AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0032370


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0032370 MtrunA17_Chr1g0190771 94.483 145 8 0 1 145 1 145 1.31e-97 286
Msa0032370 MtrunA17_Chr7g0274131 84.932 146 21 1 1 145 1 146 4.05e-87 259
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0032370 AT5G28840.2 84.828 145 22 0 1 145 1 145 5.41e-87 259
Msa0032370 AT5G28840.1 84.828 145 22 0 1 145 1 145 5.41e-87 259

Find 56 sgRNAs with CRISPR-Local

Find 349 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGCTCACACGCTGCTGTC+TGG 0.225784 1_1:+59437758 Msa0032370:intron
ATTGAAGCTGCTAGGATTAA+TGG 0.256067 1_1:+59432388 Msa0032370:CDS
ATCTTGAGAGAGAGCCTTAC+TGG 0.304697 1_1:+59432056 Msa0032370:CDS
ACATATATAGATAGCATAAT+TGG 0.321830 1_1:-59431130 None:intergenic
TTTCAATCTTGCCGCTGATA+TGG 0.324249 1_1:+59432294 Msa0032370:CDS
AATTCCATCTTGTTGATCTC+AGG 0.363929 1_1:+59432227 Msa0032370:CDS
AAAATTTCCATCACTGGTGC+TGG 0.368034 1_1:+59432094 Msa0032370:CDS
TGCCACGTGGCGACGCATAT+TGG 0.377268 1_1:-59437806 None:intergenic
CAGCTCACACGCTGCTGTCT+GGG 0.382060 1_1:+59437759 Msa0032370:intron
TTCAATCTTGCCGCTGATAT+GGG 0.385962 1_1:+59432295 Msa0032370:CDS
ACTGCTTAACGGTTACTAAA+GGG 0.409840 1_1:+59432260 Msa0032370:CDS
TTCTTCTAATCTATATATAT+AGG 0.411751 1_1:-59431193 None:intergenic
TGTCTTTGTGTGGAAGTAGA+TGG 0.413404 1_1:+59431098 Msa0032370:five_prime_UTR
ACATTATCATCACATCAATC+AGG 0.432026 1_1:+59431271 Msa0032370:five_prime_UTR
GTGGCATCGGATGCGCAGTT+TGG 0.433269 1_1:+59437823 Msa0032370:CDS
AAGCTTAAAATTTCCATCAC+TGG 0.443314 1_1:+59432088 Msa0032370:CDS
GCGACGCATATTGGACCAAC+TGG 0.453817 1_1:-59437797 None:intergenic
ATACATAATAACAGAATGAT+TGG 0.454190 1_1:-59432338 None:intergenic
ATGTATGGAGAGAAGAGGTT+TGG 0.454830 1_1:-59431252 None:intergenic
CTCTCTCTCAAGATTCTCAT+AGG 0.472504 1_1:-59432047 None:intergenic
AGGTTTGGTTTGAGTTGAGA+AGG 0.473129 1_1:-59431237 None:intergenic
TTCTGCAGGATGGGAAGTAC+TGG 0.475790 1_1:+59432001 Msa0032370:intron
AAATTTCCATCACTGGTGCT+GGG 0.477839 1_1:+59432095 Msa0032370:CDS
AACTGCTTAACGGTTACTAA+AGG 0.478063 1_1:+59432259 Msa0032370:CDS
CTAGGATTAATGGAATTAAG+AGG 0.478585 1_1:+59432398 Msa0032370:CDS
GCCGCTGATATGGGTGGAAT+GGG 0.482360 1_1:+59432304 Msa0032370:CDS
GTTTGAGTTGAGAAGGCAAT+TGG 0.493292 1_1:-59431230 None:intergenic
TGCCGCTGATATGGGTGGAA+TGG 0.494921 1_1:+59432303 Msa0032370:CDS
GGTCATGGATAACTGCTTAA+CGG 0.498357 1_1:+59432249 Msa0032370:CDS
ATTACATTATTGCTTCTGAC+TGG 0.512162 1_1:+59432164 Msa0032370:CDS
TATGCGTCGCCACGTGGCAT+CGG 0.520107 1_1:+59437810 Msa0032370:CDS
TGAGTTGAGAAGGCAATTGG+TGG 0.526061 1_1:-59431227 None:intergenic
TCTATATATATAGGACGAGA+AGG 0.537392 1_1:-59431184 None:intergenic
CAGCGGCAAGATTGAAAACA+TGG 0.540286 1_1:-59432288 None:intergenic
ATTGATGTGATGATAATGTA+TGG 0.541937 1_1:-59431267 None:intergenic
AATTTCCATCACTGGTGCTG+GGG 0.543928 1_1:+59432096 Msa0032370:CDS
TCTTGTTGATCTCAGGGTCA+TGG 0.544557 1_1:+59432234 Msa0032370:CDS
ATTCCATCTTGTTGATCTCA+GGG 0.549458 1_1:+59432228 Msa0032370:CDS
CTGCTTAACGGTTACTAAAG+GGG 0.550109 1_1:+59432261 Msa0032370:CDS
CTTAGCGCGGCGTCTCAAGA+AGG 0.553238 1_1:+59432135 Msa0032370:CDS
TCAATATGATTGAAGCTGCT+AGG 0.554345 1_1:+59432380 Msa0032370:CDS
AGTGTGCTTCACTCGCCAGT+TGG 0.568296 1_1:+59437782 Msa0032370:CDS
ATTTCCATCACTGGTGCTGG+GGG 0.574182 1_1:+59432097 Msa0032370:CDS
ATGAAAAGCTTGTCTTTGTG+TGG 0.590202 1_1:+59431088 Msa0032370:five_prime_UTR
TTATCGCGTCGCACTTAGCG+CGG 0.590377 1_1:+59432122 Msa0032370:CDS
AATCTTGCCGCTGATATGGG+TGG 0.591075 1_1:+59432298 Msa0032370:CDS
GTCCAATATGCGTCGCCACG+TGG 0.591231 1_1:+59437804 Msa0032370:CDS
AGCGCGGCGTCTCAAGAAGG+AGG 0.592364 1_1:+59432138 Msa0032370:CDS
TGACCCTGAGATCAACAAGA+TGG 0.595396 1_1:-59432231 None:intergenic
ATATATAGGACGAGAAGGGA+AGG 0.599216 1_1:-59431179 None:intergenic
CTAGCAAAATAACGAACAAG+TGG 0.606439 1_1:+59431156 Msa0032370:five_prime_UTR
CTATATATATAGGACGAGAA+GGG 0.614804 1_1:-59431183 None:intergenic
TGATAATGTATGGAGAGAAG+AGG 0.646893 1_1:-59431257 None:intergenic
ACCCATTCCACCCATATCAG+CGG 0.650854 1_1:-59432305 None:intergenic
GCGCGGCGTCTCAAGAAGGA+GGG 0.659404 1_1:+59432139 Msa0032370:CDS
ACTGCGCATCCGATGCCACG+TGG 0.704663 1_1:-59437819 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACAATTTTGAATATTTTAAT+GGG - chr1_1:59433418-59433437 None:intergenic 10.0%
!!! AACAATTTTGAATATTTTAA+TGG - chr1_1:59433419-59433438 None:intergenic 10.0%
!! TATATTATATTATAAAGTAG+CGG - chr1_1:59433707-59433726 None:intergenic 10.0%
!!! AGTAAATAATATATTTTTTG+AGG + chr1_1:59434694-59434713 Msa0032370:intron 10.0%
!! ACAAATTGTAATTTATAAAA+CGG + chr1_1:59434728-59434747 Msa0032370:intron 10.0%
!!! TTTAGATTTTTATTTTTTGA+AGG + chr1_1:59434806-59434825 Msa0032370:intron 10.0%
!!! ACTTTAAATAATTATTTTTG+AGG - chr1_1:59434864-59434883 None:intergenic 10.0%
!!! TTTTTTTAATTGCAAATTAT+TGG + chr1_1:59435226-59435245 Msa0032370:intron 10.0%
!!! TTTTTTAATTGCAAATTATT+GGG + chr1_1:59435227-59435246 Msa0032370:intron 10.0%
!!! TTGATAAAGATAATTATTTT+CGG - chr1_1:59435497-59435516 None:intergenic 10.0%
!!! TTATTCAAACAATTATTTTT+TGG - chr1_1:59436378-59436397 None:intergenic 10.0%
!! GTAATAATGATATAAATTAT+CGG + chr1_1:59436560-59436579 Msa0032370:intron 10.0%
!! AAATAAGAATAAGAAATAAA+AGG - chr1_1:59437332-59437351 None:intergenic 10.0%
!! TTCTTCTAATCTATATATAT+AGG - chr1_1:59431196-59431215 None:intergenic 15.0%
!! AATTAAAAAAAGAGAAATTG+AGG - chr1_1:59431303-59431322 None:intergenic 15.0%
!! TATTATCGATAATAATATTG+CGG + chr1_1:59431377-59431396 Msa0032370:intron 15.0%
!!! CAATTTTTTGACTAAAATTT+TGG - chr1_1:59431640-59431659 None:intergenic 15.0%
!! TAAATTATACTTTGAATTTG+TGG + chr1_1:59432803-59432822 Msa0032370:intron 15.0%
!! AAATTATACTTTGAATTTGT+GGG + chr1_1:59432804-59432823 Msa0032370:intron 15.0%
!! TAAAAAATGTACATTCTATT+GGG - chr1_1:59432845-59432864 None:intergenic 15.0%
!! TTAAAAAATGTACATTCTAT+TGG - chr1_1:59432846-59432865 None:intergenic 15.0%
!!! TTTTAAAAATTACATTGACT+CGG + chr1_1:59432860-59432879 Msa0032370:intron 15.0%
!! TATAAAGTATAAACACAAAT+TGG + chr1_1:59433128-59433147 Msa0032370:intron 15.0%
!!! ACAATTCTAAATATTTTGAT+TGG + chr1_1:59433467-59433486 Msa0032370:intron 15.0%
!! TTAATAGTCCAAAATAAATT+TGG - chr1_1:59433501-59433520 None:intergenic 15.0%
!! TAATTTGAAGAAGAAAAAAA+AGG - chr1_1:59433835-59433854 None:intergenic 15.0%
!! ATAAAAATCTAAATGCATAT+AGG - chr1_1:59434799-59434818 None:intergenic 15.0%
!! TTAATAATATTATCTATCGT+TGG - chr1_1:59434908-59434927 None:intergenic 15.0%
!!! CTATTTGAACTTTTTTTTTT+GGG - chr1_1:59435108-59435127 None:intergenic 15.0%
!!! ACTATTTGAACTTTTTTTTT+TGG - chr1_1:59435109-59435128 None:intergenic 15.0%
!! TTTGAATGTATATTATTTAC+AGG + chr1_1:59435203-59435222 Msa0032370:intron 15.0%
!!! ACCATTTTATGATAATTTTT+AGG + chr1_1:59436238-59436257 Msa0032370:intron 15.0%
!! TCCTAAAAATTATCATAAAA+TGG - chr1_1:59436242-59436261 None:intergenic 15.0%
!!! TTTTTCTTTTTTTTTACAAG+AGG + chr1_1:59436715-59436734 Msa0032370:intron 15.0%
!!! AAAATAATAATACAAGGTTT+TGG + chr1_1:59437019-59437038 Msa0032370:intron 15.0%
!!! TTTTATTTTCACTAAAAAGA+AGG + chr1_1:59437464-59437483 Msa0032370:intron 15.0%
!! ACATATATAGATAGCATAAT+TGG - chr1_1:59431133-59431152 None:intergenic 20.0%
!! TTCATTAACCTAATGTAAAA+CGG + chr1_1:59431436-59431455 Msa0032370:intron 20.0%
!! TATAAAATAGCAGTGATAAA+TGG - chr1_1:59431556-59431575 None:intergenic 20.0%
!!! TGACTAAAATTTTGGTTTTT+AGG - chr1_1:59431632-59431651 None:intergenic 20.0%
!! TAAGTACAACTCAAATTAAA+AGG - chr1_1:59431778-59431797 None:intergenic 20.0%
!! ATGGTTGACAAAAATAAATA+GGG - chr1_1:59431832-59431851 None:intergenic 20.0%
!! TATGGTTGACAAAAATAAAT+AGG - chr1_1:59431833-59431852 None:intergenic 20.0%
!! TGAAAACAATTAATTCACTA+TGG - chr1_1:59431851-59431870 None:intergenic 20.0%
!!! TTCAATTAAGACCAATTTTT+TGG + chr1_1:59431978-59431997 Msa0032370:intron 20.0%
!! ATACATAATAACAGAATGAT+TGG - chr1_1:59432341-59432360 None:intergenic 20.0%
!!! TGCATTCTTTCTTTTTATTA+AGG + chr1_1:59432762-59432781 Msa0032370:intron 20.0%
!!! AATTTATAAAGTCACTTTTG+TGG - chr1_1:59432789-59432808 None:intergenic 20.0%
!! AATTATACTTTGAATTTGTG+GGG + chr1_1:59432805-59432824 Msa0032370:intron 20.0%
!!! TTTAAAAATTACATTGACTC+GGG + chr1_1:59432861-59432880 Msa0032370:intron 20.0%
!! TAAATCAAATTAACAATGCA+TGG + chr1_1:59433024-59433043 Msa0032370:intron 20.0%
!! TGTGTTTATACTTTATAACA+TGG - chr1_1:59433125-59433144 None:intergenic 20.0%
!!! TTTAATTGTTTTGGAAATGT+TGG - chr1_1:59433159-59433178 None:intergenic 20.0%
!!! AACTCTTTGTTTAATTGTTT+TGG - chr1_1:59433168-59433187 None:intergenic 20.0%
!! CAATTAAACAAAGAGTTTAA+TGG + chr1_1:59433171-59433190 Msa0032370:intron 20.0%
!! ACACATGAACAATTAAAATA+GGG + chr1_1:59433217-59433236 Msa0032370:intron 20.0%
!!! ATTCTGTTATATCTTTTAGT+TGG - chr1_1:59433602-59433621 None:intergenic 20.0%
!! ACTAATAATACAAACATAGA+AGG - chr1_1:59433628-59433647 None:intergenic 20.0%
!! AATTTCCTCATAATCAAATA+AGG + chr1_1:59434057-59434076 Msa0032370:intron 20.0%
!! TTAATAATGTAAAGCTAGAA+AGG - chr1_1:59434612-59434631 None:intergenic 20.0%
!! ACAAGTATTAATTCTTTCAT+TGG - chr1_1:59435173-59435192 None:intergenic 20.0%
!! TTAAAATGCAAAATACCATT+CGG - chr1_1:59435470-59435489 None:intergenic 20.0%
!! TACTATTGACAATGTTAATT+AGG + chr1_1:59435560-59435579 Msa0032370:intron 20.0%
!! TTCAACATAAATCCAAATTA+AGG + chr1_1:59435678-59435697 Msa0032370:intron 20.0%
!! AAGGATGTTATCTTAAATAA+GGG - chr1_1:59435840-59435859 None:intergenic 20.0%
!! AAAGGATGTTATCTTAAATA+AGG - chr1_1:59435841-59435860 None:intergenic 20.0%
!! AAATTCCATAATCCAATATA+AGG + chr1_1:59436046-59436065 Msa0032370:intron 20.0%
!! AATTCCATAATCCAATATAA+GGG + chr1_1:59436047-59436066 Msa0032370:intron 20.0%
!!! AATAATGGAAAGTATCAAAA+AGG - chr1_1:59436104-59436123 None:intergenic 20.0%
!! TTGAAGTCAAAACAAAATAA+TGG - chr1_1:59436119-59436138 None:intergenic 20.0%
!!! TTCTTTCAATTGTTATTTGA+TGG + chr1_1:59436521-59436540 Msa0032370:intron 20.0%
!!! TTTGCTCCATTTTATTTTTT+CGG + chr1_1:59436680-59436699 Msa0032370:intron 20.0%
!! TAGGGTTATAAAATAAAACT+AGG + chr1_1:59436752-59436771 Msa0032370:intron 20.0%
!! AGGGTTATAAAATAAAACTA+GGG + chr1_1:59436753-59436772 Msa0032370:intron 20.0%
!! AAAAGCAAAGATTTAAAGAA+AGG + chr1_1:59436925-59436944 Msa0032370:intron 20.0%
!! TTTATATTGTCCAAGATATA+TGG + chr1_1:59436983-59437002 Msa0032370:intron 20.0%
!! TTATATTGTCCAAGATATAT+GGG + chr1_1:59436984-59437003 Msa0032370:intron 20.0%
!! TTTATATATCCCATATATCT+TGG - chr1_1:59436996-59437015 None:intergenic 20.0%
!! TGTTGAATAAAAAAAACCAT+TGG - chr1_1:59437296-59437315 None:intergenic 20.0%
!! TAAGAATAAGAAATAAAAGG+TGG - chr1_1:59437329-59437348 None:intergenic 20.0%
!! ATTGATGTGATGATAATGTA+TGG - chr1_1:59431270-59431289 None:intergenic 25.0%
! GATAATAATATTGCGGTTTA+GGG + chr1_1:59431384-59431403 Msa0032370:intron 25.0%
! GTTTAACCTTTGAATTATCA+AGG + chr1_1:59431406-59431425 Msa0032370:intron 25.0%
!! ACAAATCCTTGATAATTCAA+AGG - chr1_1:59431415-59431434 None:intergenic 25.0%
! TCATTAACCTAATGTAAAAC+GGG + chr1_1:59431437-59431456 Msa0032370:intron 25.0%
!!! TTATCACTGCTATTTTATAC+TGG + chr1_1:59431557-59431576 Msa0032370:intron 25.0%
!! GAAATTTTAAGCTTTTCTGA+TGG - chr1_1:59432082-59432101 None:intergenic 25.0%
! CAACAACAAAAAATGCAATT+TGG - chr1_1:59432735-59432754 None:intergenic 25.0%
!!! AATTGCATTTTTTGTTGTTG+TGG + chr1_1:59432735-59432754 Msa0032370:intron 25.0%
!!! ATTGCATTTTTTGTTGTTGT+GGG + chr1_1:59432736-59432755 Msa0032370:intron 25.0%
! GTTTATACTTTATAACATGG+TGG - chr1_1:59433122-59433141 None:intergenic 25.0%
! TTAAACAAAGAGTTTAATGG+TGG + chr1_1:59433174-59433193 Msa0032370:intron 25.0%
! CACACATGAACAATTAAAAT+AGG + chr1_1:59433216-59433235 Msa0032370:intron 25.0%
!! TTGTGTGTCCAAATTTATTT+TGG + chr1_1:59433490-59433509 Msa0032370:intron 25.0%
! ATTTCTGACCTAAGTATATA+AGG - chr1_1:59433792-59433811 None:intergenic 25.0%
! GAAGAAAAAAAAGGATAAGA+TGG - chr1_1:59433826-59433845 None:intergenic 25.0%
!!! AAGTTGAAGTATTTTCTTCT+GGG + chr1_1:59433915-59433934 Msa0032370:intron 25.0%
! TTATCTATATCACTTTGTCA+TGG + chr1_1:59434170-59434189 Msa0032370:intron 25.0%
! TTATCATGTATATATGCATC+TGG + chr1_1:59434477-59434496 Msa0032370:intron 25.0%
! CCTATTGAGAAATTTATATG+CGG - chr1_1:59435025-59435044 None:intergenic 25.0%
!!! TTTGAACTTTTTTTTTTGGG+TGG - chr1_1:59435105-59435124 None:intergenic 25.0%
! ATATTATTGTTCAACAACCA+TGG + chr1_1:59435437-59435456 Msa0032370:intron 25.0%
! TAAAATGCAAAATACCATTC+GGG - chr1_1:59435469-59435488 None:intergenic 25.0%
! TCATGACTAAAAGTTTCATA+AGG - chr1_1:59435611-59435630 None:intergenic 25.0%
! GTAGATAAGAACTAAGTTAT+TGG - chr1_1:59435724-59435743 None:intergenic 25.0%
! TGAATGAATGAATTAGATGA+TGG - chr1_1:59435801-59435820 None:intergenic 25.0%
!! TACTTTGTTTGATTAGATCA+AGG + chr1_1:59436002-59436021 Msa0032370:intron 25.0%
!!! TATTTTGTTTTGACTTCAAG+TGG + chr1_1:59436120-59436139 Msa0032370:intron 25.0%
! GATAAAATGAGCTTGAATTA+TGG + chr1_1:59436183-59436202 Msa0032370:intron 25.0%
! TTACTTTCTCTCAATTGATT+TGG + chr1_1:59436295-59436314 Msa0032370:intron 25.0%
! ATCATACACATTAAATGCTT+AGG + chr1_1:59436403-59436422 Msa0032370:intron 25.0%
! TAAATGCTTAGGTGAAAATT+TGG + chr1_1:59436414-59436433 Msa0032370:intron 25.0%
! ATTTGGAAATAGATTTGATG+TGG + chr1_1:59436431-59436450 Msa0032370:intron 25.0%
!!! AGCAAAATGTTGTTTTTTCT+TGG + chr1_1:59436628-59436647 Msa0032370:intron 25.0%
!!! TTGCTCCATTTTATTTTTTC+GGG + chr1_1:59436681-59436700 Msa0032370:intron 25.0%
! TTATAACCCTAATAGTTTCT+TGG - chr1_1:59436743-59436762 None:intergenic 25.0%
!!! ACGTTTTAAAACACGAATAA+TGG + chr1_1:59436795-59436814 Msa0032370:intron 25.0%
! ATCTTCATATCGAATAAAAG+TGG + chr1_1:59436826-59436845 Msa0032370:intron 25.0%
!! TGGTCCATGTATAATTTTAT+GGG - chr1_1:59436854-59436873 None:intergenic 25.0%
!! TTGGTCCATGTATAATTTTA+TGG - chr1_1:59436855-59436874 None:intergenic 25.0%
! AAAATTATACATGGACCAAA+AGG + chr1_1:59436856-59436875 Msa0032370:intron 25.0%
!! CTATACTTTTCTTTTCCTTT+TGG - chr1_1:59436874-59436893 None:intergenic 25.0%
! AATAAAAAAAACCATTGGAG+AGG - chr1_1:59437291-59437310 None:intergenic 25.0%
! AATAAGAAATAAAAGGTGGT+GGG - chr1_1:59437325-59437344 None:intergenic 25.0%
! TTTCTCTATAAATAGAGACT+TGG - chr1_1:59437579-59437598 None:intergenic 25.0%
CTATATATATAGGACGAGAA+GGG - chr1_1:59431186-59431205 None:intergenic 30.0%
TCTATATATATAGGACGAGA+AGG - chr1_1:59431187-59431206 None:intergenic 30.0%
ACATTATCATCACATCAATC+AGG + chr1_1:59431271-59431290 Msa0032370:five_prime_UTR 30.0%
CGATAATAATATTGCGGTTT+AGG + chr1_1:59431383-59431402 Msa0032370:intron 30.0%
! TAGTAAACCCGTTTTACATT+AGG - chr1_1:59431447-59431466 None:intergenic 30.0%
! AGTACTGGAAAAACTAACTA+TGG + chr1_1:59432016-59432035 Msa0032370:CDS 30.0%
AAGCTTAAAATTTCCATCAC+TGG + chr1_1:59432088-59432107 Msa0032370:CDS 30.0%
ATTACATTATTGCTTCTGAC+TGG + chr1_1:59432164-59432183 Msa0032370:CDS 30.0%
CTAGGATTAATGGAATTAAG+AGG + chr1_1:59432398-59432417 Msa0032370:CDS 30.0%
!! TCAACCATTTTTCTTGTAGT+AGG - chr1_1:59432570-59432589 None:intergenic 30.0%
TTGAGTACGATAGAAGAAAA+TGG + chr1_1:59432586-59432605 Msa0032370:intron 30.0%
ATAGTTAAAATTGCAATGCG+AGG - chr1_1:59432955-59432974 None:intergenic 30.0%
TGATTTGAGCTTCAACATAA+TGG - chr1_1:59432986-59433005 None:intergenic 30.0%
! TTTTGTCAATACTACAGTCA+AGG - chr1_1:59433082-59433101 None:intergenic 30.0%
!! TGTAGTATTGACAAAATAGC+TGG + chr1_1:59433086-59433105 Msa0032370:intron 30.0%
!!! ATTGTTTTGGAAATGTTGGA+CGG - chr1_1:59433155-59433174 None:intergenic 30.0%
!! TTAAGCTATAAAGAGTGTCT+CGG - chr1_1:59433261-59433280 None:intergenic 30.0%
GAAAACAAATCCTATACACA+TGG + chr1_1:59433652-59433671 Msa0032370:intron 30.0%
AAGTATATAAGGCAGAGATA+TGG - chr1_1:59433781-59433800 None:intergenic 30.0%
TATCTCTGCCTTATATACTT+AGG + chr1_1:59433781-59433800 Msa0032370:intron 30.0%
AGCAGACAAAAATTATCATG+AGG + chr1_1:59433859-59433878 Msa0032370:intron 30.0%
GCAGACAAAAATTATCATGA+GGG + chr1_1:59433860-59433879 Msa0032370:intron 30.0%
AAATTATCATGAGGGTCTTA+AGG + chr1_1:59433868-59433887 Msa0032370:intron 30.0%
CAGAAGAAAATACTTCAACT+TGG - chr1_1:59433916-59433935 None:intergenic 30.0%
!! CAAGTTGAAGTATTTTCTTC+TGG + chr1_1:59433914-59433933 Msa0032370:intron 30.0%
CTCATAATCAAATAAGGCAT+GGG + chr1_1:59434063-59434082 Msa0032370:intron 30.0%
! CTTCAGATTAAAGGTGTATT+TGG + chr1_1:59434336-59434355 Msa0032370:intron 30.0%
!! TTAGTTTTCTGACCTTTCTA+TGG - chr1_1:59434508-59434527 None:intergenic 30.0%
TTATTGTAGTGCATGTGAAA+GGG + chr1_1:59434663-59434682 Msa0032370:intron 30.0%
ATCTAAATGCATATAGGTAG+TGG - chr1_1:59434793-59434812 None:intergenic 30.0%
CCGCATATAAATTTCTCAAT+AGG + chr1_1:59435022-59435041 Msa0032370:intron 30.0%
!! TTCATTGGTTTCCAACTATT+TGG - chr1_1:59435158-59435177 None:intergenic 30.0%
CTCATCAATACTATGATATG+CGG - chr1_1:59435269-59435288 None:intergenic 30.0%
TCATGACTATTTGTTTGTAG+TGG + chr1_1:59435625-59435644 Msa0032370:intron 30.0%
CATGACTATTTGTTTGTAGT+GGG + chr1_1:59435626-59435645 Msa0032370:intron 30.0%
ATGACTATTTGTTTGTAGTG+GGG + chr1_1:59435627-59435646 Msa0032370:intron 30.0%
ACAGATCTATGTCCTTAATT+TGG - chr1_1:59435693-59435712 None:intergenic 30.0%
TCTTATCTACACTTTACTTG+AGG + chr1_1:59435734-59435753 Msa0032370:intron 30.0%
!! ATGAATTAGATGATGGACAA+TGG - chr1_1:59435794-59435813 None:intergenic 30.0%
!! TTTCCTTTTGATGACTCATA+AGG - chr1_1:59435958-59435977 None:intergenic 30.0%
TGAATCATTAACGATTGCAA+TGG - chr1_1:59436461-59436480 None:intergenic 30.0%
!! TTCTTGGATGCTACTTATTT+TGG + chr1_1:59436644-59436663 Msa0032370:intron 30.0%
GGATCCCATAAAATTATACA+TGG + chr1_1:59436847-59436866 Msa0032370:intron 30.0%
! ACATCTAAGACCATTTACAA+TGG + chr1_1:59437170-59437189 Msa0032370:intron 30.0%
TTAAGAGAGAGAAAATGATG+TGG - chr1_1:59437246-59437265 None:intergenic 30.0%
ATAAGAAATAAAAGGTGGTG+GGG - chr1_1:59437324-59437343 None:intergenic 30.0%
GAATAAGAAATAAAAGGTGG+TGG - chr1_1:59437326-59437345 None:intergenic 30.0%
GAAGAAGATAGTGAAAAACT+TGG + chr1_1:59437527-59437546 Msa0032370:intron 30.0%
ATGAAAAGCTTGTCTTTGTG+TGG + chr1_1:59431088-59431107 Msa0032370:five_prime_UTR 35.0%
CTAGCAAAATAACGAACAAG+TGG + chr1_1:59431156-59431175 Msa0032370:five_prime_UTR 35.0%
! TGATAATGTATGGAGAGAAG+AGG - chr1_1:59431260-59431279 None:intergenic 35.0%
GCATAGACAATTGATATGCT+AGG - chr1_1:59431756-59431775 None:intergenic 35.0%
GAATGCAATACAACACATGA+AGG - chr1_1:59431916-59431935 None:intergenic 35.0%
ATCCTGCAGAACCAAAAAAT+TGG - chr1_1:59431992-59432011 None:intergenic 35.0%
!!! AATTTTTTGGTTCTGCAGGA+TGG + chr1_1:59431991-59432010 Msa0032370:intron 35.0%
!!! ATTTTTTGGTTCTGCAGGAT+GGG + chr1_1:59431992-59432011 Msa0032370:intron 35.0%
AATTCCATCTTGTTGATCTC+AGG + chr1_1:59432227-59432246 Msa0032370:CDS 35.0%
ATTCCATCTTGTTGATCTCA+GGG + chr1_1:59432228-59432247 Msa0032370:CDS 35.0%
AACTGCTTAACGGTTACTAA+AGG + chr1_1:59432259-59432278 Msa0032370:CDS 35.0%
ACTGCTTAACGGTTACTAAA+GGG + chr1_1:59432260-59432279 Msa0032370:CDS 35.0%
TCAATATGATTGAAGCTGCT+AGG + chr1_1:59432380-59432399 Msa0032370:CDS 35.0%
ATTGAAGCTGCTAGGATTAA+TGG + chr1_1:59432388-59432407 Msa0032370:CDS 35.0%
! CATTTTTCTTGTAGTAGGTC+AGG - chr1_1:59432565-59432584 None:intergenic 35.0%
CTGACCTACTACAAGAAAAA+TGG + chr1_1:59432563-59432582 Msa0032370:intron 35.0%
! GTTGCTTTAGATGATTGTGA+TGG - chr1_1:59432619-59432638 None:intergenic 35.0%
TTAATCCTTCTCAAGTGAAG+TGG - chr1_1:59432701-59432720 None:intergenic 35.0%
ACTTGAGAAGGATTAATGTG+TGG + chr1_1:59432705-59432724 Msa0032370:intron 35.0%
CTTGAGAAGGATTAATGTGT+GGG + chr1_1:59432706-59432725 Msa0032370:intron 35.0%
CCACAATATCAAGAATGATG+CGG - chr1_1:59432903-59432922 None:intergenic 35.0%
AACAAAGAGTTTAATGGTGG+TGG + chr1_1:59433177-59433196 Msa0032370:intron 35.0%
ACAAAGAGTTTAATGGTGGT+GGG + chr1_1:59433178-59433197 Msa0032370:intron 35.0%
ATAGTGATCTCCATGTGTAT+AGG - chr1_1:59433665-59433684 None:intergenic 35.0%
CAGAGATATGGATGAAACAA+AGG - chr1_1:59433769-59433788 None:intergenic 35.0%
!! CCATGCCTTATTTGATTATG+AGG - chr1_1:59434065-59434084 None:intergenic 35.0%
CCTCATAATCAAATAAGGCA+TGG + chr1_1:59434062-59434081 Msa0032370:intron 35.0%
AATCAAATAAGGCATGGGAT+TGG + chr1_1:59434068-59434087 Msa0032370:intron 35.0%
CAGCTATAACATATCAGAGA+AGG - chr1_1:59434243-59434262 None:intergenic 35.0%
CTACAATATTCAATGCAAGC+AGG - chr1_1:59434308-59434327 None:intergenic 35.0%
CTGCTTGCATTGAATATTGT+AGG + chr1_1:59434306-59434325 Msa0032370:intron 35.0%
GTATCTGTGTTGTGTTTCTT+AGG + chr1_1:59434451-59434470 Msa0032370:intron 35.0%
ATGTATATATGCATCTGGCA+TGG + chr1_1:59434482-59434501 Msa0032370:intron 35.0%
AACCAGATATAGTACTGTGT+TGG + chr1_1:59434566-59434585 Msa0032370:intron 35.0%
TTCCAACACAGTACTATATC+TGG - chr1_1:59434571-59434590 None:intergenic 35.0%
CTTATTGTAGTGCATGTGAA+AGG + chr1_1:59434662-59434681 Msa0032370:intron 35.0%
AGTAGCAAAGTCCAAATAGT+TGG + chr1_1:59435144-59435163 Msa0032370:intron 35.0%
AACTCATCAATACTATGCTG+TGG - chr1_1:59435303-59435322 None:intergenic 35.0%
! CTTATGTTGTACATTTGCTG+TGG - chr1_1:59435335-59435354 None:intergenic 35.0%
! GTAGTGGGGAAATGTTAATT+AGG + chr1_1:59435641-59435660 Msa0032370:intron 35.0%
! ATGGATGGTAGAGTTGATTA+TGG - chr1_1:59435775-59435794 None:intergenic 35.0%
!! ATTAGATGATGGACAATGGA+TGG - chr1_1:59435790-59435809 None:intergenic 35.0%
!! ACTTGGACTCTTTTGTTTGT+TGG - chr1_1:59435925-59435944 None:intergenic 35.0%
CATAAGGCAGTAAACTAACT+TGG - chr1_1:59435942-59435961 None:intergenic 35.0%
AACAAAGTAGTCGTCATGTT+TGG - chr1_1:59435991-59436010 None:intergenic 35.0%
TGGACCCTTATATTGGATTA+TGG - chr1_1:59436054-59436073 None:intergenic 35.0%
ACAATGTTGGACCCTTATAT+TGG - chr1_1:59436061-59436080 None:intergenic 35.0%
! GTCCTTTGTGAACTTTTTGA+GGG + chr1_1:59436161-59436180 Msa0032370:intron 35.0%
ATCCCTCAAAAAGTTCACAA+AGG - chr1_1:59436166-59436185 None:intergenic 35.0%
!!! CTCCATTTTATTTTTTCGGG+AGG + chr1_1:59436684-59436703 Msa0032370:intron 35.0%
CACCTCCCGAAAAAATAAAA+TGG - chr1_1:59436689-59436708 None:intergenic 35.0%
!! AGAGGTACCAAGAAACTATT+AGG + chr1_1:59436733-59436752 Msa0032370:intron 35.0%
! GAGGTACCAAGAAACTATTA+GGG + chr1_1:59436734-59436753 Msa0032370:intron 35.0%
!! ATGTTGGTGACCATTGTAAA+TGG - chr1_1:59437183-59437202 None:intergenic 35.0%
!! TGTTGAAGGGTGTTTAATGT+TGG - chr1_1:59437199-59437218 None:intergenic 35.0%
!! TTGAAAAAGTGGGTGTTGAA+GGG - chr1_1:59437212-59437231 None:intergenic 35.0%
!! ATTGAAAAAGTGGGTGTTGA+AGG - chr1_1:59437213-59437232 None:intergenic 35.0%
GTGTTGGGAATTGAAAAAGT+GGG - chr1_1:59437222-59437241 None:intergenic 35.0%
! AGTGTTGGGAATTGAAAAAG+TGG - chr1_1:59437223-59437242 None:intergenic 35.0%
! AGAAAATGATGTGGAGTGTT+GGG - chr1_1:59437237-59437256 None:intergenic 35.0%
TTCAACTTTAACCTCTCCAA+TGG + chr1_1:59437277-59437296 Msa0032370:intron 35.0%
! GAGACTTGGTTCATTTCATT+TGG - chr1_1:59437565-59437584 None:intergenic 35.0%
!! TTGGTCTTTTATTGGTTGTC+TGG - chr1_1:59437689-59437708 None:intergenic 35.0%
!!! GACATGTGTTGGTCTTTTAT+TGG - chr1_1:59437697-59437716 None:intergenic 35.0%
AAGCAGAATTGTGGAATGAT+GGG - chr1_1:59437721-59437740 None:intergenic 35.0%
TGTCTTTGTGTGGAAGTAGA+TGG + chr1_1:59431098-59431117 Msa0032370:five_prime_UTR 40.0%
ATATATAGGACGAGAAGGGA+AGG - chr1_1:59431182-59431201 None:intergenic 40.0%
!! GTTTGAGTTGAGAAGGCAAT+TGG - chr1_1:59431233-59431252 None:intergenic 40.0%
!! AGGTTTGGTTTGAGTTGAGA+AGG - chr1_1:59431240-59431259 None:intergenic 40.0%
ATGTATGGAGAGAAGAGGTT+TGG - chr1_1:59431255-59431274 None:intergenic 40.0%
CAATTGATATGCTAGGACGT+AGG - chr1_1:59431749-59431768 None:intergenic 40.0%
! ATACAACACATGAAGGCACA+TGG - chr1_1:59431909-59431928 None:intergenic 40.0%
!!! GACCAATTTTTTGGTTCTGC+AGG + chr1_1:59431987-59432006 Msa0032370:intron 40.0%
CTCTCTCTCAAGATTCTCAT+AGG - chr1_1:59432050-59432069 None:intergenic 40.0%
AAAATTTCCATCACTGGTGC+TGG + chr1_1:59432094-59432113 Msa0032370:CDS 40.0%
AAATTTCCATCACTGGTGCT+GGG + chr1_1:59432095-59432114 Msa0032370:CDS 40.0%
GAAAAATGAGCACATGACTG+AGG + chr1_1:59432189-59432208 Msa0032370:CDS 40.0%
GGTCATGGATAACTGCTTAA+CGG + chr1_1:59432249-59432268 Msa0032370:CDS 40.0%
CTGCTTAACGGTTACTAAAG+GGG + chr1_1:59432261-59432280 Msa0032370:CDS 40.0%
TTTCAATCTTGCCGCTGATA+TGG + chr1_1:59432294-59432313 Msa0032370:CDS 40.0%
TTCAATCTTGCCGCTGATAT+GGG + chr1_1:59432295-59432314 Msa0032370:CDS 40.0%
GAAAACCACTTCACTTGAGA+AGG + chr1_1:59432693-59432712 Msa0032370:intron 40.0%
CCGCATCATTCTTGATATTG+TGG + chr1_1:59432900-59432919 Msa0032370:intron 40.0%
!! AAAGTGCTTAAAGAGTGTCC+TGG + chr1_1:59433375-59433394 Msa0032370:intron 40.0%
!! AAGTGCTTAAAGAGTGTCCT+GGG + chr1_1:59433376-59433395 Msa0032370:intron 40.0%
GGTTGAGAACAGCAACAATT+TGG + chr1_1:59433889-59433908 Msa0032370:intron 40.0%
! GGCTTTTCATCTCTGTTTGT+TGG + chr1_1:59434031-59434050 Msa0032370:intron 40.0%
TGTCATGGAAACAACTCTGT+TGG + chr1_1:59434185-59434204 Msa0032370:intron 40.0%
GTCATGGAAACAACTCTGTT+GGG + chr1_1:59434186-59434205 Msa0032370:intron 40.0%
GGAGAGACACTTCAGATTAA+AGG + chr1_1:59434327-59434346 Msa0032370:intron 40.0%
! AAATGCATATAGGTAGTGGC+CGG - chr1_1:59434789-59434808 None:intergenic 40.0%
!!! TTTTTTTTTGGGTGGTGTCC+CGG - chr1_1:59435097-59435116 None:intergenic 40.0%
GAAATGTTAATTAGGCGAGG+TGG + chr1_1:59435649-59435668 Msa0032370:intron 40.0%
! CACATCATTTTCTTCCAGGT+GGG - chr1_1:59435900-59435919 None:intergenic 40.0%
CTGCCTTATGAGTCATCAAA+AGG + chr1_1:59435952-59435971 Msa0032370:intron 40.0%
ACAGTCCTTGATCACAATGT+TGG - chr1_1:59436074-59436093 None:intergenic 40.0%
TTGACTTCAAGTGGCAAACA+TGG + chr1_1:59436129-59436148 Msa0032370:intron 40.0%
! CGTCCTTTGTGAACTTTTTG+AGG + chr1_1:59436160-59436179 Msa0032370:intron 40.0%
ATGGAGCAAAAGACTATGCT+TGG - chr1_1:59436670-59436689 None:intergenic 40.0%
!! CCAGTGGCTAGAGTTATTTT+TGG - chr1_1:59437122-59437141 None:intergenic 40.0%
CCAAAAATAACTCTAGCCAC+TGG + chr1_1:59437119-59437138 Msa0032370:intron 40.0%
ATCAATGAGAATGATGCCAG+TGG - chr1_1:59437138-59437157 None:intergenic 40.0%
GAGAAAATGATGTGGAGTGT+TGG - chr1_1:59437238-59437257 None:intergenic 40.0%
AGCAGAATTGTGGAATGATG+GGG - chr1_1:59437720-59437739 None:intergenic 40.0%
GAAGCAGAATTGTGGAATGA+TGG - chr1_1:59437722-59437741 None:intergenic 40.0%
! TGAGTTGAGAAGGCAATTGG+TGG - chr1_1:59431230-59431249 None:intergenic 45.0%
ACACACCAAGTGCAGATAAG+TGG + chr1_1:59431707-59431726 Msa0032370:intron 45.0%
CACACCAAGTGCAGATAAGT+GGG + chr1_1:59431708-59431727 Msa0032370:intron 45.0%
ACACCAAGTGCAGATAAGTG+GGG + chr1_1:59431709-59431728 Msa0032370:intron 45.0%
ATTCCCCACTTATCTGCACT+TGG - chr1_1:59431715-59431734 None:intergenic 45.0%
ATCTTGAGAGAGAGCCTTAC+TGG + chr1_1:59432056-59432075 Msa0032370:CDS 45.0%
! AGCTTTTCTGATGGCCAGTA+AGG - chr1_1:59432073-59432092 None:intergenic 45.0%
! AATTTCCATCACTGGTGCTG+GGG + chr1_1:59432096-59432115 Msa0032370:CDS 45.0%
TGACCCTGAGATCAACAAGA+TGG - chr1_1:59432234-59432253 None:intergenic 45.0%
TCTTGTTGATCTCAGGGTCA+TGG + chr1_1:59432234-59432253 Msa0032370:CDS 45.0%
CAGCGGCAAGATTGAAAACA+TGG - chr1_1:59432291-59432310 None:intergenic 45.0%
CAATGCGAGGTAACAAAGTC+TGG - chr1_1:59432942-59432961 None:intergenic 45.0%
GACAAAATAGCTGGTGAGAG+AGG + chr1_1:59433095-59433114 Msa0032370:intron 45.0%
!! AGTGCTTAAAGAGTGTCCTG+GGG + chr1_1:59433377-59433396 Msa0032370:intron 45.0%
GAAATGTTAACAAGTGCCCC+AGG - chr1_1:59433396-59433415 None:intergenic 45.0%
!! TTCTGGGATTGTTAGAGCCA+TGG + chr1_1:59433931-59433950 Msa0032370:intron 45.0%
! AGAGGCATACTTCTTGTGTG+AGG - chr1_1:59433994-59434013 None:intergenic 45.0%
! CACACAAGAAGTATGCCTCT+AGG + chr1_1:59433994-59434013 Msa0032370:intron 45.0%
TAGTGTACTACACAAGCAGC+CGG + chr1_1:59434767-59434786 Msa0032370:intron 45.0%
GGGGAAATGTTAATTAGGCG+AGG + chr1_1:59435646-59435665 Msa0032370:intron 45.0%
! GCACATCATTTTCTTCCAGG+TGG - chr1_1:59435901-59435920 None:intergenic 45.0%
! GGTGCACATCATTTTCTTCC+AGG - chr1_1:59435904-59435923 None:intergenic 45.0%
AGGGTCCAACATTGTGATCA+AGG + chr1_1:59436066-59436085 Msa0032370:intron 45.0%
GCACTGTTAATGCTTTGACC+AGG - chr1_1:59437072-59437091 None:intergenic 45.0%
GCAGAATTGTGGAATGATGG+GGG - chr1_1:59437719-59437738 None:intergenic 45.0%
AGGAGAGAGAAGCAGAATTG+TGG - chr1_1:59437730-59437749 None:intergenic 45.0%
!!! AAAAATAATTATTTAAAGTT+CGG + chr1_1:59434865-59434884 Msa0032370:intron 5.0%
!! ATATTTATTATCTTTAATAA+AGG - chr1_1:59435859-59435878 None:intergenic 5.0%
!! TTTATTAAAGATAATAAATA+TGG + chr1_1:59435858-59435877 Msa0032370:intron 5.0%
!! TTATTAAAGATAATAAATAT+GGG + chr1_1:59435859-59435878 Msa0032370:intron 5.0%
!! AAAAAAAAAATAATAATACA+AGG + chr1_1:59437013-59437032 Msa0032370:intron 5.0%
! CAACACATGAAGGCACATGG+TGG - chr1_1:59431906-59431925 None:intergenic 50.0%
! TTCTGCAGGATGGGAAGTAC+TGG + chr1_1:59432001-59432020 Msa0032370:intron 50.0%
! ATTTCCATCACTGGTGCTGG+GGG + chr1_1:59432097-59432116 Msa0032370:CDS 50.0%
AATCTTGCCGCTGATATGGG+TGG + chr1_1:59432298-59432317 Msa0032370:CDS 50.0%
ACCCATTCCACCCATATCAG+CGG - chr1_1:59432308-59432327 None:intergenic 50.0%
TTAGAGCCATGGCCAGATGA+TGG + chr1_1:59433942-59433961 Msa0032370:intron 50.0%
CACTTCCTTGTGCCATCATC+TGG - chr1_1:59433957-59433976 None:intergenic 50.0%
! GATGATGGCACAAGGAAGTG+AGG + chr1_1:59433957-59433976 Msa0032370:intron 50.0%
CAAGCATCAGACTTGCCTAG+AGG - chr1_1:59434012-59434031 None:intergenic 50.0%
CTCTAGGCAAGTCTGATGCT+TGG + chr1_1:59434010-59434029 Msa0032370:intron 50.0%
CATCTGGCATGGCCATAGAA+AGG + chr1_1:59434493-59434512 Msa0032370:intron 50.0%
TTTCTTCCAGGTGGGACACT+TGG - chr1_1:59435892-59435911 None:intergenic 50.0%
TTGACCAGGTAGTGAGTGGT+GGG - chr1_1:59437058-59437077 None:intergenic 50.0%
TTTGACCAGGTAGTGAGTGG+TGG - chr1_1:59437059-59437078 None:intergenic 50.0%
TGCTTTGACCAGGTAGTGAG+TGG - chr1_1:59437062-59437081 None:intergenic 50.0%
! GAATGATGGGGGACATGTGT+TGG - chr1_1:59437708-59437727 None:intergenic 50.0%
AAAACCCCCAGCACCAGTGA+TGG - chr1_1:59432104-59432123 None:intergenic 55.0%
TTATCGCGTCGCACTTAGCG+CGG + chr1_1:59432122-59432141 Msa0032370:CDS 55.0%
TGCCGCTGATATGGGTGGAA+TGG + chr1_1:59432303-59432322 Msa0032370:CDS 55.0%
GCCGCTGATATGGGTGGAAT+GGG + chr1_1:59432304-59432323 Msa0032370:CDS 55.0%
CTTGTGCCATCATCTGGCCA+TGG - chr1_1:59433951-59433970 None:intergenic 55.0%
! CATGGCCAGATGATGGCACA+AGG + chr1_1:59433949-59433968 Msa0032370:intron 55.0%
TAGAGTCCAAGTGTCCCACC+TGG + chr1_1:59435883-59435902 Msa0032370:intron 55.0%
AGTGTGCTTCACTCGCCAGT+TGG + chr1_1:59437782-59437801 Msa0032370:CDS 55.0%
GCGACGCATATTGGACCAAC+TGG - chr1_1:59437800-59437819 None:intergenic 55.0%
CTTAGCGCGGCGTCTCAAGA+AGG + chr1_1:59432135-59432154 Msa0032370:CDS 60.0%
AACCATGGCGTGTGCCCGAA+TGG + chr1_1:59435452-59435471 Msa0032370:intron 60.0%
TACCATTCGGGCACACGCCA+TGG - chr1_1:59435457-59435476 None:intergenic 60.0%
AACGCCCACCACTCACTACC+TGG + chr1_1:59437051-59437070 Msa0032370:intron 60.0%
CGTGTGAGCTGCAGACAGGA+AGG - chr1_1:59437750-59437769 None:intergenic 60.0%
CAGCTCACACGCTGCTGTCT+GGG + chr1_1:59437759-59437778 Msa0032370:intron 60.0%
GTCCAATATGCGTCGCCACG+TGG + chr1_1:59437804-59437823 Msa0032370:CDS 60.0%
TGCCACGTGGCGACGCATAT+TGG - chr1_1:59437809-59437828 None:intergenic 60.0%
TATGCGTCGCCACGTGGCAT+CGG + chr1_1:59437810-59437829 Msa0032370:CDS 60.0%
! GTGGCATCGGATGCGCAGTT+TGG + chr1_1:59437823-59437842 Msa0032370:CDS 60.0%
AGCGCGGCGTCTCAAGAAGG+AGG + chr1_1:59432138-59432157 Msa0032370:CDS 65.0%
GCGCGGCGTCTCAAGAAGGA+GGG + chr1_1:59432139-59432158 Msa0032370:CDS 65.0%
GCAGCGTGTGAGCTGCAGAC+AGG - chr1_1:59437754-59437773 None:intergenic 65.0%
GCAGCTCACACGCTGCTGTC+TGG + chr1_1:59437758-59437777 Msa0032370:intron 65.0%
ACTGCGCATCCGATGCCACG+TGG - chr1_1:59437822-59437841 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 59431082 59437858 59431082 ID=Msa0032370;Name=Msa0032370
chr1_1 mRNA 59431082 59437858 59431082 ID=Msa0032370-mRNA-1;Parent=Msa0032370;Name=Msa0032370-mRNA-1;_AED=0.07;_eAED=0.07;_QI=212|0.5|0.66|0.66|0.5|0.33|3|0|168
chr1_1 exon 59431082 59431292 59431082 ID=Msa0032370-mRNA-1:exon:18304;Parent=Msa0032370-mRNA-1
chr1_1 exon 59432009 59432419 59432009 ID=Msa0032370-mRNA-1:exon:18305;Parent=Msa0032370-mRNA-1
chr1_1 exon 59437762 59437858 59437762 ID=Msa0032370-mRNA-1:exon:18306;Parent=Msa0032370-mRNA-1
chr1_1 five_prime_UTR 59431082 59431292 59431082 ID=Msa0032370-mRNA-1:five_prime_utr;Parent=Msa0032370-mRNA-1
chr1_1 five_prime_UTR 59432009 59432009 59432009 ID=Msa0032370-mRNA-1:five_prime_utr;Parent=Msa0032370-mRNA-1
chr1_1 CDS 59432010 59432419 59432010 ID=Msa0032370-mRNA-1:cds;Parent=Msa0032370-mRNA-1
chr1_1 CDS 59437762 59437858 59437762 ID=Msa0032370-mRNA-1:cds;Parent=Msa0032370-mRNA-1
Gene Sequence

>Msa0032370

ATGGGAAGTACTGGAAAAACTAACTATGGAGAATACACCTATGAGAATCTTGAGAGAGAGCCTTACTGGCCATCAGAAAAGCTTAAAATTTCCATCACTGGTGCTGGGGGTTTTATCGCGTCGCACTTAGCGCGGCGTCTCAAGAAGGAGGGACATTACATTATTGCTTCTGACTGGAAGAAAAATGAGCACATGACTGAGGACATGTTCTGTGATGAATTCCATCTTGTTGATCTCAGGGTCATGGATAACTGCTTAACGGTTACTAAAGGGGTTGACCATGTTTTCAATCTTGCCGCTGATATGGGTGGAATGGGTTTTATTCAGTCCAATCATTCTGTTATTATGTATAACAACACAATGATTAGTTTCAATATGATTGAAGCTGCTAGGATTAATGGAATTAAGAGCTCACACGCTGCTGTCTGGGAGTGTGCTTCACTCGCCAGTTGGTCCAATATGCGTCGCCACGTGGCATCGGATGCGCAGTTTGGCAATTGTGTTTAA

Protein sequence

>Msa0032370

MGSTGKTNYGEYTYENLEREPYWPSEKLKISITGAGGFIASHLARRLKKEGHYIIASDWKKNEHMTEDMFCDEFHLVDLRVMDNCLTVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKSSHAAVWECASLASWSNMRRHVASDAQFGNCV*