078 | Msa1341070:CDS | 60.0% |
| ! | ATGCCGAGAGGTGTAGGTGG+AGG | - | tig0004716:5062-5081 | Msa1341070:CDS | 60.0% |
| ! | TGCCGAGAGGTGTAGGTGGA+GGG | - | tig0004716:5063-5082 | Msa1341070:CDS | 60.0% |
| GGTGTAGGTGGAGGGAAAGG+GGG | - | tig0004716:5071-5090 | Msa1341070:CDS | 60.0% | |
| TGTGACGAAGGAAGAGGCCG+AGG | - | tig0004716:5280-5299 | Msa1341070:CDS | 60.0% | |
| GTGACGAAGGAAGAGGCCGA+GGG | - | tig0004716:5281-5300 | Msa1341070:CDS | 60.0% | |
| TGACGAAGGAAGAGGCCGAG+GGG | - | tig0004716:5282-5301 | Msa1341070:CDS | 60.0% | |
| GTAGGTGGAGGGAAAGGGGG+TGG | - | tig0004716:5074-5093 | Msa1341070:CDS | 65.0% | |
| GGTGGAGGGAAAGGGGGTGG+TGG | - | tig0004716:5077-5096 | Msa1341070:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0004716 | gene | 4762 | 5352 | 4762 | ID=Msa1341070;Name=Msa1341070 |
| tig0004716 | mRNA | 4762 | 5352 | 4762 | ID=Msa1341070-mRNA-1;Parent=Msa1341070;Name=Msa1341070-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|196 |
| tig0004716 | exon | 4762 | 5352 | 4762 | ID=Msa1341070-mRNA-1:exon:2972;Parent=Msa1341070-mRNA-1 |
| tig0004716 | CDS | 4762 | 5352 | 4762 | ID=Msa1341070-mRNA-1:cds;Parent=Msa1341070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
