AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1191270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1191270 MtrunA17_Chr8g0349341 92.329 365 26 1 1 363 1 365 0.0 681
Msa1191270 MtrunA17_Chr8g0349321 78.082 365 78 1 1 363 1 365 0.0 593
Msa1191270 MtrunA17_Chr8g0349331 76.860 363 54 2 1 363 1 333 0.0 565
Msa1191270 MtrunA17_Chr8g0349301 82.132 319 54 2 1 317 1 318 0.0 527
Msa1191270 MtrunA17_Chr8g0344931 57.771 341 128 4 28 362 30 360 2.31e-129 375
Msa1191270 MtrunA17_Chr8g0344941 50.689 363 167 7 10 362 15 375 1.41e-118 348
Msa1191270 MtrunA17_Chr2g0301641 50.000 334 159 4 35 361 43 375 9.88e-108 321
Msa1191270 MtrunA17_Chr8g0341001 35.077 325 186 10 35 344 32 346 2.27e-54 182
Msa1191270 MtrunA17_Chr3g0105401 32.923 325 193 9 35 344 28 342 2.50e-52 177
Msa1191270 MtrunA17_Chr1g0189931 35.294 340 198 9 35 361 32 362 4.51e-52 177
Msa1191270 MtrunA17_Chr5g0444401 33.687 377 215 12 1 360 1 359 6.13e-52 176
Msa1191270 MtrunA17_Chr3g0077571 32.295 353 220 5 19 362 14 356 7.69e-52 176
Msa1191270 MtrunA17_Chr5g0438631 33.618 351 209 10 7 344 3 342 3.77e-51 174
Msa1191270 MtrunA17_Chr4g0046151 34.593 344 193 11 10 334 16 346 1.96e-50 172
Msa1191270 MtrunA17_Chr1g0189891 32.520 369 214 12 10 361 4 354 3.21e-50 172
Msa1191270 MtrunA17_Chr1g0189901 33.623 345 205 10 30 361 28 361 5.02e-49 169
Msa1191270 MtrunA17_Chr3g0120861 33.851 322 193 9 35 344 38 351 8.38e-49 168
Msa1191270 MtrunA17_Chr7g0275011 32.941 340 206 9 35 361 34 364 1.24e-48 168
Msa1191270 MtrunA17_Chr3g0086641 31.956 363 221 10 1 347 1 353 1.50e-48 167
Msa1191270 MtrunA17_Chr5g0438621 33.939 330 197 10 28 344 22 343 1.54e-48 167
Msa1191270 MtrunA17_Chr7g0275021 31.492 362 222 10 13 361 16 364 9.58e-48 165
Msa1191270 MtrunA17_Chr2g0294301 30.994 342 213 8 35 362 35 367 1.45e-47 165
Msa1191270 MtrunA17_Chr3g0092131 32.075 318 194 7 37 341 25 333 1.57e-47 165
Msa1191270 MtrunA17_Chr2g0330781 32.036 334 202 10 35 353 31 354 2.41e-47 164
Msa1191270 MtrunA17_Chr2g0320671 31.250 352 204 12 10 342 9 341 5.93e-47 163
Msa1191270 MtrunA17_Chr7g0274991 29.891 368 229 9 11 361 8 363 6.70e-47 163
Msa1191270 MtrunA17_Chr4g0068441 30.904 343 214 9 35 363 35 368 7.43e-47 163
Msa1191270 MtrunA17_Chr7g0275001 30.914 372 225 9 3 361 4 356 1.44e-46 162
Msa1191270 MtrunA17_Chr1g0156901 31.728 353 209 11 10 344 29 367 2.35e-46 162
Msa1191270 MtrunA17_Chr5g0405821 29.915 351 224 9 7 345 19 359 2.46e-46 162
Msa1191270 MtrunA17_Chr2g0283191 32.861 353 203 11 7 336 11 352 4.36e-46 161
Msa1191270 MtrunA17_Chr1g0182811 31.871 342 207 9 35 360 33 364 4.95e-46 161
Msa1191270 MtrunA17_Chr5g0405831 33.229 319 192 9 35 340 43 353 7.48e-46 160
Msa1191270 MtrunA17_Chr2g0294311 29.787 376 225 11 9 362 14 372 9.03e-46 160
Msa1191270 MtrunA17_Chr4g0027521 30.523 344 219 8 9 341 6 340 1.12e-45 159
Msa1191270 MtrunA17_Chr4g0060811 30.556 324 203 7 34 344 26 340 1.20e-45 160
Msa1191270 MtrunA17_Chr3g0099161 31.778 343 208 8 35 361 92 424 1.64e-45 161
Msa1191270 MtrunA17_Chr8g0371491 32.704 318 196 9 35 341 36 346 2.42e-45 159
Msa1191270 MtrunA17_Chr3g0099231 30.688 378 228 11 1 362 1 360 2.70e-45 159
Msa1191270 MtrunA17_Chr5g0438641 32.298 322 198 9 35 344 32 345 3.12e-45 158
Msa1191270 MtrunA17_Chr1g0156891 32.853 347 206 11 3 335 14 347 5.72e-45 158
Msa1191270 MtrunA17_Chr1g0156931 32.571 350 212 10 1 338 9 346 6.25e-45 158
Msa1191270 MtrunA17_Chr1g0156911 31.420 331 197 11 35 346 37 356 1.28e-44 157
Msa1191270 MtrunA17_Chr1g0156921 33.238 349 200 13 11 340 18 352 2.67e-44 156
Msa1191270 MtrunA17_Chr4g0008851 31.594 345 212 9 32 361 29 364 1.23e-43 154
Msa1191270 MtrunA17_Chr8g0380041 32.198 323 198 8 37 347 33 346 1.14e-42 152
Msa1191270 MtrunA17_Chr7g0215961 30.435 368 220 12 7 361 6 350 1.17e-42 152
Msa1191270 MtrunA17_Chr5g0432101 30.172 348 221 9 11 344 9 348 1.47e-42 152
Msa1191270 MtrunA17_Chr5g0434621 30.028 353 210 12 11 346 6 338 1.83e-42 151
Msa1191270 MtrunA17_Chr8g0374101 29.243 383 239 12 1 362 4 375 3.04e-42 151
Msa1191270 MtrunA17_Chr3g0077581 30.994 342 208 9 36 360 37 367 3.34e-42 150
Msa1191270 MtrunA17_Chr5g0396511 29.080 337 218 9 37 360 48 376 5.28e-42 150
Msa1191270 MtrunA17_Chr2g0285061 28.571 357 218 9 19 355 16 355 2.34e-41 148
Msa1191270 MtrunA17_Chr8g0370981 30.976 410 216 14 8 360 17 416 2.36e-41 149
Msa1191270 MtrunA17_Chr3g0131321 29.759 373 236 9 9 363 5 369 2.65e-41 149
Msa1191270 MtrunA17_Chr3g0099151 32.653 343 204 9 35 360 87 419 5.03e-41 149
Msa1191270 MtrunA17_Chr2g0284951 33.431 341 195 12 36 363 34 355 1.06e-40 147
Msa1191270 MtrunA17_Chr6g0457921 28.533 368 235 10 8 361 7 360 1.77e-40 146
Msa1191270 MtrunA17_Chr8g0370951 28.460 383 237 13 1 362 1 367 2.15e-40 146
Msa1191270 MtrunA17_Chr4g0017431 27.566 341 225 7 35 362 31 362 3.33e-40 145
Msa1191270 MtrunA17_Chr3g0142921 31.287 342 207 11 13 335 8 340 3.36e-40 145
Msa1191270 MtrunA17_Chr1g0160031 30.556 360 219 10 10 347 18 368 2.16e-39 144
Msa1191270 MtrunA17_Chr1g0159971 30.117 342 200 8 35 347 47 378 4.39e-39 143
Msa1191270 MtrunA17_Chr7g0275291 29.659 381 221 12 1 350 1 365 1.09e-38 142
Msa1191270 MtrunA17_Chr1g0160011 31.045 335 204 9 35 347 40 369 1.23e-38 142
Msa1191270 MtrunA17_Chr3g0085231 29.891 368 221 10 8 360 2 347 2.31e-38 140
Msa1191270 MtrunA17_Chr5g0420811 30.267 337 213 11 31 360 29 350 1.14e-37 138
Msa1191270 MtrunA17_Chr8g0371481 29.231 325 201 10 35 342 41 353 1.36e-37 138
Msa1191270 MtrunA17_Chr8g0380031 29.513 349 213 9 10 347 63 389 1.62e-37 139
Msa1191270 MtrunA17_Chr5g0437421 27.329 322 211 7 35 340 32 346 3.05e-37 137
Msa1191270 MtrunA17_Chr1g0159981 30.564 337 205 9 35 347 46 377 5.01e-37 137
Msa1191270 MtrunA17_Chr3g0085881 32.849 344 189 11 36 362 34 352 5.19e-37 136
Msa1191270 MtrunA17_Chr3g0142941 32.407 324 196 10 26 338 42 353 9.21e-37 136
Msa1191270 MtrunA17_Chr1g0157001 28.739 341 214 11 40 360 41 372 5.63e-36 134
Msa1191270 MtrunA17_Chr7g0254461 29.971 347 210 9 32 350 40 381 6.59e-36 134
Msa1191270 MtrunA17_Chr2g0285001 30.409 342 210 11 36 363 34 361 9.11e-36 134
Msa1191270 MtrunA17_Chr2g0284991 31.871 342 204 12 36 363 34 360 1.84e-35 133
Msa1191270 MtrunA17_Chr8g0381581 29.446 343 204 8 35 347 40 374 2.54e-35 133
Msa1191270 MtrunA17_Chr7g0226931 26.462 359 219 6 30 348 33 386 2.84e-35 133
Msa1191270 MtrunA17_Chr1g0159991 29.282 362 223 10 10 347 15 367 3.11e-35 132
Msa1191270 MtrunA17_Chr8g0371471 29.321 324 201 10 35 342 41 352 4.61e-35 131
Msa1191270 MtrunA17_Chr6g0450701 28.994 338 212 8 32 348 36 366 1.15e-34 131
Msa1191270 MtrunA17_Chr2g0283501 29.211 380 230 14 1 357 1 364 2.16e-34 130
Msa1191270 MtrunA17_Chr7g0266061 32.288 319 181 13 36 340 43 340 2.35e-34 129
Msa1191270 MtrunA17_Chr1g0160101 28.533 375 223 11 5 347 13 374 4.78e-34 129
Msa1191270 MtrunA17_Chr7g0226911 28.242 347 213 8 32 348 32 372 5.94e-34 129
Msa1191270 MtrunA17_Chr2g0283481 31.322 348 211 10 35 360 47 388 3.15e-33 127
Msa1191270 MtrunA17_Chr6g0450711 30.383 339 200 10 35 348 122 449 3.68e-33 128
Msa1191270 MtrunA17_Chr6g0450731 29.558 362 209 14 8 347 11 348 4.12e-33 126
Msa1191270 MtrunA17_Chr3g0104821 31.198 359 199 16 29 354 40 383 5.59e-33 126
Msa1191270 MtrunA17_Chr1g0178931 29.747 316 192 10 36 340 38 334 5.66e-33 125
Msa1191270 MtrunA17_Chr2g0283531 28.496 379 234 15 5 360 2 366 1.84e-32 125
Msa1191270 MtrunA17_Chr2g0283511 31.579 342 204 12 40 360 36 368 2.45e-32 125
Msa1191270 MtrunA17_Chr2g0284921 29.738 343 208 9 36 362 35 360 2.57e-32 124
Msa1191270 MtrunA17_Chr8g0352901 28.571 371 226 12 6 348 1 360 4.77e-32 124
Msa1191270 MtrunA17_Chr2g0317261 30.245 367 215 15 10 354 7 354 6.42e-32 123
Msa1191270 MtrunA17_Chr8g0370961 29.565 230 151 4 135 360 20 242 6.82e-32 120
Msa1191270 MtrunA17_Chr8g0347751 28.863 343 209 9 36 350 37 372 1.83e-31 122
Msa1191270 MtrunA17_Chr2g0317271 30.245 367 215 15 10 354 7 354 2.16e-31 121
Msa1191270 MtrunA17_Chr4g0057991 27.108 332 219 7 36 350 40 365 2.25e-31 122
Msa1191270 MtrunA17_Chr7g0271551 29.940 334 206 12 28 346 30 350 2.32e-31 122
Msa1191270 MtrunA17_Chr2g0284941 30.702 342 187 13 36 363 34 339 5.03e-31 120
Msa1191270 MtrunA17_Chr0c01g0489581 30.245 367 215 15 10 354 7 354 5.38e-31 120
Msa1191270 MtrunA17_Chr7g0226941 28.698 338 211 7 35 347 33 365 9.07e-31 120
Msa1191270 MtrunA17_Chr0c01g0489571 30.245 367 215 15 10 354 7 354 1.70e-30 119
Msa1191270 MtrunA17_Chr7g0273101 28.611 360 217 13 20 350 16 364 9.76e-30 117
Msa1191270 MtrunA17_Chr6g0450721 28.571 357 217 11 8 347 11 346 1.36e-29 117
Msa1191270 MtrunA17_Chr3g0112821 28.382 377 229 14 5 360 2 358 1.47e-29 117
Msa1191270 MtrunA17_Chr1g0191461 27.778 378 236 12 1 352 1 367 1.68e-29 117
Msa1191270 MtrunA17_Chr4g0027571 31.651 218 134 5 135 344 3 213 3.48e-29 112
Msa1191270 MtrunA17_Chr1g0178941 28.923 325 191 12 36 340 41 345 1.46e-27 111
Msa1191270 MtrunA17_Chr3g0096551 28.496 379 224 13 5 348 2 368 2.27e-27 111
Msa1191270 MtrunA17_Chr1g0198351 27.476 313 198 9 34 336 42 335 4.65e-27 109
Msa1191270 MtrunA17_Chr3g0093031 28.721 383 225 17 5 360 2 363 9.06e-27 109
Msa1191270 MtrunA17_Chr2g0301581 28.955 335 194 12 35 347 34 346 7.56e-26 106
Msa1191270 MtrunA17_Chr1g0198391 26.453 344 202 10 34 346 32 355 2.21e-24 102
Msa1191270 MtrunA17_Chr2g0301541 28.358 335 196 12 35 347 34 346 3.23e-24 102
Msa1191270 MtrunA17_Chr1g0198381 27.660 329 208 11 34 351 1 310 5.27e-24 100
Msa1191270 MtrunA17_Chr3g0112691 28.184 369 225 15 5 348 2 355 7.55e-24 101
Msa1191270 MtrunA17_Chr8g0339251 27.778 342 206 11 6 325 1 323 1.80e-23 99.4
Msa1191270 MtrunA17_Chr7g0229581 33.553 152 94 3 201 351 8 153 8.39e-22 90.9
Msa1191270 MtrunA17_Chr6g0459921 26.522 230 151 6 140 360 138 358 6.62e-21 92.8
Msa1191270 MtrunA17_Chr6g0455661 26.087 230 152 5 140 360 249 469 1.86e-20 92.4
Msa1191270 MtrunA17_Chr6g0455661 42.742 124 65 2 1 124 1 118 4.15e-19 88.6
Msa1191270 MtrunA17_Chr4g0018571 32.192 146 94 2 195 340 25 165 2.79e-20 87.0
Msa1191270 MtrunA17_Chr7g0229591 37.838 148 77 5 35 173 30 171 2.68e-18 82.4
Msa1191270 MtrunA17_Chr5g0440501 23.333 240 162 7 124 351 7 236 2.00e-16 78.2
Msa1191270 MtrunA17_Chr2g0301591 27.969 261 167 7 35 285 34 283 3.85e-16 77.8
Msa1191270 MtrunA17_Chr6g0469521 31.618 136 88 2 191 326 22 152 1.20e-15 73.6
Msa1191270 MtrunA17_Chr1g0189921 41.322 121 62 4 35 148 31 149 1.36e-15 73.6
Msa1191270 MtrunA17_Chr3g0104801 39.850 133 56 7 29 146 40 163 3.06e-15 73.2
Msa1191270 MtrunA17_Chr3g0104831 27.306 271 165 12 110 354 38 302 3.97e-15 75.1
Msa1191270 MtrunA17_Chr1g0189911 28.966 145 97 2 217 361 6 144 2.21e-14 70.1
Msa1191270 MtrunA17_Chr1g0198401 25.670 261 168 10 88 336 8 254 5.76e-13 68.6
Msa1191270 MtrunA17_Chr7g0228261 34.091 88 53 1 274 361 8 90 1.17e-12 63.5
Msa1191270 MtrunA17_Chr2g0321991 39.796 98 53 3 30 123 28 123 2.82e-12 63.5
Msa1191270 MtrunA17_Chr2g0301551 24.648 284 174 11 86 347 37 302 2.23e-11 64.3
Msa1191270 MtrunA17_Chr2g0283541 26.368 201 133 7 168 360 99 292 2.86e-11 63.9
Msa1191270 MtrunA17_Chr2g0301571 25.352 284 172 12 86 347 37 302 7.48e-11 62.8
Msa1191270 MtrunA17_Chr1g0178951 42.391 92 42 4 36 121 18 104 9.58e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1191270 AT1G53920.1 49.319 367 170 6 11 362 18 383 4.78e-117 345
Msa1191270 AT5G40990.1 50.273 366 165 8 12 362 9 372 7.99e-114 336
Msa1191270 AT1G53940.2 48.656 372 166 10 11 362 8 374 3.32e-109 324
Msa1191270 AT3G14225.2 46.377 345 171 6 29 362 31 372 1.05e-103 310
Msa1191270 AT3G14225.1 46.418 349 169 7 29 362 31 376 3.89e-103 309
Msa1191270 AT1G53990.1 46.175 366 175 7 11 362 6 363 1.09e-98 297
Msa1191270 AT1G53940.1 48.822 297 128 9 11 288 8 299 5.48e-79 244
Msa1191270 AT1G71120.1 31.657 338 206 8 35 360 31 355 3.53e-57 190
Msa1191270 AT5G45960.1 37.025 316 175 10 35 334 47 354 3.53e-55 185
Msa1191270 AT5G15720.1 33.529 340 204 7 35 360 30 361 3.12e-54 182
Msa1191270 AT5G45950.1 34.810 316 184 10 35 340 40 343 1.71e-52 178
Msa1191270 AT2G04570.1 34.421 337 201 9 20 344 13 341 2.44e-51 174
Msa1191270 AT5G41890.1 32.808 381 214 14 4 360 10 372 4.31e-51 175
Msa1191270 AT5G18430.1 31.522 368 220 9 8 359 7 358 1.43e-50 173
Msa1191270 AT4G26790.1 35.494 324 185 10 35 344 29 342 2.15e-50 172
Msa1191270 AT4G26790.2 35.494 324 185 10 35 344 29 342 2.15e-50 172
Msa1191270 AT1G54030.1 31.420 331 200 9 36 361 53 361 9.95e-50 172
Msa1191270 AT1G06990.1 32.716 324 189 9 35 341 37 348 1.01e-48 168
Msa1191270 AT3G04290.1 32.249 338 207 8 35 359 29 357 2.97e-48 167
Msa1191270 AT5G33370.1 31.111 360 221 10 18 361 12 360 7.74e-48 166
Msa1191270 AT3G16370.1 32.551 341 191 11 35 353 30 353 3.08e-47 164
Msa1191270 AT2G40250.1 32.407 324 197 9 35 343 36 352 1.34e-46 162
Msa1191270 AT1G71691.2 31.250 336 211 6 35 360 55 380 1.10e-45 160
Msa1191270 AT2G23540.1 32.000 350 205 11 35 362 48 386 1.99e-45 160
Msa1191270 AT5G03810.1 30.031 323 205 7 35 344 30 344 2.67e-45 159
Msa1191270 AT3G50400.1 30.769 377 227 12 4 357 3 368 2.95e-45 159
Msa1191270 AT1G75890.2 31.562 320 198 9 35 341 47 358 4.54e-45 159
Msa1191270 AT1G75890.3 31.562 320 198 9 35 341 76 387 9.18e-45 159
Msa1191270 AT4G28780.1 31.105 344 207 9 35 361 31 361 1.41e-44 157
Msa1191270 AT5G03820.1 31.402 328 195 10 35 344 33 348 1.81e-44 157
Msa1191270 AT1G59406.1 33.123 317 191 9 35 340 30 336 1.93e-44 156
Msa1191270 AT1G59030.1 33.123 317 191 9 35 340 30 336 1.93e-44 156
Msa1191270 AT1G58725.1 33.123 317 191 9 35 340 30 336 1.93e-44 156
Msa1191270 AT3G14820.1 33.956 321 194 10 35 346 32 343 3.15e-44 156
Msa1191270 AT2G42990.1 30.745 322 205 8 35 345 28 342 3.96e-44 155
Msa1191270 AT5G08460.1 31.287 342 211 8 35 360 49 382 4.98e-44 156
Msa1191270 AT5G03820.2 31.595 326 193 10 35 342 61 374 5.82e-44 156
Msa1191270 AT4G10950.2 28.571 343 220 10 35 362 71 403 7.47e-44 156
Msa1191270 AT5G22810.1 30.887 327 199 11 35 344 34 350 8.64e-44 155
Msa1191270 AT1G29670.1 29.973 377 218 13 1 355 1 353 1.11e-43 155
Msa1191270 AT4G18970.1 31.563 339 207 10 37 360 30 358 1.48e-43 154
Msa1191270 AT1G20120.1 33.229 319 195 9 35 342 78 389 3.84e-43 154
Msa1191270 AT4G18970.2 31.563 339 207 10 37 360 30 358 4.69e-43 154
Msa1191270 AT1G75880.1 31.143 350 214 10 11 340 20 362 4.84e-43 154
Msa1191270 AT1G29670.2 29.973 377 218 13 1 355 69 421 4.99e-43 155
Msa1191270 AT1G58520.3 33.333 318 182 10 35 340 30 329 5.10e-43 152
Msa1191270 AT1G58525.1 33.333 318 182 10 35 340 30 329 5.10e-43 152
Msa1191270 AT1G75890.1 30.330 333 198 9 35 341 47 371 5.10e-43 154
Msa1191270 AT1G20130.2 31.722 331 195 11 35 344 184 504 7.00e-43 156
Msa1191270 AT1G20130.1 31.420 331 196 10 35 344 204 524 7.36e-43 156
Msa1191270 AT1G75880.2 30.946 349 215 10 11 340 20 361 1.90e-42 152
Msa1191270 AT5G42170.1 31.579 323 202 10 26 340 45 356 1.93e-42 152
Msa1191270 AT1G20132.1 30.154 325 203 9 35 345 61 375 2.71e-42 152
Msa1191270 AT2G19010.1 29.630 378 221 13 1 363 1 348 3.89e-42 150
Msa1191270 AT2G19010.2 29.630 378 221 13 1 363 31 378 9.67e-42 150
Msa1191270 AT5G37690.1 29.448 326 198 10 37 345 29 339 1.39e-41 149
Msa1191270 AT5G45670.1 30.473 338 212 9 37 360 31 359 2.10e-41 149
Msa1191270 AT4G10950.1 28.280 343 217 11 35 362 71 399 2.67e-41 149
Msa1191270 AT1G58430.1 31.661 319 188 10 35 335 35 341 3.58e-41 148
Msa1191270 AT1G74460.1 29.321 324 207 7 34 344 22 336 8.88e-41 147
Msa1191270 AT5G15720.2 34.586 266 157 6 35 286 30 292 1.05e-40 145
Msa1191270 AT1G75900.1 29.683 347 221 10 12 344 18 355 1.39e-40 147
Msa1191270 AT3G53100.1 30.312 320 201 9 35 341 29 339 2.78e-40 145
Msa1191270 AT1G29660.1 30.149 335 195 10 37 350 34 350 3.47e-40 145
Msa1191270 AT2G24560.1 31.348 319 189 10 35 335 34 340 4.28e-40 145
Msa1191270 AT3G14210.1 29.942 344 204 12 33 360 34 356 5.18e-40 146
Msa1191270 AT5G63170.1 32.268 313 178 11 35 334 28 319 6.86e-40 144
Msa1191270 AT2G27360.1 31.152 382 234 13 1 360 1 375 1.22e-39 145
Msa1191270 AT3G14220.1 31.405 363 217 16 11 360 7 350 1.36e-39 144
Msa1191270 AT1G28650.1 29.600 375 221 12 1 347 7 366 1.63e-39 144
Msa1191270 AT1G28600.1 32.059 340 203 12 35 355 31 361 2.42e-39 144
Msa1191270 AT1G54010.1 30.728 371 216 15 9 360 6 354 3.44e-39 144
Msa1191270 AT2G30220.1 28.775 351 220 9 15 344 7 348 4.68e-39 142
Msa1191270 AT1G54000.1 29.570 372 223 14 7 360 4 354 8.30e-39 142
Msa1191270 AT1G28580.1 29.620 368 224 11 10 351 12 370 1.12e-38 142
Msa1191270 AT5G55050.1 30.321 343 212 11 36 360 40 373 2.78e-38 141
Msa1191270 AT2G30310.1 29.193 322 210 7 35 344 34 349 5.70e-38 139
Msa1191270 AT1G20135.1 29.154 319 192 9 35 340 29 326 9.60e-38 138
Msa1191270 AT4G01130.1 30.058 346 203 9 35 350 34 370 1.15e-37 139
Msa1191270 AT1G28590.1 29.144 374 239 12 11 363 12 380 1.59e-37 139
Msa1191270 AT2G19060.1 30.473 338 199 11 37 360 32 347 2.05e-37 138
Msa1191270 AT1G28640.1 29.600 375 225 12 1 347 1 364 5.05e-37 138
Msa1191270 AT1G28570.1 29.661 354 215 12 35 363 34 378 5.66e-37 137
Msa1191270 AT5G37690.2 28.308 325 195 10 37 345 29 331 6.40e-37 136
Msa1191270 AT5G15720.3 29.514 288 184 5 87 360 48 330 1.04e-36 135
Msa1191270 AT2G19050.1 30.973 339 194 13 37 360 33 346 1.32e-36 135
Msa1191270 AT5G03610.1 31.476 359 203 14 5 340 6 344 3.09e-36 135
Msa1191270 AT1G75920.2 31.232 349 202 12 11 344 9 334 4.01e-36 134
Msa1191270 AT1G71250.1 27.515 338 225 6 35 360 41 370 6.36e-36 134
Msa1191270 AT2G31540.1 29.814 322 208 7 35 344 35 350 9.42e-36 134
Msa1191270 AT3G43550.1 33.577 274 157 10 26 286 25 286 2.13e-35 131
Msa1191270 AT1G31550.2 30.595 353 206 12 35 360 36 376 4.20e-35 132
Msa1191270 AT3G43570.1 30.915 317 169 11 35 340 30 307 5.16e-35 130
Msa1191270 AT1G33811.1 29.912 341 215 10 36 360 35 367 6.61e-35 132
Msa1191270 AT1G54020.2 27.855 359 229 13 10 361 12 347 8.33e-35 131
Msa1191270 AT1G23500.1 31.498 327 188 11 35 347 35 339 1.72e-34 130
Msa1191270 AT1G28660.1 28.610 367 239 10 1 347 1 364 2.45e-34 130
Msa1191270 AT1G54030.2 33.471 242 141 7 36 272 53 279 2.87e-34 129
Msa1191270 AT5G14450.1 28.863 343 204 8 35 347 41 373 5.55e-34 129
Msa1191270 AT1G67830.1 30.330 333 200 10 35 340 30 357 2.01e-33 127
Msa1191270 AT1G28660.2 28.883 367 237 11 1 347 1 363 2.39e-33 127
Msa1191270 AT4G30140.1 28.529 333 208 10 37 360 35 346 2.66e-33 127
Msa1191270 AT3G48460.1 28.863 343 219 11 23 347 28 363 2.69e-33 127
Msa1191270 AT1G73610.1 30.312 320 188 10 35 341 35 332 3.92e-33 126
Msa1191270 AT1G54790.3 28.723 376 224 15 6 350 5 367 4.27e-33 127
Msa1191270 AT1G28670.1 28.261 368 240 9 1 347 1 365 7.91e-33 126
Msa1191270 AT3G26430.1 28.571 343 207 7 35 347 31 365 1.16e-32 125
Msa1191270 AT2G03980.2 30.183 328 194 11 35 346 43 351 2.08e-32 125
Msa1191270 AT2G03980.3 30.183 328 194 11 35 346 43 351 2.08e-32 125
Msa1191270 AT2G03980.1 30.183 328 194 11 35 346 43 351 2.08e-32 125
Msa1191270 AT2G03980.4 30.183 328 194 11 35 346 43 351 2.08e-32 125
Msa1191270 AT1G75910.1 29.938 324 196 10 35 344 28 334 2.13e-32 124
Msa1191270 AT1G31550.1 30.114 352 206 13 35 360 36 373 2.43e-32 125
Msa1191270 AT1G75920.1 29.945 364 202 13 11 344 4 344 2.78e-32 124
Msa1191270 AT1G71691.3 31.679 262 164 5 35 286 55 311 1.27e-30 119
Msa1191270 AT5G45910.1 30.387 362 225 9 11 347 5 364 1.68e-30 120
Msa1191270 AT3G05180.1 28.022 364 222 12 20 353 21 374 1.97e-30 120
Msa1191270 AT1G09390.1 28.664 307 189 10 64 350 62 358 2.51e-30 119
Msa1191270 AT1G71691.1 26.667 285 191 5 86 360 3 279 3.54e-30 117
Msa1191270 AT1G28610.2 28.011 357 205 12 35 360 31 366 4.52e-30 119
Msa1191270 AT2G19050.2 33.065 248 143 8 37 272 33 269 1.39e-29 115
Msa1191270 AT1G56670.1 26.741 359 226 11 10 346 14 357 2.94e-29 116
Msa1191270 AT5G33370.2 29.682 283 181 8 18 286 12 290 3.91e-29 115
Msa1191270 AT1G75930.1 31.077 325 186 13 35 342 29 332 4.31e-29 115
Msa1191270 AT1G75920.4 29.836 305 182 10 55 344 19 306 3.09e-28 112
Msa1191270 AT1G75920.3 28.198 344 188 11 11 344 9 303 8.22e-28 111
Msa1191270 AT5G03600.1 30.218 321 192 10 30 340 9 307 2.15e-27 110
Msa1191270 AT5G03600.2 30.218 321 192 10 30 340 44 342 2.81e-27 110
Msa1191270 AT4G01130.2 29.927 274 161 6 35 286 34 298 2.87e-27 110
Msa1191270 AT3G62280.1 30.000 290 185 7 64 340 61 345 3.79e-27 110
Msa1191270 AT3G09930.2 29.595 321 191 10 36 340 40 341 3.93e-27 110
Msa1191270 AT3G09930.1 29.595 321 191 10 36 340 40 341 3.93e-27 110
Msa1191270 AT2G24560.2 29.304 273 168 9 35 289 34 299 7.48e-27 108
Msa1191270 AT1G54790.1 27.202 386 225 15 1 350 1 366 8.00e-26 107
Msa1191270 AT3G27950.1 26.913 379 235 13 1 354 1 362 6.26e-25 104
Msa1191270 AT1G53970.2 63.514 74 27 0 29 102 14 87 3.88e-24 95.5
Msa1191270 AT1G53970.1 63.514 74 27 0 29 102 14 87 3.88e-24 95.5
Msa1191270 AT4G16230.1 32.174 230 132 10 11 221 3 227 8.81e-24 99.0
Msa1191270 AT4G01130.3 27.113 284 181 7 93 350 1 284 3.09e-23 98.6
Msa1191270 AT2G04020.2 34.685 222 122 9 35 241 43 256 5.20e-22 95.5
Msa1191270 AT2G31550.1 26.733 202 136 2 146 340 9 205 6.57e-22 93.2
Msa1191270 AT2G04020.1 35.294 204 112 7 35 225 43 239 8.81e-22 94.0
Msa1191270 AT1G28580.2 27.835 291 176 10 86 351 8 289 1.82e-21 94.0
Msa1191270 AT2G36325.1 29.787 329 195 13 36 349 48 355 2.16e-21 94.4
Msa1191270 AT1G54790.2 25.971 412 223 17 1 350 1 392 4.72e-21 94.0
Msa1191270 AT1G56670.2 26.441 295 188 9 10 286 14 297 7.14e-21 92.0
Msa1191270 AT3G62280.2 31.356 236 144 7 64 286 61 291 2.83e-20 90.1
Msa1191270 AT1G28600.2 34.483 174 104 6 35 198 31 204 2.58e-19 85.9
Msa1191270 AT1G54020.4 25.359 209 144 5 159 361 10 212 2.83e-18 83.6
Msa1191270 AT1G54020.1 25.359 209 144 5 159 361 59 261 9.63e-18 82.8
Msa1191270 AT1G54020.5 25.359 209 144 5 159 361 59 261 9.63e-18 82.8
Msa1191270 AT1G54020.3 25.359 209 144 5 159 361 59 261 9.63e-18 82.8
Msa1191270 AT3G14210.2 25.417 240 154 7 132 360 3 228 3.59e-17 80.9
Msa1191270 AT1G28570.3 27.962 211 130 7 168 363 12 215 1.09e-16 79.0
Msa1191270 AT4G16233.1 31.250 128 82 2 234 360 5 127 1.46e-16 75.9
Msa1191270 AT1G28570.2 27.962 211 130 7 168 363 103 306 2.31e-16 79.3
Msa1191270 AT1G28610.1 43.011 93 42 2 35 121 31 118 2.70e-13 69.3
Msa1191270 AT5G03980.1 24.603 252 165 9 111 344 66 310 8.13e-11 63.2

Find 79 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGATTGGAGGGAGGAAATT+TGG 0.102610 8_1:-35400896 Msa1191270:CDS
CATTGGAAGCAATGATTATT+TGG 0.181621 8_1:-35402985 Msa1191270:CDS
CTATATTCTTGTGAGTATTA+TGG 0.183428 8_1:-35399539 Msa1191270:three_prime_UTR
ATAAGCAACCCTTCAAAATT+TGG 0.184391 8_1:-35400668 Msa1191270:intron
CATGTTGCATTATTTGTATT+TGG 0.230130 8_1:-35404223 Msa1191270:CDS
AATAGGTATGGTTGAATTAA+TGG 0.244302 8_1:+35403887 None:intergenic
GGATTGGAGGGAGGAAATTT+GGG 0.282446 8_1:-35400895 Msa1191270:CDS
TATATTCTTGTGAGTATTAT+GGG 0.290672 8_1:-35399538 Msa1191270:three_prime_UTR
TCCATTTACAAATGCCTTGA+TGG 0.290946 8_1:+35400838 None:intergenic
GTTGTGGTAGTGGCCCTTAC+AGG 0.293748 8_1:-35399838 Msa1191270:CDS
CATAACATAAGAAGAAAATT+AGG 0.312237 8_1:+35404290 None:intergenic
TTTGTAAATGGAACTAAATC+AGG 0.323477 8_1:-35400827 Msa1191270:CDS
AATAATGCAACATGTTCTTT+TGG 0.326084 8_1:+35404232 None:intergenic
GCCATCAAGGCATTTGTAAA+TGG 0.328585 8_1:-35400839 Msa1191270:CDS
TTCTGAGAAATTAACTTAGA+TGG 0.332811 8_1:-35404338 Msa1191270:exon
GGTTATCTACCATATATTAA+TGG 0.332965 8_1:-35403860 Msa1191270:CDS
ATTTCCACTCCACATGTATT+GGG 0.341425 8_1:+35399697 None:intergenic
GATTTCCACTCCACATGTAT+TGG 0.349018 8_1:+35399696 None:intergenic
ATTCAACCATACCTATTTCC+TGG 0.370919 8_1:-35403881 Msa1191270:CDS
AAATTGACTCCATTAATATA+TGG 0.389354 8_1:+35403851 None:intergenic
GTTGATTAAGTAAACAGCTT+TGG 0.391709 8_1:+35403007 None:intergenic
AATTCTCACTTATTTATTTG+AGG 0.398197 8_1:-35399479 None:intergenic
TTGAAGAAGGTTTCACCATA+TGG 0.403375 8_1:+35404130 None:intergenic
CTGGCTAATTACCCACCATA+TGG 0.406020 8_1:-35404145 Msa1191270:CDS
ATGGTAGATAACCAGGAAAT+AGG 0.408868 8_1:+35403870 None:intergenic
ATATTCTTACCTATGAAATC+TGG 0.418997 8_1:+35404070 None:intergenic
TTTACAAATGCCTTGATGGC+TGG 0.420079 8_1:+35400842 None:intergenic
ATTTAACTTCAGGGAATACA+TGG 0.424856 8_1:-35400917 Msa1191270:intron
TGAAAAGGTTTGAAAGAAGC+AGG 0.440425 8_1:-35399869 Msa1191270:intron
ATTCTCACTTATTTATTTGA+GGG 0.441583 8_1:-35399478 None:intergenic
CGTGTCATTCCAGATTTCAT+AGG 0.463040 8_1:-35404079 Msa1191270:intron
TTGTGGTAGTGGCCCTTACA+GGG 0.464609 8_1:-35399837 Msa1191270:CDS
CAACTGTAATATCCCCTGTA+AGG 0.464881 8_1:+35399824 None:intergenic
ATTCTTAACCAACCATCTCT+TGG 0.467093 8_1:-35400872 Msa1191270:CDS
ACCTTCTTCAAGTATCCATC+TGG 0.479315 8_1:-35404118 Msa1191270:CDS
CTTCAGGGAATACATGGGAT+TGG 0.480422 8_1:-35400911 Msa1191270:intron
CGAAGAAACCACAACTCTAC+TGG 0.481563 8_1:-35403030 Msa1191270:CDS
CAGGGAATACATGGGATTGG+AGG 0.484691 8_1:-35400908 Msa1191270:CDS
GGAGTGGCATGTTGTGGTAG+TGG 0.491898 8_1:-35399848 Msa1191270:CDS
ATCCTACTGAAGCTGGTAGT+AGG 0.494169 8_1:-35399727 Msa1191270:CDS
GCTGTTTACTTAATCAACAT+TGG 0.499662 8_1:-35403002 Msa1191270:CDS
TGGCTGTTCTCCAGCCATCA+AGG 0.515957 8_1:-35400852 Msa1191270:CDS
TTCTCACTTATTTATTTGAG+GGG 0.523188 8_1:-35399477 None:intergenic
TACAGGGGATATTACAGTTG+TGG 0.536295 8_1:-35399821 Msa1191270:CDS
AGCTTTGGCCAGTAGAGTTG+TGG 0.543618 8_1:+35403022 None:intergenic
TCTTCTCATCCTACTGAAGC+TGG 0.544803 8_1:-35399734 Msa1191270:CDS
ACCAGATGGATACTTGAAGA+AGG 0.545031 8_1:+35404117 None:intergenic
AAAGTATTGAGGCAGAGACT+AGG 0.559623 8_1:-35403056 Msa1191270:CDS
GGAATGCTAATTCCAACACT+TGG 0.569917 8_1:-35404268 Msa1191270:CDS
TTAATATATGGTAGATAACC+AGG 0.571655 8_1:+35403863 None:intergenic
AGATAACCAGGAAATAGGTA+TGG 0.573739 8_1:+35403875 None:intergenic
AAGAAGGTTTCACCATATGG+TGG 0.576872 8_1:+35404133 None:intergenic
AGTAGAAACTCATCAAGGAC+TGG 0.581951 8_1:-35403804 Msa1191270:intron
TCAAAGAACAAATATTCAGA+AGG 0.585525 8_1:+35399758 None:intergenic
TGGGATATTACGATATGTAG+AGG 0.592705 8_1:-35399519 Msa1191270:three_prime_UTR
AACTGTAATATCCCCTGTAA+GGG 0.595147 8_1:+35399825 None:intergenic
GCTGGAGAACAGCCAAGAGA+TGG 0.595500 8_1:+35400860 None:intergenic
TAGTTTAGTGTTGTGCACTT+TGG 0.595776 8_1:+35400775 None:intergenic
GCACAACACTAAACTATCAG+TGG 0.598618 8_1:-35400768 Msa1191270:CDS
CCATCAGAAAATCTACCAGA+TGG 0.603978 8_1:+35404103 None:intergenic
GAAGCAGGAGTGGCATGTTG+TGG 0.604372 8_1:-35399854 Msa1191270:CDS
AAATATGTATCAATGGTTGT+TGG 0.604489 8_1:-35402933 Msa1191270:CDS
AGTGGAAATCAAAGTATCAC+CGG 0.606433 8_1:-35399683 Msa1191270:CDS
AGAAGGTTTCACCATATGGT+GGG 0.608192 8_1:+35404134 None:intergenic
AGGGAATACATGGGATTGGA+GGG 0.616953 8_1:-35400907 Msa1191270:CDS
AGACATATGTTGCCAAGTGT+TGG 0.623896 8_1:+35404256 None:intergenic
GAGAACAGCCAAGAGATGGT+TGG 0.624886 8_1:+35400864 None:intergenic
AGGGGATATTACAGTTGTGG+AGG 0.626389 8_1:-35399818 Msa1191270:CDS
GAATACATGGGATTGGAGGG+AGG 0.626709 8_1:-35400904 Msa1191270:CDS
GGATTATATCCCAATACATG+TGG 0.630333 8_1:-35399706 Msa1191270:CDS
TTTAACTTCAGGGAATACAT+GGG 0.632492 8_1:-35400916 Msa1191270:intron
AGAATGTCAAGAAAGTATTG+AGG 0.633947 8_1:-35403067 Msa1191270:CDS
AATTTAACGAAACAGATCAA+AGG 0.635768 8_1:-35400737 Msa1191270:CDS
AGGTTTGAAAGAAGCAGGAG+TGG 0.636959 8_1:-35399864 Msa1191270:CDS
ATCCTACTACCAGCTTCAGT+AGG 0.641830 8_1:+35399725 None:intergenic
ATATCCCAATACATGTGGAG+TGG 0.645943 8_1:-35399701 Msa1191270:CDS
GCTTTAGTAGAAACTCATCA+AGG 0.663302 8_1:-35403809 Msa1191270:CDS
TTTACATACTTTGATCACAG+TGG 0.680071 8_1:+35402902 None:intergenic
TGTGGTAGTGGCCCTTACAG+GGG 0.690825 8_1:-35399836 Msa1191270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAGATTATGTTTTTTTTTTT+AGG - chr8_1:35400294-35400313 Msa1191270:intron 10.0%
!!! AGATTATGTTTTTTTTTTTA+GGG - chr8_1:35400295-35400314 Msa1191270:intron 10.0%
!!! AAACAAATTTTTTTACATAA+GGG + chr8_1:35400364-35400383 None:intergenic 10.0%
!!! TAAACAAATTTTTTTACATA+AGG + chr8_1:35400365-35400384 None:intergenic 10.0%
!!! AAAAAAGAGATATTTTTTTA+GGG + chr8_1:35401064-35401083 None:intergenic 10.0%
!! TCTGAAAAAAATTAAAATTA+TGG - chr8_1:35401385-35401404 Msa1191270:intron 10.0%
!! TTAATGAAAAATAAAAATTC+TGG - chr8_1:35401481-35401500 Msa1191270:intron 10.0%
!! TGAAAATAATTGAAAAAATA+CGG + chr8_1:35402051-35402070 None:intergenic 10.0%
!!! GAATTTTTTTTAAAAAATTC+TGG + chr8_1:35402188-35402207 None:intergenic 10.0%
!!! TAAAAAAAATATCTCTTTTT+TGG + chr8_1:35402375-35402394 None:intergenic 10.0%
!!! AAAAAAGAGATATTTTTTTT+AGG - chr8_1:35402374-35402393 Msa1191270:intron 10.0%
!!! AAAAAGAGATATTTTTTTTA+GGG - chr8_1:35402375-35402394 Msa1191270:intron 10.0%
!! ACTTATTTAAAAAGTAATTA+GGG - chr8_1:35402655-35402674 Msa1191270:intron 10.0%
!!! ATTTATAAAAATAAGTTGAA+AGG + chr8_1:35402734-35402753 None:intergenic 10.0%
!! TTTATAGCATTATTTATTTA+TGG - chr8_1:35403208-35403227 Msa1191270:intron 10.0%
!!! AAAAAGAGATATTTTTTTAG+GGG + chr8_1:35401063-35401082 None:intergenic 15.0%
!!! CAAAAAAGAGATATTTTTTT+AGG + chr8_1:35402373-35402392 None:intergenic 15.0%
!!! CTAAAAAAATATCTCTTTTT+TGG - chr8_1:35401063-35401082 Msa1191270:intron 15.0%
!!! CGAAATTTTAATTAAAATTC+TGG - chr8_1:35401422-35401441 Msa1191270:intron 15.0%
!!! ATTTTCATTAGTATTTTTTC+CGG - chr8_1:35401670-35401689 Msa1191270:intron 15.0%
!!! ATTTTCATTAGTATTTTTTC+CGG - chr8_1:35401670-35401689 Msa1191270:intron 15.0%
!!! ACAAATAATTTTTTGTAAAC+CGG + chr8_1:35401744-35401763 None:intergenic 15.0%
!! ACAAAAAATTATTTGTATTC+TGG - chr8_1:35401748-35401767 Msa1191270:intron 15.0%
!!! ATTTTTGTGTATTTATAAAC+CGG + chr8_1:35401804-35401823 None:intergenic 15.0%
!!! AATTTCATTAGTATTTTTTC+CGG + chr8_1:35401829-35401848 None:intergenic 15.0%
!! ATTGAAAAAATTGAAAATTC+TGG + chr8_1:35401882-35401901 None:intergenic 15.0%
!! TTAAAAATTTCGAAAATATC+TGG + chr8_1:35401948-35401967 None:intergenic 15.0%
!!! AAAAGAGATATTTTTTTTAG+GGG - chr8_1:35402376-35402395 Msa1191270:intron 15.0%
!!! TCAAAACATGTTTTAATTAT+GGG + chr8_1:35402632-35402651 None:intergenic 15.0%
!!! ATCAAAACATGTTTTAATTA+TGG + chr8_1:35402633-35402652 None:intergenic 15.0%
!! GACTTATTTAAAAAGTAATT+AGG - chr8_1:35402654-35402673 Msa1191270:intron 15.0%
!!! TTGAATTTAATTTGTATATC+CGG - chr8_1:35403261-35403280 Msa1191270:intron 15.0%
!!! TTTAAAGTCATTCATTTAAT+TGG + chr8_1:35403324-35403343 None:intergenic 15.0%
!!! AATTTGCTTATAATTCATAA+CGG + chr8_1:35403505-35403524 None:intergenic 15.0%
!!! ATAAGCAAATTTAACTTTTT+AGG + chr8_1:35403496-35403515 None:intergenic 15.0%
!!! GATATTAGTTTTCAATTTAA+TGG - chr8_1:35403812-35403831 Msa1191270:CDS 15.0%
!! CATAACATAAGAAGAAAATT+AGG + chr8_1:35399548-35399567 None:intergenic 20.0%
!!! CTAATTTTCTTCTTATGTTA+TGG - chr8_1:35399546-35399565 Msa1191270:three_prime_UTR 20.0%
!! TGCATATAAGCTATTTATTA+TGG + chr8_1:35399856-35399875 None:intergenic 20.0%
!!! AAATTGACTCCATTAATATA+TGG + chr8_1:35399987-35400006 None:intergenic 20.0%
!!! TGATTTTTTTAGCTTAATTG+CGG - chr8_1:35400100-35400119 Msa1191270:intron 20.0%
!!! TTTTTTGGTTTTAGAAATCT+TGG + chr8_1:35400170-35400189 None:intergenic 20.0%
!!! AATGTTACATCATCATTTTT+TGG + chr8_1:35400185-35400204 None:intergenic 20.0%
!! TTTACATGTCAATAGAAAAT+TGG - chr8_1:35400209-35400228 Msa1191270:intron 20.0%
!!! ATTTTTGGATCTAAAAATGA+CGG + chr8_1:35400239-35400258 None:intergenic 20.0%
!!! ATTTGAAAATTCTTTGGTTT+TGG + chr8_1:35400541-35400560 None:intergenic 20.0%
!! TCTGTAATTTGAAAATTCTT+TGG + chr8_1:35400547-35400566 None:intergenic 20.0%
!! TCATGAAAAATATGTATCAA+TGG - chr8_1:35400895-35400914 Msa1191270:CDS 20.0%
!!! TAATAATATCGTAGTTCTTT+TGG - chr8_1:35400976-35400995 Msa1191270:intron 20.0%
!!! AGTTCTTTTGGTTATAATTA+AGG - chr8_1:35400988-35401007 Msa1191270:intron 20.0%
!!! AAAAGAGATATTTTTTTAGG+GGG + chr8_1:35401062-35401081 None:intergenic 20.0%
!! ATAAAATAAATTTACACACG+TGG + chr8_1:35401163-35401182 None:intergenic 20.0%
!! TTCTGGATTAATTAAAATTC+TGG - chr8_1:35401439-35401458 Msa1191270:intron 20.0%
!!! TTTTCATTAGTATTTTTTCC+GGG - chr8_1:35401671-35401690 Msa1191270:intron 20.0%
!!! AATACTAATGAAAATTTTCC+CGG + chr8_1:35401692-35401711 None:intergenic 20.0%
!!! TTTTCATTAGTATTTTTTCC+GGG - chr8_1:35401671-35401690 Msa1191270:intron 20.0%
!!! AATTTTCATTATGTGTATTC+CGG - chr8_1:35401722-35401741 Msa1191270:intron 20.0%
!! ACAAAAAATTATGTGTATTC+CGG - chr8_1:35401782-35401801 Msa1191270:intron 20.0%
!! TATAAATACACAAAAATTCC+CGG - chr8_1:35401807-35401826 Msa1191270:intron 20.0%
!!! ATTTCATTAGTATTTTTTCC+GGG + chr8_1:35401828-35401847 None:intergenic 20.0%
!!! ATTGAAAATTCTGGAAAATA+CGG + chr8_1:35401873-35401892 None:intergenic 20.0%
!!! TTCTTAAAAAAACGGAATTT+TGG + chr8_1:35401908-35401927 None:intergenic 20.0%
!! AAACGGAATTCTTAAAAAAA+CGG + chr8_1:35401916-35401935 None:intergenic 20.0%
!! ATATCTGGAAAATTTGAAAA+CGG + chr8_1:35401933-35401952 None:intergenic 20.0%
!! CGGAAAAAATTAAAAAATTC+AGG + chr8_1:35402031-35402050 None:intergenic 20.0%
!!! AAAGAGATATTTTTTTTAGG+GGG - chr8_1:35402377-35402396 Msa1191270:intron 20.0%
!! GTAATTAAGCCTATAATTAA+AGG - chr8_1:35402439-35402458 Msa1191270:intron 20.0%
!! TAACATTCTCCTTTAATTAT+AGG + chr8_1:35402451-35402470 None:intergenic 20.0%
!!! AGTAAAAACTTACATTTTCA+AGG - chr8_1:35402559-35402578 Msa1191270:intron 20.0%
!!! TATAAAAATAAGTTGAAAGG+AGG + chr8_1:35402731-35402750 None:intergenic 20.0%
!! TTAAGATGTTTATTCAAACA+TGG - chr8_1:35402846-35402865 Msa1191270:intron 20.0%
!! ATTAGAATAGTAGAAGATTT+AGG + chr8_1:35402872-35402891 None:intergenic 20.0%
!!! TAAGCAAATTTGAACTTTTT+AGG - chr8_1:35403407-35403426 Msa1191270:intron 20.0%
!! GATGTATGTGATTTATATTA+TGG + chr8_1:35403459-35403478 None:intergenic 20.0%
!! AATTTCATAGTACAAATATG+CGG + chr8_1:35403719-35403738 None:intergenic 20.0%
!! AAATTGAGTTAACATCAAAT+AGG - chr8_1:35403734-35403753 Msa1191270:intron 20.0%
!! TATATTCTTGTGAGTATTAT+GGG - chr8_1:35404297-35404316 Msa1191270:CDS 20.0%
!! TTCTGAGAAATTAACTTAGA+TGG - chr8_1:35399497-35399516 Msa1191270:three_prime_UTR 25.0%
!! AATAATGCAACATGTTCTTT+TGG + chr8_1:35399606-35399625 None:intergenic 25.0%
! CATGTTGCATTATTTGTATT+TGG - chr8_1:35399612-35399631 Msa1191270:three_prime_UTR 25.0%
! ATATTCTTACCTATGAAATC+TGG + chr8_1:35399768-35399787 None:intergenic 25.0%
! AATAGGTATGGTTGAATTAA+TGG + chr8_1:35399951-35399970 None:intergenic 25.0%
! TTAATATATGGTAGATAACC+AGG + chr8_1:35399975-35399994 None:intergenic 25.0%
! GGTTATCTACCATATATTAA+TGG - chr8_1:35399975-35399994 Msa1191270:intron 25.0%
! TGTCAAATAACTAAACAACT+CGG + chr8_1:35400262-35400281 None:intergenic 25.0%
! TAAAGAATCTTCGAATTACA+TGG + chr8_1:35400396-35400415 None:intergenic 25.0%
!!! TCTTTAGTTTTAGACCTTTA+AGG - chr8_1:35400410-35400429 Msa1191270:intron 25.0%
! TTTGTAATTTGATGCCTTAA+AGG + chr8_1:35400427-35400446 None:intergenic 25.0%
! GCATCAAATTACAAAATCTA+AGG - chr8_1:35400432-35400451 Msa1191270:intron 25.0%
!! GAATTTTCAAATTACAGAGT+TGG - chr8_1:35400549-35400568 Msa1191270:intron 25.0%
!! TATAAGAGAGTTTGATGATA+CGG - chr8_1:35400694-35400713 Msa1191270:CDS 25.0%
! AAATATGTATCAATGGTTGT+TGG - chr8_1:35400902-35400921 Msa1191270:CDS 25.0%
!! TTAAGGCTTAATTACACTTT+TGG - chr8_1:35401005-35401024 Msa1191270:intron 25.0%
! TTAGTATATATGTCGAACTT+AGG - chr8_1:35401617-35401636 Msa1191270:intron 25.0%
! TACACATAATGAAAATTTCC+CGG + chr8_1:35401719-35401738 None:intergenic 25.0%
!! TATAGGCTTAATTACACTTT+TGG + chr8_1:35402434-35402453 None:intergenic 25.0%
!! TCATTCCAATATTTAACTTC+AGG - chr8_1:35402908-35402927 Msa1191270:intron 25.0%
!! CATTCCAATATTTAACTTCA+GGG - chr8_1:35402909-35402928 Msa1191270:intron 25.0%
! TATTCCCTGAAGTTAAATAT+TGG + chr8_1:35402916-35402935 None:intergenic 25.0%
! TTTGTAAATGGAACTAAATC+AGG - chr8_1:35403008-35403027 Msa1191270:CDS 25.0%
! AATTTAACGAAACAGATCAA+AGG - chr8_1:35403098-35403117 Msa1191270:CDS 25.0%
!! ATAACCTACCAAATTTTGAA+GGG + chr8_1:35403178-35403197 None:intergenic 25.0%
!! AATAACCTACCAAATTTTGA+AGG + chr8_1:35403179-35403198 None:intergenic 25.0%
!!! ATTTAATTTGTATATCCGGT+CGG - chr8_1:35403265-35403284 Msa1191270:intron 25.0%
! CAAACATTTGAAAGATTTGA+CGG - chr8_1:35403362-35403381 Msa1191270:intron 25.0%
! TTGCTTATAATTCATAACAG+AGG - chr8_1:35403508-35403527 Msa1191270:intron 25.0%
! TGCTTATAATTCATAACAGA+GGG - chr8_1:35403509-35403528 Msa1191270:intron 25.0%
!!! TTTTTGGTCAAGGAAAAATA+GGG + chr8_1:35403618-35403637 None:intergenic 25.0%
!!! TTTTTTGGTCAAGGAAAAAT+AGG + chr8_1:35403619-35403638 None:intergenic 25.0%
!!! AAATGGGGACTTTTTTTTTT+TGG + chr8_1:35403634-35403653 None:intergenic 25.0%
! TTGAGACATTAAATCTGTTA+TGG + chr8_1:35403666-35403685 None:intergenic 25.0%
! ATTTCATAGTACAAATATGC+GGG + chr8_1:35403718-35403737 None:intergenic 25.0%
!!! GACTTAATTTGATGATGAAA+AGG - chr8_1:35403951-35403970 Msa1191270:intron 25.0%
! TCAAAGAACAAATATTCAGA+AGG + chr8_1:35404080-35404099 None:intergenic 25.0%
!!! ATAGAGTTTTGAGATTGTAA+GGG + chr8_1:35404178-35404197 None:intergenic 25.0%
!!! AATAGAGTTTTGAGATTGTA+AGG + chr8_1:35404179-35404198 None:intergenic 25.0%
! CTATATTCTTGTGAGTATTA+TGG - chr8_1:35404296-35404315 Msa1191270:CDS 25.0%
!!! GGAGATTCATTTTTTGATGT+TGG - chr8_1:35399633-35399652 Msa1191270:exon 30.0%
!!! CAATACTACTACTGATTTTC+TGG - chr8_1:35399671-35399690 Msa1191270:CDS 30.0%
! AACTAAACAACTCGGATTTT+TGG + chr8_1:35400254-35400273 None:intergenic 30.0%
GAAAATCGCTAATATTAAGG+GGG + chr8_1:35400335-35400354 None:intergenic 30.0%
CGAAAATCGCTAATATTAAG+GGG + chr8_1:35400336-35400355 None:intergenic 30.0%
CCGAAAATCGCTAATATTAA+GGG + chr8_1:35400337-35400356 None:intergenic 30.0%
! CCCTTAATATTAGCGATTTT+CGG - chr8_1:35400334-35400353 Msa1191270:intron 30.0%
ACCGAAAATCGCTAATATTA+AGG + chr8_1:35400338-35400357 None:intergenic 30.0%
GAAATTCTCTCAAATTACAG+AGG + chr8_1:35400466-35400485 None:intergenic 30.0%
ACAAAATCGATGATATGACA+GGG + chr8_1:35400497-35400516 None:intergenic 30.0%
TACAAAATCGATGATATGAC+AGG + chr8_1:35400498-35400517 None:intergenic 30.0%
TGTACAGTCAAAATTCATGA+AGG - chr8_1:35400514-35400533 Msa1191270:intron 30.0%
TACGGTGTTTATATATTTCC+AGG - chr8_1:35400712-35400731 Msa1191270:CDS 30.0%
!! AGAATGTCAAGAAAGTATTG+AGG - chr8_1:35400768-35400787 Msa1191270:CDS 30.0%
GTTGATTAAGTAAACAGCTT+TGG + chr8_1:35400831-35400850 None:intergenic 30.0%
GCTGTTTACTTAATCAACAT+TGG - chr8_1:35400833-35400852 Msa1191270:CDS 30.0%
CATTGGAAGCAATGATTATT+TGG - chr8_1:35400850-35400869 Msa1191270:CDS 30.0%
! TTTTTCATGAGTGTATAAGC+TGG + chr8_1:35400885-35400904 None:intergenic 30.0%
TTTACATACTTTGATCACAG+TGG + chr8_1:35400936-35400955 None:intergenic 30.0%
!! TTCACTTTTGGTTGCAATTT+TGG - chr8_1:35401095-35401114 Msa1191270:intron 30.0%
!! TTCACTTTTGGTTGCAATTT+TGG + chr8_1:35401095-35401114 None:intergenic 30.0%
! GTATCCAAAAGTTGCAATTT+TGG + chr8_1:35402403-35402422 None:intergenic 30.0%
! ATTGCAACTTTTGGATACTT+AGG - chr8_1:35402405-35402424 Msa1191270:intron 30.0%
! TTGCAACTTTTGGATACTTA+GGG - chr8_1:35402406-35402425 Msa1191270:intron 30.0%
AGAATGTTAACTAATGCTCA+TGG - chr8_1:35402462-35402481 Msa1191270:intron 30.0%
GAATGTTAACTAATGCTCAT+GGG - chr8_1:35402463-35402482 Msa1191270:intron 30.0%
AATGTTAACTAATGCTCATG+GGG - chr8_1:35402464-35402483 Msa1191270:intron 30.0%
! ATTTAACTTCAGGGAATACA+TGG - chr8_1:35402918-35402937 Msa1191270:CDS 30.0%
! TTTAACTTCAGGGAATACAT+GGG - chr8_1:35402919-35402938 Msa1191270:CDS 30.0%
ATAAGCAACCCTTCAAAATT+TGG - chr8_1:35403167-35403186 Msa1191270:intron 30.0%
! TGCTTATAATTCATAACGGA+GGG + chr8_1:35403393-35403412 None:intergenic 30.0%
TTGCTTATAATTCATAACGG+AGG + chr8_1:35403394-35403413 None:intergenic 30.0%
GATTCATTTAATGATGTCTG+TGG - chr8_1:35403432-35403451 Msa1191270:intron 30.0%
!!! GGACTTTTTTTTTTTGGTCA+AGG + chr8_1:35403628-35403647 None:intergenic 30.0%
TTATGGTGGTAAGAAAAATG+GGG + chr8_1:35403649-35403668 None:intergenic 30.0%
GTTATGGTGGTAAGAAAAAT+GGG + chr8_1:35403650-35403669 None:intergenic 30.0%
TGTTATGGTGGTAAGAAAAA+TGG + chr8_1:35403651-35403670 None:intergenic 30.0%
AGACATTAAATCTGTTATGG+TGG + chr8_1:35403663-35403682 None:intergenic 30.0%
!! AATGGTGAGTTTTGTCATAT+AGG - chr8_1:35403830-35403849 Msa1191270:CDS 30.0%
TTGAAGAAGGTTTCACCATA+TGG + chr8_1:35399708-35399727 None:intergenic 35.0%
CTCTCAAACAATTTCACAAG+TGG + chr8_1:35399795-35399814 None:intergenic 35.0%
ATTCAACCATACCTATTTCC+TGG - chr8_1:35399954-35399973 Msa1191270:intron 35.0%
AGATAACCAGGAAATAGGTA+TGG + chr8_1:35399963-35399982 None:intergenic 35.0%
ATGGTAGATAACCAGGAAAT+AGG + chr8_1:35399968-35399987 None:intergenic 35.0%
GCTTTAGTAGAAACTCATCA+AGG - chr8_1:35400026-35400045 Msa1191270:intron 35.0%
TCTAGACAAGTAAAAACACG+AGG + chr8_1:35400132-35400151 None:intergenic 35.0%
GAATCTTCGAATTACATGGT+TGG + chr8_1:35400392-35400411 None:intergenic 35.0%
AAAATCGATGATATGACAGG+GGG + chr8_1:35400495-35400514 None:intergenic 35.0%
CAAAATCGATGATATGACAG+GGG + chr8_1:35400496-35400515 None:intergenic 35.0%
CCTGTAAAATTAGCGATTTG+CGG + chr8_1:35400608-35400627 None:intergenic 35.0%
! TCGCAACTTTTGGATACTTA+GGG + chr8_1:35401033-35401052 None:intergenic 35.0%
! ATCGCAACTTTTGGATACTT+AGG + chr8_1:35401034-35401053 None:intergenic 35.0%
! GTATCCAAAAGTTGCGATTT+TGG - chr8_1:35401036-35401055 Msa1191270:intron 35.0%
CAACCAAAAGTGAACTTAAG+GGG + chr8_1:35402349-35402368 None:intergenic 35.0%
GCAACCAAAAGTGAACTTAA+GGG + chr8_1:35402348-35402367 None:intergenic 35.0%
TGCAACCAAAAGTGAACTTA+AGG + chr8_1:35402347-35402366 None:intergenic 35.0%
TGCAACCAAAAGTGAACTTA+AGG - chr8_1:35402347-35402366 Msa1191270:intron 35.0%
GCAACCAAAAGTGAACTTAA+GGG - chr8_1:35402348-35402367 Msa1191270:intron 35.0%
CAACCAAAAGTGAACTTAAG+GGG - chr8_1:35402349-35402368 Msa1191270:intron 35.0%
! TGCAACTTTTGGATACTTAG+GGG - chr8_1:35402407-35402426 Msa1191270:intron 35.0%
ATTCTTAACCAACCATCTCT+TGG - chr8_1:35402963-35402982 Msa1191270:CDS 35.0%
TCCATTTACAAATGCCTTGA+TGG + chr8_1:35403000-35403019 None:intergenic 35.0%
TAGTTTAGTGTTGTGCACTT+TGG + chr8_1:35403063-35403082 None:intergenic 35.0%
! GTAAAATTTTCTACACCGAC+CGG + chr8_1:35403283-35403302 None:intergenic 35.0%
AATGTCTCAACCAAAACCAT+TGG - chr8_1:35403676-35403695 Msa1191270:intron 35.0%
ATGTCTCAACCAAAACCATT+GGG - chr8_1:35403677-35403696 Msa1191270:intron 35.0%
TGAAAAGGTTTGAAAGAAGC+AGG - chr8_1:35403966-35403985 Msa1191270:intron 35.0%
AACTGTAATATCCCCTGTAA+GGG + chr8_1:35404013-35404032 None:intergenic 35.0%
GGATTATATCCCAATACATG+TGG - chr8_1:35404129-35404148 Msa1191270:CDS 35.0%
ATTTCCACTCCACATGTATT+GGG + chr8_1:35404141-35404160 None:intergenic 35.0%
! AGTGGAAATCAAAGTATCAC+CGG - chr8_1:35404152-35404171 Msa1191270:CDS 35.0%
TGGGATATTACGATATGTAG+AGG - chr8_1:35404316-35404335 Msa1191270:CDS 35.0%
GGAATGCTAATTCCAACACT+TGG - chr8_1:35399567-35399586 Msa1191270:three_prime_UTR 40.0%
AGACATATGTTGCCAAGTGT+TGG + chr8_1:35399582-35399601 None:intergenic 40.0%
AGAAGGTTTCACCATATGGT+GGG + chr8_1:35399704-35399723 None:intergenic 40.0%
AAGAAGGTTTCACCATATGG+TGG + chr8_1:35399705-35399724 None:intergenic 40.0%
ACCTTCTTCAAGTATCCATC+TGG - chr8_1:35399717-35399736 Msa1191270:CDS 40.0%
ACCAGATGGATACTTGAAGA+AGG + chr8_1:35399721-35399740 None:intergenic 40.0%
CCATCAGAAAATCTACCAGA+TGG + chr8_1:35399735-35399754 None:intergenic 40.0%
! CCATCTGGTAGATTTTCTGA+TGG - chr8_1:35399732-35399751 Msa1191270:CDS 40.0%
! CGTGTCATTCCAGATTTCAT+AGG - chr8_1:35399756-35399775 Msa1191270:CDS 40.0%
AGTAGAAACTCATCAAGGAC+TGG - chr8_1:35400031-35400050 Msa1191270:intron 40.0%
! CCGCAAATCGCTAATTTTAC+AGG - chr8_1:35400605-35400624 Msa1191270:intron 40.0%
!! AAAGTATTGAGGCAGAGACT+AGG - chr8_1:35400779-35400798 Msa1191270:CDS 40.0%
! GCAACTTTTGGATACTTAGG+GGG + chr8_1:35402408-35402427 None:intergenic 40.0%
! CGCAACTTTTGGATACTTAG+GGG + chr8_1:35401032-35401051 None:intergenic 40.0%
ACTGGGTCAAAATTGTCTTG+GGG + chr8_1:35401123-35401142 None:intergenic 40.0%
GACTGGGTCAAAATTGTCTT+GGG + chr8_1:35401124-35401143 None:intergenic 40.0%
TGACTGGGTCAAAATTGTCT+TGG + chr8_1:35401125-35401144 None:intergenic 40.0%
! GCAACTTTTGGATACTTAGG+GGG - chr8_1:35402408-35402427 Msa1191270:intron 40.0%
AGAATTCCTTAACCAGTGCT+TGG - chr8_1:35402597-35402616 Msa1191270:intron 40.0%
! TTTACAAATGCCTTGATGGC+TGG + chr8_1:35402996-35403015 None:intergenic 40.0%
! GCCATCAAGGCATTTGTAAA+TGG - chr8_1:35402996-35403015 Msa1191270:CDS 40.0%
GCACAACACTAAACTATCAG+TGG - chr8_1:35403067-35403086 Msa1191270:CDS 40.0%
GCAACCCTTCAAAATTTGGT+AGG - chr8_1:35403171-35403190 Msa1191270:intron 40.0%
! AAGGAATAGCCCAATGGTTT+TGG + chr8_1:35403689-35403708 None:intergenic 40.0%
TAGTACAAATATGCGGGTCA+CGG + chr8_1:35403712-35403731 None:intergenic 40.0%
CAACTGTAATATCCCCTGTA+AGG + chr8_1:35404014-35404033 None:intergenic 40.0%
TACAGGGGATATTACAGTTG+TGG - chr8_1:35404014-35404033 Msa1191270:intron 40.0%
ATATCCCAATACATGTGGAG+TGG - chr8_1:35404134-35404153 Msa1191270:CDS 40.0%
GATTTCCACTCCACATGTAT+TGG + chr8_1:35404142-35404161 None:intergenic 40.0%
!!! AGTTTTGAGATTGTAAGGGC+CGG + chr8_1:35404174-35404193 None:intergenic 40.0%
CTGGCTAATTACCCACCATA+TGG - chr8_1:35399690-35399709 Msa1191270:CDS 45.0%
! GGAGTCAATTTTGCATCAGC+TGG - chr8_1:35399996-35400015 Msa1191270:intron 45.0%
! AATTTTGCATCAGCTGGAGC+TGG - chr8_1:35400002-35400021 Msa1191270:intron 45.0%
! ATTTTGCATCAGCTGGAGCT+GGG - chr8_1:35400003-35400022 Msa1191270:intron 45.0%
GTGTCTTTAGATCTGTCACC+TGG + chr8_1:35400733-35400752 None:intergenic 45.0%
CGAAGAAACCACAACTCTAC+TGG - chr8_1:35400805-35400824 Msa1191270:CDS 45.0%
! TGGCCCCTTAAGTTCACTTT+TGG - chr8_1:35401083-35401102 Msa1191270:intron 45.0%
TGGGTCAAAATTGTCTTGGG+GGG + chr8_1:35401121-35401140 None:intergenic 45.0%
CTGGGTCAAAATTGTCTTGG+GGG + chr8_1:35401122-35401141 None:intergenic 45.0%
!! AGCGTTGACTGGGTCAAAAT+TGG - chr8_1:35402308-35402327 Msa1191270:intron 45.0%
TGACTGGGTCAAAATTGGCT+TGG - chr8_1:35402313-35402332 Msa1191270:intron 45.0%
! GACTGGGTCAAAATTGGCTT+GGG - chr8_1:35402314-35402333 Msa1191270:intron 45.0%
!! ACTGGGTCAAAATTGGCTTG+GGG - chr8_1:35402315-35402334 Msa1191270:intron 45.0%
! TGGCCCCTTAAGTTCACTTT+TGG + chr8_1:35401083-35401102 None:intergenic 45.0%
! GGGGCCAAAATTGCAACTTT+TGG - chr8_1:35402396-35402415 Msa1191270:intron 45.0%
AACTAATGCTCATGGGGCAT+TGG - chr8_1:35402470-35402489 Msa1191270:intron 45.0%
!! TGCTAACCAAGCACTGGTTA+AGG + chr8_1:35402606-35402625 None:intergenic 45.0%
CTTCAGGGAATACATGGGAT+TGG - chr8_1:35402924-35402943 Msa1191270:CDS 45.0%
AGGGAATACATGGGATTGGA+GGG - chr8_1:35402928-35402947 Msa1191270:CDS 45.0%
GGATTGGAGGGAGGAAATTT+GGG - chr8_1:35402940-35402959 Msa1191270:CDS 45.0%
AGGTTTGAAAGAAGCAGGAG+TGG - chr8_1:35403971-35403990 Msa1191270:intron 45.0%
AGGGGATATTACAGTTGTGG+AGG - chr8_1:35404017-35404036 Msa1191270:intron 45.0%
TCTTCTCATCCTACTGAAGC+TGG - chr8_1:35404101-35404120 Msa1191270:CDS 45.0%
ATCCTACTGAAGCTGGTAGT+AGG - chr8_1:35404108-35404127 Msa1191270:CDS 45.0%
ATCCTACTACCAGCTTCAGT+AGG + chr8_1:35404113-35404132 None:intergenic 45.0%
!! AAAAAAATATTATAAAATTC+TGG - chr8_1:35401298-35401317 Msa1191270:intron 5.0%
!!! TTTAAATTTTTTTAATACTA+AGG - chr8_1:35401963-35401982 Msa1191270:intron 5.0%
!! AAAAAAATATAAAAAAATTC+TGG + chr8_1:35402096-35402115 None:intergenic 5.0%
!! AAAAAAATATTAAAAAATTC+TGG + chr8_1:35402147-35402166 None:intergenic 5.0%
!! TAAAAAATAAATAAAAATTC+TGG + chr8_1:35402237-35402256 None:intergenic 5.0%
! TTTTGCATCAGCTGGAGCTG+GGG - chr8_1:35400004-35400023 Msa1191270:intron 50.0%
! AGCTTTGGCCAGTAGAGTTG+TGG + chr8_1:35400816-35400835 None:intergenic 50.0%
! GGGGCCAAAATCGCAACTTT+TGG + chr8_1:35401043-35401062 None:intergenic 50.0%
!! CTGGGTCAAAATTGGCTTGG+GGG - chr8_1:35402316-35402335 Msa1191270:intron 50.0%
!! TGGGTCAAAATTGGCTTGGG+GGG - chr8_1:35402317-35402336 Msa1191270:intron 50.0%
!! TGCTCATGGGGCATTGGTTA+AGG - chr8_1:35402476-35402495 Msa1191270:intron 50.0%
CAGGGAATACATGGGATTGG+AGG - chr8_1:35402927-35402946 Msa1191270:CDS 50.0%
GAATACATGGGATTGGAGGG+AGG - chr8_1:35402931-35402950 Msa1191270:CDS 50.0%
GGGATTGGAGGGAGGAAATT+TGG - chr8_1:35402939-35402958 Msa1191270:CDS 50.0%
GAGAACAGCCAAGAGATGGT+TGG + chr8_1:35402974-35402993 None:intergenic 50.0%
TCACGGAAGGAATAGCCCAA+TGG + chr8_1:35403695-35403714 None:intergenic 50.0%
ACAAATATGCGGGTCACGGA+AGG + chr8_1:35403708-35403727 None:intergenic 50.0%
!! TTGTGGTAGTGGCCCTTACA+GGG - chr8_1:35403998-35404017 Msa1191270:intron 50.0%
TGACCCAGTCAACAGACACG+TGG - chr8_1:35401134-35401153 Msa1191270:intron 55.0%
GACCCAGTCAACAGACACGT+GGG - chr8_1:35401135-35401154 Msa1191270:intron 55.0%
GGGTCTTGCTAACCAAGCAC+TGG + chr8_1:35402612-35402631 None:intergenic 55.0%
GCTGGAGAACAGCCAAGAGA+TGG + chr8_1:35402978-35402997 None:intergenic 55.0%
TGGCTGTTCTCCAGCCATCA+AGG - chr8_1:35402983-35403002 Msa1191270:CDS 55.0%
GAAGCAGGAGTGGCATGTTG+TGG - chr8_1:35403981-35404000 Msa1191270:intron 55.0%
GGAGTGGCATGTTGTGGTAG+TGG - chr8_1:35403987-35404006 Msa1191270:intron 55.0%
!! GTTGTGGTAGTGGCCCTTAC+AGG - chr8_1:35403997-35404016 Msa1191270:intron 55.0%
!! TGTGGTAGTGGCCCTTACAG+GGG - chr8_1:35403999-35404018 Msa1191270:intron 55.0%
! CGCCCACGTGTCTGTTGACT+GGG + chr8_1:35401140-35401159 None:intergenic 60.0%
!! CGTCCACGTCAGCGTTGACT+GGG - chr8_1:35402298-35402317 Msa1191270:intron 60.0%
TGACCCAGTCAACGCTGACG+TGG + chr8_1:35402304-35402323 None:intergenic 60.0%
GCGCCCACGTGTCTGTTGAC+TGG + chr8_1:35401141-35401160 None:intergenic 65.0%
!! GCGTCCACGTCAGCGTTGAC+TGG - chr8_1:35402297-35402316 Msa1191270:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 35399480 35404377 35399480 ID=Msa1191270;Name=Msa1191270
chr8_1 mRNA 35399480 35404377 35399480 ID=Msa1191270-mRNA-1;Parent=Msa1191270;Name=Msa1191270-mRNA-1;_AED=0.01;_eAED=0.01;_QI=36|1|1|1|1|1|5|169|363
chr8_1 exon 35399480 35399884 35399480 ID=Msa1191270-mRNA-1:exon:11733;Parent=Msa1191270-mRNA-1
chr8_1 exon 35400669 35400927 35400669 ID=Msa1191270-mRNA-1:exon:11732;Parent=Msa1191270-mRNA-1
chr8_1 exon 35402911 35403123 35402911 ID=Msa1191270-mRNA-1:exon:11731;Parent=Msa1191270-mRNA-1
chr8_1 exon 35403805 35403926 35403805 ID=Msa1191270-mRNA-1:exon:11730;Parent=Msa1191270-mRNA-1
chr8_1 exon 35404080 35404377 35404080 ID=Msa1191270-mRNA-1:exon:11729;Parent=Msa1191270-mRNA-1
chr8_1 five_prime_UTR 35404342 35404377 35404342 ID=Msa1191270-mRNA-1:five_prime_utr;Parent=Msa1191270-mRNA-1
chr8_1 CDS 35404080 35404341 35404080 ID=Msa1191270-mRNA-1:cds;Parent=Msa1191270-mRNA-1
chr8_1 CDS 35403805 35403926 35403805 ID=Msa1191270-mRNA-1:cds;Parent=Msa1191270-mRNA-1
chr8_1 CDS 35402911 35403123 35402911 ID=Msa1191270-mRNA-1:cds;Parent=Msa1191270-mRNA-1
chr8_1 CDS 35400669 35400927 35400669 ID=Msa1191270-mRNA-1:cds;Parent=Msa1191270-mRNA-1
chr8_1 CDS 35399649 35399884 35399649 ID=Msa1191270-mRNA-1:cds;Parent=Msa1191270-mRNA-1
chr8_1 three_prime_UTR 35399480 35399648 35399480 ID=Msa1191270-mRNA-1:three_prime_utr;Parent=Msa1191270-mRNA-1
Gene Sequence

>Msa1191270

ATGGCAAGCAAAAAAATCAATTTTTGTTTCCTAATTTTCTTCTTATGTTATGGAATGCTAATTCCAACACTTGGCAACATATGTCTGCCAAAAGAACATGTTGCATTATTTGTATTTGGAGATTCATTTTTTGATGTTGGAAACAATAATTATATCAATACTACTACTGATTTTCTGGCTAATTACCCACCATATGGTGAAACCTTCTTCAAGTATCCATCTGGTAGATTTTCTGATGGACGTGTCATTCCAGATTTCATAGCTGAGTATGCTAAGTTGCCATTAATTCAACCATACCTATTTCCTGGTTATCTACCATATATTAATGGAGTCAATTTTGCATCAGCTGGAGCTGGGGCTTTAGTAGAAACTCATCAAGGACTGGTGACAGATCTAAAGACACAATTGACTTATCTGAAGAATGTCAAGAAAGTATTGAGGCAGAGACTAGGAGACGAAGAAACCACAACTCTACTGGCCAAAGCTGTTTACTTAATCAACATTGGAAGCAATGATTATTTGGTAGAAAATTCCAGCTTATACACTCATGAAAAATATGTATCAATGGTTGTTGGTAATCTTACCACTGTGATCAAAGGAATACATGGGATTGGAGGGAGGAAATTTGGGATTCTTAACCAACCATCTCTTGGCTGTTCTCCAGCCATCAAGGCATTTGTAAATGGAACTAAATCAGGTTCTTGCATTGAAGAGTATTCAGCACTTGCCAAAGTGCACAACACTAAACTATCAGTGGAACTTAAGAATTTAACGAAACAGATCAAAGGATTTAAATATTCATATTTTGATTTATATGATCTATCTTTTGAAGTCATAAGCAACCCTTCAAAATTTGGTTTGAAAGAAGCAGGAGTGGCATGTTGTGGTAGTGGCCCTTACAGGGGATATTACAGTTGTGGAGGTAAAAGAGAAGTAAAAGATTATGACTTGTGTGACAATCCTTCTGAATATTTGTTCTTTGACTCTTCTCATCCTACTGAAGCTGGTAGTAGGATTATATCCCAATACATGTGGAGTGGAAATCAAAGTATCACCGGCCCTTACAATCTCAAAACTCTATTTGAAGAATAA
Protein sequence

>Msa1191270

MASKKINFCFLIFFLCYGMLIPTLGNICLPKEHVALFVFGDSFFDVGNNNYINTTTDFLANYPPYGETFFKYPSGRFSDGRVIPDFIAEYAKLPLIQPYLFPGYLPYINGVNFASAGAGALVETHQGLVTDLKTQLTYLKNVKKVLRQRLGDEETTTLLAKAVYLINIGSNDYLVENSSLYTHEKYVSMVVGNLTTVIKGIHGIGGRKFGILNQPSLGCSPAIKAFVNGTKSGSCIEEYSALAKVHNTKLSVELKNLTKQIKGFKYSYFDLYDLSFEVISNPSKFGLKEAGVACCGSGPYRGYYSCGGKREVKDYDLCDNPSEYLFFDSSHPTEAGSRIISQYMWSGNQSITGPYNLKTLFEE*