AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1205270


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1205270 MtrunA17_Chr4g0054331 92.617 149 11 0 1 149 1 149 8.90e-98 290
Msa1205270 MtrunA17_Chr4g0054331 96.364 110 4 0 233 342 141 250 7.08e-74 229
Msa1205270 MtrunA17_Chr7g0263551 29.870 154 96 4 2 148 4 152 7.08e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1205270 AT5G65840.1 72.973 111 30 0 233 343 165 275 3.67e-54 179
Msa1205270 AT5G65840.1 68.269 104 30 1 49 149 70 173 2.33e-41 146

Find 97 sgRNAs with CRISPR-Local

Find 558 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTTGAAGGTATTAGATTT+TGG 0.154519 8_1:-61432858 None:intergenic
CTGTCATGTTCAAAGATCTT+TGG 0.216394 8_1:+61433000 Msa1205270:CDS
AGGGGTAAGTGTGTGAATTC+GGG 0.243170 8_1:-61432815 None:intergenic
TTTGTAATTTATACAGTTAT+TGG 0.247744 8_1:+61436664 Msa1205270:three_prime_UTR
GAGGGGTAAGTGTGTGAATT+CGG 0.256228 8_1:-61432816 None:intergenic
AGCAAGAATACGAGCTTTAT+TGG 0.271846 8_1:-61433913 None:intergenic
TACACTGGCTGGGTTGAAAA+AGG 0.282027 8_1:-61436026 None:intergenic
GCAAGAATACGAGCTTTATT+GGG 0.301563 8_1:-61433912 None:intergenic
CTGAAACCACATTCAGTTAC+TGG 0.306925 8_1:+61432616 None:intergenic
CAGAAAGAAGTCGTTTGTTT+CGG 0.314726 8_1:-61432896 None:intergenic
TTGTAAATTCGCTTAGCATT+AGG 0.320531 8_1:+61436517 Msa1205270:three_prime_UTR
TTTGACCTCTACTATGGATT+TGG 0.321070 8_1:+61435998 Msa1205270:CDS
TTGTAATTTATACAGTTATT+GGG 0.324930 8_1:+61436665 Msa1205270:three_prime_UTR
AGCTGCATCAAACCTTGATT+TGG 0.325737 8_1:-61433856 None:intergenic
GTCACACTCTCATCTATTCT+AGG 0.326199 8_1:+61432707 Msa1205270:five_prime_UTR
TGTAATATGCTGTGGATATA+TGG 0.335742 8_1:+61436604 Msa1205270:three_prime_UTR
TGTCATGTTCAAAGATCTTT+GGG 0.351307 8_1:+61433001 Msa1205270:CDS
TGTTCTTCTTAGTTGGGAAC+TGG 0.353355 8_1:+61433815 Msa1205270:intron
GGAGGGATGTTTGTGTTTAG+AGG 0.357019 8_1:+61436382 Msa1205270:CDS
AGAAAGAAGTCGTTTGTTTC+GGG 0.362238 8_1:-61432895 None:intergenic
TAGATGAGAGTGTGACTTGA+AGG 0.376711 8_1:-61432700 None:intergenic
GTTCAAAGATCTTTGGGATC+AGG 0.419236 8_1:+61433007 Msa1205270:CDS
TAAAGACAATCCATTGGAAA+TGG 0.422792 8_1:-61435859 None:intergenic
AAGGTAAAGCTTACACTGGC+TGG 0.424360 8_1:-61436037 None:intergenic
GCCTAGATTCTCTGCAATAG+TGG 0.432681 8_1:-61432946 None:intergenic
CTGCTGGAAGGATTCATTGC+GGG 0.437132 8_1:+61435072 Msa1205270:CDS
AGTGGGGATGTAGGTTGGAC+AGG 0.444490 8_1:+61435019 Msa1205270:CDS
ATACAGTACAGTTAAGCAAC+AGG 0.447939 8_1:-61436490 None:intergenic
CCGTGCATTACCTTACGGTC+AGG 0.448777 8_1:-61435889 None:intergenic
ATCATCCATACTGCTATCCT+TGG 0.453494 8_1:-61435683 None:intergenic
AGATCTTTGGGATCAGGAAC+AGG 0.458429 8_1:+61433013 Msa1205270:CDS
AATTGTATTCACAAGACTGC+TGG 0.459882 8_1:+61435056 Msa1205270:CDS
CTTGTATGATTCACAGTGAA+TGG 0.465733 8_1:-61436573 None:intergenic
CCCACTATTGCAGAGAATCT+AGG 0.467316 8_1:+61432945 Msa1205270:CDS
TTAAAGCCTCATAATTCCCT+AGG 0.467609 8_1:-61433989 None:intergenic
ATTTGCCAAGGATAGCAGTA+TGG 0.471309 8_1:+61435678 Msa1205270:CDS
CAGTGTTTGACTGTTTCCCT+AGG 0.482163 8_1:+61433972 Msa1205270:CDS
CATTGAAAGAATCCAAATCA+AGG 0.492034 8_1:+61433844 Msa1205270:CDS
GCCGATGAATGAAGATTTGA+AGG 0.493342 8_1:-61432871 None:intergenic
TGGGGTGTAGTGAATGGTAG+AGG 0.500971 8_1:-61432838 None:intergenic
GAGGGATGTTTGTGTTTAGA+GGG 0.508209 8_1:+61436383 Msa1205270:CDS
GTATCGTGGGTTCAGGAAGT+GGG 0.514756 8_1:+61435002 Msa1205270:intron
TGTTCAGTTACCATTTCCAA+TGG 0.515281 8_1:+61435849 Msa1205270:intron
TGTTTCCCTAGGGAATTATG+AGG 0.515650 8_1:+61433983 Msa1205270:CDS
AGTGTTTGACTGTTTCCCTA+GGG 0.517627 8_1:+61433973 Msa1205270:CDS
ACCTTCAAATCTTCATTCAT+CGG 0.522192 8_1:+61432870 Msa1205270:CDS
AAATCAAGGTTTGATGCAGC+TGG 0.524810 8_1:+61433858 Msa1205270:CDS
AAAACACCACTTCTATCATC+TGG 0.525139 8_1:-61436250 None:intergenic
TCAAAATCAGAACAAATCAA+TGG 0.525218 8_1:+61432743 Msa1205270:exon
CAGGAAGTGGGGATGTAGGT+TGG 0.525590 8_1:+61435014 Msa1205270:intron
CGTGCATTACCTTACGGTCA+GGG 0.525659 8_1:-61435888 None:intergenic
GTGGGGATGTAGGTTGGACA+GGG 0.539416 8_1:+61435020 Msa1205270:CDS
GGTTCAGGAAGTGGGGATGT+AGG 0.544894 8_1:+61435010 Msa1205270:intron
AAGCTAATTGCAGTGGGCGT+TGG 0.548964 8_1:+61433885 Msa1205270:CDS
GGGGTAAGTGTGTGAATTCG+GGG 0.552268 8_1:-61432814 None:intergenic
TTCTTCTTTCTTTGCCAGTG+AGG 0.554138 8_1:-61435124 None:intergenic
TAAAGCCTCATAATTCCCTA+GGG 0.554916 8_1:-61433988 None:intergenic
AGGTAAAGCTTACACTGGCT+GGG 0.557305 8_1:-61436036 None:intergenic
ATCGATGAACAGATCCTCAC+TGG 0.559993 8_1:+61435110 Msa1205270:CDS
TCACACTCTCATCTATTCTA+GGG 0.563225 8_1:+61432708 Msa1205270:five_prime_UTR
CAAAGAAAGAAGAATGTGGC+TGG 0.565162 8_1:+61435133 Msa1205270:CDS
TTATGCAGACCCTGACCGTA+AGG 0.565546 8_1:+61435879 Msa1205270:CDS
GGTGTGATAGATGGATGAAA+AGG 0.565786 8_1:-61432792 None:intergenic
AGATCATTAGTTACCAGCAT+GGG 0.566257 8_1:-61433721 None:intergenic
GGAAAGAGCTATTATATGCA+AGG 0.568553 8_1:+61436404 Msa1205270:CDS
CAAGAATACGAGCTTTATTG+GGG 0.569412 8_1:-61433911 None:intergenic
GTGTAGTGAATGGTAGAGGA+GGG 0.571659 8_1:-61432834 None:intergenic
CCTAGATTCTCTGCAATAGT+GGG 0.580863 8_1:-61432945 None:intergenic
GCAAGGAAAGACGAAGGCAC+AGG 0.589567 8_1:+61436421 Msa1205270:CDS
TCTGCATAAAGACAATCCAT+TGG 0.596451 8_1:-61435865 None:intergenic
TCTGTGTTGCAAATTTGCCA+AGG 0.610759 8_1:+61435666 Msa1205270:CDS
TGGTGTCAAGCTAATTGCAG+TGG 0.616794 8_1:+61433878 Msa1205270:CDS
GGTGTAGTGAATGGTAGAGG+AGG 0.617740 8_1:-61432835 None:intergenic
TGAAATGACAAAGGAGGACA+AGG 0.621292 8_1:-61433951 None:intergenic
ATTCTTACAGGGAATAGCTG+TGG 0.623503 8_1:+61433673 Msa1205270:intron
AGTGAGGATCTGTTCATCGA+TGG 0.624580 8_1:-61435108 None:intergenic
CTGGCAAAGAAAGAAGAATG+TGG 0.624811 8_1:+61435129 Msa1205270:CDS
AAGATCATTAGTTACCAGCA+TGG 0.626138 8_1:-61433722 None:intergenic
GCCACTCCAGATGATAGAAG+TGG 0.626798 8_1:+61436244 Msa1205270:CDS
GGTGTCAAGCTAATTGCAGT+GGG 0.627555 8_1:+61433879 Msa1205270:CDS
ACCACTTCTATCATCTGGAG+TGG 0.632768 8_1:-61436245 None:intergenic
TTCGGCCAAATCCATAGTAG+AGG 0.635276 8_1:-61436003 None:intergenic
GGGTAAGTGTGTGAATTCGG+GGG 0.635427 8_1:-61432813 None:intergenic
CTTACAGGGAATAGCTGTGG+TGG 0.639248 8_1:+61433676 Msa1205270:intron
GTCAAACACTGAAATGACAA+AGG 0.639779 8_1:-61433960 None:intergenic
TATCGTGGGTTCAGGAAGTG+GGG 0.643186 8_1:+61435003 Msa1205270:intron
GTATTCACAAGACTGCTGGA+AGG 0.643788 8_1:+61435060 Msa1205270:CDS
ACCACATTCAGTTACTGGCG+TGG 0.648313 8_1:+61432621 None:intergenic
TGTAGTGAATGGTAGAGGAG+GGG 0.653187 8_1:-61432833 None:intergenic
CCCGCCACTGAAAATATCCG+TGG 0.667448 8_1:+61432660 Msa1205270:five_prime_UTR
TAGCTGTGAAGAGAGAGCCA+CGG 0.678890 8_1:-61432677 None:intergenic
GGTTGGACAGGGAAAGACTG+TGG 0.680938 8_1:+61435031 Msa1205270:CDS
ATGCAACATGTAATATGCTG+TGG 0.686630 8_1:+61436596 Msa1205270:three_prime_UTR
AAACACTGAAATGACAAAGG+AGG 0.688107 8_1:-61433957 None:intergenic
TTATATGCAAGGAAAGACGA+AGG 0.699801 8_1:+61436415 Msa1205270:CDS
ACTGCTGGAAGGATTCATTG+CGG 0.724896 8_1:+61435071 Msa1205270:CDS
AAGAATACGAGCTTTATTGG+GGG 0.731789 8_1:-61433910 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGATAAAATAAAGTTAAAT+TGG + chr8_1:61433474-61433493 Msa1205270:intron 10.0%
!! TCTAAAAAACTTAAAATTAT+TGG - chr8_1:61435537-61435556 None:intergenic 10.0%
!! AAGATAAAATAAAGTTAAAT+TGG + chr8_1:61433474-61433493 Msa1205270:intron 10.0%
!! TCTAAAAAACTTAAAATTAT+TGG - chr8_1:61435537-61435556 None:intergenic 10.0%
!!! TTTTTACTCTTTAAATGTTT+TGG + chr8_1:61433070-61433089 Msa1205270:intron 15.0%
!!! TTTTACTCTTTAAATGTTTT+GGG + chr8_1:61433071-61433090 Msa1205270:intron 15.0%
!!! ACATCACAATTTTTTTTTTT+TGG + chr8_1:61433095-61433114 Msa1205270:intron 15.0%
!! GAATTGAAATTAATTTATTC+TGG + chr8_1:61433287-61433306 Msa1205270:intron 15.0%
!! ATTTATTATTTATCCAAGTA+AGG - chr8_1:61433397-61433416 None:intergenic 15.0%
!!! TTTTCTACTTTTCTTTATTA+AGG - chr8_1:61434529-61434548 None:intergenic 15.0%
!! CTATAATTAAAACTCATAAA+TGG - chr8_1:61435422-61435441 None:intergenic 15.0%
!! TAATTTACGCAATTATTATA+TGG + chr8_1:61435766-61435785 Msa1205270:intron 15.0%
!!! TAATATTTTACTTTACAACT+TGG + chr8_1:61436322-61436341 Msa1205270:intron 15.0%
!!! AATATTTTACTTTACAACTT+GGG + chr8_1:61436323-61436342 Msa1205270:intron 15.0%
!!! GTAAAGAATTTTATCAATTT+AGG - chr8_1:61436352-61436371 None:intergenic 15.0%
!! TTTGTAATTTATACAGTTAT+TGG + chr8_1:61436664-61436683 Msa1205270:three_prime_UTR 15.0%
!! TTGTAATTTATACAGTTATT+GGG + chr8_1:61436665-61436684 Msa1205270:three_prime_UTR 15.0%
!!! TTTTTACTCTTTAAATGTTT+TGG + chr8_1:61433070-61433089 Msa1205270:intron 15.0%
!!! TTTTACTCTTTAAATGTTTT+GGG + chr8_1:61433071-61433090 Msa1205270:intron 15.0%
!!! ACATCACAATTTTTTTTTTT+TGG + chr8_1:61433095-61433114 Msa1205270:intron 15.0%
!! GAATTGAAATTAATTTATTC+TGG + chr8_1:61433287-61433306 Msa1205270:intron 15.0%
!! ATTTATTATTTATCCAAGTA+AGG - chr8_1:61433397-61433416 None:intergenic 15.0%
!!! TTTTCTACTTTTCTTTATTA+AGG - chr8_1:61434529-61434548 None:intergenic 15.0%
!! CTATAATTAAAACTCATAAA+TGG - chr8_1:61435422-61435441 None:intergenic 15.0%
!! TAATTTACGCAATTATTATA+TGG + chr8_1:61435766-61435785 Msa1205270:intron 15.0%
!!! TAATATTTTACTTTACAACT+TGG + chr8_1:61436322-61436341 Msa1205270:intron 15.0%
!!! AATATTTTACTTTACAACTT+GGG + chr8_1:61436323-61436342 Msa1205270:intron 15.0%
!!! GTAAAGAATTTTATCAATTT+AGG - chr8_1:61436352-61436371 None:intergenic 15.0%
!! TTTGTAATTTATACAGTTAT+TGG + chr8_1:61436664-61436683 Msa1205270:three_prime_UTR 15.0%
!! TTGTAATTTATACAGTTATT+GGG + chr8_1:61436665-61436684 Msa1205270:three_prime_UTR 15.0%
!!! ATTTGAAGGTATTAGATTTT+GGG - chr8_1:61432860-61432879 None:intergenic 20.0%
!! TAAAGCAAAAACAACAATTT+AGG - chr8_1:61433122-61433141 None:intergenic 20.0%
!!! AAATTGTTGTTTTTGCTTTA+TGG + chr8_1:61433122-61433141 Msa1205270:intron 20.0%
!!! AATTAGTTGAAATTGATTTG+AGG + chr8_1:61433202-61433221 Msa1205270:intron 20.0%
!!! TAGTTGGAATTAATTCATTT+TGG + chr8_1:61433234-61433253 Msa1205270:intron 20.0%
!!! TAGTTAGTATCTATTTTGAT+TGG - chr8_1:61433606-61433625 None:intergenic 20.0%
!! TACTAACTAGTTGAATTAAT+AGG + chr8_1:61433617-61433636 Msa1205270:intron 20.0%
!!! TTAATTTGATGATACTAGAT+TGG - chr8_1:61434096-61434115 None:intergenic 20.0%
!! TATTATTGTAAGAAAAGACA+TGG + chr8_1:61434223-61434242 Msa1205270:intron 20.0%
!!! ATATATTTTAAAATGCAGTG+TGG - chr8_1:61434363-61434382 None:intergenic 20.0%
!! TTAATAGAAAAAGACTGAAT+TGG + chr8_1:61434382-61434401 Msa1205270:intron 20.0%
!!! CTTTGATATATTTGTTCTTT+TGG + chr8_1:61434472-61434491 Msa1205270:intron 20.0%
!!! TAATTTGTATATTGGCAATT+TGG - chr8_1:61434608-61434627 None:intergenic 20.0%
!! TTGAAAATATTTGTGAAAGA+TGG + chr8_1:61434760-61434779 Msa1205270:intron 20.0%
!!! CTTTTCATTCCTTTATTTTT+TGG - chr8_1:61434919-61434938 None:intergenic 20.0%
!! AAAAATAAAGGAATGAAAAG+TGG + chr8_1:61434919-61434938 Msa1205270:intron 20.0%
!! AAACTATACTAGTAACAATA+AGG - chr8_1:61434949-61434968 None:intergenic 20.0%
!!! ATTTGTGCATATTTTTCATA+AGG - chr8_1:61435250-61435269 None:intergenic 20.0%
!!! TTTTTGTTTCAAGTTATCTT+GGG + chr8_1:61435569-61435588 Msa1205270:intron 20.0%
!!! TTTTAAATTCACTTCATTGA+AGG + chr8_1:61435636-61435655 Msa1205270:intron 20.0%
!! TTTAAATTCACTTCATTGAA+GGG + chr8_1:61435637-61435656 Msa1205270:intron 20.0%
!!! AAAATTCTTTACATTTTGTC+AGG + chr8_1:61436360-61436379 Msa1205270:intron 20.0%
!!! AAATTCTTTACATTTTGTCA+GGG + chr8_1:61436361-61436380 Msa1205270:intron 20.0%
!!! ATTTGAAGGTATTAGATTTT+GGG - chr8_1:61432860-61432879 None:intergenic 20.0%
!! TAAAGCAAAAACAACAATTT+AGG - chr8_1:61433122-61433141 None:intergenic 20.0%
!!! AAATTGTTGTTTTTGCTTTA+TGG + chr8_1:61433122-61433141 Msa1205270:intron 20.0%
!!! AATTAGTTGAAATTGATTTG+AGG + chr8_1:61433202-61433221 Msa1205270:intron 20.0%
!!! TAGTTGGAATTAATTCATTT+TGG + chr8_1:61433234-61433253 Msa1205270:intron 20.0%
!!! TAGTTAGTATCTATTTTGAT+TGG - chr8_1:61433606-61433625 None:intergenic 20.0%
!! TACTAACTAGTTGAATTAAT+AGG + chr8_1:61433617-61433636 Msa1205270:intron 20.0%
!!! TTAATTTGATGATACTAGAT+TGG - chr8_1:61434096-61434115 None:intergenic 20.0%
!! TATTATTGTAAGAAAAGACA+TGG + chr8_1:61434223-61434242 Msa1205270:intron 20.0%
!!! ATATATTTTAAAATGCAGTG+TGG - chr8_1:61434363-61434382 None:intergenic 20.0%
!! TTAATAGAAAAAGACTGAAT+TGG + chr8_1:61434382-61434401 Msa1205270:intron 20.0%
!!! CTTTGATATATTTGTTCTTT+TGG + chr8_1:61434472-61434491 Msa1205270:intron 20.0%
!!! TAATTTGTATATTGGCAATT+TGG - chr8_1:61434608-61434627 None:intergenic 20.0%
!! TTGAAAATATTTGTGAAAGA+TGG + chr8_1:61434760-61434779 Msa1205270:intron 20.0%
!!! CTTTTCATTCCTTTATTTTT+TGG - chr8_1:61434919-61434938 None:intergenic 20.0%
!! AAAAATAAAGGAATGAAAAG+TGG + chr8_1:61434919-61434938 Msa1205270:intron 20.0%
!! AAACTATACTAGTAACAATA+AGG - chr8_1:61434949-61434968 None:intergenic 20.0%
!!! ATTTGTGCATATTTTTCATA+AGG - chr8_1:61435250-61435269 None:intergenic 20.0%
!!! TTTTTGTTTCAAGTTATCTT+GGG + chr8_1:61435569-61435588 Msa1205270:intron 20.0%
!!! TTTTAAATTCACTTCATTGA+AGG + chr8_1:61435636-61435655 Msa1205270:intron 20.0%
!! TTTAAATTCACTTCATTGAA+GGG + chr8_1:61435637-61435656 Msa1205270:intron 20.0%
!!! AAAATTCTTTACATTTTGTC+AGG + chr8_1:61436360-61436379 Msa1205270:intron 20.0%
!!! AAATTCTTTACATTTTGTCA+GGG + chr8_1:61436361-61436380 Msa1205270:intron 20.0%
! TCAAAATCAGAACAAATCAA+TGG + chr8_1:61432743-61432762 Msa1205270:exon 25.0%
!!! TTTGAAGGTATTAGATTTTG+GGG - chr8_1:61432859-61432878 None:intergenic 25.0%
!!! GATTTGAAGGTATTAGATTT+TGG - chr8_1:61432861-61432880 None:intergenic 25.0%
!!! TTTGAGGTTGATATATTAGT+TGG + chr8_1:61433218-61433237 Msa1205270:intron 25.0%
!!! AATAGGTTGATGTTAATATG+TGG + chr8_1:61433634-61433653 Msa1205270:intron 25.0%
! TGATTAGAGTTAATTCTTAC+AGG + chr8_1:61433661-61433680 Msa1205270:intron 25.0%
! GATTAGAGTTAATTCTTACA+GGG + chr8_1:61433662-61433681 Msa1205270:intron 25.0%
!! ATTAATAACCAAAAGCACAA+AGG - chr8_1:61433750-61433769 None:intergenic 25.0%
!!! TTGTGCTTTTGGTTATTAAT+CGG + chr8_1:61433750-61433769 Msa1205270:intron 25.0%
!! AATATACTTTTATGCTACAG+CGG - chr8_1:61434175-61434194 None:intergenic 25.0%
! ATAGATCTTTACAGTATCTT+CGG + chr8_1:61434498-61434517 Msa1205270:intron 25.0%
!!! TGTGTGCTTAATTTGTATAT+TGG - chr8_1:61434616-61434635 None:intergenic 25.0%
! AATATACAAATTAAGCACAC+AGG + chr8_1:61434615-61434634 Msa1205270:intron 25.0%
! ATATACAAATTAAGCACACA+GGG + chr8_1:61434616-61434635 Msa1205270:intron 25.0%
! AAATCCATTTCAATGACTTT+GGG + chr8_1:61434654-61434673 Msa1205270:intron 25.0%
! AAATATAAGTATGCCAATAG+TGG + chr8_1:61434700-61434719 Msa1205270:intron 25.0%
!! ATATTTTCAAATCACTGTCA+TGG - chr8_1:61434750-61434769 None:intergenic 25.0%
! AAACTTAAAATTATTGGCCA+TGG - chr8_1:61435531-61435550 None:intergenic 25.0%
!!! GTTTTTGTTTCAAGTTATCT+TGG + chr8_1:61435568-61435587 Msa1205270:intron 25.0%
!! AGTATGGATGATCATTTTAA+TGG + chr8_1:61435694-61435713 Msa1205270:CDS 25.0%
!!! GATGATCATTTTAATGGATA+TGG + chr8_1:61435700-61435719 Msa1205270:CDS 25.0%
!! CTGATATTTTCTTTTTCTAC+TGG + chr8_1:61435819-61435838 Msa1205270:intron 25.0%
!! TTTACAAAATGAGTTCTAGT+AGG - chr8_1:61435934-61435953 None:intergenic 25.0%
!!! AATTTTTTTGACCTCTACTA+TGG + chr8_1:61435992-61436011 Msa1205270:CDS 25.0%
! GACTTCAAAATGATATTAAC+AGG + chr8_1:61436162-61436181 Msa1205270:intron 25.0%
! AAAATGATATTAACAGGCAA+AGG + chr8_1:61436168-61436187 Msa1205270:intron 25.0%
! TCAAAATCAGAACAAATCAA+TGG + chr8_1:61432743-61432762 Msa1205270:exon 25.0%
!!! TTTGAAGGTATTAGATTTTG+GGG - chr8_1:61432859-61432878 None:intergenic 25.0%
!!! GATTTGAAGGTATTAGATTT+TGG - chr8_1:61432861-61432880 None:intergenic 25.0%
!!! TTTGAGGTTGATATATTAGT+TGG + chr8_1:61433218-61433237 Msa1205270:intron 25.0%
!!! AATAGGTTGATGTTAATATG+TGG + chr8_1:61433634-61433653 Msa1205270:intron 25.0%
! TGATTAGAGTTAATTCTTAC+AGG + chr8_1:61433661-61433680 Msa1205270:intron 25.0%
! GATTAGAGTTAATTCTTACA+GGG + chr8_1:61433662-61433681 Msa1205270:intron 25.0%
!! ATTAATAACCAAAAGCACAA+AGG - chr8_1:61433750-61433769 None:intergenic 25.0%
!!! TTGTGCTTTTGGTTATTAAT+CGG + chr8_1:61433750-61433769 Msa1205270:intron 25.0%
!! AATATACTTTTATGCTACAG+CGG - chr8_1:61434175-61434194 None:intergenic 25.0%
! ATAGATCTTTACAGTATCTT+CGG + chr8_1:61434498-61434517 Msa1205270:intron 25.0%
!!! TGTGTGCTTAATTTGTATAT+TGG - chr8_1:61434616-61434635 None:intergenic 25.0%
! AATATACAAATTAAGCACAC+AGG + chr8_1:61434615-61434634 Msa1205270:intron 25.0%
! ATATACAAATTAAGCACACA+GGG + chr8_1:61434616-61434635 Msa1205270:intron 25.0%
! AAATCCATTTCAATGACTTT+GGG + chr8_1:61434654-61434673 Msa1205270:intron 25.0%
! AAATATAAGTATGCCAATAG+TGG + chr8_1:61434700-61434719 Msa1205270:intron 25.0%
!! ATATTTTCAAATCACTGTCA+TGG - chr8_1:61434750-61434769 None:intergenic 25.0%
! AAACTTAAAATTATTGGCCA+TGG - chr8_1:61435531-61435550 None:intergenic 25.0%
!!! GTTTTTGTTTCAAGTTATCT+TGG + chr8_1:61435568-61435587 Msa1205270:intron 25.0%
!! AGTATGGATGATCATTTTAA+TGG + chr8_1:61435694-61435713 Msa1205270:CDS 25.0%
!!! GATGATCATTTTAATGGATA+TGG + chr8_1:61435700-61435719 Msa1205270:CDS 25.0%
!! CTGATATTTTCTTTTTCTAC+TGG + chr8_1:61435819-61435838 Msa1205270:intron 25.0%
!! TTTACAAAATGAGTTCTAGT+AGG - chr8_1:61435934-61435953 None:intergenic 25.0%
!!! AATTTTTTTGACCTCTACTA+TGG + chr8_1:61435992-61436011 Msa1205270:CDS 25.0%
! GACTTCAAAATGATATTAAC+AGG + chr8_1:61436162-61436181 Msa1205270:intron 25.0%
! AAAATGATATTAACAGGCAA+AGG + chr8_1:61436168-61436187 Msa1205270:intron 25.0%
ACCTTCAAATCTTCATTCAT+CGG + chr8_1:61432870-61432889 Msa1205270:CDS 30.0%
TGTCATGTTCAAAGATCTTT+GGG + chr8_1:61433001-61433020 Msa1205270:CDS 30.0%
TCAACACAACATTAACAAAC+AGG - chr8_1:61433169-61433188 None:intergenic 30.0%
! TTTGAAGTTGTATCAGATCA+AGG + chr8_1:61433371-61433390 Msa1205270:intron 30.0%
! AATAAGTTGAAACCAGCTTA+TGG + chr8_1:61433509-61433528 Msa1205270:intron 30.0%
!! TAAGTTTTGTGAGGCTATTT+GGG - chr8_1:61433559-61433578 None:intergenic 30.0%
!! ATAAGTTTTGTGAGGCTATT+TGG - chr8_1:61433560-61433579 None:intergenic 30.0%
!! TGTGCTTTTGGTTATTAATC+GGG + chr8_1:61433751-61433770 Msa1205270:intron 30.0%
CATTGAAAGAATCCAAATCA+AGG + chr8_1:61433844-61433863 Msa1205270:CDS 30.0%
! AGTCTGTCTTTGAGTATTTT+AGG + chr8_1:61434032-61434051 Msa1205270:intron 30.0%
! GTCTGTCTTTGAGTATTTTA+GGG + chr8_1:61434033-61434052 Msa1205270:intron 30.0%
!! TTACCTCTTTAGAGTAGTTT+CGG + chr8_1:61434060-61434079 Msa1205270:intron 30.0%
GAAATCCATTTCAATGACTT+TGG + chr8_1:61434653-61434672 Msa1205270:intron 30.0%
TTTACCCAAAGTCATTGAAA+TGG - chr8_1:61434661-61434680 None:intergenic 30.0%
TGAGTGAGACCAAAAAATAA+AGG + chr8_1:61434907-61434926 Msa1205270:intron 30.0%
! GTTACTAGTATAGTTTGTGA+TGG + chr8_1:61434953-61434972 Msa1205270:intron 30.0%
CATAAATGGCAAAAACAAAC+AGG - chr8_1:61435408-61435427 None:intergenic 30.0%
TAAAGACAATCCATTGGAAA+TGG - chr8_1:61435862-61435881 None:intergenic 30.0%
AAAATTGTATGCCTGAAAGA+AGG - chr8_1:61435978-61435997 None:intergenic 30.0%
! TTGTATTTCAGAAAAGTGCA+AGG - chr8_1:61436059-61436078 None:intergenic 30.0%
ATATTTACCAGCATGCAAAA+TGG - chr8_1:61436135-61436154 None:intergenic 30.0%
ATTTGATGCTTTGCAAAAAG+CGG + chr8_1:61436201-61436220 Msa1205270:CDS 30.0%
ACATCAAAAACATCGTCTAA+GGG - chr8_1:61436457-61436476 None:intergenic 30.0%
AACATCAAAAACATCGTCTA+AGG - chr8_1:61436458-61436477 None:intergenic 30.0%
TTGTAAATTCGCTTAGCATT+AGG + chr8_1:61436517-61436536 Msa1205270:three_prime_UTR 30.0%
TGTAATATGCTGTGGATATA+TGG + chr8_1:61436604-61436623 Msa1205270:three_prime_UTR 30.0%
ACCTTCAAATCTTCATTCAT+CGG + chr8_1:61432870-61432889 Msa1205270:CDS 30.0%
TGTCATGTTCAAAGATCTTT+GGG + chr8_1:61433001-61433020 Msa1205270:CDS 30.0%
TCAACACAACATTAACAAAC+AGG - chr8_1:61433169-61433188 None:intergenic 30.0%
! TTTGAAGTTGTATCAGATCA+AGG + chr8_1:61433371-61433390 Msa1205270:intron 30.0%
! AATAAGTTGAAACCAGCTTA+TGG + chr8_1:61433509-61433528 Msa1205270:intron 30.0%
!! TAAGTTTTGTGAGGCTATTT+GGG - chr8_1:61433559-61433578 None:intergenic 30.0%
!! ATAAGTTTTGTGAGGCTATT+TGG - chr8_1:61433560-61433579 None:intergenic 30.0%
!! TGTGCTTTTGGTTATTAATC+GGG + chr8_1:61433751-61433770 Msa1205270:intron 30.0%
CATTGAAAGAATCCAAATCA+AGG + chr8_1:61433844-61433863 Msa1205270:CDS 30.0%
! AGTCTGTCTTTGAGTATTTT+AGG + chr8_1:61434032-61434051 Msa1205270:intron 30.0%
! GTCTGTCTTTGAGTATTTTA+GGG + chr8_1:61434033-61434052 Msa1205270:intron 30.0%
!! TTACCTCTTTAGAGTAGTTT+CGG + chr8_1:61434060-61434079 Msa1205270:intron 30.0%
GAAATCCATTTCAATGACTT+TGG + chr8_1:61434653-61434672 Msa1205270:intron 30.0%
TTTACCCAAAGTCATTGAAA+TGG - chr8_1:61434661-61434680 None:intergenic 30.0%
TGAGTGAGACCAAAAAATAA+AGG + chr8_1:61434907-61434926 Msa1205270:intron 30.0%
! GTTACTAGTATAGTTTGTGA+TGG + chr8_1:61434953-61434972 Msa1205270:intron 30.0%
CATAAATGGCAAAAACAAAC+AGG - chr8_1:61435408-61435427 None:intergenic 30.0%
TAAAGACAATCCATTGGAAA+TGG - chr8_1:61435862-61435881 None:intergenic 30.0%
AAAATTGTATGCCTGAAAGA+AGG - chr8_1:61435978-61435997 None:intergenic 30.0%
! TTGTATTTCAGAAAAGTGCA+AGG - chr8_1:61436059-61436078 None:intergenic 30.0%
ATATTTACCAGCATGCAAAA+TGG - chr8_1:61436135-61436154 None:intergenic 30.0%
ATTTGATGCTTTGCAAAAAG+CGG + chr8_1:61436201-61436220 Msa1205270:CDS 30.0%
ACATCAAAAACATCGTCTAA+GGG - chr8_1:61436457-61436476 None:intergenic 30.0%
AACATCAAAAACATCGTCTA+AGG - chr8_1:61436458-61436477 None:intergenic 30.0%
TTGTAAATTCGCTTAGCATT+AGG + chr8_1:61436517-61436536 Msa1205270:three_prime_UTR 30.0%
TGTAATATGCTGTGGATATA+TGG + chr8_1:61436604-61436623 Msa1205270:three_prime_UTR 30.0%
TCACACTCTCATCTATTCTA+GGG + chr8_1:61432708-61432727 Msa1205270:five_prime_UTR 35.0%
AGAAAGAAGTCGTTTGTTTC+GGG - chr8_1:61432898-61432917 None:intergenic 35.0%
CAGAAAGAAGTCGTTTGTTT+CGG - chr8_1:61432899-61432918 None:intergenic 35.0%
! TTAGTATTTTCACTGCTGCT+GGG + chr8_1:61432973-61432992 Msa1205270:CDS 35.0%
CTGTCATGTTCAAAGATCTT+TGG + chr8_1:61433000-61433019 Msa1205270:CDS 35.0%
ACAACATTAACAAACAGGAG+GGG - chr8_1:61433164-61433183 None:intergenic 35.0%
CACAACATTAACAAACAGGA+GGG - chr8_1:61433165-61433184 None:intergenic 35.0%
ACACAACATTAACAAACAGG+AGG - chr8_1:61433166-61433185 None:intergenic 35.0%
GTCATACTTTACTTACCTAC+AGG - chr8_1:61433331-61433350 None:intergenic 35.0%
!! CTACTGACATAAGTTTTGTG+AGG - chr8_1:61433568-61433587 None:intergenic 35.0%
! GGTTGATGTTAATATGTGGT+TGG + chr8_1:61433638-61433657 Msa1205270:intron 35.0%
AGATCATTAGTTACCAGCAT+GGG - chr8_1:61433724-61433743 None:intergenic 35.0%
AAGATCATTAGTTACCAGCA+TGG - chr8_1:61433725-61433744 None:intergenic 35.0%
ACTGATAGTTGTTCTTACTG+TGG + chr8_1:61433783-61433802 Msa1205270:intron 35.0%
TGTCTTCTGTTCTTCTTAGT+TGG + chr8_1:61433808-61433827 Msa1205270:intron 35.0%
GTCTTCTGTTCTTCTTAGTT+GGG + chr8_1:61433809-61433828 Msa1205270:intron 35.0%
!! AAGAATACGAGCTTTATTGG+GGG - chr8_1:61433913-61433932 None:intergenic 35.0%
!! CAAGAATACGAGCTTTATTG+GGG - chr8_1:61433914-61433933 None:intergenic 35.0%
!! GCAAGAATACGAGCTTTATT+GGG - chr8_1:61433915-61433934 None:intergenic 35.0%
! AGCAAGAATACGAGCTTTAT+TGG - chr8_1:61433916-61433935 None:intergenic 35.0%
AAACACTGAAATGACAAAGG+AGG - chr8_1:61433960-61433979 None:intergenic 35.0%
GTCAAACACTGAAATGACAA+AGG - chr8_1:61433963-61433982 None:intergenic 35.0%
TAAAGCCTCATAATTCCCTA+GGG - chr8_1:61433991-61434010 None:intergenic 35.0%
TTAAAGCCTCATAATTCCCT+AGG - chr8_1:61433992-61434011 None:intergenic 35.0%
GATGAGCCAAAGTTGTTAAA+AGG + chr8_1:61434311-61434330 Msa1205270:intron 35.0%
! GAAGAGCCTTTTAACAACTT+TGG - chr8_1:61434320-61434339 None:intergenic 35.0%
GTTATGATTACACAAGTGTC+TGG - chr8_1:61434434-61434453 None:intergenic 35.0%
CTTATCCTTTGAACCACTAT+TGG - chr8_1:61434716-61434735 None:intergenic 35.0%
TTTCAAATCACTGTCATGGT+AGG - chr8_1:61434746-61434765 None:intergenic 35.0%
AGATGGAATGATTCTGACTT+AGG + chr8_1:61434777-61434796 Msa1205270:intron 35.0%
AATTGTATTCACAAGACTGC+TGG + chr8_1:61435056-61435075 Msa1205270:CDS 35.0%
AAATGACAGATCCATATGGT+GGG + chr8_1:61435266-61435285 Msa1205270:intron 35.0%
! TACCAATTTGGAACAATCAG+TGG + chr8_1:61435375-61435394 Msa1205270:intron 35.0%
AAAAAGAGGTAAGTCGTACA+TGG - chr8_1:61435493-61435512 None:intergenic 35.0%
! ATGTACGACTTACCTCTTTT+TGG + chr8_1:61435492-61435511 Msa1205270:intron 35.0%
TCAAGTTATCTTGGGTTACT+AGG + chr8_1:61435577-61435596 Msa1205270:intron 35.0%
TCAAGTATATTCTGCCTCAA+CGG + chr8_1:61435601-61435620 Msa1205270:intron 35.0%
AATTAAACCACAAACCGTTG+AGG - chr8_1:61435618-61435637 None:intergenic 35.0%
TGTTCAGTTACCATTTCCAA+TGG + chr8_1:61435849-61435868 Msa1205270:intron 35.0%
TCTGCATAAAGACAATCCAT+TGG - chr8_1:61435868-61435887 None:intergenic 35.0%
TTTGACCTCTACTATGGATT+TGG + chr8_1:61435998-61436017 Msa1205270:CDS 35.0%
! ACAATTTCCATTTTGCATGC+TGG + chr8_1:61436125-61436144 Msa1205270:intron 35.0%
TTTGCATGCTGGTAAATATG+TGG + chr8_1:61436136-61436155 Msa1205270:intron 35.0%
AAAACACCACTTCTATCATC+TGG - chr8_1:61436253-61436272 None:intergenic 35.0%
GCAGGTTTGATACATTAATC+TGG + chr8_1:61436276-61436295 Msa1205270:intron 35.0%
GGTTTGATACATTAATCTGG+TGG + chr8_1:61436279-61436298 Msa1205270:intron 35.0%
! TTCTTTACATTTTGTCAGGG+AGG + chr8_1:61436364-61436383 Msa1205270:intron 35.0%
! TCTTTACATTTTGTCAGGGA+GGG + chr8_1:61436365-61436384 Msa1205270:intron 35.0%
GGAAAGAGCTATTATATGCA+AGG + chr8_1:61436404-61436423 Msa1205270:CDS 35.0%
TTATATGCAAGGAAAGACGA+AGG + chr8_1:61436415-61436434 Msa1205270:CDS 35.0%
ATCAAAAACATCGTCTAAGG+GGG - chr8_1:61436455-61436474 None:intergenic 35.0%
CATCAAAAACATCGTCTAAG+GGG - chr8_1:61436456-61436475 None:intergenic 35.0%
ATACAGTACAGTTAAGCAAC+AGG - chr8_1:61436493-61436512 None:intergenic 35.0%
CTTGTATGATTCACAGTGAA+TGG - chr8_1:61436576-61436595 None:intergenic 35.0%
ATGCAACATGTAATATGCTG+TGG + chr8_1:61436596-61436615 Msa1205270:three_prime_UTR 35.0%
TCACACTCTCATCTATTCTA+GGG + chr8_1:61432708-61432727 Msa1205270:five_prime_UTR 35.0%
AGAAAGAAGTCGTTTGTTTC+GGG - chr8_1:61432898-61432917 None:intergenic 35.0%
CAGAAAGAAGTCGTTTGTTT+CGG - chr8_1:61432899-61432918 None:intergenic 35.0%
! TTAGTATTTTCACTGCTGCT+GGG + chr8_1:61432973-61432992 Msa1205270:CDS 35.0%
CTGTCATGTTCAAAGATCTT+TGG + chr8_1:61433000-61433019 Msa1205270:CDS 35.0%
ACAACATTAACAAACAGGAG+GGG - chr8_1:61433164-61433183 None:intergenic 35.0%
CACAACATTAACAAACAGGA+GGG - chr8_1:61433165-61433184 None:intergenic 35.0%
ACACAACATTAACAAACAGG+AGG - chr8_1:61433166-61433185 None:intergenic 35.0%
GTCATACTTTACTTACCTAC+AGG - chr8_1:61433331-61433350 None:intergenic 35.0%
!! CTACTGACATAAGTTTTGTG+AGG - chr8_1:61433568-61433587 None:intergenic 35.0%
! GGTTGATGTTAATATGTGGT+TGG + chr8_1:61433638-61433657 Msa1205270:intron 35.0%
AGATCATTAGTTACCAGCAT+GGG - chr8_1:61433724-61433743 None:intergenic 35.0%
AAGATCATTAGTTACCAGCA+TGG - chr8_1:61433725-61433744 None:intergenic 35.0%
ACTGATAGTTGTTCTTACTG+TGG + chr8_1:61433783-61433802 Msa1205270:intron 35.0%
TGTCTTCTGTTCTTCTTAGT+TGG + chr8_1:61433808-61433827 Msa1205270:intron 35.0%
GTCTTCTGTTCTTCTTAGTT+GGG + chr8_1:61433809-61433828 Msa1205270:intron 35.0%
!! AAGAATACGAGCTTTATTGG+GGG - chr8_1:61433913-61433932 None:intergenic 35.0%
!! CAAGAATACGAGCTTTATTG+GGG - chr8_1:61433914-61433933 None:intergenic 35.0%
!! GCAAGAATACGAGCTTTATT+GGG - chr8_1:61433915-61433934 None:intergenic 35.0%
! AGCAAGAATACGAGCTTTAT+TGG - chr8_1:61433916-61433935 None:intergenic 35.0%
AAACACTGAAATGACAAAGG+AGG - chr8_1:61433960-61433979 None:intergenic 35.0%
GTCAAACACTGAAATGACAA+AGG - chr8_1:61433963-61433982 None:intergenic 35.0%
TAAAGCCTCATAATTCCCTA+GGG - chr8_1:61433991-61434010 None:intergenic 35.0%
TTAAAGCCTCATAATTCCCT+AGG - chr8_1:61433992-61434011 None:intergenic 35.0%
GATGAGCCAAAGTTGTTAAA+AGG + chr8_1:61434311-61434330 Msa1205270:intron 35.0%
! GAAGAGCCTTTTAACAACTT+TGG - chr8_1:61434320-61434339 None:intergenic 35.0%
GTTATGATTACACAAGTGTC+TGG - chr8_1:61434434-61434453 None:intergenic 35.0%
CTTATCCTTTGAACCACTAT+TGG - chr8_1:61434716-61434735 None:intergenic 35.0%
TTTCAAATCACTGTCATGGT+AGG - chr8_1:61434746-61434765 None:intergenic 35.0%
AGATGGAATGATTCTGACTT+AGG + chr8_1:61434777-61434796 Msa1205270:intron 35.0%
AATTGTATTCACAAGACTGC+TGG + chr8_1:61435056-61435075 Msa1205270:CDS 35.0%
AAATGACAGATCCATATGGT+GGG + chr8_1:61435266-61435285 Msa1205270:intron 35.0%
! TACCAATTTGGAACAATCAG+TGG + chr8_1:61435375-61435394 Msa1205270:intron 35.0%
AAAAAGAGGTAAGTCGTACA+TGG - chr8_1:61435493-61435512 None:intergenic 35.0%
! ATGTACGACTTACCTCTTTT+TGG + chr8_1:61435492-61435511 Msa1205270:intron 35.0%
TCAAGTTATCTTGGGTTACT+AGG + chr8_1:61435577-61435596 Msa1205270:intron 35.0%
TCAAGTATATTCTGCCTCAA+CGG + chr8_1:61435601-61435620 Msa1205270:intron 35.0%
AATTAAACCACAAACCGTTG+AGG - chr8_1:61435618-61435637 None:intergenic 35.0%
TGTTCAGTTACCATTTCCAA+TGG + chr8_1:61435849-61435868 Msa1205270:intron 35.0%
TCTGCATAAAGACAATCCAT+TGG - chr8_1:61435868-61435887 None:intergenic 35.0%
TTTGACCTCTACTATGGATT+TGG + chr8_1:61435998-61436017 Msa1205270:CDS 35.0%
! ACAATTTCCATTTTGCATGC+TGG + chr8_1:61436125-61436144 Msa1205270:intron 35.0%
TTTGCATGCTGGTAAATATG+TGG + chr8_1:61436136-61436155 Msa1205270:intron 35.0%
AAAACACCACTTCTATCATC+TGG - chr8_1:61436253-61436272 None:intergenic 35.0%
GCAGGTTTGATACATTAATC+TGG + chr8_1:61436276-61436295 Msa1205270:intron 35.0%
GGTTTGATACATTAATCTGG+TGG + chr8_1:61436279-61436298 Msa1205270:intron 35.0%
! TTCTTTACATTTTGTCAGGG+AGG + chr8_1:61436364-61436383 Msa1205270:intron 35.0%
! TCTTTACATTTTGTCAGGGA+GGG + chr8_1:61436365-61436384 Msa1205270:intron 35.0%
GGAAAGAGCTATTATATGCA+AGG + chr8_1:61436404-61436423 Msa1205270:CDS 35.0%
TTATATGCAAGGAAAGACGA+AGG + chr8_1:61436415-61436434 Msa1205270:CDS 35.0%
ATCAAAAACATCGTCTAAGG+GGG - chr8_1:61436455-61436474 None:intergenic 35.0%
CATCAAAAACATCGTCTAAG+GGG - chr8_1:61436456-61436475 None:intergenic 35.0%
ATACAGTACAGTTAAGCAAC+AGG - chr8_1:61436493-61436512 None:intergenic 35.0%
CTTGTATGATTCACAGTGAA+TGG - chr8_1:61436576-61436595 None:intergenic 35.0%
ATGCAACATGTAATATGCTG+TGG + chr8_1:61436596-61436615 Msa1205270:three_prime_UTR 35.0%
! TAGATGAGAGTGTGACTTGA+AGG - chr8_1:61432703-61432722 None:intergenic 40.0%
GTCACACTCTCATCTATTCT+AGG + chr8_1:61432707-61432726 Msa1205270:five_prime_UTR 40.0%
GGTGTGATAGATGGATGAAA+AGG - chr8_1:61432795-61432814 None:intergenic 40.0%
!!! AGATTTTGGGGTGTAGTGAA+TGG - chr8_1:61432847-61432866 None:intergenic 40.0%
GCCGATGAATGAAGATTTGA+AGG - chr8_1:61432874-61432893 None:intergenic 40.0%
CCTAGATTCTCTGCAATAGT+GGG - chr8_1:61432948-61432967 None:intergenic 40.0%
! GTTAGTATTTTCACTGCTGC+TGG + chr8_1:61432972-61432991 Msa1205270:CDS 40.0%
! TAGTATTTTCACTGCTGCTG+GGG + chr8_1:61432974-61432993 Msa1205270:CDS 40.0%
!! GTTCAAAGATCTTTGGGATC+AGG + chr8_1:61433007-61433026 Msa1205270:CDS 40.0%
! TCTGGTGTTAACCTAGTGTT+TGG + chr8_1:61433305-61433324 Msa1205270:intron 40.0%
TATCAGATCAAGGCCTTACT+TGG + chr8_1:61433381-61433400 Msa1205270:intron 40.0%
AACAGACATTGTCCATAAGC+TGG - chr8_1:61433524-61433543 None:intergenic 40.0%
ATTCTTACAGGGAATAGCTG+TGG + chr8_1:61433673-61433692 Msa1205270:intron 40.0%
!!! GTGGCACTTTTAAGGCATTT+TGG + chr8_1:61433695-61433714 Msa1205270:CDS 40.0%
! GATCTTTGCCTTTGTGCTTT+TGG + chr8_1:61433739-61433758 Msa1205270:intron 40.0%
TGTTCTTCTTAGTTGGGAAC+TGG + chr8_1:61433815-61433834 Msa1205270:intron 40.0%
AGCTGCATCAAACCTTGATT+TGG - chr8_1:61433859-61433878 None:intergenic 40.0%
AAATCAAGGTTTGATGCAGC+TGG + chr8_1:61433858-61433877 Msa1205270:CDS 40.0%
TGAAATGACAAAGGAGGACA+AGG - chr8_1:61433954-61433973 None:intergenic 40.0%
AGTGTTTGACTGTTTCCCTA+GGG + chr8_1:61433973-61433992 Msa1205270:CDS 40.0%
TGTTTCCCTAGGGAATTATG+AGG + chr8_1:61433983-61434002 Msa1205270:CDS 40.0%
!! CTCTTTAGAGTAGTTTCGGA+CGG + chr8_1:61434064-61434083 Msa1205270:intron 40.0%
ACAAATTAAGCACACAGGGA+AGG + chr8_1:61434620-61434639 Msa1205270:intron 40.0%
GTATGCCAATAGTGGTTCAA+AGG + chr8_1:61434708-61434727 Msa1205270:intron 40.0%
AACACTAAAGAGCCTGATGA+TGG - chr8_1:61434832-61434851 None:intergenic 40.0%
TTCTTCTTTCTTTGCCAGTG+AGG - chr8_1:61435127-61435146 None:intergenic 40.0%
CTGGCAAAGAAAGAAGAATG+TGG + chr8_1:61435129-61435148 Msa1205270:CDS 40.0%
CAAAGAAAGAAGAATGTGGC+TGG + chr8_1:61435133-61435152 Msa1205270:CDS 40.0%
GCACAAATGACAGATCCATA+TGG + chr8_1:61435262-61435281 Msa1205270:intron 40.0%
CAAATGACAGATCCATATGG+TGG + chr8_1:61435265-61435284 Msa1205270:intron 40.0%
AACTCACAGAAACTTCCTCT+TGG - chr8_1:61435334-61435353 None:intergenic 40.0%
! CAGGGTAGGTTTTACCAATT+TGG + chr8_1:61435363-61435382 Msa1205270:intron 40.0%
! AGCCACTGATTGTTCCAAAT+TGG - chr8_1:61435380-61435399 None:intergenic 40.0%
!! GACTTACCTCTTTTTGGTGA+AGG + chr8_1:61435498-61435517 Msa1205270:intron 40.0%
!! TACCTCTTTTTGGTGAAGGT+AGG + chr8_1:61435502-61435521 Msa1205270:intron 40.0%
TTCCTACCTTCACCAAAAAG+AGG - chr8_1:61435507-61435526 None:intergenic 40.0%
TCTGTGTTGCAAATTTGCCA+AGG + chr8_1:61435666-61435685 Msa1205270:CDS 40.0%
ATTTGCCAAGGATAGCAGTA+TGG + chr8_1:61435678-61435697 Msa1205270:CDS 40.0%
ATCATCCATACTGCTATCCT+TGG - chr8_1:61435686-61435705 None:intergenic 40.0%
GATATCCGTGCATTACCTTA+CGG - chr8_1:61435897-61435916 None:intergenic 40.0%
AACCAATTTCGCCTTCTTTC+AGG + chr8_1:61435964-61435983 Msa1205270:intron 40.0%
GAGGGATGTTTGTGTTTAGA+GGG + chr8_1:61436383-61436402 Msa1205270:CDS 40.0%
! TAGATGAGAGTGTGACTTGA+AGG - chr8_1:61432703-61432722 None:intergenic 40.0%
GTCACACTCTCATCTATTCT+AGG + chr8_1:61432707-61432726 Msa1205270:five_prime_UTR 40.0%
GGTGTGATAGATGGATGAAA+AGG - chr8_1:61432795-61432814 None:intergenic 40.0%
!!! AGATTTTGGGGTGTAGTGAA+TGG - chr8_1:61432847-61432866 None:intergenic 40.0%
GCCGATGAATGAAGATTTGA+AGG - chr8_1:61432874-61432893 None:intergenic 40.0%
CCTAGATTCTCTGCAATAGT+GGG - chr8_1:61432948-61432967 None:intergenic 40.0%
! GTTAGTATTTTCACTGCTGC+TGG + chr8_1:61432972-61432991 Msa1205270:CDS 40.0%
! TAGTATTTTCACTGCTGCTG+GGG + chr8_1:61432974-61432993 Msa1205270:CDS 40.0%
!! GTTCAAAGATCTTTGGGATC+AGG + chr8_1:61433007-61433026 Msa1205270:CDS 40.0%
! TCTGGTGTTAACCTAGTGTT+TGG + chr8_1:61433305-61433324 Msa1205270:intron 40.0%
TATCAGATCAAGGCCTTACT+TGG + chr8_1:61433381-61433400 Msa1205270:intron 40.0%
AACAGACATTGTCCATAAGC+TGG - chr8_1:61433524-61433543 None:intergenic 40.0%
ATTCTTACAGGGAATAGCTG+TGG + chr8_1:61433673-61433692 Msa1205270:intron 40.0%
!!! GTGGCACTTTTAAGGCATTT+TGG + chr8_1:61433695-61433714 Msa1205270:CDS 40.0%
! GATCTTTGCCTTTGTGCTTT+TGG + chr8_1:61433739-61433758 Msa1205270:intron 40.0%
TGTTCTTCTTAGTTGGGAAC+TGG + chr8_1:61433815-61433834 Msa1205270:intron 40.0%
AGCTGCATCAAACCTTGATT+TGG - chr8_1:61433859-61433878 None:intergenic 40.0%
AAATCAAGGTTTGATGCAGC+TGG + chr8_1:61433858-61433877 Msa1205270:CDS 40.0%
TGAAATGACAAAGGAGGACA+AGG - chr8_1:61433954-61433973 None:intergenic 40.0%
AGTGTTTGACTGTTTCCCTA+GGG + chr8_1:61433973-61433992 Msa1205270:CDS 40.0%
TGTTTCCCTAGGGAATTATG+AGG + chr8_1:61433983-61434002 Msa1205270:CDS 40.0%
!! CTCTTTAGAGTAGTTTCGGA+CGG + chr8_1:61434064-61434083 Msa1205270:intron 40.0%
ACAAATTAAGCACACAGGGA+AGG + chr8_1:61434620-61434639 Msa1205270:intron 40.0%
GTATGCCAATAGTGGTTCAA+AGG + chr8_1:61434708-61434727 Msa1205270:intron 40.0%
AACACTAAAGAGCCTGATGA+TGG - chr8_1:61434832-61434851 None:intergenic 40.0%
TTCTTCTTTCTTTGCCAGTG+AGG - chr8_1:61435127-61435146 None:intergenic 40.0%
CTGGCAAAGAAAGAAGAATG+TGG + chr8_1:61435129-61435148 Msa1205270:CDS 40.0%
CAAAGAAAGAAGAATGTGGC+TGG + chr8_1:61435133-61435152 Msa1205270:CDS 40.0%
GCACAAATGACAGATCCATA+TGG + chr8_1:61435262-61435281 Msa1205270:intron 40.0%
CAAATGACAGATCCATATGG+TGG + chr8_1:61435265-61435284 Msa1205270:intron 40.0%
AACTCACAGAAACTTCCTCT+TGG - chr8_1:61435334-61435353 None:intergenic 40.0%
! CAGGGTAGGTTTTACCAATT+TGG + chr8_1:61435363-61435382 Msa1205270:intron 40.0%
! AGCCACTGATTGTTCCAAAT+TGG - chr8_1:61435380-61435399 None:intergenic 40.0%
!! GACTTACCTCTTTTTGGTGA+AGG + chr8_1:61435498-61435517 Msa1205270:intron 40.0%
!! TACCTCTTTTTGGTGAAGGT+AGG + chr8_1:61435502-61435521 Msa1205270:intron 40.0%
TTCCTACCTTCACCAAAAAG+AGG - chr8_1:61435507-61435526 None:intergenic 40.0%
TCTGTGTTGCAAATTTGCCA+AGG + chr8_1:61435666-61435685 Msa1205270:CDS 40.0%
ATTTGCCAAGGATAGCAGTA+TGG + chr8_1:61435678-61435697 Msa1205270:CDS 40.0%
ATCATCCATACTGCTATCCT+TGG - chr8_1:61435686-61435705 None:intergenic 40.0%
GATATCCGTGCATTACCTTA+CGG - chr8_1:61435897-61435916 None:intergenic 40.0%
AACCAATTTCGCCTTCTTTC+AGG + chr8_1:61435964-61435983 Msa1205270:intron 40.0%
GAGGGATGTTTGTGTTTAGA+GGG + chr8_1:61436383-61436402 Msa1205270:CDS 40.0%
! AGAGCCACGGATATTTTCAG+TGG - chr8_1:61432667-61432686 None:intergenic 45.0%
AGGGGTAAGTGTGTGAATTC+GGG - chr8_1:61432818-61432837 None:intergenic 45.0%
GAGGGGTAAGTGTGTGAATT+CGG - chr8_1:61432819-61432838 None:intergenic 45.0%
TGTAGTGAATGGTAGAGGAG+GGG - chr8_1:61432836-61432855 None:intergenic 45.0%
GTGTAGTGAATGGTAGAGGA+GGG - chr8_1:61432837-61432856 None:intergenic 45.0%
CCCACTATTGCAGAGAATCT+AGG + chr8_1:61432945-61432964 Msa1205270:CDS 45.0%
GCCTAGATTCTCTGCAATAG+TGG - chr8_1:61432949-61432968 None:intergenic 45.0%
!! AGATCTTTGGGATCAGGAAC+AGG + chr8_1:61433013-61433032 Msa1205270:CDS 45.0%
TAACCTAGTGTTTGGCCTGT+AGG + chr8_1:61433313-61433332 Msa1205270:intron 45.0%
TTACCTACAGGCCAAACACT+AGG - chr8_1:61433319-61433338 None:intergenic 45.0%
! TAGCTGTGGTGGCACTTTTA+AGG + chr8_1:61433687-61433706 Msa1205270:CDS 45.0%
! TGGTGTCAAGCTAATTGCAG+TGG + chr8_1:61433878-61433897 Msa1205270:CDS 45.0%
GGTGTCAAGCTAATTGCAGT+GGG + chr8_1:61433879-61433898 Msa1205270:CDS 45.0%
CAGTGTTTGACTGTTTCCCT+AGG + chr8_1:61433972-61433991 Msa1205270:CDS 45.0%
! CGTCCGAAACTACTCTAAAG+AGG - chr8_1:61434066-61434085 None:intergenic 45.0%
! CTTTTATGCTACAGCGGTGA+AGG - chr8_1:61434169-61434188 None:intergenic 45.0%
AACATTTGACTCACGAGCCT+TGG + chr8_1:61434260-61434279 Msa1205270:intron 45.0%
TCTTGCAAAAGCTCTTGCCA+AGG - chr8_1:61434280-61434299 None:intergenic 45.0%
AGCACACAGGGAAGGAATAA+AGG + chr8_1:61434628-61434647 Msa1205270:intron 45.0%
!! AAGAGCCTGATGATGGTTAC+AGG - chr8_1:61434825-61434844 None:intergenic 45.0%
GCTAAGTGTTCAACCAAGTG+AGG + chr8_1:61434980-61434999 Msa1205270:intron 45.0%
!! TTCAACCAAGTGAGGTATCG+TGG + chr8_1:61434988-61435007 Msa1205270:intron 45.0%
!! TCAACCAAGTGAGGTATCGT+GGG + chr8_1:61434989-61435008 Msa1205270:intron 45.0%
GTATTCACAAGACTGCTGGA+AGG + chr8_1:61435060-61435079 Msa1205270:CDS 45.0%
ACTGCTGGAAGGATTCATTG+CGG + chr8_1:61435071-61435090 Msa1205270:CDS 45.0%
AGTGAGGATCTGTTCATCGA+TGG - chr8_1:61435111-61435130 None:intergenic 45.0%
ATCGATGAACAGATCCTCAC+TGG + chr8_1:61435110-61435129 Msa1205270:CDS 45.0%
ATCAGCAAGGGAGATGACAT+GGG + chr8_1:61435183-61435202 Msa1205270:intron 45.0%
! TCTGTGAGTTGAAGAGATGC+AGG + chr8_1:61435344-61435363 Msa1205270:intron 45.0%
! CTGTGAGTTGAAGAGATGCA+GGG + chr8_1:61435345-61435364 Msa1205270:intron 45.0%
TTGGTGAAGGTAGGAATCCA+TGG + chr8_1:61435511-61435530 Msa1205270:intron 45.0%
TATTCTGCCTCAACGGTTTG+TGG + chr8_1:61435608-61435627 Msa1205270:intron 45.0%
TGCCTGAAAGAAGGCGAAAT+TGG - chr8_1:61435969-61435988 None:intergenic 45.0%
TTCGGCCAAATCCATAGTAG+AGG - chr8_1:61436006-61436025 None:intergenic 45.0%
! TGGCTGGGTTGAAAAAGGTT+CGG - chr8_1:61436024-61436043 None:intergenic 45.0%
! TACACTGGCTGGGTTGAAAA+AGG - chr8_1:61436029-61436048 None:intergenic 45.0%
! AGGTAAAGCTTACACTGGCT+GGG - chr8_1:61436039-61436058 None:intergenic 45.0%
AAGGTAAAGCTTACACTGGC+TGG - chr8_1:61436040-61436059 None:intergenic 45.0%
GTGCAAGGTAAAGCTTACAC+TGG - chr8_1:61436044-61436063 None:intergenic 45.0%
ACCACTTCTATCATCTGGAG+TGG - chr8_1:61436248-61436267 None:intergenic 45.0%
! TAGAAGTGGTGTTTTGCAGC+AGG + chr8_1:61436258-61436277 Msa1205270:CDS 45.0%
GGAGGGATGTTTGTGTTTAG+AGG + chr8_1:61436382-61436401 Msa1205270:CDS 45.0%
! AGAGCCACGGATATTTTCAG+TGG - chr8_1:61432667-61432686 None:intergenic 45.0%
AGGGGTAAGTGTGTGAATTC+GGG - chr8_1:61432818-61432837 None:intergenic 45.0%
GAGGGGTAAGTGTGTGAATT+CGG - chr8_1:61432819-61432838 None:intergenic 45.0%
TGTAGTGAATGGTAGAGGAG+GGG - chr8_1:61432836-61432855 None:intergenic 45.0%
GTGTAGTGAATGGTAGAGGA+GGG - chr8_1:61432837-61432856 None:intergenic 45.0%
CCCACTATTGCAGAGAATCT+AGG + chr8_1:61432945-61432964 Msa1205270:CDS 45.0%
GCCTAGATTCTCTGCAATAG+TGG - chr8_1:61432949-61432968 None:intergenic 45.0%
!! AGATCTTTGGGATCAGGAAC+AGG + chr8_1:61433013-61433032 Msa1205270:CDS 45.0%
TAACCTAGTGTTTGGCCTGT+AGG + chr8_1:61433313-61433332 Msa1205270:intron 45.0%
TTACCTACAGGCCAAACACT+AGG - chr8_1:61433319-61433338 None:intergenic 45.0%
! TAGCTGTGGTGGCACTTTTA+AGG + chr8_1:61433687-61433706 Msa1205270:CDS 45.0%
! TGGTGTCAAGCTAATTGCAG+TGG + chr8_1:61433878-61433897 Msa1205270:CDS 45.0%
GGTGTCAAGCTAATTGCAGT+GGG + chr8_1:61433879-61433898 Msa1205270:CDS 45.0%
CAGTGTTTGACTGTTTCCCT+AGG + chr8_1:61433972-61433991 Msa1205270:CDS 45.0%
! CGTCCGAAACTACTCTAAAG+AGG - chr8_1:61434066-61434085 None:intergenic 45.0%
! CTTTTATGCTACAGCGGTGA+AGG - chr8_1:61434169-61434188 None:intergenic 45.0%
AACATTTGACTCACGAGCCT+TGG + chr8_1:61434260-61434279 Msa1205270:intron 45.0%
TCTTGCAAAAGCTCTTGCCA+AGG - chr8_1:61434280-61434299 None:intergenic 45.0%
AGCACACAGGGAAGGAATAA+AGG + chr8_1:61434628-61434647 Msa1205270:intron 45.0%
!! AAGAGCCTGATGATGGTTAC+AGG - chr8_1:61434825-61434844 None:intergenic 45.0%
GCTAAGTGTTCAACCAAGTG+AGG + chr8_1:61434980-61434999 Msa1205270:intron 45.0%
!! TTCAACCAAGTGAGGTATCG+TGG + chr8_1:61434988-61435007 Msa1205270:intron 45.0%
!! TCAACCAAGTGAGGTATCGT+GGG + chr8_1:61434989-61435008 Msa1205270:intron 45.0%
GTATTCACAAGACTGCTGGA+AGG + chr8_1:61435060-61435079 Msa1205270:CDS 45.0%
ACTGCTGGAAGGATTCATTG+CGG + chr8_1:61435071-61435090 Msa1205270:CDS 45.0%
AGTGAGGATCTGTTCATCGA+TGG - chr8_1:61435111-61435130 None:intergenic 45.0%
ATCGATGAACAGATCCTCAC+TGG + chr8_1:61435110-61435129 Msa1205270:CDS 45.0%
ATCAGCAAGGGAGATGACAT+GGG + chr8_1:61435183-61435202 Msa1205270:intron 45.0%
! TCTGTGAGTTGAAGAGATGC+AGG + chr8_1:61435344-61435363 Msa1205270:intron 45.0%
! CTGTGAGTTGAAGAGATGCA+GGG + chr8_1:61435345-61435364 Msa1205270:intron 45.0%
TTGGTGAAGGTAGGAATCCA+TGG + chr8_1:61435511-61435530 Msa1205270:intron 45.0%
TATTCTGCCTCAACGGTTTG+TGG + chr8_1:61435608-61435627 Msa1205270:intron 45.0%
TGCCTGAAAGAAGGCGAAAT+TGG - chr8_1:61435969-61435988 None:intergenic 45.0%
TTCGGCCAAATCCATAGTAG+AGG - chr8_1:61436006-61436025 None:intergenic 45.0%
! TGGCTGGGTTGAAAAAGGTT+CGG - chr8_1:61436024-61436043 None:intergenic 45.0%
! TACACTGGCTGGGTTGAAAA+AGG - chr8_1:61436029-61436048 None:intergenic 45.0%
! AGGTAAAGCTTACACTGGCT+GGG - chr8_1:61436039-61436058 None:intergenic 45.0%
AAGGTAAAGCTTACACTGGC+TGG - chr8_1:61436040-61436059 None:intergenic 45.0%
GTGCAAGGTAAAGCTTACAC+TGG - chr8_1:61436044-61436063 None:intergenic 45.0%
ACCACTTCTATCATCTGGAG+TGG - chr8_1:61436248-61436267 None:intergenic 45.0%
! TAGAAGTGGTGTTTTGCAGC+AGG + chr8_1:61436258-61436277 Msa1205270:CDS 45.0%
GGAGGGATGTTTGTGTTTAG+AGG + chr8_1:61436382-61436401 Msa1205270:CDS 45.0%
!! GATATTTTCAGTGGCGGGAG+AGG - chr8_1:61432658-61432677 None:intergenic 50.0%
! CCACGGATATTTTCAGTGGC+GGG - chr8_1:61432663-61432682 None:intergenic 50.0%
! GCCACGGATATTTTCAGTGG+CGG - chr8_1:61432664-61432683 None:intergenic 50.0%
TAGCTGTGAAGAGAGAGCCA+CGG - chr8_1:61432680-61432699 None:intergenic 50.0%
! GAATTCGGGGGTGTGATAGA+TGG - chr8_1:61432804-61432823 None:intergenic 50.0%
GGGTAAGTGTGTGAATTCGG+GGG - chr8_1:61432816-61432835 None:intergenic 50.0%
GGGGTAAGTGTGTGAATTCG+GGG - chr8_1:61432817-61432836 None:intergenic 50.0%
GGTGTAGTGAATGGTAGAGG+AGG - chr8_1:61432838-61432857 None:intergenic 50.0%
TGGGGTGTAGTGAATGGTAG+AGG - chr8_1:61432841-61432860 None:intergenic 50.0%
GGATCAGGAACAGGTCAGAA+TGG + chr8_1:61433022-61433041 Msa1205270:intron 50.0%
CTTACAGGGAATAGCTGTGG+TGG + chr8_1:61433676-61433695 Msa1205270:intron 50.0%
AAGCTAATTGCAGTGGGCGT+TGG + chr8_1:61433885-61433904 Msa1205270:CDS 50.0%
! CAACTTTGGCTCATCAGCTG+TGG - chr8_1:61434306-61434325 None:intergenic 50.0%
AGCAGCCTGTAACCATCATC+AGG + chr8_1:61434817-61434836 Msa1205270:intron 50.0%
TGAACCCACGATACCTCACT+TGG - chr8_1:61434996-61435015 None:intergenic 50.0%
!! AAGTGAGGTATCGTGGGTTC+AGG + chr8_1:61434995-61435014 Msa1205270:intron 50.0%
GTATCGTGGGTTCAGGAAGT+GGG + chr8_1:61435002-61435021 Msa1205270:intron 50.0%
TATCGTGGGTTCAGGAAGTG+GGG + chr8_1:61435003-61435022 Msa1205270:intron 50.0%
CTGCTGGAAGGATTCATTGC+GGG + chr8_1:61435072-61435091 Msa1205270:CDS 50.0%
AGCGTGATCCTCATCAGCAA+GGG + chr8_1:61435171-61435190 Msa1205270:intron 50.0%
TGTCATCTCCCTTGCTGATG+AGG - chr8_1:61435182-61435201 None:intergenic 50.0%
CATCAGCAAGGGAGATGACA+TGG + chr8_1:61435182-61435201 Msa1205270:intron 50.0%
! TGACAGATCCATATGGTGGG+TGG + chr8_1:61435269-61435288 Msa1205270:intron 50.0%
AGGAAGGGTTTGCCTTTGTG+AGG + chr8_1:61435301-61435320 Msa1205270:intron 50.0%
GGAAGGGTTTGCCTTTGTGA+GGG + chr8_1:61435302-61435321 Msa1205270:intron 50.0%
GAGTTGAAGAGATGCAGGGT+AGG + chr8_1:61435349-61435368 Msa1205270:intron 50.0%
TTATGCAGACCCTGACCGTA+AGG + chr8_1:61435879-61435898 Msa1205270:CDS 50.0%
CGTGCATTACCTTACGGTCA+GGG - chr8_1:61435891-61435910 None:intergenic 50.0%
CCTGACCGTAAGGTAATGCA+CGG + chr8_1:61435889-61435908 Msa1205270:intron 50.0%
GCCACTCCAGATGATAGAAG+TGG + chr8_1:61436244-61436263 Msa1205270:CDS 50.0%
!! GATATTTTCAGTGGCGGGAG+AGG - chr8_1:61432658-61432677 None:intergenic 50.0%
! CCACGGATATTTTCAGTGGC+GGG - chr8_1:61432663-61432682 None:intergenic 50.0%
! GCCACGGATATTTTCAGTGG+CGG - chr8_1:61432664-61432683 None:intergenic 50.0%
TAGCTGTGAAGAGAGAGCCA+CGG - chr8_1:61432680-61432699 None:intergenic 50.0%
! GAATTCGGGGGTGTGATAGA+TGG - chr8_1:61432804-61432823 None:intergenic 50.0%
GGGTAAGTGTGTGAATTCGG+GGG - chr8_1:61432816-61432835 None:intergenic 50.0%
GGGGTAAGTGTGTGAATTCG+GGG - chr8_1:61432817-61432836 None:intergenic 50.0%
GGTGTAGTGAATGGTAGAGG+AGG - chr8_1:61432838-61432857 None:intergenic 50.0%
TGGGGTGTAGTGAATGGTAG+AGG - chr8_1:61432841-61432860 None:intergenic 50.0%
GGATCAGGAACAGGTCAGAA+TGG + chr8_1:61433022-61433041 Msa1205270:intron 50.0%
CTTACAGGGAATAGCTGTGG+TGG + chr8_1:61433676-61433695 Msa1205270:intron 50.0%
AAGCTAATTGCAGTGGGCGT+TGG + chr8_1:61433885-61433904 Msa1205270:CDS 50.0%
! CAACTTTGGCTCATCAGCTG+TGG - chr8_1:61434306-61434325 None:intergenic 50.0%
AGCAGCCTGTAACCATCATC+AGG + chr8_1:61434817-61434836 Msa1205270:intron 50.0%
TGAACCCACGATACCTCACT+TGG - chr8_1:61434996-61435015 None:intergenic 50.0%
!! AAGTGAGGTATCGTGGGTTC+AGG + chr8_1:61434995-61435014 Msa1205270:intron 50.0%
GTATCGTGGGTTCAGGAAGT+GGG + chr8_1:61435002-61435021 Msa1205270:intron 50.0%
TATCGTGGGTTCAGGAAGTG+GGG + chr8_1:61435003-61435022 Msa1205270:intron 50.0%
CTGCTGGAAGGATTCATTGC+GGG + chr8_1:61435072-61435091 Msa1205270:CDS 50.0%
AGCGTGATCCTCATCAGCAA+GGG + chr8_1:61435171-61435190 Msa1205270:intron 50.0%
TGTCATCTCCCTTGCTGATG+AGG - chr8_1:61435182-61435201 None:intergenic 50.0%
CATCAGCAAGGGAGATGACA+TGG + chr8_1:61435182-61435201 Msa1205270:intron 50.0%
! TGACAGATCCATATGGTGGG+TGG + chr8_1:61435269-61435288 Msa1205270:intron 50.0%
AGGAAGGGTTTGCCTTTGTG+AGG + chr8_1:61435301-61435320 Msa1205270:intron 50.0%
GGAAGGGTTTGCCTTTGTGA+GGG + chr8_1:61435302-61435321 Msa1205270:intron 50.0%
GAGTTGAAGAGATGCAGGGT+AGG + chr8_1:61435349-61435368 Msa1205270:intron 50.0%
TTATGCAGACCCTGACCGTA+AGG + chr8_1:61435879-61435898 Msa1205270:CDS 50.0%
CGTGCATTACCTTACGGTCA+GGG - chr8_1:61435891-61435910 None:intergenic 50.0%
CCTGACCGTAAGGTAATGCA+CGG + chr8_1:61435889-61435908 Msa1205270:intron 50.0%
GCCACTCCAGATGATAGAAG+TGG + chr8_1:61436244-61436263 Msa1205270:CDS 50.0%
CCCGCCACTGAAAATATCCG+TGG + chr8_1:61432660-61432679 Msa1205270:five_prime_UTR 55.0%
! GGCATTTTGGATGCCCATGC+TGG + chr8_1:61433708-61433727 Msa1205270:CDS 55.0%
ACAGGCTGCTGAAGCTGACA+AGG - chr8_1:61434807-61434826 None:intergenic 55.0%
GGTATCGTGGGTTCAGGAAG+TGG + chr8_1:61435001-61435020 Msa1205270:intron 55.0%
GGTTCAGGAAGTGGGGATGT+AGG + chr8_1:61435010-61435029 Msa1205270:intron 55.0%
CAGGAAGTGGGGATGTAGGT+TGG + chr8_1:61435014-61435033 Msa1205270:intron 55.0%
! AGTGGGGATGTAGGTTGGAC+AGG + chr8_1:61435019-61435038 Msa1205270:CDS 55.0%
! GTGGGGATGTAGGTTGGACA+GGG + chr8_1:61435020-61435039 Msa1205270:CDS 55.0%
GGTTGGACAGGGAAAGACTG+TGG + chr8_1:61435031-61435050 Msa1205270:CDS 55.0%
CAGCGTGATCCTCATCAGCA+AGG + chr8_1:61435170-61435189 Msa1205270:intron 55.0%
GACACACTCCACCCACCATA+TGG - chr8_1:61435280-61435299 None:intergenic 55.0%
AGGGTTTGCCTTTGTGAGGG+AGG + chr8_1:61435305-61435324 Msa1205270:intron 55.0%
GTTTGCCTTTGTGAGGGAGG+TGG + chr8_1:61435308-61435327 Msa1205270:intron 55.0%
CCGTGCATTACCTTACGGTC+AGG - chr8_1:61435892-61435911 None:intergenic 55.0%
! GCAAGGAAAGACGAAGGCAC+AGG + chr8_1:61436421-61436440 Msa1205270:CDS 55.0%
CCCGCCACTGAAAATATCCG+TGG + chr8_1:61432660-61432679 Msa1205270:five_prime_UTR 55.0%
! GGCATTTTGGATGCCCATGC+TGG + chr8_1:61433708-61433727 Msa1205270:CDS 55.0%
ACAGGCTGCTGAAGCTGACA+AGG - chr8_1:61434807-61434826 None:intergenic 55.0%
GGTATCGTGGGTTCAGGAAG+TGG + chr8_1:61435001-61435020 Msa1205270:intron 55.0%
GGTTCAGGAAGTGGGGATGT+AGG + chr8_1:61435010-61435029 Msa1205270:intron 55.0%
CAGGAAGTGGGGATGTAGGT+TGG + chr8_1:61435014-61435033 Msa1205270:intron 55.0%
! AGTGGGGATGTAGGTTGGAC+AGG + chr8_1:61435019-61435038 Msa1205270:CDS 55.0%
! GTGGGGATGTAGGTTGGACA+GGG + chr8_1:61435020-61435039 Msa1205270:CDS 55.0%
GGTTGGACAGGGAAAGACTG+TGG + chr8_1:61435031-61435050 Msa1205270:CDS 55.0%
CAGCGTGATCCTCATCAGCA+AGG + chr8_1:61435170-61435189 Msa1205270:intron 55.0%
GACACACTCCACCCACCATA+TGG - chr8_1:61435280-61435299 None:intergenic 55.0%
AGGGTTTGCCTTTGTGAGGG+AGG + chr8_1:61435305-61435324 Msa1205270:intron 55.0%
GTTTGCCTTTGTGAGGGAGG+TGG + chr8_1:61435308-61435327 Msa1205270:intron 55.0%
CCGTGCATTACCTTACGGTC+AGG - chr8_1:61435892-61435911 None:intergenic 55.0%
! GCAAGGAAAGACGAAGGCAC+AGG + chr8_1:61436421-61436440 Msa1205270:CDS 55.0%
!! ATGGTGGGTGGAGTGTGTCG+AGG + chr8_1:61435281-61435300 Msa1205270:intron 60.0%
TGGGTGGAGTGTGTCGAGGA+AGG + chr8_1:61435285-61435304 Msa1205270:intron 60.0%
GGGTGGAGTGTGTCGAGGAA+GGG + chr8_1:61435286-61435305 Msa1205270:intron 60.0%
CTTGGCCACCTCCCTCACAA+AGG - chr8_1:61435316-61435335 None:intergenic 60.0%
TTGTGAGGGAGGTGGCCAAG+AGG + chr8_1:61435316-61435335 Msa1205270:intron 60.0%
!! ATGGTGGGTGGAGTGTGTCG+AGG + chr8_1:61435281-61435300 Msa1205270:intron 60.0%
TGGGTGGAGTGTGTCGAGGA+AGG + chr8_1:61435285-61435304 Msa1205270:intron 60.0%
GGGTGGAGTGTGTCGAGGAA+GGG + chr8_1:61435286-61435305 Msa1205270:intron 60.0%
CTTGGCCACCTCCCTCACAA+AGG - chr8_1:61435316-61435335 None:intergenic 60.0%
TTGTGAGGGAGGTGGCCAAG+AGG + chr8_1:61435316-61435335 Msa1205270:intron 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 61432627 61436735 61432627 ID=Msa1205270;Name=Msa1205270
chr8_1 mRNA 61432627 61436735 61432627 ID=Msa1205270-mRNA-1;Parent=Msa1205270;Name=Msa1205270-mRNA-1;_AED=0.28;_eAED=0.28;_QI=135|0.62|0.66|0.77|1|1|9|234|343
chr8_1 exon 61432627 61433034 61432627 ID=Msa1205270-mRNA-1:exon:19956;Parent=Msa1205270-mRNA-1
chr8_1 exon 61433683 61433729 61433683 ID=Msa1205270-mRNA-1:exon:19957;Parent=Msa1205270-mRNA-1
chr8_1 exon 61433827 61434015 61433827 ID=Msa1205270-mRNA-1:exon:19958;Parent=Msa1205270-mRNA-1
chr8_1 exon 61435017 61435154 61435017 ID=Msa1205270-mRNA-1:exon:19959;Parent=Msa1205270-mRNA-1
chr8_1 exon 61435658 61435721 61435658 ID=Msa1205270-mRNA-1:exon:19960;Parent=Msa1205270-mRNA-1
chr8_1 exon 61435856 61435900 61435856 ID=Msa1205270-mRNA-1:exon:19961;Parent=Msa1205270-mRNA-1
chr8_1 exon 61435986 61436045 61435986 ID=Msa1205270-mRNA-1:exon:19962;Parent=Msa1205270-mRNA-1
chr8_1 exon 61436184 61436279 61436184 ID=Msa1205270-mRNA-1:exon:19963;Parent=Msa1205270-mRNA-1
chr8_1 exon 61436382 61436735 61436382 ID=Msa1205270-mRNA-1:exon:19964;Parent=Msa1205270-mRNA-1
chr8_1 five_prime_UTR 61432627 61432761 61432627 ID=Msa1205270-mRNA-1:five_prime_utr;Parent=Msa1205270-mRNA-1
chr8_1 CDS 61432762 61433034 61432762 ID=Msa1205270-mRNA-1:cds;Parent=Msa1205270-mRNA-1
chr8_1 CDS 61433683 61433729 61433683 ID=Msa1205270-mRNA-1:cds;Parent=Msa1205270-mRNA-1
chr8_1 CDS 61433827 61434015 61433827 ID=Msa1205270-mRNA-1:cds;Parent=Msa1205270-mRNA-1
chr8_1 CDS 61435017 61435154 61435017 ID=Msa1205270-mRNA-1:cds;Parent=Msa1205270-mRNA-1
chr8_1 CDS 61435658 61435721 61435658 ID=Msa1205270-mRNA-1:cds;Parent=Msa1205270-mRNA-1
chr8_1 CDS 61435856 61435900 61435856 ID=Msa1205270-mRNA-1:cds;Parent=Msa1205270-mRNA-1
chr8_1 CDS 61435986 61436045 61435986 ID=Msa1205270-mRNA-1:cds;Parent=Msa1205270-mRNA-1
chr8_1 CDS 61436184 61436279 61436184 ID=Msa1205270-mRNA-1:cds;Parent=Msa1205270-mRNA-1
chr8_1 CDS 61436382 61436501 61436382 ID=Msa1205270-mRNA-1:cds;Parent=Msa1205270-mRNA-1
chr8_1 three_prime_UTR 61436502 61436735 61436502 ID=Msa1205270-mRNA-1:three_prime_utr;Parent=Msa1205270-mRNA-1
Gene Sequence

>Msa1205270

ATGGCAACAACTCTACAATCTCTTCGATTTCCTTTTCATCCATCTATCACACCCCCGAATTCACACACTTACCCCTCCTCTACCATTCACTACACCCCAAAATCTAATACCTTCAAATCTTCATTCATCGGCACCCGAAACAAACGACTTCTTTCTGCTAGAGCTTCGAGTTCACAGTATAGTCCCACTATTGCAGAGAATCTAGGCGATGTTAGTATTTTCACTGCTGCTGGGGAATCTGTCATGTTCAAAGATCTTTGGGATCAGGAACAGGGAATAGCTGTGGTGGCACTTTTAAGGCATTTTGGATGCCCATGCTGTTGGGAACTGGCTTCAACATTGAAAGAATCCAAATCAAGGTTTGATGCAGCTGGTGTCAAGCTAATTGCAGTGGGCGTTGGTGCCCCCAATAAAGCTCGTATTCTTGCTGAACGAGTAATGTTTCCTTGTCCTCCTTTGTCATTTCAGTGTTTGACTGTTTCCCTAGGGAATTATGAGGCTTTAAAAGAGAAGTGGGGATGTAGGTTGGACAGGGAAAGACTGTGGAAAATTGTATTCACAAGACTGCTGGAAGGATTCATTGCGGGTGAGATCAGTGTGCCATCGATGAACAGATCCTCACTGGCAAAGAAAGAAGAATGTGGCTGGGTCACTATCTGTGTTGCAAATTTGCCAAGGATAGCAGTATGGATGATCATTTTAATGGATATGTTACCATTTCCAATGGATTGTCTTTATGCAGACCCTGACCGTAAGGCATACAATTTTTTTGACCTCTACTATGGATTTGGCCGAACCTTTTTCAACCCAGCCAGTGCAAAGGTGTTATCGAGATTTGATGCTTTGCAAAAAGCGGTCAAGAACTATACAATAGAAGCCACTCCAGATGATAGAAGTGGTGTTTTGCAGCAGGGAGGGATGTTTGTGTTTAGAGGGAAAGAGCTATTATATGCAAGGAAAGACGAAGGCACAGGTGATCATGCCCCCTTAGACGATGTTTTTGATGTTTGCTGCAAAGTGCCTGTTGCTTAA

Protein sequence

>Msa1205270

MATTLQSLRFPFHPSITPPNSHTYPSSTIHYTPKSNTFKSSFIGTRNKRLLSARASSSQYSPTIAENLGDVSIFTAAGESVMFKDLWDQEQGIAVVALLRHFGCPCCWELASTLKESKSRFDAAGVKLIAVGVGAPNKARILAERVMFPCPPLSFQCLTVSLGNYEALKEKWGCRLDRERLWKIVFTRLLEGFIAGEISVPSMNRSSLAKKEECGWVTICVANLPRIAVWMIILMDMLPFPMDCLYADPDRKAYNFFDLYYGFGRTFFNPASAKVLSRFDALQKAVKNYTIEATPDDRSGVLQQGGMFVFRGKELLYARKDEGTGDHAPLDDVFDVCCKVPVA*