Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018050 | XP_013448465.1 | 93.856 | 472 | 14 | 4 | 1 | 459 | 1 | 470 | 0.0 | 890 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018050 | sp|Q9M8M7|ARGD_ARATH | 76.322 | 397 | 92 | 1 | 62 | 456 | 61 | 457 | 0.0 | 644 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018050 | A0A072TYI8 | 93.856 | 472 | 14 | 4 | 1 | 459 | 1 | 470 | 0.0 | 890 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa1018050 | 0.805210 | 1.490178e-49 | -8.615850e-47 |
| Msa0008830 | Msa1018050 | 0.803491 | 3.399378e-49 | -8.615850e-47 |
| Msa0011720 | Msa1018050 | 0.800565 | 1.358088e-48 | -8.615850e-47 |
| Msa0011850 | Msa1018050 | 0.813265 | 2.793102e-51 | -8.615850e-47 |
| Msa0028060 | Msa1018050 | 0.807736 | 4.368678e-50 | -8.615850e-47 |
| Msa0029710 | Msa1018050 | 0.827779 | 1.295417e-54 | -8.615850e-47 |
| Msa0032120 | Msa1018050 | 0.819966 | 8.799754e-53 | -8.615850e-47 |
| Msa0051000 | Msa1018050 | 0.814188 | 1.749219e-51 | -8.615850e-47 |
| Msa0075310 | Msa1018050 | 0.802435 | 5.617319e-49 | -8.615850e-47 |
| Msa0077200 | Msa1018050 | 0.816109 | 6.550093e-52 | -8.615850e-47 |
| Msa0095380 | Msa1018050 | 0.803638 | 3.168121e-49 | -8.615850e-47 |
| Msa0096670 | Msa1018050 | 0.819683 | 1.021154e-52 | -8.615850e-47 |
| Msa0105420 | Msa1018050 | 0.823113 | 1.649440e-53 | -8.615850e-47 |
| Msa0109950 | Msa1018050 | 0.803208 | 3.890787e-49 | -8.615850e-47 |
| Msa0120330 | Msa1018050 | 0.811455 | 6.940678e-51 | -8.615850e-47 |
| Msa0638690 | Msa1018050 | 0.805673 | 1.191426e-49 | -8.615850e-47 |
| Msa0670980 | Msa1018050 | 0.800948 | 1.134251e-48 | -8.615850e-47 |
| Msa0697400 | Msa1018050 | 0.811549 | 6.623699e-51 | -8.615850e-47 |
| Msa0755340 | Msa1018050 | 0.823146 | 1.620631e-53 | -8.615850e-47 |
| Msa0803920 | Msa1018050 | 0.820104 | 8.179105e-53 | -8.615850e-47 |
| Msa0827620 | Msa1018050 | -0.801861 | 7.373455e-49 | -8.615850e-47 |
| Msa0124990 | Msa1018050 | 0.820448 | 6.822747e-53 | -8.615850e-47 |
| Msa0149620 | Msa1018050 | 0.817798 | 2.735247e-52 | -8.615850e-47 |
| Msa0168100 | Msa1018050 | 0.810013 | 1.423133e-50 | -8.615850e-47 |
| Msa0169690 | Msa1018050 | 0.821929 | 3.108504e-53 | -8.615850e-47 |
| Msa0172350 | Msa1018050 | 0.803219 | 3.870353e-49 | -8.615850e-47 |
| Msa0207000 | Msa1018050 | 0.824645 | 7.216556e-54 | -8.615850e-47 |
| Msa0223250 | Msa1018050 | 0.802762 | 4.809111e-49 | -8.615850e-47 |
| Msa0228480 | Msa1018050 | 0.812330 | 4.475110e-51 | -8.615850e-47 |
| Msa0235890 | Msa1018050 | 0.802936 | 4.427814e-49 | -8.615850e-47 |
| Msa0235980 | Msa1018050 | 0.801526 | 8.638173e-49 | -8.615850e-47 |
| Msa0413720 | Msa1018050 | 0.812895 | 3.367531e-51 | -8.615850e-47 |
| Msa0423360 | Msa1018050 | -0.806661 | 7.381995e-50 | -8.615850e-47 |
| Msa0425940 | Msa1018050 | 0.807887 | 4.057159e-50 | -8.615850e-47 |
| Msa0426160 | Msa1018050 | 0.815637 | 8.348414e-52 | -8.615850e-47 |
| Msa0426330 | Msa1018050 | 0.802543 | 5.337859e-49 | -8.615850e-47 |
| Msa0480320 | Msa1018050 | 0.815500 | 8.956722e-52 | -8.615850e-47 |
| Msa0981000 | Msa1018050 | 0.816223 | 6.176423e-52 | -8.615850e-47 |
| Msa0993530 | Msa1018050 | 0.806375 | 8.481847e-50 | -8.615850e-47 |
| Msa1000940 | Msa1018050 | 0.805204 | 1.494166e-49 | -8.615850e-47 |
| Msa1018050 | Msa1018790 | 0.802152 | 6.424955e-49 | -8.615850e-47 |
| Msa1018050 | Msa1020710 | 0.809298 | 2.027964e-50 | -8.615850e-47 |
| Msa1018050 | Msa1037920 | 0.808457 | 3.068762e-50 | -8.615850e-47 |
| Msa1018050 | Msa1139810 | 0.800067 | 1.714579e-48 | -8.615850e-47 |
| Msa1018050 | Msa1185540 | 0.831276 | 1.830112e-55 | -8.615850e-47 |
| Msa1018050 | Msa1217860 | 0.820001 | 8.637789e-53 | -8.615850e-47 |
| Msa1018050 | Msa1226510 | 0.807107 | 5.941694e-50 | -8.615850e-47 |
| Msa1018050 | Msa1226620 | 0.836740 | 7.838497e-57 | -8.615850e-47 |
| Msa1018050 | Msa1228890 | 0.805827 | 1.106101e-49 | -8.615850e-47 |
| Msa1018050 | Msa1237030 | 0.837509 | 4.984856e-57 | -8.615850e-47 |
| Msa1018050 | Msa1240540 | 0.804821 | 1.796792e-49 | -8.615850e-47 |
| Msa1018050 | Msa1252190 | 0.807016 | 6.208994e-50 | -8.615850e-47 |
| Msa1018050 | Msa1261010 | 0.807905 | 4.022277e-50 | -8.615850e-47 |
| Msa1018050 | Msa1280130 | 0.801244 | 9.865234e-49 | -8.615850e-47 |
| Msa1018050 | Msa1280560 | 0.807459 | 5.002092e-50 | -8.615850e-47 |
| Msa1018050 | Msa1282010 | 0.809769 | 1.606464e-50 | -8.615850e-47 |
| Msa1018050 | Msa1284300 | 0.802473 | 5.518413e-49 | -8.615850e-47 |
| Msa1018050 | Msa1284520 | 0.813074 | 3.076461e-51 | -8.615850e-47 |
| Msa1018050 | Msa1316050 | 0.807959 | 3.916980e-50 | -8.615850e-47 |
| Msa1018050 | Msa1316830 | 0.803177 | 3.948237e-49 | -8.615850e-47 |
| Msa1018050 | Msa1318120 | 0.825148 | 5.488587e-54 | -8.615850e-47 |
| Msa1018050 | Msa1320740 | 0.830884 | 2.283831e-55 | -8.615850e-47 |
| Msa1018050 | Msa1358550 | 0.805078 | 1.587580e-49 | -8.615850e-47 |
| Msa1018050 | Msa1362510 | 0.833887 | 4.118407e-56 | -8.615850e-47 |
| Msa1018050 | Msa1382310 | 0.815701 | 8.077803e-52 | -8.615850e-47 |
| Msa1018050 | Msa1398480 | 0.813549 | 2.420020e-51 | -8.615850e-47 |
| Msa1018050 | Msa1412140 | 0.824648 | 7.204944e-54 | -8.615850e-47 |
| Msa1018050 | Msa1425250 | 0.817988 | 2.478099e-52 | -8.615850e-47 |
| Msa1018050 | Msa1439960 | 0.820040 | 8.461906e-53 | -8.615850e-47 |
| Msa0246690 | Msa1018050 | 0.820135 | 8.049790e-53 | -8.615850e-47 |
| Msa0259560 | Msa1018050 | 0.805812 | 1.114218e-49 | -8.615850e-47 |
| Msa0267760 | Msa1018050 | 0.805153 | 1.531449e-49 | -8.615850e-47 |
| Msa0304300 | Msa1018050 | 0.801440 | 8.994122e-49 | -8.615850e-47 |
| Msa0305640 | Msa1018050 | 0.801479 | 8.829960e-49 | -8.615850e-47 |
| Msa0308830 | Msa1018050 | 0.803098 | 4.099842e-49 | -8.615850e-47 |
| Msa0505370 | Msa1018050 | 0.810316 | 1.224874e-50 | -8.615850e-47 |
| Msa0521880 | Msa1018050 | 0.804941 | 1.696518e-49 | -8.615850e-47 |
| Msa0526710 | Msa1018050 | 0.803671 | 3.119209e-49 | -8.615850e-47 |
| Msa0527590 | Msa1018050 | 0.802018 | 6.844657e-49 | -8.615850e-47 |
| Msa0546840 | Msa1018050 | 0.834019 | 3.818171e-56 | -8.615850e-47 |
| Msa0574890 | Msa1018050 | 0.828921 | 6.869477e-55 | -8.615850e-47 |
| Msa0576690 | Msa1018050 | 0.806331 | 8.665257e-50 | -8.615850e-47 |
| Msa0591060 | Msa1018050 | 0.805533 | 1.274790e-49 | -8.615850e-47 |
| Msa0591770 | Msa1018050 | 0.804852 | 1.770051e-49 | -8.615850e-47 |
| Msa0845750 | Msa1018050 | 0.814758 | 1.308528e-51 | -8.615850e-47 |
| Msa0862100 | Msa1018050 | 0.802316 | 5.944920e-49 | -8.615850e-47 |
| Msa0890250 | Msa1018050 | 0.803083 | 4.128156e-49 | -8.615850e-47 |
| Msa0912600 | Msa1018050 | 0.811083 | 8.357635e-51 | -8.615850e-47 |
| Msa0930780 | Msa1018050 | 0.834169 | 3.501951e-56 | -8.615850e-47 |
| Msa0946320 | Msa1018050 | 0.806860 | 6.699294e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018050 | MtrunA17_Chr7g0233361 | 93.856 | 472 | 14 | 4 | 1 | 459 | 1 | 470 | 0.0 | 890 |
| Msa1018050 | MtrunA17_Chr8g0376561 | 34.772 | 417 | 252 | 9 | 53 | 454 | 27 | 438 | 2.61e-63 | 212 |
| Msa1018050 | MtrunA17_Chr7g0244421 | 30.562 | 409 | 245 | 9 | 74 | 452 | 79 | 478 | 2.32e-49 | 175 |
| Msa1018050 | MtrunA17_Chr8g0382871 | 30.562 | 409 | 245 | 12 | 74 | 452 | 79 | 478 | 2.61e-44 | 161 |
| Msa1018050 | MtrunA17_Chr4g0038831 | 28.000 | 425 | 251 | 13 | 78 | 453 | 81 | 499 | 3.06e-39 | 148 |
| Msa1018050 | MtrunA17_Chr3g0145711 | 33.445 | 299 | 170 | 9 | 78 | 360 | 76 | 361 | 5.76e-34 | 132 |
| Msa1018050 | MtrunA17_Chr3g0106581 | 32.967 | 273 | 148 | 8 | 62 | 310 | 56 | 317 | 5.88e-33 | 127 |
| Msa1018050 | MtrunA17_Chr8g0336171 | 62.500 | 56 | 17 | 2 | 48 | 99 | 54 | 109 | 1.27e-14 | 70.1 |
| Msa1018050 | MtrunA17_Chr4g0072721 | 23.377 | 385 | 203 | 13 | 136 | 431 | 416 | 797 | 2.00e-14 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1018050 | AT1G80600.1 | 76.322 | 397 | 92 | 1 | 62 | 456 | 61 | 457 | 0.0 | 644 |
| Msa1018050 | AT5G46180.1 | 29.975 | 407 | 267 | 8 | 62 | 454 | 43 | 445 | 1.56e-51 | 181 |
| Msa1018050 | AT4G39660.1 | 29.935 | 461 | 266 | 11 | 28 | 455 | 40 | 476 | 1.23e-48 | 173 |
| Msa1018050 | AT2G38400.1 | 31.204 | 407 | 240 | 10 | 76 | 452 | 78 | 474 | 9.59e-48 | 171 |
| Msa1018050 | AT2G38400.2 | 32.152 | 395 | 228 | 10 | 76 | 440 | 78 | 462 | 5.80e-47 | 169 |
| Msa1018050 | AT3G08860.1 | 30.000 | 410 | 246 | 11 | 74 | 452 | 79 | 478 | 6.15e-46 | 166 |
| Msa1018050 | AT4G39660.2 | 31.514 | 403 | 237 | 9 | 83 | 455 | 8 | 401 | 8.51e-46 | 164 |
| Msa1018050 | AT3G08860.2 | 31.407 | 398 | 226 | 13 | 74 | 437 | 79 | 463 | 2.46e-44 | 162 |
| Msa1018050 | AT3G22200.1 | 28.505 | 428 | 244 | 13 | 78 | 452 | 70 | 488 | 2.94e-40 | 151 |
| Msa1018050 | AT3G22200.2 | 28.505 | 428 | 244 | 13 | 78 | 452 | 79 | 497 | 3.44e-40 | 151 |
| Msa1018050 | AT3G48730.1 | 29.595 | 321 | 174 | 11 | 78 | 369 | 80 | 377 | 5.70e-33 | 130 |
| Msa1018050 | AT5G63570.2 | 29.595 | 321 | 174 | 12 | 78 | 369 | 19 | 316 | 5.87e-31 | 124 |
| Msa1018050 | AT5G63570.1 | 30.195 | 308 | 166 | 11 | 78 | 359 | 82 | 366 | 1.35e-30 | 124 |
| Msa1018050 | AT5G57590.1 | 22.717 | 449 | 237 | 18 | 84 | 431 | 367 | 806 | 1.57e-13 | 73.6 |
Find 117 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCTCCAACATCTACTTTA+AGG | 0.107418 | 7_1:-37845159 | None:intergenic |
| AAACCAAACTTTGCATGTTT+TGG | 0.203977 | 7_1:+37850438 | Msa1018050:CDS |
| CTTTGGGCTCACGAGGCTTT+TGG | 0.210358 | 7_1:+37849971 | Msa1018050:CDS |
| TAGGTAGATCAGGATTTCTT+TGG | 0.249427 | 7_1:+37849954 | Msa1018050:CDS |
| GTCGCTTCTGCTATAAATTA+TGG | 0.260232 | 7_1:+37850073 | Msa1018050:CDS |
| GTAGATGCTTGCCGAAATTC+TGG | 0.264977 | 7_1:+37850319 | Msa1018050:CDS |
| CATCCAAAACATGCAAAGTT+TGG | 0.271659 | 7_1:-37850441 | None:intergenic |
| TGTTGAAGGGAATGAGTATT+TGG | 0.291665 | 7_1:+37845315 | Msa1018050:CDS |
| TTGTGTTGTTTGCAGAAATA+TGG | 0.296653 | 7_1:-37845036 | None:intergenic |
| CGTGGTGTGGGGCTAATTAT+AGG | 0.304746 | 7_1:+37850265 | Msa1018050:CDS |
| CGAAATGCTTGTGATGAAAC+TGG | 0.316827 | 7_1:+37849138 | Msa1018050:CDS |
| TTGTAGGTTCAATGTGGTTT+AGG | 0.327079 | 7_1:+37849935 | Msa1018050:intron |
| AAAGATGCTTTCTTTCTTGC+TGG | 0.341640 | 7_1:+37850484 | Msa1018050:three_prime_UTR |
| AGGTAGATCAGGATTTCTTT+GGG | 0.352648 | 7_1:+37849955 | Msa1018050:CDS |
| GATCGAGGGTAGTGAAGAAT+TGG | 0.360773 | 7_1:-37845115 | None:intergenic |
| CTGGAAAAGGTAATGTTGTT+AGG | 0.365988 | 7_1:+37850359 | Msa1018050:CDS |
| GGAGTAACCTTTGTAGAGTA+TGG | 0.366693 | 7_1:+37848997 | Msa1018050:CDS |
| TTTGGCAAGTGTCATTATAT+CGG | 0.381895 | 7_1:-37850002 | None:intergenic |
| ATACTAGAAGGCCAGAATTT+CGG | 0.383681 | 7_1:-37850330 | None:intergenic |
| TGCTCCAACATCTACTTTAA+GGG | 0.386778 | 7_1:-37845158 | None:intergenic |
| CAATGTGGTTTAGGTAGATC+AGG | 0.393669 | 7_1:+37849944 | Msa1018050:CDS |
| ATCGAGGGTAGTGAAGAATT+GGG | 0.396352 | 7_1:-37845114 | None:intergenic |
| TTGGCAAGTGTCATTATATC+GGG | 0.403382 | 7_1:-37850001 | None:intergenic |
| CGCTGTAGAGTTAATTCAGC+AGG | 0.404452 | 7_1:+37849032 | Msa1018050:CDS |
| TTCCAGCTGTCAATACTAGA+AGG | 0.404872 | 7_1:-37850342 | None:intergenic |
| TATAGCAGAAGCGACTTTCT+CGG | 0.409460 | 7_1:-37850065 | None:intergenic |
| ACCATTGATTATAACAGAAC+AGG | 0.410210 | 7_1:+37850390 | Msa1018050:CDS |
| TTCCCTTTCTCAAGCACAAT+CGG | 0.410612 | 7_1:-37845274 | None:intergenic |
| CCCTCCTCTACAATTGCGTT+TGG | 0.412725 | 7_1:-37845181 | None:intergenic |
| CTGGCTGGAGGCCTACCTAT+TGG | 0.419628 | 7_1:+37850028 | Msa1018050:CDS |
| CTATCTGATGTATCAAAGAA+AGG | 0.423170 | 7_1:+37850181 | Msa1018050:CDS |
| GATACATCAGATAGGAAAGT+AGG | 0.426197 | 7_1:-37850172 | None:intergenic |
| TCCTGTTCTGTTATAATCAA+TGG | 0.426804 | 7_1:-37850391 | None:intergenic |
| GTTACGAGGACGGCTCCAAT+AGG | 0.437400 | 7_1:-37850043 | None:intergenic |
| AAGGTTACTCCAGGCATAAC+AGG | 0.443360 | 7_1:-37848985 | None:intergenic |
| CTTTCTTTGATACATCAGAT+AGG | 0.446280 | 7_1:-37850180 | None:intergenic |
| TGCTTCCATGGGAGAACCCT+GGG | 0.452270 | 7_1:+37848916 | Msa1018050:CDS |
| ATAAGTACCCACTATGTACT+TGG | 0.457777 | 7_1:-37845242 | None:intergenic |
| AGACTGTAGAAATTCTTTAG+TGG | 0.459904 | 7_1:-37849112 | None:intergenic |
| TTGGTCATGGTGATGATGAT+TGG | 0.462669 | 7_1:+37845368 | Msa1018050:CDS |
| GCACCGATTGTGCTTGAGAA+AGG | 0.463246 | 7_1:+37845271 | Msa1018050:CDS |
| TTTATTGTATAATAAATAAG+TGG | 0.466781 | 7_1:+37850590 | Msa1018050:three_prime_UTR |
| GAAATGGGTGAGTTTGTTGT+TGG | 0.468980 | 7_1:-37845065 | None:intergenic |
| GGATGCCAATAATTAAAAGT+AGG | 0.469072 | 7_1:+37850459 | Msa1018050:exon |
| AAAGCTGTTGTTGATCAAGC+TGG | 0.473890 | 7_1:+37845394 | Msa1018050:CDS |
| CTAGTATTGACAGCTGGAAA+AGG | 0.479829 | 7_1:+37850346 | Msa1018050:CDS |
| TATTTATCACTCTCTTCCTC+AGG | 0.482900 | 7_1:+37845438 | Msa1018050:CDS |
| AGAGCAGCATTACAAATAAG+AGG | 0.492972 | 7_1:-37850124 | None:intergenic |
| GGCCTTCTAGTATTGACAGC+TGG | 0.504403 | 7_1:+37850340 | Msa1018050:CDS |
| ACTTTAAGGGATGCGGTTGG+TGG | 0.507591 | 7_1:-37845145 | None:intergenic |
| AACATCTACTTTAAGGGATG+CGG | 0.507838 | 7_1:-37845152 | None:intergenic |
| AATGACACTTGCCAAACCTC+TGG | 0.510087 | 7_1:+37850009 | Msa1018050:CDS |
| CACCGATTGTGCTTGAGAAA+GGG | 0.511104 | 7_1:+37845272 | Msa1018050:CDS |
| AAAATCATAAACAACAATAG+AGG | 0.512169 | 7_1:-37850715 | None:intergenic |
| AGACGTGTCCGCAACACCAT+TGG | 0.530042 | 7_1:+37850297 | Msa1018050:CDS |
| GTGAAAGAGATTCGTGGTGT+GGG | 0.533958 | 7_1:+37850253 | Msa1018050:CDS |
| GAGTATTTGGATTGTAGTGG+TGG | 0.536009 | 7_1:+37845328 | Msa1018050:CDS |
| ACACTTGCCAAACCTCTGGC+TGG | 0.536713 | 7_1:+37850013 | Msa1018050:CDS |
| CCAGGCATAACAGGTTCAAA+AGG | 0.536762 | 7_1:-37848976 | None:intergenic |
| TGTTGTTTGCAGAAATATGG+TGG | 0.539814 | 7_1:-37845033 | None:intergenic |
| AAGTTGTCATGAAATAATCA+TGG | 0.541809 | 7_1:+37850507 | Msa1018050:three_prime_UTR |
| TGTAAAGTGTATGATGTTGA+AGG | 0.545867 | 7_1:+37845301 | Msa1018050:CDS |
| AGTTATTATTACACTTCAGA+TGG | 0.546215 | 7_1:-37850674 | None:intergenic |
| AGCATCTACCAATGGTGTTG+CGG | 0.547220 | 7_1:-37850305 | None:intergenic |
| TGAATTAACTCTACAGCGGC+CGG | 0.554420 | 7_1:-37849027 | None:intergenic |
| CGACATGTGAAAGAGATTCG+TGG | 0.557274 | 7_1:+37850247 | Msa1018050:CDS |
| TAGAACCTATCCAAGGAGAA+GGG | 0.557559 | 7_1:+37849076 | Msa1018050:CDS |
| CTTTAAGGGATGCGGTTGGT+GGG | 0.559069 | 7_1:-37845144 | None:intergenic |
| TACTCTACAAAGGTTACTCC+AGG | 0.559287 | 7_1:-37848994 | None:intergenic |
| TGTCAAAGCAAGTGCACCCA+GGG | 0.560401 | 7_1:-37848932 | None:intergenic |
| GACACTTCTTGTGTTTGATG+AGG | 0.562294 | 7_1:+37849161 | Msa1018050:CDS |
| AGGATTTCTTTGGGCTCACG+AGG | 0.564109 | 7_1:+37849964 | Msa1018050:CDS |
| GCTGTCAATGCACTTGGTCA+TGG | 0.564902 | 7_1:+37845355 | Msa1018050:CDS |
| GCATCCCTTAAAGTAGATGT+TGG | 0.569300 | 7_1:+37845154 | Msa1018050:CDS |
| AGAAACACACTTGTACTGAC+AGG | 0.571048 | 7_1:+37848857 | Msa1018050:CDS |
| TGAAGAAGCCAAGTACATAG+TGG | 0.571534 | 7_1:+37845234 | Msa1018050:CDS |
| GTAGAACCTATCCAAGGAGA+AGG | 0.575940 | 7_1:+37849075 | Msa1018050:CDS |
| GTGCACCCAGGGTTCTCCCA+TGG | 0.577473 | 7_1:-37848921 | None:intergenic |
| TTGCTTCCATGGGAGAACCC+TGG | 0.578747 | 7_1:+37848915 | Msa1018050:CDS |
| GGGATTGCTGTCAATGCACT+TGG | 0.579173 | 7_1:+37845349 | Msa1018050:CDS |
| GACTTTCTCGGTTACGAGGA+CGG | 0.580932 | 7_1:-37850053 | None:intergenic |
| GTTGGTGGGAGCAGTGATCG+AGG | 0.582595 | 7_1:-37845130 | None:intergenic |
| ACCAAACGCAATTGTAGAGG+AGG | 0.584557 | 7_1:+37845180 | Msa1018050:CDS |
| AATGAGTATTTGGATTGTAG+TGG | 0.589682 | 7_1:+37845325 | Msa1018050:CDS |
| TCGAGGGTAGTGAAGAATTG+GGG | 0.590529 | 7_1:-37845113 | None:intergenic |
| TGAAGTGTAATAATAACTGT+GGG | 0.595512 | 7_1:+37850679 | Msa1018050:three_prime_UTR |
| AAGCGACTTTCTCGGTTACG+AGG | 0.599730 | 7_1:-37850057 | None:intergenic |
| AAGCTGTTGTTGATCAAGCT+GGG | 0.600000 | 7_1:+37845395 | Msa1018050:CDS |
| CTGAAGTGTAATAATAACTG+TGG | 0.601140 | 7_1:+37850678 | Msa1018050:three_prime_UTR |
| ATTGTGCTTGAGAAAGGGAA+AGG | 0.601270 | 7_1:+37845277 | Msa1018050:CDS |
| TGCATTTCCATACTCTACAA+AGG | 0.611231 | 7_1:-37849004 | None:intergenic |
| TTGTCAAAGCAAGTGCACCC+AGG | 0.612655 | 7_1:-37848933 | None:intergenic |
| CTTGCCAAACCTCTGGCTGG+AGG | 0.616729 | 7_1:+37850016 | Msa1018050:CDS |
| GAAGAAGCCAAGTACATAGT+GGG | 0.622654 | 7_1:+37845235 | Msa1018050:CDS |
| TGTTCTGTTATAATCAATGG+TGG | 0.622795 | 7_1:-37850388 | None:intergenic |
| GAAATGCTTGTGATGAAACT+GGG | 0.625423 | 7_1:+37849139 | Msa1018050:CDS |
| AGAACCTATCCAAGGAGAAG+GGG | 0.627914 | 7_1:+37849077 | Msa1018050:CDS |
| TGTAGAGTATGGAAATGCAC+CGG | 0.628371 | 7_1:+37849008 | Msa1018050:CDS |
| GTTGTTTGCAGAAATATGGT+GGG | 0.629591 | 7_1:-37845032 | None:intergenic |
| AGCACCAAACGCAATTGTAG+AGG | 0.630346 | 7_1:+37845177 | Msa1018050:CDS |
| TTGGTGGGAGCAGTGATCGA+GGG | 0.633959 | 7_1:-37845129 | None:intergenic |
| GTAAAGTGTATGATGTTGAA+GGG | 0.636015 | 7_1:+37845302 | Msa1018050:CDS |
| TCTACTTTAAGGGATGCGGT+TGG | 0.636417 | 7_1:-37845148 | None:intergenic |
| CGAGGACGGCTCCAATAGGT+AGG | 0.637097 | 7_1:-37850039 | None:intergenic |
| TGTGAAAGAGATTCGTGGTG+TGG | 0.640546 | 7_1:+37850252 | Msa1018050:CDS |
| CCAAACGCAATTGTAGAGGA+GGG | 0.642147 | 7_1:+37845181 | Msa1018050:CDS |
| ATAGGTAGGCCTCCAGCCAG+AGG | 0.643211 | 7_1:-37850025 | None:intergenic |
| AGTATTTGGATTGTAGTGGT+GGG | 0.647378 | 7_1:+37845329 | Msa1018050:CDS |
| GCTATAAATTATGGTGACCA+CGG | 0.648498 | 7_1:+37850082 | Msa1018050:CDS |
| CACCTGCAAAAGTACTTCCG+TGG | 0.649852 | 7_1:-37850099 | None:intergenic |
| GTGTTCGTAGAACCTATCCA+AGG | 0.652622 | 7_1:+37849069 | Msa1018050:CDS |
| TTTCGGCAAGCATCTACCAA+TGG | 0.657642 | 7_1:-37850313 | None:intergenic |
| GAACCTATCCAAGGAGAAGG+GGG | 0.660995 | 7_1:+37849078 | Msa1018050:CDS |
| TGGCAAGTGTCATTATATCG+GGG | 0.674684 | 7_1:-37850000 | None:intergenic |
| GCTGTAGAGTTAATTCAGCA+GGG | 0.678091 | 7_1:+37849033 | Msa1018050:CDS |
| TGAAAGAGATTCGTGGTGTG+GGG | 0.698421 | 7_1:+37850254 | Msa1018050:CDS |
| CTGCTGAATTAACTCTACAG+CGG | 0.733302 | 7_1:-37849031 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTGTATAATAAATAAG+TGG | + | chr7_1:37850590-37850609 | Msa1018050:three_prime_UTR | 10.0% |
| !! | TCTTTAATAGTAGAAATAAA+GGG | + | chr7_1:37845544-37845563 | Msa1018050:intron | 15.0% |
| !!! | CTAAAAATCACTTTTTTTTT+TGG | - | chr7_1:37846028-37846047 | None:intergenic | 15.0% |
| !!! | CAAAAAAAAAAGTGATTTTT+AGG | + | chr7_1:37846026-37846045 | Msa1018050:intron | 15.0% |
| !! | ATTTGTTTCAATTAAGATAA+TGG | + | chr7_1:37846123-37846142 | Msa1018050:intron | 15.0% |
| !!! | GTCTATGTATAATTATTTTA+AGG | + | chr7_1:37846462-37846481 | Msa1018050:intron | 15.0% |
| !!! | TTTATTATTGGTTTAAATCA+AGG | + | chr7_1:37847670-37847689 | Msa1018050:intron | 15.0% |
| !! | GCTAAATATTTAATTAACTT+CGG | - | chr7_1:37847984-37848003 | None:intergenic | 15.0% |
| !!! | AATTTTTGTTCAGAAATTTT+AGG | + | chr7_1:37848449-37848468 | Msa1018050:intron | 15.0% |
| !!! | AATAAATAAAGGTATATTAG+TGG | - | chr7_1:37849651-37849670 | None:intergenic | 15.0% |
| !! | ATATTTGCAATTATTTCATT+TGG | + | chr7_1:37849871-37849890 | Msa1018050:intron | 15.0% |
| !!! | TCATTTATATATGATTTTGT+AGG | + | chr7_1:37849919-37849938 | Msa1018050:intron | 15.0% |
| !!! | ATTTTTTCCCTAATTTTTCA+GGG | + | chr7_1:37845478-37845497 | Msa1018050:intron | 20.0% |
| !! | TAAAAAACCCTGAAAAATTA+GGG | - | chr7_1:37845488-37845507 | None:intergenic | 20.0% |
| !! | GTCTTTAATAGTAGAAATAA+AGG | + | chr7_1:37845543-37845562 | Msa1018050:intron | 20.0% |
| !! | CTTTAATAGTAGAAATAAAG+GGG | + | chr7_1:37845545-37845564 | Msa1018050:intron | 20.0% |
| !! | TTTAGTGTAATTATATGTGT+CGG | + | chr7_1:37845786-37845805 | Msa1018050:intron | 20.0% |
| !!! | TGATTTTTAGGTATAATTTG+TGG | + | chr7_1:37846038-37846057 | Msa1018050:intron | 20.0% |
| !! | TTAGAAAGAAGTTTAATTGT+TGG | + | chr7_1:37846152-37846171 | Msa1018050:intron | 20.0% |
| !! | TAGAAAGAAGTTTAATTGTT+GGG | + | chr7_1:37846153-37846172 | Msa1018050:intron | 20.0% |
| !! | AGTTGTTTATTGTAGATAAT+TGG | + | chr7_1:37846186-37846205 | Msa1018050:intron | 20.0% |
| !!! | AATTATTTTAAGGTTAGCAA+TGG | + | chr7_1:37846472-37846491 | Msa1018050:intron | 20.0% |
| !!! | AGTATTATTTTACTGACTTT+TGG | + | chr7_1:37846576-37846595 | Msa1018050:intron | 20.0% |
| !!! | TTTACAAAAGTTTGATAATG+AGG | - | chr7_1:37846836-37846855 | None:intergenic | 20.0% |
| !! | ACAAATTATTGCTTCATAAT+TGG | - | chr7_1:37847031-37847050 | None:intergenic | 20.0% |
| !! | CATGTTATTATTTGATAAAG+CGG | + | chr7_1:37847554-37847573 | Msa1018050:intron | 20.0% |
| !! | AAATTGTCAAAAAAATAAGG+TGG | + | chr7_1:37848291-37848310 | Msa1018050:intron | 20.0% |
| !! | TTCTTTGTATTTCCATTTAT+TGG | + | chr7_1:37848535-37848554 | Msa1018050:intron | 20.0% |
| !!! | CTTATATTAAGTGTTGTTTA+AGG | - | chr7_1:37849801-37849820 | None:intergenic | 20.0% |
| !! | CTTAAACAACACTTAATATA+AGG | + | chr7_1:37849799-37849818 | Msa1018050:intron | 20.0% |
| !! | AGAACTACTAAAAAAGAAAT+TGG | + | chr7_1:37850216-37850235 | Msa1018050:CDS | 20.0% |
| !! | GAACTACTAAAAAAGAAATT+GGG | + | chr7_1:37850217-37850236 | Msa1018050:CDS | 20.0% |
| !!! | TTTCTCCTACTTTTAATTAT+TGG | - | chr7_1:37850467-37850486 | None:intergenic | 20.0% |
| !! | AAAATCATAAACAACAATAG+AGG | - | chr7_1:37850718-37850737 | None:intergenic | 20.0% |
| !!! | CTATTGTTGTTTATGATTTT+TGG | + | chr7_1:37850718-37850737 | Msa1018050:three_prime_UTR | 20.0% |
| !!! | CATTTTTTCCCTAATTTTTC+AGG | + | chr7_1:37845477-37845496 | Msa1018050:intron | 25.0% |
| ! | CTAAAAAACCCTGAAAAATT+AGG | - | chr7_1:37845489-37845508 | None:intergenic | 25.0% |
| !! | TGATTTTCTCAAATCATTAG+CGG | - | chr7_1:37845761-37845780 | None:intergenic | 25.0% |
| !!! | GTGAACTTTTTTAGAAAATC+AGG | + | chr7_1:37846384-37846403 | Msa1018050:intron | 25.0% |
| !! | TTACCTTAAAGTCTTTTTGA+AGG | + | chr7_1:37846600-37846619 | Msa1018050:intron | 25.0% |
| !! | GCGCTTAAATTTTGTTAAAA+AGG | + | chr7_1:37846642-37846661 | Msa1018050:intron | 25.0% |
| !!! | TTGTTAAAAAGGCGTTTAAA+AGG | + | chr7_1:37846653-37846672 | Msa1018050:intron | 25.0% |
| !! | TCACATTTAAAACTTGGAAA+AGG | - | chr7_1:37847146-37847165 | None:intergenic | 25.0% |
| !!! | TTTCCAAGTTTTAAATGTGA+TGG | + | chr7_1:37847146-37847165 | Msa1018050:intron | 25.0% |
| ! | TCATTATGATCATTGAAAGA+TGG | + | chr7_1:37847402-37847421 | Msa1018050:intron | 25.0% |
| !! | AGACATTGAAGCATTTAATA+TGG | + | chr7_1:37847455-37847474 | Msa1018050:intron | 25.0% |
| ! | CAATAATAAAGTGAGTGTTT+AGG | - | chr7_1:37847660-37847679 | None:intergenic | 25.0% |
| ! | CTAAACACTCACTTTATTAT+TGG | + | chr7_1:37847658-37847677 | Msa1018050:intron | 25.0% |
| !!! | ATTATTGGTTTAAATCAAGG+TGG | + | chr7_1:37847673-37847692 | Msa1018050:intron | 25.0% |
| !!! | TTATTGGTTTAAATCAAGGT+GGG | + | chr7_1:37847674-37847693 | Msa1018050:intron | 25.0% |
| !! | AATACGAAGCATTATTAGAA+GGG | - | chr7_1:37848043-37848062 | None:intergenic | 25.0% |
| ! | ATAATGCTTCGTATTGAATA+AGG | + | chr7_1:37848048-37848067 | Msa1018050:intron | 25.0% |
| !! | TAGAAGTTGGTTAATATGTT+GGG | + | chr7_1:37848213-37848232 | Msa1018050:intron | 25.0% |
| ! | GGGAAATTGTCAAAAAAATA+AGG | + | chr7_1:37848288-37848307 | Msa1018050:intron | 25.0% |
| !! | TTTTGTTCAGAAATTTTAGG+TGG | + | chr7_1:37848452-37848471 | Msa1018050:intron | 25.0% |
| ! | GAAATACAAAGAATGAAGTA+GGG | - | chr7_1:37848528-37848547 | None:intergenic | 25.0% |
| !!! | CTAGTTTTTCTTCCAATAAA+TGG | - | chr7_1:37848550-37848569 | None:intergenic | 25.0% |
| ! | ATTTGCAAAAAATACACGAT+CGG | - | chr7_1:37848788-37848807 | None:intergenic | 25.0% |
| ! | TTTCTGATGTACTTAATAGT+GGG | - | chr7_1:37849379-37849398 | None:intergenic | 25.0% |
| ! | ATTTCTGATGTACTTAATAG+TGG | - | chr7_1:37849380-37849399 | None:intergenic | 25.0% |
| ! | TAAGTACATCAGAAATTGAA+AGG | + | chr7_1:37849384-37849403 | Msa1018050:intron | 25.0% |
| ! | AAGTACATCAGAAATTGAAA+GGG | + | chr7_1:37849385-37849404 | Msa1018050:intron | 25.0% |
| ! | ACTTGAGACACAATAAATAA+AGG | - | chr7_1:37849662-37849681 | None:intergenic | 25.0% |
| ! | ATAGAAATTAGTACACTCAA+TGG | + | chr7_1:37849753-37849772 | Msa1018050:intron | 25.0% |
| ! | AACACACTTCAAAATTATGA+AGG | - | chr7_1:37849840-37849859 | None:intergenic | 25.0% |
| ! | AAGTTGTCATGAAATAATCA+TGG | + | chr7_1:37850507-37850526 | Msa1018050:three_prime_UTR | 25.0% |
| !!! | GTTTTAAGAATATTGTTGCA+AGG | + | chr7_1:37850557-37850576 | Msa1018050:three_prime_UTR | 25.0% |
| !! | TTTTATGTCAGAAATGCATA+TGG | + | chr7_1:37850643-37850662 | Msa1018050:three_prime_UTR | 25.0% |
| ! | AGTTATTATTACACTTCAGA+TGG | - | chr7_1:37850677-37850696 | None:intergenic | 25.0% |
| ! | TGAAGTGTAATAATAACTGT+GGG | + | chr7_1:37850679-37850698 | Msa1018050:three_prime_UTR | 25.0% |
| !! | TTGTGTTGTTTGCAGAAATA+TGG | - | chr7_1:37845039-37845058 | None:intergenic | 30.0% |
| ! | GTTGTTGTTGTTGTTGAAAT+GGG | - | chr7_1:37845083-37845102 | None:intergenic | 30.0% |
| ! | TGTTGTTGTTGTTGTTGAAA+TGG | - | chr7_1:37845084-37845103 | None:intergenic | 30.0% |
| TGTAAAGTGTATGATGTTGA+AGG | + | chr7_1:37845301-37845320 | Msa1018050:CDS | 30.0% | |
| GTAAAGTGTATGATGTTGAA+GGG | + | chr7_1:37845302-37845321 | Msa1018050:CDS | 30.0% | |
| AATGAGTATTTGGATTGTAG+TGG | + | chr7_1:37845325-37845344 | Msa1018050:CDS | 30.0% | |
| CATATAGTTATGATTACCTG+AGG | - | chr7_1:37845457-37845476 | None:intergenic | 30.0% | |
| ! | TGCTAGATTCTTTCTGTTTT+TGG | + | chr7_1:37845509-37845528 | Msa1018050:intron | 30.0% |
| AACCTTGCATATATTATGCA+AGG | - | chr7_1:37845609-37845628 | None:intergenic | 30.0% | |
| TGCATAATATATGCAAGGTT+CGG | + | chr7_1:37845609-37845628 | Msa1018050:intron | 30.0% | |
| TTACATTGACATGTATAGAC+TGG | + | chr7_1:37845685-37845704 | Msa1018050:intron | 30.0% | |
| ! | CCATTTTCTCAAAATGTTAC+AGG | - | chr7_1:37845877-37845896 | None:intergenic | 30.0% |
| !! | CCTGTAACATTTTGAGAAAA+TGG | + | chr7_1:37845874-37845893 | Msa1018050:intron | 30.0% |
| ! | TTTAGGTATAATTTGTGGTG+TGG | + | chr7_1:37846043-37846062 | Msa1018050:intron | 30.0% |
| ATATTTAGCGAACAGCAAAA+AGG | - | chr7_1:37846222-37846241 | None:intergenic | 30.0% | |
| TGAAAAAGTGAGAATGTGAT+GGG | + | chr7_1:37846318-37846337 | Msa1018050:intron | 30.0% | |
| AGAAAAAAGAAAGAGAGGAA+AGG | + | chr7_1:37846350-37846369 | Msa1018050:intron | 30.0% | |
| GAAAAAAGAAAGAGAGGAAA+GGG | + | chr7_1:37846351-37846370 | Msa1018050:intron | 30.0% | |
| ! | TTGTGTTGATACTAATTTGC+AGG | + | chr7_1:37846545-37846564 | Msa1018050:intron | 30.0% |
| ! | TGTGTTGATACTAATTTGCA+GGG | + | chr7_1:37846546-37846565 | Msa1018050:intron | 30.0% |
| GTTCCTTCAAAAAGACTTTA+AGG | - | chr7_1:37846606-37846625 | None:intergenic | 30.0% | |
| CTTGTAACTTCATACTCTTT+CGG | - | chr7_1:37846860-37846879 | None:intergenic | 30.0% | |
| TGTAATACTTTAGTAGTGAG+AGG | + | chr7_1:37846904-37846923 | Msa1018050:intron | 30.0% | |
| ! | ACGTAATTTGCACTATGTTT+GGG | - | chr7_1:37846939-37846958 | None:intergenic | 30.0% |
| ! | AACGTAATTTGCACTATGTT+TGG | - | chr7_1:37846940-37846959 | None:intergenic | 30.0% |
| TTCAACAGCATCAAATGTAA+TGG | - | chr7_1:37846995-37847014 | None:intergenic | 30.0% | |
| TCTCCAAAATTAGAACAATG+AGG | - | chr7_1:37847116-37847135 | None:intergenic | 30.0% | |
| ! | TGTCCATCACATTTAAAACT+TGG | - | chr7_1:37847152-37847171 | None:intergenic | 30.0% |
| AATCAGTGTATGCAATTATG+AGG | + | chr7_1:37847171-37847190 | Msa1018050:intron | 30.0% | |
| !! | CTGATTCCTTCTAAAATTAG+GGG | - | chr7_1:37847266-37847285 | None:intergenic | 30.0% |
| !! | GCTGATTCCTTCTAAAATTA+GGG | - | chr7_1:37847267-37847286 | None:intergenic | 30.0% |
| ATCATTGAAAGATGGTGATA+CGG | + | chr7_1:37847410-37847429 | Msa1018050:intron | 30.0% | |
| GTGTATAATCTCAAATGAAG+AGG | + | chr7_1:37847527-37847546 | Msa1018050:intron | 30.0% | |
| TATAATCTCAAATGAAGAGG+TGG | + | chr7_1:37847530-37847549 | Msa1018050:intron | 30.0% | |
| TTGTTTCAAGAAGGTTATTG+AGG | + | chr7_1:37847583-37847602 | Msa1018050:intron | 30.0% | |
| CATTACTCTTGATTGAATTC+TGG | + | chr7_1:37847807-37847826 | Msa1018050:intron | 30.0% | |
| AATTCTGGATGTCATAAGAA+TGG | + | chr7_1:37847822-37847841 | Msa1018050:intron | 30.0% | |
| TAAAGTATAGGTAGTGAAGT+AGG | + | chr7_1:37847872-37847891 | Msa1018050:intron | 30.0% | |
| !!! | TAGGTGTTTTGGTAAAGTAT+AGG | + | chr7_1:37847891-37847910 | Msa1018050:intron | 30.0% |
| TAAAGTATAGGTAGTGAAGT+AGG | + | chr7_1:37847872-37847891 | Msa1018050:intron | 30.0% | |
| GTGTATAGGTAGTAAAGTAT+AGG | + | chr7_1:37847925-37847944 | Msa1018050:intron | 30.0% | |
| TAAAGTATAGGTAGTGAAGT+AGG | + | chr7_1:37847872-37847891 | Msa1018050:intron | 30.0% | |
| ! | CAATACGAAGCATTATTAGA+AGG | - | chr7_1:37848044-37848063 | None:intergenic | 30.0% |
| GTCATCTCAATTTGACAAAA+AGG | - | chr7_1:37848108-37848127 | None:intergenic | 30.0% | |
| !! | GACCTAAAATTAACTTGCAT+TGG | - | chr7_1:37848166-37848185 | None:intergenic | 30.0% |
| ! | GTAGAAGTTGGTTAATATGT+TGG | + | chr7_1:37848212-37848231 | Msa1018050:intron | 30.0% |
| TTGGTTAATATGTTGGGTAA+GGG | + | chr7_1:37848219-37848238 | Msa1018050:intron | 30.0% | |
| TGTCAAAAAAATAAGGTGGA+AGG | + | chr7_1:37848295-37848314 | Msa1018050:intron | 30.0% | |
| GTCAAAAAAATAAGGTGGAA+GGG | + | chr7_1:37848296-37848315 | Msa1018050:intron | 30.0% | |
| TCAAAAAAATAAGGTGGAAG+GGG | + | chr7_1:37848297-37848316 | Msa1018050:intron | 30.0% | |
| GAAATTATCTTCTGTTCTGA+AGG | + | chr7_1:37848402-37848421 | Msa1018050:intron | 30.0% | |
| GGAAATACAAAGAATGAAGT+AGG | - | chr7_1:37848529-37848548 | None:intergenic | 30.0% | |
| ATTTCTCTGAGTTCATATCT+TGG | + | chr7_1:37848649-37848668 | Msa1018050:intron | 30.0% | |
| ! | AATTTGTTTAGAACTGATGC+AGG | + | chr7_1:37848726-37848745 | Msa1018050:intron | 30.0% |
| !!! | CGTGTATTTTTTGCAAATTC+TGG | + | chr7_1:37848790-37848809 | Msa1018050:CDS | 30.0% |
| !! | AGTGTGTTTCTGATATTTTC+TGG | - | chr7_1:37848848-37848867 | None:intergenic | 30.0% |
| AGACTGTAGAAATTCTTTAG+TGG | - | chr7_1:37849115-37849134 | None:intergenic | 30.0% | |
| ! | AAGTCTTTTATCTGCTTGAA+TGG | + | chr7_1:37849528-37849547 | Msa1018050:intron | 30.0% |
| TACCCTGTATTAATAGTACT+CGG | - | chr7_1:37849707-37849726 | None:intergenic | 30.0% | |
| ! | TTGGCTATCTTTCTTTTAAC+AGG | + | chr7_1:37849890-37849909 | Msa1018050:intron | 30.0% |
| ! | ATGATTTTGTAGGTTCAATG+TGG | + | chr7_1:37849929-37849948 | Msa1018050:intron | 30.0% |
| ! | TTTGGCAAGTGTCATTATAT+CGG | - | chr7_1:37850005-37850024 | None:intergenic | 30.0% |
| CTTTCTTTGATACATCAGAT+AGG | - | chr7_1:37850183-37850202 | None:intergenic | 30.0% | |
| CTATCTGATGTATCAAAGAA+AGG | + | chr7_1:37850181-37850200 | Msa1018050:CDS | 30.0% | |
| CTACTAAAAAAGAAATTGGG+CGG | + | chr7_1:37850220-37850239 | Msa1018050:CDS | 30.0% | |
| TGTTCTGTTATAATCAATGG+TGG | - | chr7_1:37850391-37850410 | None:intergenic | 30.0% | |
| ! | ACCATTGATTATAACAGAAC+AGG | + | chr7_1:37850390-37850409 | Msa1018050:CDS | 30.0% |
| TCCTGTTCTGTTATAATCAA+TGG | - | chr7_1:37850394-37850413 | None:intergenic | 30.0% | |
| ! | AAACCAAACTTTGCATGTTT+TGG | + | chr7_1:37850438-37850457 | Msa1018050:CDS | 30.0% |
| GGATGCCAATAATTAAAAGT+AGG | + | chr7_1:37850459-37850478 | Msa1018050:exon | 30.0% | |
| CTGAAGTGTAATAATAACTG+TGG | + | chr7_1:37850678-37850697 | Msa1018050:three_prime_UTR | 30.0% | |
| GTTGTTTGCAGAAATATGGT+GGG | - | chr7_1:37845035-37845054 | None:intergenic | 35.0% | |
| ! | TGTTGTTTGCAGAAATATGG+TGG | - | chr7_1:37845036-37845055 | None:intergenic | 35.0% |
| ! | AACATCTACTTTAAGGGATG+CGG | - | chr7_1:37845155-37845174 | None:intergenic | 35.0% |
| TGCTCCAACATCTACTTTAA+GGG | - | chr7_1:37845161-37845180 | None:intergenic | 35.0% | |
| ATAAGTACCCACTATGTACT+TGG | - | chr7_1:37845245-37845264 | None:intergenic | 35.0% | |
| TGTTGAAGGGAATGAGTATT+TGG | + | chr7_1:37845315-37845334 | Msa1018050:CDS | 35.0% | |
| AGTATTTGGATTGTAGTGGT+GGG | + | chr7_1:37845329-37845348 | Msa1018050:CDS | 35.0% | |
| TATTTATCACTCTCTTCCTC+AGG | + | chr7_1:37845438-37845457 | Msa1018050:CDS | 35.0% | |
| GACCTTGCATAATATATGCA+AGG | + | chr7_1:37845604-37845623 | Msa1018050:intron | 35.0% | |
| GCATAATATATGCAAGGTTC+GGG | + | chr7_1:37845610-37845629 | Msa1018050:intron | 35.0% | |
| CATAATATATGCAAGGTTCG+GGG | + | chr7_1:37845611-37845630 | Msa1018050:intron | 35.0% | |
| !!! | CTTCATCCTTTTTTTCTGGT+GGG | - | chr7_1:37845649-37845668 | None:intergenic | 35.0% |
| !!! | ACTTCATCCTTTTTTTCTGG+TGG | - | chr7_1:37845650-37845669 | None:intergenic | 35.0% |
| !!! | GGTACTTCATCCTTTTTTTC+TGG | - | chr7_1:37845653-37845672 | None:intergenic | 35.0% |
| ! | TCAATGTAAGTTTCGAGTGT+CGG | - | chr7_1:37845674-37845693 | None:intergenic | 35.0% |
| TAACCTATGAAGCATGGATA+TGG | + | chr7_1:37845708-37845727 | Msa1018050:intron | 35.0% | |
| ATGTTACAGGCTATAAAGCA+CGG | - | chr7_1:37845864-37845883 | None:intergenic | 35.0% | |
| ! | TGCATGCCTCAATTTTGTAT+TGG | + | chr7_1:37845914-37845933 | Msa1018050:intron | 35.0% |
| CCAACACCAATACAAAATTG+AGG | - | chr7_1:37845923-37845942 | None:intergenic | 35.0% | |
| !! | CCTCAATTTTGTATTGGTGT+TGG | + | chr7_1:37845920-37845939 | Msa1018050:intron | 35.0% |
| ! | ATAATTTGTGGTGTGGTGTT+TGG | + | chr7_1:37846050-37846069 | Msa1018050:intron | 35.0% |
| ! | TAATTTGTGGTGTGGTGTTT+GGG | + | chr7_1:37846051-37846070 | Msa1018050:intron | 35.0% |
| TGTAGGAAAGAGAGATAGAA+AGG | + | chr7_1:37846278-37846297 | Msa1018050:intron | 35.0% | |
| GTAGGAAAGAGAGATAGAAA+GGG | + | chr7_1:37846279-37846298 | Msa1018050:intron | 35.0% | |
| GTGAAAAAGTGAGAATGTGA+TGG | + | chr7_1:37846317-37846336 | Msa1018050:intron | 35.0% | |
| GTGGTAGAAAAAAGAAAGAG+AGG | + | chr7_1:37846345-37846364 | Msa1018050:intron | 35.0% | |
| TAGACTTGAGTGATTGAACA+TGG | + | chr7_1:37846710-37846729 | Msa1018050:intron | 35.0% | |
| ! | ACTTGTTTAAAGTCAGAGTG+TGG | - | chr7_1:37846965-37846984 | None:intergenic | 35.0% |
| ACAATCAGCGTATGCTATTA+TGG | + | chr7_1:37847080-37847099 | Msa1018050:intron | 35.0% | |
| CAATCAGCGTATGCTATTAT+GGG | + | chr7_1:37847081-37847100 | Msa1018050:intron | 35.0% | |
| AATCAGCGTATGCTATTATG+GGG | + | chr7_1:37847082-37847101 | Msa1018050:intron | 35.0% | |
| ! | GTGCCTCATTGTTCTAATTT+TGG | + | chr7_1:37847110-37847129 | Msa1018050:intron | 35.0% |
| CTAACAGCAGCATATACTTA+GGG | - | chr7_1:37847206-37847225 | None:intergenic | 35.0% | |
| TCTAACAGCAGCATATACTT+AGG | - | chr7_1:37847207-37847226 | None:intergenic | 35.0% | |
| TTGAGCTCTACCATCATAAA+GGG | - | chr7_1:37847242-37847261 | None:intergenic | 35.0% | |
| ATTGAGCTCTACCATCATAA+AGG | - | chr7_1:37847243-37847262 | None:intergenic | 35.0% | |
| ! | CTCAATCCCCTAATTTTAGA+AGG | + | chr7_1:37847257-37847276 | Msa1018050:intron | 35.0% |
| !! | GGCTGATTCCTTCTAAAATT+AGG | - | chr7_1:37847268-37847287 | None:intergenic | 35.0% |
| ! | GCATTTAATATGGTTTGCAG+AGG | + | chr7_1:37847465-37847484 | Msa1018050:intron | 35.0% |
| GAAATAGGTTCCACTTAAAG+TGG | + | chr7_1:37847709-37847728 | Msa1018050:intron | 35.0% | |
| TCTAACACTCACTCTCTTAT+TGG | - | chr7_1:37847756-37847775 | None:intergenic | 35.0% | |
| AATCAAGAGTAATGCTACTG+GGG | - | chr7_1:37847801-37847820 | None:intergenic | 35.0% | |
| CAATCAAGAGTAATGCTACT+GGG | - | chr7_1:37847802-37847821 | None:intergenic | 35.0% | |
| TCAATCAAGAGTAATGCTAC+TGG | - | chr7_1:37847803-37847822 | None:intergenic | 35.0% | |
| TAGTGAAGTAGGTGAAGTAT+AGG | + | chr7_1:37847948-37847967 | Msa1018050:intron | 35.0% | |
| ! | CGCCAATGCAAGTTAATTTT+AGG | + | chr7_1:37848161-37848180 | Msa1018050:intron | 35.0% |
| ATGAACAAAGAAGCGAGTTT+CGG | - | chr7_1:37848188-37848207 | None:intergenic | 35.0% | |
| AAACTCGCTTCTTTGTTCAT+TGG | + | chr7_1:37848188-37848207 | Msa1018050:intron | 35.0% | |
| AACTCGCTTCTTTGTTCATT+GGG | + | chr7_1:37848189-37848208 | Msa1018050:intron | 35.0% | |
| GTTGGTTAATATGTTGGGTA+AGG | + | chr7_1:37848218-37848237 | Msa1018050:intron | 35.0% | |
| ! | GGTACTTTTAGATAGACCTA+TGG | + | chr7_1:37848248-37848267 | Msa1018050:intron | 35.0% |
| TTCCATCTTCTTTGTACCAT+AGG | - | chr7_1:37848267-37848286 | None:intergenic | 35.0% | |
| TATGGTACAAAGAAGATGGA+AGG | + | chr7_1:37848266-37848285 | Msa1018050:intron | 35.0% | |
| ATGGTACAAAGAAGATGGAA+GGG | + | chr7_1:37848267-37848286 | Msa1018050:intron | 35.0% | |
| TTAGCTGCCTCTGTAAAATA+TGG | + | chr7_1:37848330-37848349 | Msa1018050:intron | 35.0% | |
| ! | TGCTTCTCCATATTTTACAG+AGG | - | chr7_1:37848340-37848359 | None:intergenic | 35.0% |
| GAAGTAGGGATAACAAAACT+TGG | - | chr7_1:37848514-37848533 | None:intergenic | 35.0% | |
| TTGGAAGAAAAACTAGAGTG+CGG | + | chr7_1:37848554-37848573 | Msa1018050:intron | 35.0% | |
| AAAAACTAGAGTGCGGAAAA+AGG | + | chr7_1:37848561-37848580 | Msa1018050:intron | 35.0% | |
| AAAGCTAAAAACTCAGTAGC+TGG | - | chr7_1:37848889-37848908 | None:intergenic | 35.0% | |
| ! | CTTTTAGCAATTGCTTCCAT+GGG | + | chr7_1:37848905-37848924 | Msa1018050:CDS | 35.0% |
| TGCATTTCCATACTCTACAA+AGG | - | chr7_1:37849007-37849026 | None:intergenic | 35.0% | |
| GAAATGCTTGTGATGAAACT+GGG | + | chr7_1:37849139-37849158 | Msa1018050:CDS | 35.0% | |
| AGGTATGCACTATCTAATCT+TGG | + | chr7_1:37849181-37849200 | Msa1018050:intron | 35.0% | |
| CACTATCTAATCTTGGTATC+CGG | + | chr7_1:37849188-37849207 | Msa1018050:intron | 35.0% | |
| GACATGATGAACTCATTTAC+TGG | - | chr7_1:37849227-37849246 | None:intergenic | 35.0% | |
| AAGCAGATAAAAGACTTGAG+TGG | - | chr7_1:37849525-37849544 | None:intergenic | 35.0% | |
| ACACCGAGTACTATTAATAC+AGG | + | chr7_1:37849701-37849720 | Msa1018050:intron | 35.0% | |
| CACCGAGTACTATTAATACA+GGG | + | chr7_1:37849702-37849721 | Msa1018050:intron | 35.0% | |
| TTGTAGGTTCAATGTGGTTT+AGG | + | chr7_1:37849935-37849954 | Msa1018050:intron | 35.0% | |
| TAGGTAGATCAGGATTTCTT+TGG | + | chr7_1:37849954-37849973 | Msa1018050:CDS | 35.0% | |
| AGGTAGATCAGGATTTCTTT+GGG | + | chr7_1:37849955-37849974 | Msa1018050:CDS | 35.0% | |
| ! | TTGGCAAGTGTCATTATATC+GGG | - | chr7_1:37850004-37850023 | None:intergenic | 35.0% |
| GTCGCTTCTGCTATAAATTA+TGG | + | chr7_1:37850073-37850092 | Msa1018050:CDS | 35.0% | |
| GCTATAAATTATGGTGACCA+CGG | + | chr7_1:37850082-37850101 | Msa1018050:CDS | 35.0% | |
| AGAGCAGCATTACAAATAAG+AGG | - | chr7_1:37850127-37850146 | None:intergenic | 35.0% | |
| GATACATCAGATAGGAAAGT+AGG | - | chr7_1:37850175-37850194 | None:intergenic | 35.0% | |
| ATACTAGAAGGCCAGAATTT+CGG | - | chr7_1:37850333-37850352 | None:intergenic | 35.0% | |
| CTGGAAAAGGTAATGTTGTT+AGG | + | chr7_1:37850359-37850378 | Msa1018050:CDS | 35.0% | |
| CATCCAAAACATGCAAAGTT+TGG | - | chr7_1:37850444-37850463 | None:intergenic | 35.0% | |
| AAAGATGCTTTCTTTCTTGC+TGG | + | chr7_1:37850484-37850503 | Msa1018050:three_prime_UTR | 35.0% | |
| !! | GAAATGGGTGAGTTTGTTGT+TGG | - | chr7_1:37845068-37845087 | None:intergenic | 40.0% |
| ATCGAGGGTAGTGAAGAATT+GGG | - | chr7_1:37845117-37845136 | None:intergenic | 40.0% | |
| GCATCCCTTAAAGTAGATGT+TGG | + | chr7_1:37845154-37845173 | Msa1018050:CDS | 40.0% | |
| GTGCTCCAACATCTACTTTA+AGG | - | chr7_1:37845162-37845181 | None:intergenic | 40.0% | |
| CAGTGTGAAGAAGACTAAAG+AGG | + | chr7_1:37845204-37845223 | Msa1018050:intron | 40.0% | |
| TGAAGAAGCCAAGTACATAG+TGG | + | chr7_1:37845234-37845253 | Msa1018050:CDS | 40.0% | |
| GAAGAAGCCAAGTACATAGT+GGG | + | chr7_1:37845235-37845254 | Msa1018050:CDS | 40.0% | |
| TTCCCTTTCTCAAGCACAAT+CGG | - | chr7_1:37845277-37845296 | None:intergenic | 40.0% | |
| ATTGTGCTTGAGAAAGGGAA+AGG | + | chr7_1:37845277-37845296 | Msa1018050:CDS | 40.0% | |
| GAGTATTTGGATTGTAGTGG+TGG | + | chr7_1:37845328-37845347 | Msa1018050:CDS | 40.0% | |
| ! | TTGGTCATGGTGATGATGAT+TGG | + | chr7_1:37845368-37845387 | Msa1018050:CDS | 40.0% |
| AAAGCTGTTGTTGATCAAGC+TGG | + | chr7_1:37845394-37845413 | Msa1018050:CDS | 40.0% | |
| AAGCTGTTGTTGATCAAGCT+GGG | + | chr7_1:37845395-37845414 | Msa1018050:CDS | 40.0% | |
| TGTCCATATCCATGCTTCAT+AGG | - | chr7_1:37845714-37845733 | None:intergenic | 40.0% | |
| ! | GTAATTATATGTGTCGGCGT+CGG | + | chr7_1:37845792-37845811 | Msa1018050:intron | 40.0% |
| ACACTCATAGTGTTAGACAC+TGG | + | chr7_1:37845943-37845962 | Msa1018050:intron | 40.0% | |
| TGAATCTCTCACAACTCTAG+TGG | + | chr7_1:37846248-37846267 | Msa1018050:intron | 40.0% | |
| GAATCTCTCACAACTCTAGT+GGG | + | chr7_1:37846249-37846268 | Msa1018050:intron | 40.0% | |
| AATCTCTCACAACTCTAGTG+GGG | + | chr7_1:37846250-37846269 | Msa1018050:intron | 40.0% | |
| ACACAAGATGCTGTCTAAAG+AGG | - | chr7_1:37846531-37846550 | None:intergenic | 40.0% | |
| !! | GAACATGGTTCTAAAACTGC+TGG | + | chr7_1:37846725-37846744 | Msa1018050:intron | 40.0% |
| TTGTCTTCACTCAGAAGCTA+TGG | - | chr7_1:37846755-37846774 | None:intergenic | 40.0% | |
| ATTTGCTCTGCAGTGAAACT+CGG | + | chr7_1:37846802-37846821 | Msa1018050:intron | 40.0% | |
| ATTGCTTCATAATTGGACCC+TGG | - | chr7_1:37847024-37847043 | None:intergenic | 40.0% | |
| GTATGTGAAGCCCTTTATGA+TGG | + | chr7_1:37847229-37847248 | Msa1018050:intron | 40.0% | |
| GAATCAGCCAATGTTAAGTG+TGG | + | chr7_1:37847279-37847298 | Msa1018050:intron | 40.0% | |
| TGATGCTCCACACTTAACAT+TGG | - | chr7_1:37847289-37847308 | None:intergenic | 40.0% | |
| AGATTCATTGCAGGTACATG+TGG | + | chr7_1:37847310-37847329 | Msa1018050:intron | 40.0% | |
| TAGAGTTGTACATCCGCATA+TGG | + | chr7_1:37847336-37847355 | Msa1018050:intron | 40.0% | |
| ATATTGACCTTCGAGAACTC+TGG | - | chr7_1:37847494-37847513 | None:intergenic | 40.0% | |
| !! | CGGACTGATTTGTTTCAAGA+AGG | + | chr7_1:37847574-37847593 | Msa1018050:intron | 40.0% |
| ATAGGTTCCACTTAAAGTGG+TGG | + | chr7_1:37847712-37847731 | Msa1018050:intron | 40.0% | |
| TAGGTTCCACTTAAAGTGGT+GGG | + | chr7_1:37847713-37847732 | Msa1018050:intron | 40.0% | |
| GGATGTCATAAGAATGGTTG+AGG | + | chr7_1:37847828-37847847 | Msa1018050:intron | 40.0% | |
| GTCATAAGAATGGTTGAGGA+AGG | + | chr7_1:37847832-37847851 | Msa1018050:intron | 40.0% | |
| CGATGTCGATGGTAAAGTAT+AGG | + | chr7_1:37847860-37847879 | Msa1018050:intron | 40.0% | |
| ! | AGGTAGTGAAGTAGGTGTTT+TGG | + | chr7_1:37847880-37847899 | Msa1018050:intron | 40.0% |
| AGGTAGTGAAGTAGGTGTAT+AGG | + | chr7_1:37847911-37847930 | Msa1018050:intron | 40.0% | |
| ! | AATTTTCCCTTGTCCACATG+CGG | + | chr7_1:37848071-37848090 | Msa1018050:intron | 40.0% |
| TGTATAGAACTTTCTCCGCT+GGG | - | chr7_1:37848131-37848150 | None:intergenic | 40.0% | |
| ATGTATAGAACTTTCTCCGC+TGG | - | chr7_1:37848132-37848151 | None:intergenic | 40.0% | |
| ACTCGCTTCTTTGTTCATTG+GGG | + | chr7_1:37848190-37848209 | Msa1018050:intron | 40.0% | |
| TTGTTCATTGGGGTAGAAGT+TGG | + | chr7_1:37848200-37848219 | Msa1018050:intron | 40.0% | |
| TATGTTGGGTAAGGGTGATA+AGG | + | chr7_1:37848227-37848246 | Msa1018050:intron | 40.0% | |
| GACCTATGGTACAAAGAAGA+TGG | + | chr7_1:37848262-37848281 | Msa1018050:intron | 40.0% | |
| TGGTACAAAGAAGATGGAAG+GGG | + | chr7_1:37848268-37848287 | Msa1018050:intron | 40.0% | |
| GAACCACGGAGATTCTTAAT+AGG | - | chr7_1:37848587-37848606 | None:intergenic | 40.0% | |
| ATGAAAGCTGCATAGAACCA+CGG | - | chr7_1:37848601-37848620 | None:intergenic | 40.0% | |
| ! | AGAAACACACTTGTACTGAC+AGG | + | chr7_1:37848857-37848876 | Msa1018050:CDS | 40.0% |
| ! | GCTTTTAGCAATTGCTTCCA+TGG | + | chr7_1:37848904-37848923 | Msa1018050:CDS | 40.0% |
| TACTCTACAAAGGTTACTCC+AGG | - | chr7_1:37848997-37849016 | None:intergenic | 40.0% | |
| GGAGTAACCTTTGTAGAGTA+TGG | + | chr7_1:37848997-37849016 | Msa1018050:CDS | 40.0% | |
| TGTAGAGTATGGAAATGCAC+CGG | + | chr7_1:37849008-37849027 | Msa1018050:CDS | 40.0% | |
| CTGCTGAATTAACTCTACAG+CGG | - | chr7_1:37849034-37849053 | None:intergenic | 40.0% | |
| GCTGTAGAGTTAATTCAGCA+GGG | + | chr7_1:37849033-37849052 | Msa1018050:CDS | 40.0% | |
| TAGAACCTATCCAAGGAGAA+GGG | + | chr7_1:37849076-37849095 | Msa1018050:CDS | 40.0% | |
| CGAAATGCTTGTGATGAAAC+TGG | + | chr7_1:37849138-37849157 | Msa1018050:CDS | 40.0% | |
| GACACTTCTTGTGTTTGATG+AGG | + | chr7_1:37849161-37849180 | Msa1018050:CDS | 40.0% | |
| TCTGCATATGTAACCAAAGC+AGG | + | chr7_1:37849280-37849299 | Msa1018050:intron | 40.0% | |
| CAATGTGGTTTAGGTAGATC+AGG | + | chr7_1:37849944-37849963 | Msa1018050:CDS | 40.0% | |
| ! | TGGCAAGTGTCATTATATCG+GGG | - | chr7_1:37850003-37850022 | None:intergenic | 40.0% |
| TATAGCAGAAGCGACTTTCT+CGG | - | chr7_1:37850068-37850087 | None:intergenic | 40.0% | |
| TTCCAGCTGTCAATACTAGA+AGG | - | chr7_1:37850345-37850364 | None:intergenic | 40.0% | |
| !! | CTAGTATTGACAGCTGGAAA+AGG | + | chr7_1:37850346-37850365 | Msa1018050:CDS | 40.0% |
| TCGAGGGTAGTGAAGAATTG+GGG | - | chr7_1:37845116-37845135 | None:intergenic | 45.0% | |
| GATCGAGGGTAGTGAAGAAT+TGG | - | chr7_1:37845118-37845137 | None:intergenic | 45.0% | |
| ! | TCTACTTTAAGGGATGCGGT+TGG | - | chr7_1:37845151-37845170 | None:intergenic | 45.0% |
| AGCACCAAACGCAATTGTAG+AGG | + | chr7_1:37845177-37845196 | Msa1018050:CDS | 45.0% | |
| ACCAAACGCAATTGTAGAGG+AGG | + | chr7_1:37845180-37845199 | Msa1018050:CDS | 45.0% | |
| CCAAACGCAATTGTAGAGGA+GGG | + | chr7_1:37845181-37845200 | Msa1018050:CDS | 45.0% | |
| ! | CACCGATTGTGCTTGAGAAA+GGG | + | chr7_1:37845272-37845291 | Msa1018050:CDS | 45.0% |
| GACTGGTAACCTATGAAGCA+TGG | + | chr7_1:37845702-37845721 | Msa1018050:intron | 45.0% | |
| TATAAAGCACGGACACTCCT+CGG | - | chr7_1:37845853-37845872 | None:intergenic | 45.0% | |
| !! | TGAGAATGTGATGGGTCATG+TGG | + | chr7_1:37846326-37846345 | Msa1018050:intron | 45.0% |
| AAGGTTAGCAATGGTATGCG+TGG | + | chr7_1:37846481-37846500 | Msa1018050:intron | 45.0% | |
| TTAGCAATGGTATGCGTGGT+TGG | + | chr7_1:37846485-37846504 | Msa1018050:intron | 45.0% | |
| AATGGTATGCGTGGTTGGAA+AGG | + | chr7_1:37846490-37846509 | Msa1018050:intron | 45.0% | |
| ATGGTATGCGTGGTTGGAAA+GGG | + | chr7_1:37846491-37846510 | Msa1018050:intron | 45.0% | |
| GAGTTTCACTGCAGAGCAAA+TGG | - | chr7_1:37846803-37846822 | None:intergenic | 45.0% | |
| ATGCTGTTGAAAGAGAGCCA+GGG | + | chr7_1:37847004-37847023 | Msa1018050:intron | 45.0% | |
| GAGCATCAGAGATTCATTGC+AGG | + | chr7_1:37847301-37847320 | Msa1018050:intron | 45.0% | |
| AAACCGTGTCTCTGTTCACA+TGG | + | chr7_1:37847360-37847379 | Msa1018050:intron | 45.0% | |
| CATCCATGTGAACAGAGACA+CGG | - | chr7_1:37847366-37847385 | None:intergenic | 45.0% | |
| GGGTCTCACACATTGGAAAT+AGG | + | chr7_1:37847694-37847713 | Msa1018050:intron | 45.0% | |
| GTATGTCCCACCACTTTAAG+TGG | - | chr7_1:37847722-37847741 | None:intergenic | 45.0% | |
| !! | GGAAGGTATTTCGATGTCGA+TGG | + | chr7_1:37847849-37847868 | Msa1018050:intron | 45.0% |
| TCAAATTGAGATGACCCCAG+CGG | + | chr7_1:37848113-37848132 | Msa1018050:intron | 45.0% | |
| GTATAGAACTTTCTCCGCTG+GGG | - | chr7_1:37848130-37848149 | None:intergenic | 45.0% | |
| AGGCCTATTAAGAATCTCCG+TGG | + | chr7_1:37848581-37848600 | Msa1018050:intron | 45.0% | |
| CCAGGCATAACAGGTTCAAA+AGG | - | chr7_1:37848979-37848998 | None:intergenic | 45.0% | |
| ! | CCTTTTGAACCTGTTATGCC+TGG | + | chr7_1:37848976-37848995 | Msa1018050:CDS | 45.0% |
| AAGGTTACTCCAGGCATAAC+AGG | - | chr7_1:37848988-37849007 | None:intergenic | 45.0% | |
| TGAATTAACTCTACAGCGGC+CGG | - | chr7_1:37849030-37849049 | None:intergenic | 45.0% | |
| CGCTGTAGAGTTAATTCAGC+AGG | + | chr7_1:37849032-37849051 | Msa1018050:CDS | 45.0% | |
| GTGTTCGTAGAACCTATCCA+AGG | + | chr7_1:37849069-37849088 | Msa1018050:CDS | 45.0% | |
| GTAGAACCTATCCAAGGAGA+AGG | + | chr7_1:37849075-37849094 | Msa1018050:CDS | 45.0% | |
| AGAACCTATCCAAGGAGAAG+GGG | + | chr7_1:37849077-37849096 | Msa1018050:CDS | 45.0% | |
| TGTATATTCCCCCTTCTCCT+TGG | - | chr7_1:37849089-37849108 | None:intergenic | 45.0% | |
| TACTGGCATACGAGTACAAC+CGG | - | chr7_1:37849210-37849229 | None:intergenic | 45.0% | |
| ! | CCTTTGTTGTATGCCTGCTT+TGG | - | chr7_1:37849296-37849315 | None:intergenic | 45.0% |
| CCAAAGCAGGCATACAACAA+AGG | + | chr7_1:37849293-37849312 | Msa1018050:intron | 45.0% | |
| CGACATGTGAAAGAGATTCG+TGG | + | chr7_1:37850247-37850266 | Msa1018050:CDS | 45.0% | |
| TGTGAAAGAGATTCGTGGTG+TGG | + | chr7_1:37850252-37850271 | Msa1018050:CDS | 45.0% | |
| GTGAAAGAGATTCGTGGTGT+GGG | + | chr7_1:37850253-37850272 | Msa1018050:CDS | 45.0% | |
| TGAAAGAGATTCGTGGTGTG+GGG | + | chr7_1:37850254-37850273 | Msa1018050:CDS | 45.0% | |
| ! | AGCATCTACCAATGGTGTTG+CGG | - | chr7_1:37850308-37850327 | None:intergenic | 45.0% |
| TTTCGGCAAGCATCTACCAA+TGG | - | chr7_1:37850316-37850335 | None:intergenic | 45.0% | |
| GTAGATGCTTGCCGAAATTC+TGG | + | chr7_1:37850319-37850338 | Msa1018050:CDS | 45.0% | |
| ! | CTTTAAGGGATGCGGTTGGT+GGG | - | chr7_1:37845147-37845166 | None:intergenic | 50.0% |
| ! | ACTTTAAGGGATGCGGTTGG+TGG | - | chr7_1:37845148-37845167 | None:intergenic | 50.0% |
| CCCTCCTCTACAATTGCGTT+TGG | - | chr7_1:37845184-37845203 | None:intergenic | 50.0% | |
| !! | GCACCGATTGTGCTTGAGAA+AGG | + | chr7_1:37845271-37845290 | Msa1018050:CDS | 50.0% |
| GGGATTGCTGTCAATGCACT+TGG | + | chr7_1:37845349-37845368 | Msa1018050:CDS | 50.0% | |
| GCTGTCAATGCACTTGGTCA+TGG | + | chr7_1:37845355-37845374 | Msa1018050:CDS | 50.0% | |
| AAGGTTCGGGGTTCAAACCT+CGG | + | chr7_1:37845623-37845642 | Msa1018050:intron | 50.0% | |
| GCATGGATATGGACACCACA+CGG | + | chr7_1:37845719-37845738 | Msa1018050:intron | 50.0% | |
| TTTGTGGTGTGGTGTTTGGG+TGG | + | chr7_1:37846054-37846073 | Msa1018050:intron | 50.0% | |
| ACTCTAGTGGGGAGTAGTGT+AGG | + | chr7_1:37846261-37846280 | Msa1018050:intron | 50.0% | |
| GAAAGAGAGGAAAGGGAGAG+TGG | + | chr7_1:37846358-37846377 | Msa1018050:intron | 50.0% | |
| GATGCTGTTGAAAGAGAGCC+AGG | + | chr7_1:37847003-37847022 | Msa1018050:intron | 50.0% | |
| GAGACACGGTTTGCCATATG+CGG | - | chr7_1:37847352-37847371 | None:intergenic | 50.0% | |
| TCAAGGTGGGTCTCACACAT+TGG | + | chr7_1:37847687-37847706 | Msa1018050:intron | 50.0% | |
| ! | GCTTTTCCGCATGTGGACAA+GGG | - | chr7_1:37848080-37848099 | None:intergenic | 50.0% |
| ! | TGCTTTTCCGCATGTGGACA+AGG | - | chr7_1:37848081-37848100 | None:intergenic | 50.0% |
| TGTCAAAGCAAGTGCACCCA+GGG | - | chr7_1:37848935-37848954 | None:intergenic | 50.0% | |
| TTGTCAAAGCAAGTGCACCC+AGG | - | chr7_1:37848936-37848955 | None:intergenic | 50.0% | |
| GAACCTATCCAAGGAGAAGG+GGG | + | chr7_1:37849078-37849097 | Msa1018050:CDS | 50.0% | |
| ATTCCCCCTTCTCCTTGGAT+AGG | - | chr7_1:37849084-37849103 | None:intergenic | 50.0% | |
| AGGATTTCTTTGGGCTCACG+AGG | + | chr7_1:37849964-37849983 | Msa1018050:CDS | 50.0% | |
| GACTTTCTCGGTTACGAGGA+CGG | - | chr7_1:37850056-37850075 | None:intergenic | 50.0% | |
| AAGCGACTTTCTCGGTTACG+AGG | - | chr7_1:37850060-37850079 | None:intergenic | 50.0% | |
| !!! | GACCACGGAAGTACTTTTGC+AGG | + | chr7_1:37850097-37850116 | Msa1018050:CDS | 50.0% |
| !! | CACCTGCAAAAGTACTTCCG+TGG | - | chr7_1:37850102-37850121 | None:intergenic | 50.0% |
| !!! | CACGGAAGTACTTTTGCAGG+TGG | + | chr7_1:37850100-37850119 | Msa1018050:CDS | 50.0% |
| CGTGGTGTGGGGCTAATTAT+AGG | + | chr7_1:37850265-37850284 | Msa1018050:CDS | 50.0% | |
| !! | GGCCTTCTAGTATTGACAGC+TGG | + | chr7_1:37850340-37850359 | Msa1018050:CDS | 50.0% |
| TTGGTGGGAGCAGTGATCGA+GGG | - | chr7_1:37845132-37845151 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr7_1:37845582-37845601 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr7_1:37845579-37845598 | Msa1018050:intron | 55.0% | |
| CGTGAGCTTAGCTCAGTTGG+AGG | + | chr7_1:37845582-37845601 | Msa1018050:intron | 55.0% | |
| !!! | CCTTTTTTTCTGGTGGGCCG+AGG | - | chr7_1:37845643-37845662 | None:intergenic | 55.0% |
| CCTCGGCCCACCAGAAAAAA+AGG | + | chr7_1:37845640-37845659 | Msa1018050:intron | 55.0% | |
| GACTAGGCGTGTCTCGTTGT+CGG | - | chr7_1:37845831-37845850 | None:intergenic | 55.0% | |
| GAGGTCTCCAGAGTTCTCGA+AGG | + | chr7_1:37847484-37847503 | Msa1018050:intron | 55.0% | |
| !! | GGTGTCTGCTTTTCCGCATG+TGG | - | chr7_1:37848087-37848106 | None:intergenic | 55.0% |
| TTGCTTCCATGGGAGAACCC+TGG | + | chr7_1:37848915-37848934 | Msa1018050:CDS | 55.0% | |
| TGCTTCCATGGGAGAACCCT+GGG | + | chr7_1:37848916-37848935 | Msa1018050:CDS | 55.0% | |
| ! | CTTTGGGCTCACGAGGCTTT+TGG | + | chr7_1:37849971-37849990 | Msa1018050:CDS | 55.0% |
| GTTACGAGGACGGCTCCAAT+AGG | - | chr7_1:37850046-37850065 | None:intergenic | 55.0% | |
| AGACGTGTCCGCAACACCAT+TGG | + | chr7_1:37850297-37850316 | Msa1018050:CDS | 55.0% | |
| ! | GTTGGTGGGAGCAGTGATCG+AGG | - | chr7_1:37845133-37845152 | None:intergenic | 60.0% |
| GTCGCGTGTTAGTGTCCGTG+TGG | - | chr7_1:37845737-37845756 | None:intergenic | 60.0% | |
| AACGAGACACGCCTAGTCCG+AGG | + | chr7_1:37845833-37845852 | Msa1018050:intron | 60.0% | |
| ATAGGTAGGCCTCCAGCCAG+AGG | - | chr7_1:37850028-37850047 | None:intergenic | 60.0% | |
| CTGGCTGGAGGCCTACCTAT+TGG | + | chr7_1:37850028-37850047 | Msa1018050:CDS | 60.0% | |
| CGAGGACGGCTCCAATAGGT+AGG | - | chr7_1:37850042-37850061 | None:intergenic | 60.0% | |
| GCACGGACACTCCTCGGACT+AGG | - | chr7_1:37845847-37845866 | None:intergenic | 65.0% | |
| GTGCACCCAGGGTTCTCCCA+TGG | - | chr7_1:37848924-37848943 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 37845025 | 37850755 | 37845025 | ID=Msa1018050;Name=Msa1018050 |
| chr7_1 | mRNA | 37845025 | 37850755 | 37845025 | ID=Msa1018050-mRNA-1;Parent=Msa1018050;Name=Msa1018050-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.5|0.2|1|0.25|0.2|5|281|459 |
| chr7_1 | exon | 37845025 | 37845207 | 37845025 | ID=Msa1018050-mRNA-1:exon:7268;Parent=Msa1018050-mRNA-1 |
| chr7_1 | exon | 37845226 | 37845459 | 37845226 | ID=Msa1018050-mRNA-1:exon:7269;Parent=Msa1018050-mRNA-1 |
| chr7_1 | exon | 37848748 | 37848960 | 37848748 | ID=Msa1018050-mRNA-1:exon:7270;Parent=Msa1018050-mRNA-1 |
| chr7_1 | exon | 37848967 | 37849182 | 37848967 | ID=Msa1018050-mRNA-1:exon:7271;Parent=Msa1018050-mRNA-1 |
| chr7_1 | exon | 37849941 | 37850755 | 37849941 | ID=Msa1018050-mRNA-1:exon:7272;Parent=Msa1018050-mRNA-1 |
| chr7_1 | CDS | 37845025 | 37845207 | 37845025 | ID=Msa1018050-mRNA-1:cds;Parent=Msa1018050-mRNA-1 |
| chr7_1 | CDS | 37845226 | 37845459 | 37845226 | ID=Msa1018050-mRNA-1:cds;Parent=Msa1018050-mRNA-1 |
| chr7_1 | CDS | 37848748 | 37848960 | 37848748 | ID=Msa1018050-mRNA-1:cds;Parent=Msa1018050-mRNA-1 |
| chr7_1 | CDS | 37848967 | 37849182 | 37848967 | ID=Msa1018050-mRNA-1:cds;Parent=Msa1018050-mRNA-1 |
| chr7_1 | CDS | 37849941 | 37850474 | 37849941 | ID=Msa1018050-mRNA-1:cds;Parent=Msa1018050-mRNA-1 |
| chr7_1 | three_prime_UTR | 37850475 | 37850755 | 37850475 | ID=Msa1018050-mRNA-1:three_prime_utr;Parent=Msa1018050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
