AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1040330


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1040330 MtrunA17_Chr7g0271211 97.196 214 6 0 1 214 1 214 2.12e-150 416
Msa1040330 MtrunA17_Chr1g0193421 78.392 199 43 0 16 214 20 218 9.60e-113 321
Msa1040330 MtrunA17_Chr1g0193671 65.700 207 71 0 8 214 11 217 1.27e-94 275
Msa1040330 MtrunA17_Chr4g0007041 46.047 215 109 3 1 210 3 215 4.78e-56 177
Msa1040330 MtrunA17_Chr6g0449731 48.113 212 104 3 4 211 6 215 5.46e-56 177
Msa1040330 MtrunA17_Chr6g0449761 48.113 212 104 3 4 211 6 215 5.51e-56 178
Msa1040330 MtrunA17_Chr6g0449751 48.792 207 100 3 9 211 11 215 7.90e-56 177
Msa1040330 MtrunA17_Chr1g0189841 45.833 216 111 3 1 211 3 217 9.99e-56 176
Msa1040330 MtrunA17_Chr4g0007051 45.581 215 110 3 1 210 3 215 2.07e-55 176
Msa1040330 MtrunA17_Chr4g0007031 45.581 215 110 3 1 210 3 215 2.10e-55 176
Msa1040330 MtrunA17_Chr5g0419971 45.581 215 110 3 1 210 3 215 2.10e-55 176
Msa1040330 MtrunA17_Chr5g0419981 45.581 215 110 3 1 210 3 215 2.10e-55 176
Msa1040330 MtrunA17_Chr6g0449771 47.642 212 105 3 4 211 6 215 3.21e-55 175
Msa1040330 MtrunA17_Chr2g0285871 45.581 215 110 3 1 210 3 215 4.53e-55 175
Msa1040330 MtrunA17_Chr5g0414971 45.641 195 105 1 19 212 26 220 1.13e-54 174
Msa1040330 MtrunA17_Chr1g0210761 43.810 210 105 5 9 213 8 209 6.32e-53 169
Msa1040330 MtrunA17_Chr6g0449791 50.829 181 82 3 24 199 26 204 7.25e-50 161
Msa1040330 MtrunA17_Chr1g0156131 42.453 212 114 2 2 211 4 209 4.96e-49 159
Msa1040330 MtrunA17_Chr6g0449781 43.961 207 109 4 9 211 11 214 5.13e-47 154
Msa1040330 MtrunA17_Chr2g0292831 44.103 195 104 2 19 211 21 212 2.70e-46 152
Msa1040330 MtrunA17_Chr2g0292901 43.158 190 103 2 24 211 27 213 5.23e-44 146
Msa1040330 MtrunA17_Chr1g0178711 38.073 218 125 4 4 214 10 224 1.05e-43 146
Msa1040330 MtrunA17_Chr2g0292861 43.605 172 94 2 43 211 7 178 2.63e-40 135
Msa1040330 MtrunA17_Chr3g0130241 40.513 195 97 4 19 211 88 265 3.65e-40 139
Msa1040330 MtrunA17_Chr2g0292841 43.605 172 94 2 43 211 7 178 1.38e-39 134
Msa1040330 MtrunA17_Chr8g0343934 37.559 213 128 4 2 214 1 208 2.27e-39 134
Msa1040330 MtrunA17_Chr8g0335851 45.562 169 89 2 19 185 25 192 4.37e-39 134
Msa1040330 MtrunA17_Chr8g0343954 38.542 192 114 3 23 214 21 208 1.32e-38 132
Msa1040330 MtrunA17_Chr2g0313961 37.745 204 123 3 8 211 6 205 1.86e-38 132
Msa1040330 MtrunA17_Chr8g0343961 37.089 213 129 4 2 214 1 208 2.48e-38 131
Msa1040330 MtrunA17_Chr8g0343911 37.438 203 125 1 9 211 4 204 3.10e-38 131
Msa1040330 MtrunA17_Chr2g0302171 37.441 211 127 4 2 212 1 206 2.19e-37 129
Msa1040330 MtrunA17_Chr2g0300581 40.107 187 110 1 26 212 23 207 3.98e-37 128
Msa1040330 MtrunA17_Chr2g0301611 36.967 211 128 4 2 212 1 206 6.43e-37 128
Msa1040330 MtrunA17_Chr2g0297231 36.493 211 129 4 2 212 1 206 7.12e-37 127
Msa1040330 MtrunA17_Chr2g0300591 39.153 189 113 1 26 214 23 209 1.68e-36 127
Msa1040330 MtrunA17_Chr2g0300561 40.323 186 109 1 26 211 23 206 5.44e-36 125
Msa1040330 MtrunA17_Chr3g0084531 35.545 211 131 4 2 212 1 206 1.45e-35 124
Msa1040330 MtrunA17_Chr2g0297241 36.019 211 130 4 2 212 1 206 2.17e-35 124
Msa1040330 MtrunA17_Chr2g0302541 38.421 190 113 3 23 212 21 206 2.46e-35 124
Msa1040330 MtrunA17_Chr2g0292911 52.941 119 54 1 43 159 7 125 1.55e-34 120
Msa1040330 MtrunA17_Chr3g0084511 34.597 211 132 4 2 212 1 205 2.58e-34 121
Msa1040330 MtrunA17_Chr4g0003361 40.196 204 114 5 8 211 6 201 3.36e-34 121
Msa1040330 MtrunA17_Chr4g0012651 38.624 189 112 3 24 212 22 206 4.20e-34 120
Msa1040330 MtrunA17_Chr7g0217811 38.095 189 113 3 24 212 22 206 4.24e-34 120
Msa1040330 MtrunA17_Chr5g0411961 32.701 211 137 4 2 212 1 206 1.68e-33 119
Msa1040330 MtrunA17_Chr3g0084521 35.545 211 130 5 2 212 1 205 3.32e-33 118
Msa1040330 MtrunA17_Chr8g0344051 39.560 182 105 4 2 182 1 178 2.79e-32 116
Msa1040330 MtrunA17_Chr2g0321581 44.776 134 71 2 76 208 70 201 9.22e-32 114
Msa1040330 MtrunA17_Chr2g0321591 44.776 134 71 2 76 208 70 201 1.13e-31 114
Msa1040330 MtrunA17_Chr8g0344021 41.176 170 98 2 2 170 1 169 2.69e-31 114
Msa1040330 MtrunA17_Chr2g0321601 36.842 209 115 6 1 208 8 200 3.28e-31 113
Msa1040330 MtrunA17_Chr8g0343921 36.932 176 108 2 8 183 5 177 3.38e-31 113
Msa1040330 MtrunA17_Chr4g0026201 41.045 134 76 2 76 208 71 202 2.66e-30 110
Msa1040330 MtrunA17_Chr4g0026191 41.045 134 76 2 76 208 71 202 2.72e-30 110
Msa1040330 MtrunA17_Chr8g0344041 39.645 169 97 4 2 169 5 169 7.75e-29 107
Msa1040330 MtrunA17_Chr8g0344031 38.235 170 103 2 1 170 1 168 5.40e-26 100
Msa1040330 MtrunA17_Chr3g0115141 34.574 188 115 5 25 211 26 206 2.49e-24 95.5
Msa1040330 MtrunA17_Chr3g0084551 32.075 212 123 7 2 208 1 196 1.44e-22 91.7
Msa1040330 MtrunA17_Chr2g0286171 30.047 213 140 6 1 211 3 208 3.70e-22 90.1
Msa1040330 MtrunA17_Chr3g0084501 42.991 107 59 2 2 108 1 105 3.50e-20 82.0
Msa1040330 MtrunA17_Chr2g0292881 56.140 57 23 1 91 145 1 57 1.74e-13 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1040330 AT1G09560.1 71.357 199 57 0 16 214 20 218 3.97e-98 284
Msa1040330 AT3G62020.1 67.633 207 65 2 10 214 12 218 7.61e-96 278
Msa1040330 AT1G02335.1 61.836 207 78 1 9 214 12 218 2.99e-89 262
Msa1040330 AT3G62020.2 67.956 181 57 1 35 214 9 189 5.79e-86 253
Msa1040330 AT5G26700.1 57.143 196 81 1 19 214 20 212 1.57e-76 229
Msa1040330 AT3G05930.1 53.140 207 96 1 9 214 12 218 1.96e-73 222
Msa1040330 AT1G18970.1 49.756 205 101 1 8 212 17 219 1.92e-63 196
Msa1040330 AT1G18980.1 50.254 197 96 1 16 212 25 219 3.39e-61 191
Msa1040330 AT5G39110.1 46.818 220 107 3 2 211 1 220 2.24e-60 189
Msa1040330 AT5G39150.1 47.489 219 106 3 2 211 1 219 2.32e-60 189
Msa1040330 AT3G05950.1 50.698 215 100 3 4 212 8 222 4.84e-60 188
Msa1040330 AT5G39120.1 47.032 219 107 3 2 211 1 219 1.29e-59 187
Msa1040330 AT5G39180.1 47.032 219 107 3 2 211 1 219 1.51e-59 186
Msa1040330 AT5G39160.1 46.411 209 108 2 8 212 12 220 4.37e-59 185
Msa1040330 AT5G39190.1 46.411 209 108 2 8 212 12 220 7.37e-59 185
Msa1040330 AT5G39130.1 46.411 209 108 2 8 212 12 220 1.37e-58 184
Msa1040330 AT4G14630.1 48.387 217 105 3 2 211 6 222 1.61e-58 184
Msa1040330 AT3G04200.1 47.768 224 106 4 1 213 1 224 6.35e-58 182
Msa1040330 AT5G39160.3 45.714 210 104 3 8 212 12 216 9.01e-56 177
Msa1040330 AT5G38960.1 47.805 205 102 3 13 212 19 223 2.24e-55 176
Msa1040330 AT5G38910.1 46.154 208 108 2 8 211 12 219 2.79e-55 176
Msa1040330 AT5G38940.1 47.208 197 100 2 19 211 25 221 3.89e-52 167
Msa1040330 AT5G38940.2 47.208 197 100 2 19 211 49 245 4.98e-52 168
Msa1040330 AT5G38930.1 46.500 200 103 2 16 211 22 221 6.14e-52 167
Msa1040330 AT5G39160.2 42.381 210 93 3 8 212 12 198 1.16e-49 160
Msa1040330 AT5G39190.2 42.381 210 93 3 8 212 12 198 1.41e-49 160
Msa1040330 AT3G04170.1 43.318 217 114 4 4 214 8 221 2.93e-49 160
Msa1040330 AT3G04150.1 42.791 215 114 4 4 209 8 222 1.43e-48 159
Msa1040330 AT3G04150.2 40.351 228 114 4 4 209 8 235 7.92e-48 157
Msa1040330 AT3G04190.1 43.814 194 105 2 20 209 26 219 1.64e-47 156
Msa1040330 AT3G04180.1 42.784 194 107 2 20 209 26 219 4.30e-47 155
Msa1040330 AT1G10460.1 41.000 200 113 3 17 211 16 215 4.44e-46 152
Msa1040330 AT5G61750.1 41.011 178 103 1 2 177 1 178 3.14e-43 144
Msa1040330 AT3G10080.1 37.931 203 118 4 16 213 22 221 2.99e-41 140
Msa1040330 AT3G10080.2 37.931 203 118 4 16 213 93 292 1.65e-40 140
Msa1040330 AT1G74820.1 39.894 188 111 1 24 211 40 225 1.72e-40 138
Msa1040330 AT5G20630.1 37.441 211 129 2 2 212 1 208 1.76e-38 132
Msa1040330 AT5G38910.2 37.864 206 91 2 8 211 12 182 4.56e-36 125
Msa1040330 AT1G72610.1 37.895 190 116 1 23 212 18 205 1.11e-35 125
Msa1040330 AT5G38950.1 42.857 63 36 0 140 202 2 64 4.58e-11 58.2

Find 83 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAATGCGTGCTTGTTATTT+TGG 0.110979 7_1:+77687160 Msa1040330:three_prime_UTR
GAACTTCCTTGGTACCAATT+TGG 0.208001 7_1:-77686949 None:intergenic
CCTCGCAGGGTTGTTGCTTC+TGG 0.229387 7_1:+77685761 Msa1040330:CDS
GTACATAACCACTGTTCTTT+TGG 0.233211 7_1:-77686814 None:intergenic
TTGTCTTGCCTACATATAAT+TGG 0.267421 7_1:+77685682 Msa1040330:five_prime_UTR
CAAAATAACAAGCACGCATT+AGG 0.285694 7_1:-77687159 None:intergenic
TGGAAATGAACCAATCCTTT+AGG 0.302524 7_1:-77686794 None:intergenic
TTGACTCAAGCATTCCAAAT+TGG 0.317621 7_1:+77686935 Msa1040330:CDS
TTTGGAACTCATAAAACAAT+TGG 0.322743 7_1:+77687087 Msa1040330:three_prime_UTR
GCAAGAATTAATATAGTATA+AGG 0.331801 7_1:-77685536 None:intergenic
GCTTGAGTCAAAATATTATC+TGG 0.334327 7_1:-77686923 None:intergenic
GTTGATTTACATTTCATGTT+TGG 0.338674 7_1:+77687069 Msa1040330:three_prime_UTR
GATATCAAAGACTATTGTTA+AGG 0.351789 7_1:+77686754 Msa1040330:CDS
TGTGTTGCAGACCTTGCTTC+TGG 0.354120 7_1:+77685831 Msa1040330:CDS
CTCTCTTCCAAGTCTTCTCT+TGG 0.370804 7_1:+77685581 Msa1040330:five_prime_UTR
CAATCCTTGATCTCACTACT+TGG 0.371152 7_1:-77686996 None:intergenic
TTGGAACTCATAAAACAATT+GGG 0.383345 7_1:+77687088 Msa1040330:three_prime_UTR
GTTGTTTGTGGCTCCTGGTT+TGG 0.387912 7_1:-77686537 None:intergenic
GTACCTGCTGCAGTAATTGC+AGG 0.389830 7_1:+77686833 Msa1040330:CDS
AAAATAACAAGCACGCATTA+GGG 0.397015 7_1:-77687158 None:intergenic
ATATCAAAGACTATTGTTAA+GGG 0.409296 7_1:+77686755 Msa1040330:CDS
CAACACACTTGGTGTGTCAT+TGG 0.413477 7_1:+77686610 Msa1040330:CDS
TTAACAGCGATTCTAGTGAA+TGG 0.422863 7_1:+77686455 Msa1040330:intron
TTGAAGGTCAATTAGATGTT+GGG 0.424187 7_1:+77686708 Msa1040330:CDS
AATGTGTTGTTTGTGGCTCC+TGG 0.432005 7_1:-77686542 None:intergenic
CACCAAGTGTGTTGAGTCCT+GGG 0.432787 7_1:-77686601 None:intergenic
GAAACATTTGTGTTTCCTAA+AGG 0.432964 7_1:+77686779 Msa1040330:CDS
GTCAAAATATTATCTGGAAC+AGG 0.434168 7_1:-77686917 None:intergenic
GAGATTGTGTTTGTTCTTGA+AGG 0.435097 7_1:+77686692 Msa1040330:CDS
GGAGCCACAAACAACACATT+TGG 0.436644 7_1:+77686545 Msa1040330:CDS
CTTGAAGGTCAATTAGATGT+TGG 0.439258 7_1:+77686707 Msa1040330:CDS
GAGCAATTTGAATTATGAGT+TGG 0.443350 7_1:-77685636 None:intergenic
TTTGAAAACCAATTATATGT+AGG 0.446939 7_1:-77685690 None:intergenic
ATTTGTGTTTCCTAAAGGAT+TGG 0.463106 7_1:+77686784 Msa1040330:CDS
TCTTCTCACTTAAAATAAAG+TGG 0.475636 7_1:-77685511 None:intergenic
AACATTGGCTAAGGTTACTA+AGG 0.477034 7_1:-77686570 None:intergenic
ACAGAGGTCTTGAAGATTGT+CGG 0.481708 7_1:-77685811 None:intergenic
CAGAGGTCTTGAAGATTGTC+GGG 0.482659 7_1:-77685810 None:intergenic
GTAGAAGCAAACAAAGTAAG+AGG 0.485526 7_1:-77686890 None:intergenic
TGGTTTGGCTAGTACGTTGG+TGG 0.495482 7_1:-77686522 None:intergenic
GAGTTGGAATGAAGTGGTAA+TGG 0.496464 7_1:-77685620 None:intergenic
TCGGTGACAAACAAATTAAC+CGG 0.501973 7_1:-77685718 None:intergenic
TCCTGGTTTGGCTAGTACGT+TGG 0.504209 7_1:-77686525 None:intergenic
GCTTCATCATTTGTTATGAT+CGG 0.509664 7_1:-77685737 None:intergenic
AGTTGGAATGAAGTGGTAAT+GGG 0.516652 7_1:-77685619 None:intergenic
GAAATCAGCTGCGGTTACAT+TGG 0.516657 7_1:-77686498 None:intergenic
AATCCTGCAATTACTGCAGC+AGG 0.520151 7_1:-77686836 None:intergenic
GCTGCGGTTACATTGGAAGC+TGG 0.520487 7_1:-77686491 None:intergenic
ACACCAAGTGTGTTGAGTCC+TGG 0.524633 7_1:-77686602 None:intergenic
GGAACCAAATGTGTTGTTTG+TGG 0.527740 7_1:-77686549 None:intergenic
TGGAAGAGAGACAGAAGACT+TGG 0.528749 7_1:-77685568 None:intergenic
GCACCCAAGTAGTGAGATCA+AGG 0.528959 7_1:+77686992 Msa1040330:exon
CAAATGATGAAGCTCCTCGC+AGG 0.535137 7_1:+77685747 Msa1040330:exon
TACAAATTTCAATCAACCAA+AGG 0.542939 7_1:-77687131 None:intergenic
ATTTATACCAAGAGAAGACT+TGG 0.545538 7_1:-77685588 None:intergenic
GCACGTGGGTGAGTGTGTGG+TGG 0.552077 7_1:-77686665 None:intergenic
GCCAATGTTCAGAAAATCCC+AGG 0.563692 7_1:+77686584 Msa1040330:CDS
CACGTGGGTGAGTGTGTGGT+GGG 0.569680 7_1:-77686664 None:intergenic
ATCCCAGGACTCAACACACT+TGG 0.570656 7_1:+77686599 Msa1040330:CDS
AAGTTCAGAAAATCAAGTCT+AGG 0.576600 7_1:+77686966 Msa1040330:CDS
ACAGTTTAAATAAACGTGTA+CGG 0.581979 7_1:+77687254 Msa1040330:three_prime_UTR
AAATGATGAAGCTCCTCGCA+GGG 0.586522 7_1:+77685748 Msa1040330:exon
AGCATTCCAAATTGGTACCA+AGG 0.587841 7_1:+77686943 Msa1040330:CDS
TGGAACTCATAAAACAATTG+GGG 0.593765 7_1:+77687089 Msa1040330:three_prime_UTR
AATCCTTGATCTCACTACTT+GGG 0.605443 7_1:-77686995 None:intergenic
CAATAGTCAATTGCAAGGAA+CGG 0.606871 7_1:+77686859 Msa1040330:CDS
AACACAATCTCAGTTGCACG+TGG 0.610170 7_1:-77686680 None:intergenic
AATTATGAGTTGGAATGAAG+TGG 0.610559 7_1:-77685626 None:intergenic
ACCAACGTACTAGCCAAACC+AGG 0.618402 7_1:+77686524 Msa1040330:CDS
CGTATTGACTATGCTGTAGG+TGG 0.621828 7_1:+77686635 Msa1040330:CDS
GTTCATTTCCAAAAGAACAG+TGG 0.623665 7_1:+77686806 Msa1040330:CDS
AAAATATTATCTGGAACAGG+TGG 0.624953 7_1:-77686914 None:intergenic
ATGTAACGGTACCAGAAGCA+AGG 0.638804 7_1:-77685842 None:intergenic
CAAAGTTAAATAAAATGCAG+AGG 0.642749 7_1:-77687047 None:intergenic
GGATTCAATAGTCAATTGCA+AGG 0.643876 7_1:+77686854 Msa1040330:CDS
GCACGTATTGACTATGCTGT+AGG 0.654744 7_1:+77686632 Msa1040330:CDS
GTTGCACGTGGGTGAGTGTG+TGG 0.656141 7_1:-77686668 None:intergenic
GTCGGGATCAGCAGTGACAG+AGG 0.662254 7_1:-77685793 None:intergenic
CCAGAAGCAACAACCCTGCG+AGG 0.671018 7_1:-77685761 None:intergenic
GGGATCAGCAGTGACAGAGG+TGG 0.687303 7_1:-77685790 None:intergenic
GTTGGTGGAGAAATCAGCTG+CGG 0.730459 7_1:-77686507 None:intergenic
ACACAATCTCAGTTGCACGT+GGG 0.741428 7_1:-77686679 None:intergenic
AAGCAAGGTCTGCAACACAG+AGG 0.751663 7_1:-77685827 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAATATAAGAAAG+AGG - chr7_1:77686049-77686068 None:intergenic 10.0%
!! AAAAAAAAAATATAAGAAAG+AGG - chr7_1:77686049-77686068 None:intergenic 10.0%
!! ATAAACAAGCTATATAAAAA+AGG - chr7_1:77685661-77685680 None:intergenic 15.0%
!! AAAGTTAATCATATTCATAT+AGG - chr7_1:77686176-77686195 None:intergenic 15.0%
!! GATACTATTATAAAAGATAA+GGG - chr7_1:77686210-77686229 None:intergenic 15.0%
!! TGATACTATTATAAAAGATA+AGG - chr7_1:77686211-77686230 None:intergenic 15.0%
!! ATAAACAAGCTATATAAAAA+AGG - chr7_1:77685661-77685680 None:intergenic 15.0%
!! AAAGTTAATCATATTCATAT+AGG - chr7_1:77686176-77686195 None:intergenic 15.0%
!! GATACTATTATAAAAGATAA+GGG - chr7_1:77686210-77686229 None:intergenic 15.0%
!! TGATACTATTATAAAAGATA+AGG - chr7_1:77686211-77686230 None:intergenic 15.0%
!! GCAAGAATTAATATAGTATA+AGG - chr7_1:77685539-77685558 None:intergenic 20.0%
!! TTTGAAAACCAATTATATGT+AGG - chr7_1:77685693-77685712 None:intergenic 20.0%
!! TTAATCATATTCATATAGGT+GGG - chr7_1:77686172-77686191 None:intergenic 20.0%
!! ATATCAAAGACTATTGTTAA+GGG + chr7_1:77686755-77686774 Msa1040330:CDS 20.0%
!!! TTGTTATTTTTGCAATTATG+TGG + chr7_1:77687196-77687215 Msa1040330:three_prime_UTR 20.0%
!! GCAAGAATTAATATAGTATA+AGG - chr7_1:77685539-77685558 None:intergenic 20.0%
!! TTTGAAAACCAATTATATGT+AGG - chr7_1:77685693-77685712 None:intergenic 20.0%
!! TTAATCATATTCATATAGGT+GGG - chr7_1:77686172-77686191 None:intergenic 20.0%
!! ATATCAAAGACTATTGTTAA+GGG + chr7_1:77686755-77686774 Msa1040330:CDS 20.0%
!!! TTGTTATTTTTGCAATTATG+TGG + chr7_1:77687196-77687215 Msa1040330:three_prime_UTR 20.0%
! TCTTCTCACTTAAAATAAAG+TGG - chr7_1:77685514-77685533 None:intergenic 25.0%
! GTACTTAGCAACATTAATTA+TGG + chr7_1:77685956-77685975 Msa1040330:intron 25.0%
! GGAAAAAGTGAAAATGAAAA+GGG - chr7_1:77686007-77686026 None:intergenic 25.0%
! GGATTGCATATAATGATTAA+GGG - chr7_1:77686028-77686047 None:intergenic 25.0%
! AGGATTGCATATAATGATTA+AGG - chr7_1:77686029-77686048 None:intergenic 25.0%
! TCAATAAAAAGCCATATCAA+AGG - chr7_1:77686119-77686138 None:intergenic 25.0%
! GTTAATCATATTCATATAGG+TGG - chr7_1:77686173-77686192 None:intergenic 25.0%
!! CATATTATTGATAGCATGAT+TGG + chr7_1:77686302-77686321 Msa1040330:intron 25.0%
! TTCTTGTCTTACAATTCTTA+TGG + chr7_1:77686387-77686406 Msa1040330:intron 25.0%
! TTATGGTTGAATTATTGTGA+TGG + chr7_1:77686404-77686423 Msa1040330:intron 25.0%
! GATATCAAAGACTATTGTTA+AGG + chr7_1:77686754-77686773 Msa1040330:CDS 25.0%
! CAAAGTTAAATAAAATGCAG+AGG - chr7_1:77687050-77687069 None:intergenic 25.0%
!! GTTGATTTACATTTCATGTT+TGG + chr7_1:77687069-77687088 Msa1040330:three_prime_UTR 25.0%
!! TTTGGAACTCATAAAACAAT+TGG + chr7_1:77687087-77687106 Msa1040330:three_prime_UTR 25.0%
! TTGGAACTCATAAAACAATT+GGG + chr7_1:77687088-77687107 Msa1040330:three_prime_UTR 25.0%
!! GTTCAATATTCATTTTCCTT+TGG + chr7_1:77687115-77687134 Msa1040330:three_prime_UTR 25.0%
! TACAAATTTCAATCAACCAA+AGG - chr7_1:77687134-77687153 None:intergenic 25.0%
! ACAGTTTAAATAAACGTGTA+CGG + chr7_1:77687254-77687273 Msa1040330:three_prime_UTR 25.0%
! TCTTCTCACTTAAAATAAAG+TGG - chr7_1:77685514-77685533 None:intergenic 25.0%
! GTACTTAGCAACATTAATTA+TGG + chr7_1:77685956-77685975 Msa1040330:intron 25.0%
! GGAAAAAGTGAAAATGAAAA+GGG - chr7_1:77686007-77686026 None:intergenic 25.0%
! GGATTGCATATAATGATTAA+GGG - chr7_1:77686028-77686047 None:intergenic 25.0%
! AGGATTGCATATAATGATTA+AGG - chr7_1:77686029-77686048 None:intergenic 25.0%
! TCAATAAAAAGCCATATCAA+AGG - chr7_1:77686119-77686138 None:intergenic 25.0%
! GTTAATCATATTCATATAGG+TGG - chr7_1:77686173-77686192 None:intergenic 25.0%
!! CATATTATTGATAGCATGAT+TGG + chr7_1:77686302-77686321 Msa1040330:intron 25.0%
! TTCTTGTCTTACAATTCTTA+TGG + chr7_1:77686387-77686406 Msa1040330:intron 25.0%
! TTATGGTTGAATTATTGTGA+TGG + chr7_1:77686404-77686423 Msa1040330:intron 25.0%
! GATATCAAAGACTATTGTTA+AGG + chr7_1:77686754-77686773 Msa1040330:CDS 25.0%
! CAAAGTTAAATAAAATGCAG+AGG - chr7_1:77687050-77687069 None:intergenic 25.0%
!! GTTGATTTACATTTCATGTT+TGG + chr7_1:77687069-77687088 Msa1040330:three_prime_UTR 25.0%
!! TTTGGAACTCATAAAACAAT+TGG + chr7_1:77687087-77687106 Msa1040330:three_prime_UTR 25.0%
! TTGGAACTCATAAAACAATT+GGG + chr7_1:77687088-77687107 Msa1040330:three_prime_UTR 25.0%
!! GTTCAATATTCATTTTCCTT+TGG + chr7_1:77687115-77687134 Msa1040330:three_prime_UTR 25.0%
! TACAAATTTCAATCAACCAA+AGG - chr7_1:77687134-77687153 None:intergenic 25.0%
! ACAGTTTAAATAAACGTGTA+CGG + chr7_1:77687254-77687273 Msa1040330:three_prime_UTR 25.0%
ATTTATACCAAGAGAAGACT+TGG - chr7_1:77685591-77685610 None:intergenic 30.0%
! AATTATGAGTTGGAATGAAG+TGG - chr7_1:77685629-77685648 None:intergenic 30.0%
GAGCAATTTGAATTATGAGT+TGG - chr7_1:77685639-77685658 None:intergenic 30.0%
TTGTCTTGCCTACATATAAT+TGG + chr7_1:77685682-77685701 Msa1040330:five_prime_UTR 30.0%
!!! AATTGGTTTTCAAAAGTCTC+CGG + chr7_1:77685699-77685718 Msa1040330:five_prime_UTR 30.0%
!! GCTTCATCATTTGTTATGAT+CGG - chr7_1:77685740-77685759 None:intergenic 30.0%
TTAATTATGGATCGAAAAGC+TGG + chr7_1:77685969-77685988 Msa1040330:intron 30.0%
GGGAAAAAGTGAAAATGAAA+AGG - chr7_1:77686008-77686027 None:intergenic 30.0%
ATCCAACTAACTCTCTAATT+AGG + chr7_1:77686083-77686102 Msa1040330:intron 30.0%
CTTCAGAAAGACACTATAAT+TGG - chr7_1:77686239-77686258 None:intergenic 30.0%
CAATTATAGTGTCTTTCTGA+AGG + chr7_1:77686237-77686256 Msa1040330:intron 30.0%
TTGAAGGTCAATTAGATGTT+GGG + chr7_1:77686708-77686727 Msa1040330:CDS 30.0%
GAAACATTTGTGTTTCCTAA+AGG + chr7_1:77686779-77686798 Msa1040330:CDS 30.0%
ATTTGTGTTTCCTAAAGGAT+TGG + chr7_1:77686784-77686803 Msa1040330:CDS 30.0%
! AAAATATTATCTGGAACAGG+TGG - chr7_1:77686917-77686936 None:intergenic 30.0%
! GTCAAAATATTATCTGGAAC+AGG - chr7_1:77686920-77686939 None:intergenic 30.0%
GCTTGAGTCAAAATATTATC+TGG - chr7_1:77686926-77686945 None:intergenic 30.0%
AAGTTCAGAAAATCAAGTCT+AGG + chr7_1:77686966-77686985 Msa1040330:CDS 30.0%
TGGAACTCATAAAACAATTG+GGG + chr7_1:77687089-77687108 Msa1040330:three_prime_UTR 30.0%
AAAATAACAAGCACGCATTA+GGG - chr7_1:77687161-77687180 None:intergenic 30.0%
ATTTATACCAAGAGAAGACT+TGG - chr7_1:77685591-77685610 None:intergenic 30.0%
! AATTATGAGTTGGAATGAAG+TGG - chr7_1:77685629-77685648 None:intergenic 30.0%
GAGCAATTTGAATTATGAGT+TGG - chr7_1:77685639-77685658 None:intergenic 30.0%
TTGTCTTGCCTACATATAAT+TGG + chr7_1:77685682-77685701 Msa1040330:five_prime_UTR 30.0%
!!! AATTGGTTTTCAAAAGTCTC+CGG + chr7_1:77685699-77685718 Msa1040330:five_prime_UTR 30.0%
!! GCTTCATCATTTGTTATGAT+CGG - chr7_1:77685740-77685759 None:intergenic 30.0%
TTAATTATGGATCGAAAAGC+TGG + chr7_1:77685969-77685988 Msa1040330:intron 30.0%
GGGAAAAAGTGAAAATGAAA+AGG - chr7_1:77686008-77686027 None:intergenic 30.0%
ATCCAACTAACTCTCTAATT+AGG + chr7_1:77686083-77686102 Msa1040330:intron 30.0%
CTTCAGAAAGACACTATAAT+TGG - chr7_1:77686239-77686258 None:intergenic 30.0%
CAATTATAGTGTCTTTCTGA+AGG + chr7_1:77686237-77686256 Msa1040330:intron 30.0%
TTGAAGGTCAATTAGATGTT+GGG + chr7_1:77686708-77686727 Msa1040330:CDS 30.0%
GAAACATTTGTGTTTCCTAA+AGG + chr7_1:77686779-77686798 Msa1040330:CDS 30.0%
ATTTGTGTTTCCTAAAGGAT+TGG + chr7_1:77686784-77686803 Msa1040330:CDS 30.0%
! AAAATATTATCTGGAACAGG+TGG - chr7_1:77686917-77686936 None:intergenic 30.0%
! GTCAAAATATTATCTGGAAC+AGG - chr7_1:77686920-77686939 None:intergenic 30.0%
GCTTGAGTCAAAATATTATC+TGG - chr7_1:77686926-77686945 None:intergenic 30.0%
AAGTTCAGAAAATCAAGTCT+AGG + chr7_1:77686966-77686985 Msa1040330:CDS 30.0%
TGGAACTCATAAAACAATTG+GGG + chr7_1:77687089-77687108 Msa1040330:three_prime_UTR 30.0%
AAAATAACAAGCACGCATTA+GGG - chr7_1:77687161-77687180 None:intergenic 30.0%
AGTTGGAATGAAGTGGTAAT+GGG - chr7_1:77685622-77685641 None:intergenic 35.0%
TCGGTGACAAACAAATTAAC+CGG - chr7_1:77685721-77685740 None:intergenic 35.0%
! AAAAGCCATATCAAAGGTGT+TGG - chr7_1:77686113-77686132 None:intergenic 35.0%
! CGATCGATATACTTGTTTCT+TGG + chr7_1:77686355-77686374 Msa1040330:intron 35.0%
TGGTTGAATTATTGTGATGG+TGG + chr7_1:77686407-77686426 Msa1040330:intron 35.0%
TTAACAGCGATTCTAGTGAA+TGG + chr7_1:77686455-77686474 Msa1040330:intron 35.0%
! AACATTGGCTAAGGTTACTA+AGG - chr7_1:77686573-77686592 None:intergenic 35.0%
!! GATTTTCTGAACATTGGCTA+AGG - chr7_1:77686582-77686601 None:intergenic 35.0%
GAGATTGTGTTTGTTCTTGA+AGG + chr7_1:77686692-77686711 Msa1040330:CDS 35.0%
CTTGAAGGTCAATTAGATGT+TGG + chr7_1:77686707-77686726 Msa1040330:CDS 35.0%
TGGAAATGAACCAATCCTTT+AGG - chr7_1:77686797-77686816 None:intergenic 35.0%
GTTCATTTCCAAAAGAACAG+TGG + chr7_1:77686806-77686825 Msa1040330:CDS 35.0%
! GTACATAACCACTGTTCTTT+TGG - chr7_1:77686817-77686836 None:intergenic 35.0%
GGATTCAATAGTCAATTGCA+AGG + chr7_1:77686854-77686873 Msa1040330:CDS 35.0%
CAATAGTCAATTGCAAGGAA+CGG + chr7_1:77686859-77686878 Msa1040330:CDS 35.0%
GTAGAAGCAAACAAAGTAAG+AGG - chr7_1:77686893-77686912 None:intergenic 35.0%
TTGACTCAAGCATTCCAAAT+TGG + chr7_1:77686935-77686954 Msa1040330:CDS 35.0%
! CTTGATTTTCTGAACTTCCT+TGG - chr7_1:77686963-77686982 None:intergenic 35.0%
AATCCTTGATCTCACTACTT+GGG - chr7_1:77686998-77687017 None:intergenic 35.0%
CAAAATAACAAGCACGCATT+AGG - chr7_1:77687162-77687181 None:intergenic 35.0%
!!! CTAATGCGTGCTTGTTATTT+TGG + chr7_1:77687160-77687179 Msa1040330:three_prime_UTR 35.0%
AGTTGGAATGAAGTGGTAAT+GGG - chr7_1:77685622-77685641 None:intergenic 35.0%
TCGGTGACAAACAAATTAAC+CGG - chr7_1:77685721-77685740 None:intergenic 35.0%
! AAAAGCCATATCAAAGGTGT+TGG - chr7_1:77686113-77686132 None:intergenic 35.0%
! CGATCGATATACTTGTTTCT+TGG + chr7_1:77686355-77686374 Msa1040330:intron 35.0%
TGGTTGAATTATTGTGATGG+TGG + chr7_1:77686407-77686426 Msa1040330:intron 35.0%
TTAACAGCGATTCTAGTGAA+TGG + chr7_1:77686455-77686474 Msa1040330:intron 35.0%
! AACATTGGCTAAGGTTACTA+AGG - chr7_1:77686573-77686592 None:intergenic 35.0%
!! GATTTTCTGAACATTGGCTA+AGG - chr7_1:77686582-77686601 None:intergenic 35.0%
GAGATTGTGTTTGTTCTTGA+AGG + chr7_1:77686692-77686711 Msa1040330:CDS 35.0%
CTTGAAGGTCAATTAGATGT+TGG + chr7_1:77686707-77686726 Msa1040330:CDS 35.0%
TGGAAATGAACCAATCCTTT+AGG - chr7_1:77686797-77686816 None:intergenic 35.0%
GTTCATTTCCAAAAGAACAG+TGG + chr7_1:77686806-77686825 Msa1040330:CDS 35.0%
! GTACATAACCACTGTTCTTT+TGG - chr7_1:77686817-77686836 None:intergenic 35.0%
GGATTCAATAGTCAATTGCA+AGG + chr7_1:77686854-77686873 Msa1040330:CDS 35.0%
CAATAGTCAATTGCAAGGAA+CGG + chr7_1:77686859-77686878 Msa1040330:CDS 35.0%
GTAGAAGCAAACAAAGTAAG+AGG - chr7_1:77686893-77686912 None:intergenic 35.0%
TTGACTCAAGCATTCCAAAT+TGG + chr7_1:77686935-77686954 Msa1040330:CDS 35.0%
! CTTGATTTTCTGAACTTCCT+TGG - chr7_1:77686963-77686982 None:intergenic 35.0%
AATCCTTGATCTCACTACTT+GGG - chr7_1:77686998-77687017 None:intergenic 35.0%
CAAAATAACAAGCACGCATT+AGG - chr7_1:77687162-77687181 None:intergenic 35.0%
!!! CTAATGCGTGCTTGTTATTT+TGG + chr7_1:77687160-77687179 Msa1040330:three_prime_UTR 35.0%
GAGTTGGAATGAAGTGGTAA+TGG - chr7_1:77685623-77685642 None:intergenic 40.0%
ACAGAGGTCTTGAAGATTGT+CGG - chr7_1:77685814-77685833 None:intergenic 40.0%
GGCCTAATTAGAGAGTTAGT+TGG - chr7_1:77686088-77686107 None:intergenic 40.0%
!! GGAACCAAATGTGTTGTTTG+TGG - chr7_1:77686552-77686571 None:intergenic 40.0%
! TCCTGGGATTTTCTGAACAT+TGG - chr7_1:77686588-77686607 None:intergenic 40.0%
AGCATTCCAAATTGGTACCA+AGG + chr7_1:77686943-77686962 Msa1040330:CDS 40.0%
GAACTTCCTTGGTACCAATT+TGG - chr7_1:77686952-77686971 None:intergenic 40.0%
CAATCCTTGATCTCACTACT+TGG - chr7_1:77686999-77687018 None:intergenic 40.0%
GAGTTGGAATGAAGTGGTAA+TGG - chr7_1:77685623-77685642 None:intergenic 40.0%
ACAGAGGTCTTGAAGATTGT+CGG - chr7_1:77685814-77685833 None:intergenic 40.0%
GGCCTAATTAGAGAGTTAGT+TGG - chr7_1:77686088-77686107 None:intergenic 40.0%
!! GGAACCAAATGTGTTGTTTG+TGG - chr7_1:77686552-77686571 None:intergenic 40.0%
! TCCTGGGATTTTCTGAACAT+TGG - chr7_1:77686588-77686607 None:intergenic 40.0%
AGCATTCCAAATTGGTACCA+AGG + chr7_1:77686943-77686962 Msa1040330:CDS 40.0%
GAACTTCCTTGGTACCAATT+TGG - chr7_1:77686952-77686971 None:intergenic 40.0%
CAATCCTTGATCTCACTACT+TGG - chr7_1:77686999-77687018 None:intergenic 40.0%
TGGAAGAGAGACAGAAGACT+TGG - chr7_1:77685571-77685590 None:intergenic 45.0%
CTCTCTTCCAAGTCTTCTCT+TGG + chr7_1:77685581-77685600 Msa1040330:five_prime_UTR 45.0%
AAATGATGAAGCTCCTCGCA+GGG + chr7_1:77685748-77685767 Msa1040330:exon 45.0%
CAGAGGTCTTGAAGATTGTC+GGG - chr7_1:77685813-77685832 None:intergenic 45.0%
ATGTAACGGTACCAGAAGCA+AGG - chr7_1:77685845-77685864 None:intergenic 45.0%
GCCTACCAACACCTTTGATA+TGG + chr7_1:77686105-77686124 Msa1040330:intron 45.0%
!! GCCATATCAAAGGTGTTGGT+AGG - chr7_1:77686109-77686128 None:intergenic 45.0%
GAAATCAGCTGCGGTTACAT+TGG - chr7_1:77686501-77686520 None:intergenic 45.0%
!! AATGTGTTGTTTGTGGCTCC+TGG - chr7_1:77686545-77686564 None:intergenic 45.0%
GGAGCCACAAACAACACATT+TGG + chr7_1:77686545-77686564 Msa1040330:CDS 45.0%
GCCAATGTTCAGAAAATCCC+AGG + chr7_1:77686584-77686603 Msa1040330:CDS 45.0%
!! CAACACACTTGGTGTGTCAT+TGG + chr7_1:77686610-77686629 Msa1040330:CDS 45.0%
!! GCACGTATTGACTATGCTGT+AGG + chr7_1:77686632-77686651 Msa1040330:CDS 45.0%
!! CGTATTGACTATGCTGTAGG+TGG + chr7_1:77686635-77686654 Msa1040330:CDS 45.0%
ACACAATCTCAGTTGCACGT+GGG - chr7_1:77686682-77686701 None:intergenic 45.0%
AACACAATCTCAGTTGCACG+TGG - chr7_1:77686683-77686702 None:intergenic 45.0%
AATCCTGCAATTACTGCAGC+AGG - chr7_1:77686839-77686858 None:intergenic 45.0%
TGGAAGAGAGACAGAAGACT+TGG - chr7_1:77685571-77685590 None:intergenic 45.0%
CTCTCTTCCAAGTCTTCTCT+TGG + chr7_1:77685581-77685600 Msa1040330:five_prime_UTR 45.0%
AAATGATGAAGCTCCTCGCA+GGG + chr7_1:77685748-77685767 Msa1040330:exon 45.0%
CAGAGGTCTTGAAGATTGTC+GGG - chr7_1:77685813-77685832 None:intergenic 45.0%
ATGTAACGGTACCAGAAGCA+AGG - chr7_1:77685845-77685864 None:intergenic 45.0%
GCCTACCAACACCTTTGATA+TGG + chr7_1:77686105-77686124 Msa1040330:intron 45.0%
!! GCCATATCAAAGGTGTTGGT+AGG - chr7_1:77686109-77686128 None:intergenic 45.0%
GAAATCAGCTGCGGTTACAT+TGG - chr7_1:77686501-77686520 None:intergenic 45.0%
!! AATGTGTTGTTTGTGGCTCC+TGG - chr7_1:77686545-77686564 None:intergenic 45.0%
GGAGCCACAAACAACACATT+TGG + chr7_1:77686545-77686564 Msa1040330:CDS 45.0%
GCCAATGTTCAGAAAATCCC+AGG + chr7_1:77686584-77686603 Msa1040330:CDS 45.0%
!! CAACACACTTGGTGTGTCAT+TGG + chr7_1:77686610-77686629 Msa1040330:CDS 45.0%
!! GCACGTATTGACTATGCTGT+AGG + chr7_1:77686632-77686651 Msa1040330:CDS 45.0%
!! CGTATTGACTATGCTGTAGG+TGG + chr7_1:77686635-77686654 Msa1040330:CDS 45.0%
ACACAATCTCAGTTGCACGT+GGG - chr7_1:77686682-77686701 None:intergenic 45.0%
AACACAATCTCAGTTGCACG+TGG - chr7_1:77686683-77686702 None:intergenic 45.0%
AATCCTGCAATTACTGCAGC+AGG - chr7_1:77686839-77686858 None:intergenic 45.0%
!! ATTATTATTAATTAATGTAA+CGG - chr7_1:77685859-77685878 None:intergenic 5.0%
!! ATTATTATTAATTAATGTAA+CGG - chr7_1:77685859-77685878 None:intergenic 5.0%
CAAATGATGAAGCTCCTCGC+AGG + chr7_1:77685747-77685766 Msa1040330:exon 50.0%
AAGCAAGGTCTGCAACACAG+AGG - chr7_1:77685830-77685849 None:intergenic 50.0%
TGTGTTGCAGACCTTGCTTC+TGG + chr7_1:77685831-77685850 Msa1040330:CDS 50.0%
! GTTGGTGGAGAAATCAGCTG+CGG - chr7_1:77686510-77686529 None:intergenic 50.0%
! TGGTTTGGCTAGTACGTTGG+TGG - chr7_1:77686525-77686544 None:intergenic 50.0%
ACCAACGTACTAGCCAAACC+AGG + chr7_1:77686524-77686543 Msa1040330:CDS 50.0%
!! TCCTGGTTTGGCTAGTACGT+TGG - chr7_1:77686528-77686547 None:intergenic 50.0%
GTTGTTTGTGGCTCCTGGTT+TGG - chr7_1:77686540-77686559 None:intergenic 50.0%
ATCCCAGGACTCAACACACT+TGG + chr7_1:77686599-77686618 Msa1040330:CDS 50.0%
CACCAAGTGTGTTGAGTCCT+GGG - chr7_1:77686604-77686623 None:intergenic 50.0%
ACACCAAGTGTGTTGAGTCC+TGG - chr7_1:77686605-77686624 None:intergenic 50.0%
GTACCTGCTGCAGTAATTGC+AGG + chr7_1:77686833-77686852 Msa1040330:CDS 50.0%
GCACCCAAGTAGTGAGATCA+AGG + chr7_1:77686992-77687011 Msa1040330:exon 50.0%
CAAATGATGAAGCTCCTCGC+AGG + chr7_1:77685747-77685766 Msa1040330:exon 50.0%
AAGCAAGGTCTGCAACACAG+AGG - chr7_1:77685830-77685849 None:intergenic 50.0%
TGTGTTGCAGACCTTGCTTC+TGG + chr7_1:77685831-77685850 Msa1040330:CDS 50.0%
! GTTGGTGGAGAAATCAGCTG+CGG - chr7_1:77686510-77686529 None:intergenic 50.0%
! TGGTTTGGCTAGTACGTTGG+TGG - chr7_1:77686525-77686544 None:intergenic 50.0%
ACCAACGTACTAGCCAAACC+AGG + chr7_1:77686524-77686543 Msa1040330:CDS 50.0%
!! TCCTGGTTTGGCTAGTACGT+TGG - chr7_1:77686528-77686547 None:intergenic 50.0%
GTTGTTTGTGGCTCCTGGTT+TGG - chr7_1:77686540-77686559 None:intergenic 50.0%
ATCCCAGGACTCAACACACT+TGG + chr7_1:77686599-77686618 Msa1040330:CDS 50.0%
CACCAAGTGTGTTGAGTCCT+GGG - chr7_1:77686604-77686623 None:intergenic 50.0%
ACACCAAGTGTGTTGAGTCC+TGG - chr7_1:77686605-77686624 None:intergenic 50.0%
GTACCTGCTGCAGTAATTGC+AGG + chr7_1:77686833-77686852 Msa1040330:CDS 50.0%
GCACCCAAGTAGTGAGATCA+AGG + chr7_1:77686992-77687011 Msa1040330:exon 50.0%
GCTGCGGTTACATTGGAAGC+TGG - chr7_1:77686494-77686513 None:intergenic 55.0%
GCTGCGGTTACATTGGAAGC+TGG - chr7_1:77686494-77686513 None:intergenic 55.0%
CCAGAAGCAACAACCCTGCG+AGG - chr7_1:77685764-77685783 None:intergenic 60.0%
! CCTCGCAGGGTTGTTGCTTC+TGG + chr7_1:77685761-77685780 Msa1040330:CDS 60.0%
GGGATCAGCAGTGACAGAGG+TGG - chr7_1:77685793-77685812 None:intergenic 60.0%
GTCGGGATCAGCAGTGACAG+AGG - chr7_1:77685796-77685815 None:intergenic 60.0%
CACGTGGGTGAGTGTGTGGT+GGG - chr7_1:77686667-77686686 None:intergenic 60.0%
GTTGCACGTGGGTGAGTGTG+TGG - chr7_1:77686671-77686690 None:intergenic 60.0%
CCAGAAGCAACAACCCTGCG+AGG - chr7_1:77685764-77685783 None:intergenic 60.0%
! CCTCGCAGGGTTGTTGCTTC+TGG + chr7_1:77685761-77685780 Msa1040330:CDS 60.0%
GGGATCAGCAGTGACAGAGG+TGG - chr7_1:77685793-77685812 None:intergenic 60.0%
GTCGGGATCAGCAGTGACAG+AGG - chr7_1:77685796-77685815 None:intergenic 60.0%
CACGTGGGTGAGTGTGTGGT+GGG - chr7_1:77686667-77686686 None:intergenic 60.0%
GTTGCACGTGGGTGAGTGTG+TGG - chr7_1:77686671-77686690 None:intergenic 60.0%
GCACGTGGGTGAGTGTGTGG+TGG - chr7_1:77686668-77686687 None:intergenic 65.0%
GCACGTGGGTGAGTGTGTGG+TGG - chr7_1:77686668-77686687 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 77685503 77687369 77685503 ID=Msa1040330;Name=Msa1040330
chr7_1 mRNA 77685503 77687369 77685503 ID=Msa1040330-mRNA-1;Parent=Msa1040330;Name=Msa1040330-mRNA-1;_AED=0.04;_eAED=0.04;_QI=247|1|1|1|1|1|2|366|214
chr7_1 exon 77685503 77685852 77685503 ID=Msa1040330-mRNA-1:exon:20492;Parent=Msa1040330-mRNA-1
chr7_1 exon 77686462 77687369 77686462 ID=Msa1040330-mRNA-1:exon:20493;Parent=Msa1040330-mRNA-1
chr7_1 five_prime_UTR 77685503 77685749 77685503 ID=Msa1040330-mRNA-1:five_prime_utr;Parent=Msa1040330-mRNA-1
chr7_1 CDS 77685750 77685852 77685750 ID=Msa1040330-mRNA-1:cds;Parent=Msa1040330-mRNA-1
chr7_1 CDS 77686462 77687003 77686462 ID=Msa1040330-mRNA-1:cds;Parent=Msa1040330-mRNA-1
chr7_1 three_prime_UTR 77687004 77687369 77687004 ID=Msa1040330-mRNA-1:three_prime_utr;Parent=Msa1040330-mRNA-1
Gene Sequence

>Msa1040330

ATGATGAAGCTCCTCGCAGGGTTGTTGCTTCTGGTGTTAACCACCTCTGTCACTGCTGATCCCGACAATCTTCAAGACCTCTGTGTTGCAGACCTTGCTTCTGCGATTCTAGTGAATGGATTCACGTGCAAACCAGCTTCCAATGTAACCGCAGCTGATTTCTCCACCAACGTACTAGCCAAACCAGGAGCCACAAACAACACATTTGGTTCCTTAGTAACCTTAGCCAATGTTCAGAAAATCCCAGGACTCAACACACTTGGTGTGTCATTGGCACGTATTGACTATGCTGTAGGTGGACTGAACCCACCACACACTCACCCACGTGCAACTGAGATTGTGTTTGTTCTTGAAGGTCAATTAGATGTTGGGTTTATTACAACAAATAATGTTTTGATATCAAAGACTATTGTTAAGGGTGAAACATTTGTGTTTCCTAAAGGATTGGTTCATTTCCAAAAGAACAGTGGTTATGTACCTGCTGCAGTAATTGCAGGATTCAATAGTCAATTGCAAGGAACGGTGAATATTCCTCTTACTTTGTTTGCTTCTACACCACCTGTTCCAGATAATATTTTGACTCAAGCATTCCAAATTGGTACCAAGGAAGTTCAGAAAATCAAGTCTAGGCTTGCACCCAAGTAG

Protein sequence

>Msa1040330

MMKLLAGLLLLVLTTSVTADPDNLQDLCVADLASAILVNGFTCKPASNVTAADFSTNVLAKPGATNNTFGSLVTLANVQKIPGLNTLGVSLARIDYAVGGLNPPHTHPRATEIVFVLEGQLDVGFITTNNVLISKTIVKGETFVFPKGLVHFQKNSGYVPAAVIAGFNSQLQGTVNIPLTLFASTPPVPDNILTQAFQIGTKEVQKIKSRLAPK*