Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0273590 | XP_024633231.1 | 88.400 | 500 | 16 | 5 | 1 | 463 | 1 | 495 | 0.0 | 865 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0273590 | sp|P53980|YNB1_YEAST | 30.607 | 379 | 166 | 10 | 65 | 356 | 3 | 371 | 8.48e-43 | 160 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0273590 | G7ILI7 | 84.200 | 500 | 15 | 6 | 1 | 463 | 1 | 473 | 0.0 | 811 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0011920 | Msa0273590 | 0.831855 | 1.317509e-55 | -8.615850e-47 |
Msa0195810 | Msa0273590 | 0.803614 | 3.204820e-49 | -8.615850e-47 |
Msa0273590 | Msa0313910 | 0.895644 | 7.879531e-76 | -8.615850e-47 |
Msa0273590 | Msa0512640 | -0.824515 | 7.742431e-54 | -8.615850e-47 |
Msa0273590 | Msa0538050 | 0.806007 | 1.013750e-49 | -8.615850e-47 |
Msa0273590 | Msa0560280 | -0.807729 | 4.383915e-50 | -8.615850e-47 |
Msa0273590 | Msa0569980 | 0.804896 | 1.733162e-49 | -8.615850e-47 |
Msa0273590 | Msa0572730 | 0.801763 | 7.723971e-49 | -8.615850e-47 |
Msa0273590 | Msa0638810 | -0.801179 | 1.017387e-48 | -8.615850e-47 |
Msa0273590 | Msa0638820 | -0.817710 | 2.863907e-52 | -8.615850e-47 |
Msa0273590 | Msa0697520 | -0.803225 | 3.859594e-49 | -8.615850e-47 |
Msa0273590 | Msa1456180 | 0.813047 | 3.118229e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0273590 | MtrunA17_Chr2g0283681 | 84.200 | 500 | 15 | 6 | 1 | 463 | 1 | 473 | 0.0 | 811 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0273590 | AT2G34090.4 | 66.129 | 434 | 108 | 4 | 50 | 449 | 78 | 506 | 0.0 | 553 |
Msa0273590 | AT2G34090.2 | 65.977 | 435 | 109 | 4 | 49 | 449 | 42 | 471 | 0.0 | 552 |
Msa0273590 | AT2G34090.1 | 66.047 | 430 | 91 | 3 | 49 | 449 | 42 | 445 | 0.0 | 543 |
Msa0273590 | AT2G34090.3 | 65.438 | 434 | 90 | 5 | 50 | 449 | 78 | 485 | 0.0 | 533 |
Msa0273590 | AT2G34090.5 | 61.874 | 459 | 91 | 4 | 49 | 449 | 42 | 474 | 0.0 | 529 |
Find 148 sgRNAs with CRISPR-Local
Find 513 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTGACCTACCTTCTTAAT+AGG | 0.147956 | 2_3:+5169009 | None:intergenic |
CACATTGTTGGGCTCGAAAT+TGG | 0.148479 | 2_3:-5172189 | Msa0273590:CDS |
TTGTAGAAATTACCTGATTC+TGG | 0.183854 | 2_3:+5170500 | None:intergenic |
TTACATTAGGGTGTGAATTA+TGG | 0.211016 | 2_3:-5169278 | Msa0273590:CDS |
ATATTCGCTCGCAAATTTAA+TGG | 0.213228 | 2_3:+5172224 | None:intergenic |
GGATGAGGAGGGTGAGGGTT+AGG | 0.241596 | 2_3:+5172044 | None:intergenic |
ATTAAATTTGCGAGCGAATA+TGG | 0.253059 | 2_3:-5172222 | Msa0273590:exon |
TGTAGGTATTGCTGGGGATT+GGG | 0.262000 | 2_3:-5166672 | Msa0273590:intron |
AGGGGCAGATTGAAGTAAAA+AGG | 0.265514 | 2_3:+5167005 | None:intergenic |
ATGAAGGTACTTATGTTAAA+TGG | 0.284896 | 2_3:-5166257 | Msa0273590:intron |
TTCTGCTGATGTTGACTGTT+TGG | 0.299134 | 2_3:-5165735 | Msa0273590:CDS |
ACAGGGAGAACAAGGCTTTC+AGG | 0.309184 | 2_3:+5169321 | None:intergenic |
CATAGGATGGAACTATTATA+CGG | 0.309190 | 2_3:-5169074 | Msa0273590:intron |
TCATATATTATACCCACTTT+AGG | 0.309192 | 2_3:+5165224 | None:intergenic |
TCTGGTTTATTTCCAGAATC+AGG | 0.325171 | 2_3:-5170512 | Msa0273590:intron |
TACATTAGGGTGTGAATTAT+GGG | 0.328101 | 2_3:-5169277 | Msa0273590:intron |
TGAATATATCAATACTCTTC+TGG | 0.330988 | 2_3:-5165777 | Msa0273590:CDS |
TTGTAGGTATTGCTGGGGAT+TGG | 0.331571 | 2_3:-5166673 | Msa0273590:intron |
TCGAAATTGGGCCCCACCTT+CGG | 0.345500 | 2_3:-5172176 | Msa0273590:CDS |
GTTCTTCCCGTTTCCGATGA+TGG | 0.349103 | 2_3:-5171933 | Msa0273590:CDS |
TTTGGGAATTCTAGGTGAAT+TGG | 0.349830 | 2_3:-5164961 | Msa0273590:intron |
CAAACTGTTGTAGGTATTGC+TGG | 0.360787 | 2_3:-5166680 | Msa0273590:intron |
AGTAAACAATAAATGATAAT+AGG | 0.370735 | 2_3:+5164703 | None:intergenic |
GTAGGTATTGCTGGGGATTG+GGG | 0.379898 | 2_3:-5166671 | Msa0273590:intron |
TTTGCAGGATGAACACATTT+GGG | 0.389863 | 2_3:+5165681 | None:intergenic |
ACCAATGACAGACTTACATT+AGG | 0.390623 | 2_3:-5169291 | Msa0273590:CDS |
AGCTCGAATAGTCTCCCTAT+AGG | 0.399796 | 2_3:+5170537 | None:intergenic |
TTCTCACAAGATTCTGTAAA+CGG | 0.403759 | 2_3:+5166141 | None:intergenic |
GATGAGGAGGGTGAGGGTTA+GGG | 0.405303 | 2_3:+5172045 | None:intergenic |
ACATTGTTGGGCTCGAAATT+GGG | 0.408590 | 2_3:-5172188 | Msa0273590:CDS |
TACTTCAATCTGCCCCTCAT+TGG | 0.411133 | 2_3:-5166999 | Msa0273590:intron |
AGGCGTGTCAAAACCCTATA+GGG | 0.416128 | 2_3:-5170551 | Msa0273590:CDS |
CAGGGAGAACAAGGCTTTCA+GGG | 0.418828 | 2_3:+5169322 | None:intergenic |
CCAATGACAGACTTACATTA+GGG | 0.420960 | 2_3:-5169290 | Msa0273590:CDS |
GCTCGAATAGTCTCCCTATA+GGG | 0.424609 | 2_3:+5170538 | None:intergenic |
CTTGCGGTTCGAAATTTGCT+TGG | 0.425887 | 2_3:-5171544 | Msa0273590:CDS |
AATAGGTTCCATTGTTCCAC+TGG | 0.426176 | 2_3:+5169026 | None:intergenic |
GGCTGTGGATGAGGAGGGTG+AGG | 0.426957 | 2_3:+5172038 | None:intergenic |
CCGTTGGAGATATACGTTCT+AGG | 0.430013 | 2_3:-5171603 | Msa0273590:CDS |
ACTCATGACCGGGAGACTAA+TGG | 0.432876 | 2_3:-5166233 | Msa0273590:CDS |
CGATTGGGAGAAGATGGAAT+TGG | 0.433319 | 2_3:+5172092 | None:intergenic |
AAGGCGTGTCAAAACCCTAT+AGG | 0.441647 | 2_3:-5170552 | Msa0273590:CDS |
ATTTCCAACTTCCAAGAGAA+TGG | 0.443845 | 2_3:-5172123 | Msa0273590:CDS |
AGCCAGTCATTATTATCATC+TGG | 0.446578 | 2_3:+5165124 | None:intergenic |
GATGCTCTAAATCGAACATA+TGG | 0.447063 | 2_3:-5166176 | Msa0273590:CDS |
CTGTCATTGGTTGAAATCAC+AGG | 0.448280 | 2_3:+5169303 | None:intergenic |
CCCTAATGTAAGTCTGTCAT+TGG | 0.455349 | 2_3:+5169290 | None:intergenic |
GCCGTTGAAGGCGGTTCCAC+CGG | 0.456362 | 2_3:+5171998 | None:intergenic |
TGTTAAATGGCACTCATGAC+CGG | 0.462456 | 2_3:-5166244 | Msa0273590:CDS |
CAGCGACGGTGATTGCGATT+GGG | 0.463560 | 2_3:+5172077 | None:intergenic |
GATTTGTGTTACAGGTGGTC+CGG | 0.465340 | 2_3:-5171626 | Msa0273590:intron |
CAGACTGCAAATGTATGATT+TGG | 0.465848 | 2_3:+5165073 | None:intergenic |
GGTAGACATATCCACATTGT+TGG | 0.466506 | 2_3:-5172201 | Msa0273590:CDS |
AGTAGAGCAGGCTGTGGATG+AGG | 0.471214 | 2_3:+5172029 | None:intergenic |
GAAGCCATTCTCTTGGAAGT+TGG | 0.472628 | 2_3:+5172119 | None:intergenic |
TGGAAAGGAAGCCATTCTCT+TGG | 0.472650 | 2_3:+5172112 | None:intergenic |
TTGGGGAGATTATTTCTTCA+CGG | 0.473296 | 2_3:-5166654 | Msa0273590:CDS |
ACAGCGACGGTGATTGCGAT+TGG | 0.485516 | 2_3:+5172076 | None:intergenic |
GCTGAAATCGTTCGCGTCCT+CGG | 0.486430 | 2_3:-5171900 | Msa0273590:intron |
ACTTCATGTATCTCTCTACT+AGG | 0.490873 | 2_3:+5165171 | None:intergenic |
GGTTCCATTGTTCCACTGGT+TGG | 0.493564 | 2_3:+5169030 | None:intergenic |
ATACCACATCAAATATTCCT+TGG | 0.495851 | 2_3:+5165708 | None:intergenic |
CTACCACCATCATCGGAAAC+GGG | 0.496297 | 2_3:+5171927 | None:intergenic |
GCTACCACCATCATCGGAAA+CGG | 0.496469 | 2_3:+5171926 | None:intergenic |
CTCCCTACTTGATCCTAAAG+TGG | 0.497761 | 2_3:-5165237 | Msa0273590:CDS |
GTTACAGGTGGTCCGGCCGT+TGG | 0.498393 | 2_3:-5171619 | Msa0273590:intron |
GTAGACATATCCACATTGTT+GGG | 0.507147 | 2_3:-5172200 | Msa0273590:CDS |
ATCTTCGACGACGCCGTTGA+AGG | 0.509067 | 2_3:+5171986 | None:intergenic |
TTCTTCACGGTCCTGCCTCA+AGG | 0.513722 | 2_3:-5166641 | Msa0273590:intron |
TACCACATCAAATATTCCTT+GGG | 0.517760 | 2_3:+5165709 | None:intergenic |
TGACTCTGCATTTCGATGGT+AGG | 0.519487 | 2_3:+5164927 | None:intergenic |
TGTGAGAGTCTTACCAATGA+GGG | 0.523028 | 2_3:+5166986 | None:intergenic |
TGATTGCGATTGGGAGAAGA+TGG | 0.523037 | 2_3:+5172086 | None:intergenic |
AATGTAGATTGCATTGTGTA+TGG | 0.527499 | 2_3:-5167037 | Msa0273590:CDS |
AAGAAGATTGTAACCGAAGG+TGG | 0.528580 | 2_3:+5172163 | None:intergenic |
GACTCTGCATTTCGATGGTA+GGG | 0.529020 | 2_3:+5164928 | None:intergenic |
CTGAAAATCCATTAGTCTCC+CGG | 0.531806 | 2_3:+5166225 | None:intergenic |
TATATATCTAACTATTGATG+TGG | 0.531843 | 2_3:-5164758 | Msa0273590:three_prime_UTR |
AGCGGTGCTACCACCATCAT+CGG | 0.535940 | 2_3:+5171920 | None:intergenic |
CTTTGAATAGGTCTTTCCCT+CGG | 0.536834 | 2_3:-5167089 | Msa0273590:intron |
AACAATGGAACCTATTAAGA+AGG | 0.537444 | 2_3:-5169019 | Msa0273590:intron |
GTCTGTCATCACAGTATACA+TGG | 0.538249 | 2_3:-5165055 | Msa0273590:intron |
TTGAAATCACAGGGAGAACA+AGG | 0.538951 | 2_3:+5169313 | None:intergenic |
CATTCTGATTTAGCTTGCAA+AGG | 0.541939 | 2_3:+5171502 | None:intergenic |
TCCGGTGGAACCGCCTTCAA+CGG | 0.543747 | 2_3:-5171999 | Msa0273590:CDS |
CCGGAGAAGACAAGTAGAGC+AGG | 0.546545 | 2_3:+5172017 | None:intergenic |
CGAAATGCAGAGTCAGAGAC+TGG | 0.548702 | 2_3:-5164919 | Msa0273590:three_prime_UTR |
CCTGCTCTACTTGTCTTCTC+CGG | 0.555167 | 2_3:-5172017 | Msa0273590:CDS |
CATGTTTAGGTACTCTATTG+TGG | 0.556265 | 2_3:-5170596 | Msa0273590:intron |
GATTGCATTGTGTATGGCAT+GGG | 0.556407 | 2_3:-5167031 | Msa0273590:CDS |
AGAGCAGGCTGTGGATGAGG+AGG | 0.557573 | 2_3:+5172032 | None:intergenic |
ATTGATGTGGGTTATTATCA+CGG | 0.558728 | 2_3:-5164745 | Msa0273590:three_prime_UTR |
ATAGGATGGAACTATTATAC+GGG | 0.562219 | 2_3:-5169073 | Msa0273590:intron |
AAGACAAGTAGAGCAGGCTG+TGG | 0.564850 | 2_3:+5172023 | None:intergenic |
GACGAGGAATACCTTGAGGC+AGG | 0.564869 | 2_3:+5166630 | None:intergenic |
ACCCACTTTAGGATCAAGTA+GGG | 0.570352 | 2_3:+5165235 | None:intergenic |
GCTCTACTTGTCTTCTCCGG+TGG | 0.574805 | 2_3:-5172014 | Msa0273590:CDS |
TTCGACGACGCCGTTGAAGG+CGG | 0.575100 | 2_3:+5171989 | None:intergenic |
TTTAGGTACTCTATTGTGGA+AGG | 0.575891 | 2_3:-5170592 | Msa0273590:intron |
GTTAAATGGCACTCATGACC+GGG | 0.576747 | 2_3:-5166243 | Msa0273590:CDS |
TACCCACTTTAGGATCAAGT+AGG | 0.576994 | 2_3:+5165234 | None:intergenic |
GGTCTTTCCCTCGGCTAATG+CGG | 0.579139 | 2_3:-5167080 | Msa0273590:CDS |
AGAGAGATACATGAAGTCGC+AGG | 0.582229 | 2_3:-5165165 | Msa0273590:CDS |
GGGAGAAGATGGAATTGGAA+AGG | 0.583833 | 2_3:+5172097 | None:intergenic |
GTTGACTGTTTGGCTTCCCA+AGG | 0.585008 | 2_3:-5165725 | Msa0273590:CDS |
AAACTGTTGTAGGTATTGCT+GGG | 0.585918 | 2_3:-5166679 | Msa0273590:intron |
CTTTGCAAGCTAAATCAGAA+TGG | 0.586021 | 2_3:-5171501 | Msa0273590:intron |
TACCAGATGATAATAATGAC+TGG | 0.586067 | 2_3:-5165126 | Msa0273590:exon |
AGAAGATTGTAACCGAAGGT+GGG | 0.591377 | 2_3:+5172164 | None:intergenic |
ACATCCAACCAGTGGAACAA+TGG | 0.594681 | 2_3:-5169034 | Msa0273590:CDS |
ATATATCTAACTATTGATGT+GGG | 0.599081 | 2_3:-5164757 | Msa0273590:three_prime_UTR |
GAAGATTGTAACCGAAGGTG+GGG | 0.600944 | 2_3:+5172165 | None:intergenic |
GTTGGAAATGTGATTGTGAA+AGG | 0.603636 | 2_3:+5172137 | None:intergenic |
TTAGCTTGCAAAGGATCAAG+TGG | 0.604851 | 2_3:+5171511 | None:intergenic |
ATATACGTTCTAGGTGTCTG+AGG | 0.605337 | 2_3:-5171594 | Msa0273590:CDS |
AGATTCTGTAAACGGTTGCA+AGG | 0.606097 | 2_3:+5166149 | None:intergenic |
AGAGCTCTAATCAGTGACTT+CGG | 0.609256 | 2_3:+5165200 | None:intergenic |
TTGTGAGAGTCTTACCAATG+AGG | 0.611396 | 2_3:+5166985 | None:intergenic |
TAATACAGCCGCATTAGCCG+AGG | 0.611504 | 2_3:+5167072 | None:intergenic |
TCCCTACTTGATCCTAAAGT+GGG | 0.613938 | 2_3:-5165236 | Msa0273590:CDS |
AGGGAGAACAAGGCTTTCAG+GGG | 0.614545 | 2_3:+5169323 | None:intergenic |
AAGTACAGCAGAAGCTCTTG+CGG | 0.617508 | 2_3:-5171560 | Msa0273590:CDS |
AATCTCTGATGTTTACAGCA+TGG | 0.619287 | 2_3:-5165645 | Msa0273590:intron |
GAGCAGGCTGTGGATGAGGA+GGG | 0.621918 | 2_3:+5172033 | None:intergenic |
TCTCTGACTCTGCATTTCGA+TGG | 0.623393 | 2_3:+5164923 | None:intergenic |
GCTGTGGATGAGGAGGGTGA+GGG | 0.630451 | 2_3:+5172039 | None:intergenic |
TTCCCAAGGAATATTTGATG+TGG | 0.630793 | 2_3:-5165711 | Msa0273590:CDS |
AGATTGCATTGTGTATGGCA+TGG | 0.631842 | 2_3:-5167032 | Msa0273590:CDS |
CTTCCCGTTTCCGATGATGG+TGG | 0.632798 | 2_3:-5171930 | Msa0273590:CDS |
GAACGTATATCTCCAACGGC+CGG | 0.633192 | 2_3:+5171607 | None:intergenic |
GAAATTTCACATCCAACCAG+TGG | 0.643273 | 2_3:-5169042 | Msa0273590:CDS |
AACTGTTGTAGGTATTGCTG+GGG | 0.648126 | 2_3:-5166678 | Msa0273590:intron |
CAATTTCGAGCCCAACAATG+TGG | 0.650269 | 2_3:+5172190 | None:intergenic |
AAGAACATGAGCGACACGAG+TGG | 0.651447 | 2_3:+5171950 | None:intergenic |
GTGTTCTACATGTCAAGCGA+GGG | 0.652075 | 2_3:-5168219 | Msa0273590:CDS |
TAGAAGAAGATTGTAACCGA+AGG | 0.657731 | 2_3:+5172160 | None:intergenic |
TGTCATTGGTTGAAATCACA+GGG | 0.660283 | 2_3:+5169304 | None:intergenic |
AATACAGCCGCATTAGCCGA+GGG | 0.660371 | 2_3:+5167073 | None:intergenic |
GGTGTTCTACATGTCAAGCG+AGG | 0.663848 | 2_3:-5168220 | Msa0273590:CDS |
AGAGTATTGATATATTCACT+AGG | 0.673196 | 2_3:+5165782 | None:intergenic |
TGATTTGGCAGTCAGTAGTG+AGG | 0.673728 | 2_3:+5165088 | None:intergenic |
GGGAGAACAAGGCTTTCAGG+GGG | 0.675449 | 2_3:+5169324 | None:intergenic |
GTGAGAGTCTTACCAATGAG+GGG | 0.677466 | 2_3:+5166987 | None:intergenic |
CCTAGAACGTATATCTCCAA+CGG | 0.677924 | 2_3:+5171603 | None:intergenic |
GGGAAAGAATTTGCTCCATG+AGG | 0.683200 | 2_3:-5168199 | Msa0273590:intron |
TAGGGTTAGAGTAACAGCGA+CGG | 0.723096 | 2_3:+5172063 | None:intergenic |
GAGGACGCGAACGATTTCAG+CGG | 0.737987 | 2_3:+5171902 | None:intergenic |
TAGGATGGAACTATTATACG+GGG | 0.762944 | 2_3:-5169072 | Msa0273590:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTAATACTACATAAATAA+AGG | + | chr2_3:5166211-5166230 | None:intergenic | 10.0% |
!! | TAAATTAAAATGAATACAAA+AGG | + | chr2_3:5166268-5166287 | None:intergenic | 10.0% |
!!! | TATATGTTTTTAAGATAATT+TGG | - | chr2_3:5166682-5166701 | Msa0273590:intron | 10.0% |
!! | TAATTTGAATAAAAGATAAA+AGG | - | chr2_3:5166926-5166945 | Msa0273590:intron | 10.0% |
!!! | AAGTTATTTTATACTATATT+AGG | + | chr2_3:5167212-5167231 | None:intergenic | 10.0% |
!! | TTTATCTATTATGAAAATAT+TGG | - | chr2_3:5169128-5169147 | Msa0273590:intron | 10.0% |
!! | TTATGTAGTATTAATAAGTT+TGG | - | chr2_3:5166215-5166234 | Msa0273590:CDS | 15.0% |
!!! | ATATTTTAATAATTTGCTTC+TGG | - | chr2_3:5166564-5166583 | Msa0273590:intron | 15.0% |
!!! | TATTTTAATAATTTGCTTCT+GGG | - | chr2_3:5166565-5166584 | Msa0273590:intron | 15.0% |
!! | ATTTGAAAATATTAAACGTT+GGG | - | chr2_3:5168327-5168346 | Msa0273590:intron | 15.0% |
!!! | ATCTTCTATTTTATAAACTT+AGG | - | chr2_3:5168405-5168424 | Msa0273590:intron | 15.0% |
!!! | AATTTTATACTTTCATTGTT+AGG | - | chr2_3:5168632-5168651 | Msa0273590:intron | 15.0% |
!!! | TTTGTTGTAAATGTAAATTT+TGG | - | chr2_3:5168899-5168918 | Msa0273590:intron | 15.0% |
!! | ACGAAATATAAATTTGAATT+TGG | - | chr2_3:5169182-5169201 | Msa0273590:intron | 15.0% |
!! | ATATATATATATAGCAGTTT+CGG | + | chr2_3:5169283-5169302 | None:intergenic | 15.0% |
!! | ATAGAAAATGAAAACAAAAA+AGG | - | chr2_3:5171052-5171071 | Msa0273590:intron | 15.0% |
!! | CAACACATTATAAAAAAATT+TGG | - | chr2_3:5171440-5171459 | Msa0273590:intron | 15.0% |
!!! | TTTTTATGTTAACCATAATT+TGG | - | chr2_3:5171936-5171955 | Msa0273590:CDS | 15.0% |
!!! | TTTTATGTTAACCATAATTT+GGG | - | chr2_3:5171937-5171956 | Msa0273590:CDS | 15.0% |
!! | AGTAAACAATAAATGATAAT+AGG | + | chr2_3:5172215-5172234 | None:intergenic | 15.0% |
!! | CTTTATTGCATATATAGTTA+TGG | - | chr2_3:5165554-5165573 | Msa0273590:intron | 20.0% |
!! | ATATGAAAACAATATGAAAC+CGG | + | chr2_3:5165633-5165652 | None:intergenic | 20.0% |
!! | TAAACTCAATTATTCAAACA+AGG | + | chr2_3:5165814-5165833 | None:intergenic | 20.0% |
!! | ATAATTGAGTTTAAGAATCA+TGG | - | chr2_3:5165821-5165840 | Msa0273590:intron | 20.0% |
!! | TCATTTCATATTTATAAGCT+AGG | + | chr2_3:5165953-5165972 | None:intergenic | 20.0% |
!!! | TATTTTTCAATAAGATAACG+AGG | - | chr2_3:5166007-5166026 | Msa0273590:intron | 20.0% |
!! | TAATTCTTGTAATCATGTTT+AGG | - | chr2_3:5166306-5166325 | Msa0273590:intron | 20.0% |
!!! | CATATATTTTGCAACTTTTT+AGG | + | chr2_3:5166668-5166687 | None:intergenic | 20.0% |
!! | ATTACTAATGCTAAGTTATA+TGG | + | chr2_3:5166910-5166929 | None:intergenic | 20.0% |
!!! | TTTTATTTCAACTGACTTTA+CGG | - | chr2_3:5167435-5167454 | Msa0273590:intron | 20.0% |
!!! | TATAAACAAGCTTTATCTAA+TGG | + | chr2_3:5168010-5168029 | None:intergenic | 20.0% |
!!! | AGATTCTTATTTGAAGAAAA+TGG | - | chr2_3:5168204-5168223 | Msa0273590:CDS | 20.0% |
!!! | GATTCTTATTTGAAGAAAAT+GGG | - | chr2_3:5168205-5168224 | Msa0273590:CDS | 20.0% |
!!! | ATTCTTATTTGAAGAAAATG+GGG | - | chr2_3:5168206-5168225 | Msa0273590:CDS | 20.0% |
!! | CATTTGAAAATATTAAACGT+TGG | - | chr2_3:5168326-5168345 | Msa0273590:intron | 20.0% |
!! | AAAATAGAAGATGAAATCAA+AGG | + | chr2_3:5168397-5168416 | None:intergenic | 20.0% |
!!! | TCTATTTTATAAACTTAGGT+AGG | - | chr2_3:5168409-5168428 | Msa0273590:intron | 20.0% |
!!! | CTATTTTATAAACTTAGGTA+GGG | - | chr2_3:5168410-5168429 | Msa0273590:intron | 20.0% |
!!! | TATTTTATAAACTTAGGTAG+GGG | - | chr2_3:5168411-5168430 | Msa0273590:intron | 20.0% |
!! | TAACAAAATATGAAACAAGT+AGG | + | chr2_3:5168762-5168781 | None:intergenic | 20.0% |
!!! | CTTGTTTCATATTTTGTTAA+AGG | - | chr2_3:5168763-5168782 | Msa0273590:intron | 20.0% |
!!! | ATATTTTGTTAAAGGACTTT+TGG | - | chr2_3:5168771-5168790 | Msa0273590:intron | 20.0% |
!!! | TGTAAATTTTGGAAAAAGAA+AGG | - | chr2_3:5168910-5168929 | Msa0273590:intron | 20.0% |
!!! | TTAATTAAGTTGTTGTAGAA+GGG | + | chr2_3:5168974-5168993 | None:intergenic | 20.0% |
!!! | ATTAATTAAGTTGTTGTAGA+AGG | + | chr2_3:5168975-5168994 | None:intergenic | 20.0% |
!!! | TCCTATATTTTTTACATTAG+CGG | + | chr2_3:5169258-5169277 | None:intergenic | 20.0% |
!! | GATAGAAGATGAATAAATAA+AGG | + | chr2_3:5169437-5169456 | None:intergenic | 20.0% |
!! | AGATTAATATGTAACTTTGT+TGG | - | chr2_3:5170147-5170166 | Msa0273590:intron | 20.0% |
!!! | TTATATTGATTGAGTAATGT+TGG | - | chr2_3:5170552-5170571 | Msa0273590:CDS | 20.0% |
!!! | TATATTGATTGAGTAATGTT+GGG | - | chr2_3:5170553-5170572 | Msa0273590:CDS | 20.0% |
!!! | TTTGAAGTTATCTACTTTTT+AGG | - | chr2_3:5170598-5170617 | Msa0273590:intron | 20.0% |
!! | ATTTGATTGACAAAAAATGA+AGG | - | chr2_3:5170642-5170661 | Msa0273590:intron | 20.0% |
!!! | TTGGTGTCAATATTATTATT+GGG | - | chr2_3:5170817-5170836 | Msa0273590:intron | 20.0% |
!!! | GGATCTTTATATTCTTATTT+TGG | - | chr2_3:5171590-5171609 | Msa0273590:CDS | 20.0% |
!! | TATATATCTAACTATTGATG+TGG | - | chr2_3:5172157-5172176 | Msa0273590:CDS | 20.0% |
!! | ATATATCTAACTATTGATGT+GGG | - | chr2_3:5172158-5172177 | Msa0273590:CDS | 20.0% |
!! | TGTTTCTACATTGAAGATTT+GGG | - | chr2_3:5165081-5165100 | Msa0273590:three_prime_UTR | 25.0% |
! | TTCTCAAATTACTACTATGT+TGG | - | chr2_3:5165211-5165230 | Msa0273590:CDS | 25.0% |
!! | TTAAGTTGTTTGTTGAAACA+CGG | + | chr2_3:5165527-5165546 | None:intergenic | 25.0% |
! | AGAGACAAAATGAATTAAAC+CGG | - | chr2_3:5165611-5165630 | Msa0273590:intron | 25.0% |
!! | ATTGTTTTCATATGCTATTC+AGG | - | chr2_3:5165640-5165659 | Msa0273590:intron | 25.0% |
!!! | CTTGATTAGCTTATCAAAAA+AGG | - | chr2_3:5166066-5166085 | Msa0273590:intron | 25.0% |
! | ATGACTAAAAAAGACTCATT+TGG | + | chr2_3:5166120-5166139 | None:intergenic | 25.0% |
!! | ATATGTTGTAAAGGTATGTT+TGG | + | chr2_3:5166173-5166192 | None:intergenic | 25.0% |
! | AGCATAAGAATATGTTGTAA+AGG | + | chr2_3:5166182-5166201 | None:intergenic | 25.0% |
! | TAGTATTAATAAGTTTGGTC+AGG | - | chr2_3:5166220-5166239 | Msa0273590:CDS | 25.0% |
!! | CATATCACATCTTATCTTTT+AGG | - | chr2_3:5166614-5166633 | Msa0273590:intron | 25.0% |
!!! | ACATCTTATCTTTTAGGAAT+GGG | - | chr2_3:5166620-5166639 | Msa0273590:intron | 25.0% |
!!! | GATAATTTGGCATTTGTTTT+TGG | - | chr2_3:5166695-5166714 | Msa0273590:intron | 25.0% |
! | TCTTGCTGAATAAAAAAAAG+AGG | + | chr2_3:5166778-5166797 | None:intergenic | 25.0% |
!! | ATCAATAAAAGCAAGCTTTT+GGG | + | chr2_3:5166843-5166862 | None:intergenic | 25.0% |
!! | AATCAATAAAAGCAAGCTTT+TGG | + | chr2_3:5166844-5166863 | None:intergenic | 25.0% |
! | GAATAAAAGATAAAAGGAGA+CGG | - | chr2_3:5166932-5166951 | Msa0273590:intron | 25.0% |
! | AATAAAAGATAAAAGGAGAC+GGG | - | chr2_3:5166933-5166952 | Msa0273590:intron | 25.0% |
! | AGGTGTCAATTAAGTATTAA+TGG | + | chr2_3:5167192-5167211 | None:intergenic | 25.0% |
! | ATGAAAAGTAAGTAACAGTT+AGG | - | chr2_3:5167233-5167252 | Msa0273590:intron | 25.0% |
! | CAGCAATCATTTATATTCTT+TGG | + | chr2_3:5167283-5167302 | None:intergenic | 25.0% |
! | CAAAGAATATAAATGATTGC+TGG | - | chr2_3:5167281-5167300 | Msa0273590:intron | 25.0% |
!! | TTTTATAAACTATGCAGCAT+TGG | - | chr2_3:5167486-5167505 | Msa0273590:intron | 25.0% |
!!! | ATTGGAAATTTCTTTTTTGC+AGG | - | chr2_3:5167504-5167523 | Msa0273590:intron | 25.0% |
! | TTAACTGTGGAATTATCTTA+TGG | - | chr2_3:5167675-5167694 | Msa0273590:intron | 25.0% |
!!! | CTATATCAGGTTTTTTTAAC+AGG | + | chr2_3:5167746-5167765 | None:intergenic | 25.0% |
! | TCTTTGTGAATTTCTATATC+AGG | + | chr2_3:5167759-5167778 | None:intergenic | 25.0% |
! | TTATTATCCAATATCTGCAT+AGG | - | chr2_3:5167824-5167843 | Msa0273590:intron | 25.0% |
! | AAACAAATTACTGTATGAGT+AGG | + | chr2_3:5167959-5167978 | None:intergenic | 25.0% |
!! | ATTTTATAAACTTAGGTAGG+GGG | - | chr2_3:5168412-5168431 | Msa0273590:intron | 25.0% |
!! | TCATTGTTAGGAAAGTTTTT+CGG | - | chr2_3:5168644-5168663 | Msa0273590:intron | 25.0% |
! | CTCTTCCTTCAAAAATAAAA+CGG | - | chr2_3:5168673-5168692 | Msa0273590:intron | 25.0% |
! | TCTTCCTTCAAAAATAAAAC+GGG | - | chr2_3:5168674-5168693 | Msa0273590:intron | 25.0% |
!!! | GAAGAGATAAATGGATTATA+TGG | - | chr2_3:5168842-5168861 | Msa0273590:intron | 25.0% |
!!! | AAATTTTGGAAAAAGAAAGG+AGG | - | chr2_3:5168913-5168932 | Msa0273590:intron | 25.0% |
!!! | AATTTTGGAAAAAGAAAGGA+GGG | - | chr2_3:5168914-5168933 | Msa0273590:intron | 25.0% |
! | ACCGCTAATGTAAAAAATAT+AGG | - | chr2_3:5169254-5169273 | Msa0273590:intron | 25.0% |
! | ACTTGAGCAATTTATTTCAT+TGG | - | chr2_3:5169377-5169396 | Msa0273590:intron | 25.0% |
!! | TCTTTTTCTCTTCTTTGAAT+AGG | - | chr2_3:5169814-5169833 | Msa0273590:intron | 25.0% |
! | CAATACATTCACAATATTCA+AGG | + | chr2_3:5170057-5170076 | None:intergenic | 25.0% |
! | CTTAACATGTTGGAAAATAA+AGG | + | chr2_3:5170412-5170431 | None:intergenic | 25.0% |
!!! | ATGAAGGTACTTATGTTAAA+TGG | - | chr2_3:5170658-5170677 | Msa0273590:intron | 25.0% |
!!! | TTGTTTTGTAACTGCTATTA+CGG | - | chr2_3:5170717-5170736 | Msa0273590:intron | 25.0% |
!!! | CTTGGTGTCAATATTATTAT+TGG | - | chr2_3:5170816-5170835 | Msa0273590:intron | 25.0% |
! | AACATTACGTTAAGTTTCTA+AGG | + | chr2_3:5170846-5170865 | None:intergenic | 25.0% |
! | AAACTTAACGTAATGTTGAA+AGG | - | chr2_3:5170849-5170868 | Msa0273590:intron | 25.0% |
! | AAAGAAGAATAACATTGAGA+TGG | + | chr2_3:5170983-5171002 | None:intergenic | 25.0% |
!!! | AGAGTATTGATATATTCACT+AGG | + | chr2_3:5171136-5171155 | None:intergenic | 25.0% |
! | TGAATATATCAATACTCTTC+TGG | - | chr2_3:5171138-5171157 | Msa0273590:intron | 25.0% |
!!! | GCAGAAATTTTACTATTTCT+TGG | + | chr2_3:5171166-5171185 | None:intergenic | 25.0% |
!! | TCTAAAGTCAGACTTTAAAT+TGG | - | chr2_3:5171502-5171521 | Msa0273590:CDS | 25.0% |
! | TGTTCATGTCATATGTTTAT+AGG | - | chr2_3:5171526-5171545 | Msa0273590:CDS | 25.0% |
! | TCATATATTATACCCACTTT+AGG | + | chr2_3:5171694-5171713 | None:intergenic | 25.0% |
ATATTCGCTCGCAAATTTAA+TGG | + | chr2_3:5164694-5164713 | None:intergenic | 30.0% | |
ATTAAATTTGCGAGCGAATA+TGG | - | chr2_3:5164693-5164712 | Msa0273590:three_prime_UTR | 30.0% | |
! | GTGTTTCTACATTGAAGATT+TGG | - | chr2_3:5165080-5165099 | Msa0273590:three_prime_UTR | 30.0% |
GTTTCTACATTGAAGATTTG+GGG | - | chr2_3:5165082-5165101 | Msa0273590:three_prime_UTR | 30.0% | |
TTCAACTTAATCACATGTGT+CGG | + | chr2_3:5165181-5165200 | None:intergenic | 30.0% | |
!! | TGGCAGTCATATGTTTTATT+AGG | - | chr2_3:5165257-5165276 | Msa0273590:intron | 30.0% |
!! | GGCAGTCATATGTTTTATTA+GGG | - | chr2_3:5165258-5165277 | Msa0273590:intron | 30.0% |
!! | CATATGTTTTATTAGGGATG+TGG | - | chr2_3:5165264-5165283 | Msa0273590:intron | 30.0% |
GAAGCAAAAGAGTTCAAATA+TGG | + | chr2_3:5165442-5165461 | None:intergenic | 30.0% | |
! | TTTTGCTTCTCTTTCAGTTA+TGG | - | chr2_3:5165453-5165472 | Msa0273590:intron | 30.0% |
TCTCTTTCAGTTATGGAATA+TGG | - | chr2_3:5165460-5165479 | Msa0273590:intron | 30.0% | |
TAAATACTTGTGAGACTGTT+TGG | + | chr2_3:5165725-5165744 | None:intergenic | 30.0% | |
TCCAGTAAGACAATTAAAGT+AGG | - | chr2_3:5165761-5165780 | Msa0273590:CDS | 30.0% | |
!!! | TTTTAGAATTAGGCTCTGTT+TGG | - | chr2_3:5165859-5165878 | Msa0273590:intron | 30.0% |
ACTTTACCAAACACTACTAT+AGG | + | chr2_3:5165914-5165933 | None:intergenic | 30.0% | |
GTAAAGTTAACTGTTGAACT+AGG | - | chr2_3:5165927-5165946 | Msa0273590:intron | 30.0% | |
ATAAGCTCGTAAGAAAATGA+AGG | - | chr2_3:5166091-5166110 | Msa0273590:intron | 30.0% | |
TTGTAGAAATTACCTGATTC+TGG | + | chr2_3:5166418-5166437 | None:intergenic | 30.0% | |
!! | CACATCTTATCTTTTAGGAA+TGG | - | chr2_3:5166619-5166638 | Msa0273590:intron | 30.0% |
! | TCAATAAAAGCAAGCTTTTG+GGG | + | chr2_3:5166842-5166861 | None:intergenic | 30.0% |
GACTGTAAAGATTAGGTATT+AGG | + | chr2_3:5166966-5166985 | None:intergenic | 30.0% | |
CATTGTAGACTGTAAAGATT+AGG | + | chr2_3:5166973-5166992 | None:intergenic | 30.0% | |
CTAATCTTTACAGTCTACAA+TGG | - | chr2_3:5166971-5166990 | Msa0273590:intron | 30.0% | |
!! | TATTTAATCAGGTGTTGTTG+TGG | + | chr2_3:5167001-5167020 | None:intergenic | 30.0% |
TATTACTGTATAGGAAGTCA+GGG | + | chr2_3:5167024-5167043 | None:intergenic | 30.0% | |
CATTTGACCTATTACTGTAT+AGG | + | chr2_3:5167033-5167052 | None:intergenic | 30.0% | |
AAAGTAAGTAACAGTTAGGA+TGG | - | chr2_3:5167237-5167256 | Msa0273590:intron | 30.0% | |
AAGTAAGTAACAGTTAGGAT+GGG | - | chr2_3:5167238-5167257 | Msa0273590:intron | 30.0% | |
! | ATGCAACTTCTGTTTTACTT+TGG | - | chr2_3:5167368-5167387 | Msa0273590:intron | 30.0% |
TTATATGTATAGAACCAGCT+TGG | + | chr2_3:5167410-5167429 | None:intergenic | 30.0% | |
TTACATTAGGGTGTGAATTA+TGG | - | chr2_3:5167637-5167656 | Msa0273590:intron | 30.0% | |
TACATTAGGGTGTGAATTAT+GGG | - | chr2_3:5167638-5167657 | Msa0273590:intron | 30.0% | |
ACGATACATCTATTTAACTG+TGG | - | chr2_3:5167662-5167681 | Msa0273590:intron | 30.0% | |
AGAAGTAAATGCTACTCTTA+GGG | - | chr2_3:5167705-5167724 | Msa0273590:intron | 30.0% | |
TACTCTTAGGGAAAGTTTAT+AGG | - | chr2_3:5167717-5167736 | Msa0273590:intron | 30.0% | |
CATAGGATGGAACTATTATA+CGG | - | chr2_3:5167841-5167860 | Msa0273590:intron | 30.0% | |
ATAGGATGGAACTATTATAC+GGG | - | chr2_3:5167842-5167861 | Msa0273590:intron | 30.0% | |
AACAATGGAACCTATTAAGA+AGG | - | chr2_3:5167896-5167915 | Msa0273590:intron | 30.0% | |
TTTATCGAATCTCTATGACA+TGG | + | chr2_3:5168103-5168122 | None:intergenic | 30.0% | |
! | GATTCGATAAAGTTTTACGT+TGG | - | chr2_3:5168112-5168131 | Msa0273590:intron | 30.0% |
TATTTGAAGAAAATGGGGAA+TGG | - | chr2_3:5168211-5168230 | Msa0273590:CDS | 30.0% | |
ATCAATACCCATCATTGTAA+GGG | + | chr2_3:5168442-5168461 | None:intergenic | 30.0% | |
AATCAATACCCATCATTGTA+AGG | + | chr2_3:5168443-5168462 | None:intergenic | 30.0% | |
!!! | TTTATTTTTGAAGGAAGAGC+TGG | + | chr2_3:5168672-5168691 | None:intergenic | 30.0% |
!!! | AACACCCGTTTTATTTTTGA+AGG | + | chr2_3:5168681-5168700 | None:intergenic | 30.0% |
!! | ACTTTTGGCATATTTGACTT+TGG | - | chr2_3:5168786-5168805 | Msa0273590:intron | 30.0% |
AATGCGTTGCAATCAATAAT+AGG | - | chr2_3:5168817-5168836 | Msa0273590:intron | 30.0% | |
TAATAGGCAGAAGAGATAAA+TGG | - | chr2_3:5168833-5168852 | Msa0273590:intron | 30.0% | |
AGGGAAAGATTTCTAATGAT+TGG | - | chr2_3:5168933-5168952 | Msa0273590:intron | 30.0% | |
GGGAAAGATTTCTAATGATT+GGG | - | chr2_3:5168934-5168953 | Msa0273590:intron | 30.0% | |
ATGATCCTTGATATTTGAAG+AGG | - | chr2_3:5168993-5169012 | Msa0273590:intron | 30.0% | |
TGATCCTTGATATTTGAAGA+GGG | - | chr2_3:5168994-5169013 | Msa0273590:intron | 30.0% | |
! | TGAAGAGGGTCTTATAAAAA+AGG | - | chr2_3:5169008-5169027 | Msa0273590:intron | 30.0% |
! | GAAGAGGGTCTTATAAAAAA+GGG | - | chr2_3:5169009-5169028 | Msa0273590:intron | 30.0% |
!!! | ATGTATTTTGAAATCCGTGA+TGG | - | chr2_3:5169089-5169108 | Msa0273590:intron | 30.0% |
!! | AGTTCTAAAGCAAGTTATGA+TGG | - | chr2_3:5169404-5169423 | Msa0273590:intron | 30.0% |
TATGAGTGTTATATAGGTGT+CGG | - | chr2_3:5169613-5169632 | Msa0273590:intron | 30.0% | |
GTTATAAATTGAGCAGGATT+AGG | + | chr2_3:5169787-5169806 | None:intergenic | 30.0% | |
GTTTCAGTTATAAATTGAGC+AGG | + | chr2_3:5169793-5169812 | None:intergenic | 30.0% | |
AATGTAGATTGCATTGTGTA+TGG | - | chr2_3:5169878-5169897 | Msa0273590:intron | 30.0% | |
! | TATACATTAGCCTGTACAAA+TGG | - | chr2_3:5169987-5170006 | Msa0273590:intron | 30.0% |
ATCAATGTTTCCATTTGTAC+AGG | + | chr2_3:5170000-5170019 | None:intergenic | 30.0% | |
!! | AAATGGAAACATTGATTCGT+TGG | - | chr2_3:5170004-5170023 | Msa0273590:intron | 30.0% |
!! | AATGGAAACATTGATTCGTT+GGG | - | chr2_3:5170005-5170024 | Msa0273590:intron | 30.0% |
! | CAACTTTCCAAGTATTTTTC+AGG | - | chr2_3:5170113-5170132 | Msa0273590:intron | 30.0% |
AAAGTTGCCTGAAAAATACT+TGG | + | chr2_3:5170123-5170142 | None:intergenic | 30.0% | |
!! | TTGTGAATATTAAGTTGACG+AGG | + | chr2_3:5170304-5170323 | None:intergenic | 30.0% |
TTCTCACAAGATTCTGTAAA+CGG | + | chr2_3:5170777-5170796 | None:intergenic | 30.0% | |
AACGTAATGTTGAAAGGTTT+AGG | - | chr2_3:5170855-5170874 | Msa0273590:intron | 30.0% | |
GTAATTGAAACAACAGTAGT+TGG | + | chr2_3:5170884-5170903 | None:intergenic | 30.0% | |
GTATGATTGTATCTTTAGCA+TGG | + | chr2_3:5171025-5171044 | None:intergenic | 30.0% | |
TACCACATCAAATATTCCTT+GGG | + | chr2_3:5171209-5171228 | None:intergenic | 30.0% | |
ATACCACATCAAATATTCCT+TGG | + | chr2_3:5171210-5171229 | None:intergenic | 30.0% | |
!!! | TTATACTGACTCTATTTTGC+AGG | + | chr2_3:5171252-5171271 | None:intergenic | 30.0% |
CATGGTAAATTTATTTCCTG+TGG | - | chr2_3:5171288-5171307 | Msa0273590:intron | 30.0% | |
! | TGGTGTTTTCTTCAAGATTT+CGG | - | chr2_3:5171308-5171327 | Msa0273590:intron | 30.0% |
! | TTTTCTTCAAGATTTCGGAT+GGG | - | chr2_3:5171313-5171332 | Msa0273590:intron | 30.0% |
CATTGAAAGAGTTTGAATCA+TGG | + | chr2_3:5171415-5171434 | None:intergenic | 30.0% | |
AAATTTGGATGTTGAGTCAT+TGG | - | chr2_3:5171455-5171474 | Msa0273590:intron | 30.0% | |
CAGTATCAAGGATAACATTA+AGG | + | chr2_3:5171556-5171575 | None:intergenic | 30.0% | |
ATAAATCTGCAACAGTATCA+AGG | + | chr2_3:5171568-5171587 | None:intergenic | 30.0% | |
ATTGCATCGTAAAATGATCA+TGG | + | chr2_3:5171625-5171644 | None:intergenic | 30.0% | |
TACCAGATGATAATAATGAC+TGG | - | chr2_3:5171789-5171808 | Msa0273590:intron | 30.0% | |
AACCATAATTTGGGAATTCT+AGG | - | chr2_3:5171946-5171965 | Msa0273590:CDS | 30.0% | |
! | ATTGATGTGGGTTATTATCA+CGG | - | chr2_3:5172170-5172189 | Msa0273590:CDS | 30.0% |
GTAGACATATCCACATTGTT+GGG | - | chr2_3:5164715-5164734 | Msa0273590:three_prime_UTR | 35.0% | |
TAGAAGAAGATTGTAACCGA+AGG | + | chr2_3:5164758-5164777 | None:intergenic | 35.0% | |
GTTGGAAATGTGATTGTGAA+AGG | + | chr2_3:5164781-5164800 | None:intergenic | 35.0% | |
ATTTCCAACTTCCAAGAGAA+TGG | - | chr2_3:5164792-5164811 | Msa0273590:three_prime_UTR | 35.0% | |
TAAGCAATGTAGATATACCG+AGG | + | chr2_3:5165035-5165054 | None:intergenic | 35.0% | |
!! | ATGTGGTTGATTTGTGTTAC+AGG | - | chr2_3:5165281-5165300 | Msa0273590:intron | 35.0% |
!! | CATTCTGATTTAGCTTGCAA+AGG | + | chr2_3:5165416-5165435 | None:intergenic | 35.0% |
CTTTGCAAGCTAAATCAGAA+TGG | - | chr2_3:5165414-5165433 | Msa0273590:intron | 35.0% | |
GCCTACTTTAATTGTCTTAC+TGG | + | chr2_3:5165765-5165784 | None:intergenic | 35.0% | |
!! | TTCTAAAATGTGGAGGCTAA+TGG | + | chr2_3:5165847-5165866 | None:intergenic | 35.0% |
!!! | AGCCTCCACATTTTAGAATT+AGG | - | chr2_3:5165849-5165868 | Msa0273590:intron | 35.0% |
!! | AGCCTAATTCTAAAATGTGG+AGG | + | chr2_3:5165854-5165873 | None:intergenic | 35.0% |
!! | CAGAGCCTAATTCTAAAATG+TGG | + | chr2_3:5165857-5165876 | None:intergenic | 35.0% |
TTTGGTCAACAAAAGTGGAT+AGG | - | chr2_3:5165877-5165896 | Msa0273590:intron | 35.0% | |
CATGTTTAGGTACTCTATTG+TGG | - | chr2_3:5166319-5166338 | Msa0273590:intron | 35.0% | |
TTTAGGTACTCTATTGTGGA+AGG | - | chr2_3:5166323-5166342 | Msa0273590:intron | 35.0% | |
! | TCTGGTTTATTTCCAGAATC+AGG | - | chr2_3:5166403-5166422 | Msa0273590:intron | 35.0% |
TCAGGTAATTTCTACAAAGC+AGG | - | chr2_3:5166421-5166440 | Msa0273590:intron | 35.0% | |
AATTTCTACAAAGCAGGCTA+AGG | - | chr2_3:5166427-5166446 | Msa0273590:intron | 35.0% | |
!! | ATAATTTGCTTCTGGGATAG+AGG | - | chr2_3:5166572-5166591 | Msa0273590:intron | 35.0% |
TCTTTATACAGATTCTCCTC+CGG | - | chr2_3:5166718-5166737 | Msa0273590:intron | 35.0% | |
AACAAAATGATCCTTCAGAC+CGG | + | chr2_3:5166740-5166759 | None:intergenic | 35.0% | |
!! | GGATCATTTTGTTTCAGCAA+TGG | - | chr2_3:5166747-5166766 | Msa0273590:intron | 35.0% |
! | CAATAAAAGCAAGCTTTTGG+GGG | + | chr2_3:5166841-5166860 | None:intergenic | 35.0% |
CTATTACTGTATAGGAAGTC+AGG | + | chr2_3:5167025-5167044 | None:intergenic | 35.0% | |
CTGACTTCCTATACAGTAAT+AGG | - | chr2_3:5167023-5167042 | Msa0273590:CDS | 35.0% | |
AATAGGTCAAATGCTAGAGA+CGG | - | chr2_3:5167040-5167059 | Msa0273590:CDS | 35.0% | |
AGTCAGACAATGCAAGAAAT+GGG | + | chr2_3:5167104-5167123 | None:intergenic | 35.0% | |
TAGTCAGACAATGCAAGAAA+TGG | + | chr2_3:5167105-5167124 | None:intergenic | 35.0% | |
GTCTGACTACTTAAGTTTGA+AGG | - | chr2_3:5167116-5167135 | Msa0273590:intron | 35.0% | |
TTAATGGTGTACTCCCAAAA+GGG | + | chr2_3:5167176-5167195 | None:intergenic | 35.0% | |
ATTAATGGTGTACTCCCAAA+AGG | + | chr2_3:5167177-5167196 | None:intergenic | 35.0% | |
AACAGAAGTTGCATTCACAT+TGG | + | chr2_3:5167362-5167381 | None:intergenic | 35.0% | |
!!! | GCGTATATTTTTTCAGTCCT+TGG | - | chr2_3:5167530-5167549 | Msa0273590:intron | 35.0% |
!!! | ATTTTTTCAGTCCTTGGATG+CGG | - | chr2_3:5167536-5167555 | Msa0273590:intron | 35.0% |
! | TGTCATTGGTTGAAATCACA+GGG | + | chr2_3:5167614-5167633 | None:intergenic | 35.0% |
ACCAATGACAGACTTACATT+AGG | - | chr2_3:5167624-5167643 | Msa0273590:intron | 35.0% | |
CCAATGACAGACTTACATTA+GGG | - | chr2_3:5167625-5167644 | Msa0273590:intron | 35.0% | |
GAGAAGTAAATGCTACTCTT+AGG | - | chr2_3:5167704-5167723 | Msa0273590:intron | 35.0% | |
CAGCTATCTATTAAAACAGC+AGG | + | chr2_3:5167789-5167808 | None:intergenic | 35.0% | |
TATCCAATATCTGCATAGGA+TGG | - | chr2_3:5167828-5167847 | Msa0273590:intron | 35.0% | |
TAGGATGGAACTATTATACG+GGG | - | chr2_3:5167843-5167862 | Msa0273590:intron | 35.0% | |
ATGGAACCTATTAAGAAGGT+AGG | - | chr2_3:5167900-5167919 | Msa0273590:intron | 35.0% | |
CATTGACCTACCTTCTTAAT+AGG | + | chr2_3:5167909-5167928 | None:intergenic | 35.0% | |
GGCATAATGAGTTAATGACA+CGG | + | chr2_3:5167938-5167957 | None:intergenic | 35.0% | |
TCTCAAATATAATCCTGCCA+AGG | + | chr2_3:5168187-5168206 | None:intergenic | 35.0% | |
GTCAATCTACTGAAAGTCAT+AGG | - | chr2_3:5168523-5168542 | Msa0273590:intron | 35.0% | |
AAGACCCTCTTCAAATATCA+AGG | + | chr2_3:5169001-5169020 | None:intergenic | 35.0% | |
!!! | TATTTTGAAATCCGTGATGG+TGG | - | chr2_3:5169092-5169111 | Msa0273590:intron | 35.0% |
!!! | ATTTTGAAATCCGTGATGGT+GGG | - | chr2_3:5169093-5169112 | Msa0273590:intron | 35.0% |
TTGAGAAATGTTGATCACTG+GGG | + | chr2_3:5169504-5169523 | None:intergenic | 35.0% | |
GTTGAGAAATGTTGATCACT+GGG | + | chr2_3:5169505-5169524 | None:intergenic | 35.0% | |
TGTTGAGAAATGTTGATCAC+TGG | + | chr2_3:5169506-5169525 | None:intergenic | 35.0% | |
TTCTCAACACATGTAACTCT+TGG | - | chr2_3:5169517-5169536 | Msa0273590:intron | 35.0% | |
ACATGTAACTCTTGGATCTA+CGG | - | chr2_3:5169525-5169544 | Msa0273590:intron | 35.0% | |
AGCTCGTATGAGTGTTATAT+AGG | - | chr2_3:5169607-5169626 | Msa0273590:intron | 35.0% | |
!! | ATGGAAACATTGATTCGTTG+GGG | - | chr2_3:5170006-5170025 | Msa0273590:intron | 35.0% |
CAAGTCAGTAAGCATCTAAT+GGG | + | chr2_3:5170215-5170234 | None:intergenic | 35.0% | |
! | AAACTGTTGTAGGTATTGCT+GGG | - | chr2_3:5170236-5170255 | Msa0273590:intron | 35.0% |
! | TTGGGGAGATTATTTCTTCA+CGG | - | chr2_3:5170261-5170280 | Msa0273590:intron | 35.0% |
! | GATGCTCTAAATCGAACATA+TGG | - | chr2_3:5170739-5170758 | Msa0273590:intron | 35.0% |
TCCTTCGTATTGAAACTACT+TGG | - | chr2_3:5170798-5170817 | Msa0273590:intron | 35.0% | |
ACCAAGTAGTTTCAATACGA+AGG | + | chr2_3:5170802-5170821 | None:intergenic | 35.0% | |
AGGTTGCACTAAGAAATGAA+GGG | + | chr2_3:5170919-5170938 | None:intergenic | 35.0% | |
TAGGTTGCACTAAGAAATGA+AGG | + | chr2_3:5170920-5170939 | None:intergenic | 35.0% | |
TTCTGGTATATCATGTCTCT+AGG | + | chr2_3:5170939-5170958 | None:intergenic | 35.0% | |
! | AGTGAAACGGTATAGTTTTC+TGG | + | chr2_3:5170956-5170975 | None:intergenic | 35.0% |
TTCCCAAGGAATATTTGATG+TGG | - | chr2_3:5171204-5171223 | Msa0273590:intron | 35.0% | |
TTTGCAGGATGAACACATTT+GGG | + | chr2_3:5171237-5171256 | None:intergenic | 35.0% | |
! | TTTTGCAGGATGAACACATT+TGG | + | chr2_3:5171238-5171257 | None:intergenic | 35.0% |
AATCTCTGATGTTTACAGCA+TGG | - | chr2_3:5171270-5171289 | Msa0273590:intron | 35.0% | |
AATCTTGAAGAAAACACCAC+AGG | + | chr2_3:5171307-5171326 | None:intergenic | 35.0% | |
! | GTTTTCTTCAAGATTTCGGA+TGG | - | chr2_3:5171312-5171331 | Msa0273590:intron | 35.0% |
GATACTGTTGCAGATTTATG+TGG | - | chr2_3:5171569-5171588 | Msa0273590:CDS | 35.0% | |
ACTTCATGTATCTCTCTACT+AGG | + | chr2_3:5171747-5171766 | None:intergenic | 35.0% | |
AGCCAGTCATTATTATCATC+TGG | + | chr2_3:5171794-5171813 | None:intergenic | 35.0% | |
CAGACTGCAAATGTATGATT+TGG | + | chr2_3:5171845-5171864 | None:intergenic | 35.0% | |
CACCTAGAATTCCCAAATTA+TGG | + | chr2_3:5171951-5171970 | None:intergenic | 35.0% | |
TTTGGGAATTCTAGGTGAAT+TGG | - | chr2_3:5171954-5171973 | Msa0273590:CDS | 35.0% | |
GGTAGACATATCCACATTGT+TGG | - | chr2_3:5164714-5164733 | Msa0273590:three_prime_UTR | 40.0% | |
ACATTGTTGGGCTCGAAATT+GGG | - | chr2_3:5164727-5164746 | Msa0273590:three_prime_UTR | 40.0% | |
AGAAGATTGTAACCGAAGGT+GGG | + | chr2_3:5164754-5164773 | None:intergenic | 40.0% | |
AAGAAGATTGTAACCGAAGG+TGG | + | chr2_3:5164755-5164774 | None:intergenic | 40.0% | |
TTGAACACGTCTTTGATCAG+AGG | + | chr2_3:5165152-5165171 | None:intergenic | 40.0% | |
!! | TGGTTGATTTGTGTTACAGG+TGG | - | chr2_3:5165284-5165303 | Msa0273590:intron | 40.0% |
CCTAGAACGTATATCTCCAA+CGG | + | chr2_3:5165315-5165334 | None:intergenic | 40.0% | |
! | ATATACGTTCTAGGTGTCTG+AGG | - | chr2_3:5165321-5165340 | Msa0273590:intron | 40.0% |
!! | TTAGCTTGCAAAGGATCAAG+TGG | + | chr2_3:5165407-5165426 | None:intergenic | 40.0% |
TGCTATTCAGGAGAGCTTAT+TGG | - | chr2_3:5165652-5165671 | Msa0273590:CDS | 40.0% | |
GAATAAGCTGAAAACACGTG+TGG | - | chr2_3:5165674-5165693 | Msa0273590:CDS | 40.0% | |
ACCCCTAGTTAGCAACTTAA+GGG | + | chr2_3:5165787-5165806 | None:intergenic | 40.0% | |
CTCTGTTTGGTCAACAAAAG+TGG | - | chr2_3:5165872-5165891 | Msa0273590:intron | 40.0% | |
! | AGCTAGCCTATAGTAGTGTT+TGG | - | chr2_3:5165905-5165924 | Msa0273590:intron | 40.0% |
! | TGGAAGGTGATCACGTTTTA+TGG | - | chr2_3:5166339-5166358 | Msa0273590:intron | 40.0% |
! | GGTGATCACGTTTTATGGAA+AGG | - | chr2_3:5166344-5166363 | Msa0273590:intron | 40.0% |
!! | CATTTTGTTTCAGCAATGGC+AGG | - | chr2_3:5166751-5166770 | Msa0273590:intron | 40.0% |
ATTCAGCAAGATACTTTCCC+TGG | - | chr2_3:5166787-5166806 | Msa0273590:intron | 40.0% | |
CGGCACAAAAAAGAAAACCA+GGG | + | chr2_3:5166807-5166826 | None:intergenic | 40.0% | |
!! | CCTGGTTTTCTTTTTTGTGC+CGG | - | chr2_3:5166805-5166824 | Msa0273590:intron | 40.0% |
! | GGAAGTCAGGGTATTTAATC+AGG | + | chr2_3:5167012-5167031 | None:intergenic | 40.0% |
AGTGAAGTAAATAGCAACCC+TGG | + | chr2_3:5167074-5167093 | None:intergenic | 40.0% | |
!! | TCCTTGCAGACTTTTGAAGA+AGG | - | chr2_3:5167145-5167164 | Msa0273590:intron | 40.0% |
ACCTTCTTCAAAAGTCTGCA+AGG | + | chr2_3:5167149-5167168 | None:intergenic | 40.0% | |
! | TGAAGAAGGTGATTCCCTTT+TGG | - | chr2_3:5167159-5167178 | Msa0273590:intron | 40.0% |
! | GAAGAAGGTGATTCCCTTTT+GGG | - | chr2_3:5167160-5167179 | Msa0273590:intron | 40.0% |
!! | GTTTTACTTTGGTGATACGC+TGG | - | chr2_3:5167379-5167398 | Msa0273590:intron | 40.0% |
CAAAAATATTGCCGCATCCA+AGG | + | chr2_3:5167550-5167569 | None:intergenic | 40.0% | |
TTGAAATCACAGGGAGAACA+AGG | + | chr2_3:5167605-5167624 | None:intergenic | 40.0% | |
! | CTGTCATTGGTTGAAATCAC+AGG | + | chr2_3:5167615-5167634 | None:intergenic | 40.0% |
CCCTAATGTAAGTCTGTCAT+TGG | + | chr2_3:5167628-5167647 | None:intergenic | 40.0% | |
GTTCCATCCTATGCAGATAT+TGG | + | chr2_3:5167834-5167853 | None:intergenic | 40.0% | |
GAAATTTCACATCCAACCAG+TGG | - | chr2_3:5167873-5167892 | Msa0273590:intron | 40.0% | |
AATAGGTTCCATTGTTCCAC+TGG | + | chr2_3:5167892-5167911 | None:intergenic | 40.0% | |
! | CAAGCCTTATCTCACTAAGT+GGG | - | chr2_3:5168062-5168081 | Msa0273590:intron | 40.0% |
! | AAGCCTTATCTCACTAAGTG+GGG | - | chr2_3:5168063-5168082 | Msa0273590:intron | 40.0% |
TTATCTCACTAAGTGGGGTT+GGG | - | chr2_3:5168068-5168087 | Msa0273590:intron | 40.0% | |
TAAAAGGTGAGGGTTGTGTT+AGG | + | chr2_3:5168147-5168166 | None:intergenic | 40.0% | |
AAATATAATCCTGCCAAGGC+CGG | + | chr2_3:5168183-5168202 | None:intergenic | 40.0% | |
AAATGGGGAATGGTTCTTCA+AGG | - | chr2_3:5168221-5168240 | Msa0273590:CDS | 40.0% | |
AATGGGGAATGGTTCTTCAA+GGG | - | chr2_3:5168222-5168241 | Msa0273590:CDS | 40.0% | |
ATTACCACCACTATGACTGT+CGG | + | chr2_3:5168251-5168270 | None:intergenic | 40.0% | |
ATGTCGCATGAAAGTTGGAT+TGG | - | chr2_3:5168303-5168322 | Msa0273590:intron | 40.0% | |
TATAAACTTAGGTAGGGGGT+TGG | - | chr2_3:5168416-5168435 | Msa0273590:intron | 40.0% | |
CACTCGAACGTGATAGTAAT+TGG | - | chr2_3:5168497-5168516 | Msa0273590:intron | 40.0% | |
! | GAGATTTTACACTATGCTGC+TGG | - | chr2_3:5168571-5168590 | Msa0273590:intron | 40.0% |
CAGCTTAAGCATTTACCTCA+TGG | + | chr2_3:5168734-5168753 | None:intergenic | 40.0% | |
GAGGTAAATGCTTAAGCTGT+TGG | - | chr2_3:5168735-5168754 | Msa0273590:intron | 40.0% | |
GACAACAGAATTTCGCAAGA+GGG | - | chr2_3:5169031-5169050 | Msa0273590:CDS | 40.0% | |
TAAAATAGCACCCACCATCA+CGG | + | chr2_3:5169106-5169125 | None:intergenic | 40.0% | |
GTGTTCCTAACTATGAAGCA+CGG | - | chr2_3:5169209-5169228 | Msa0273590:intron | 40.0% | |
TGAGAAATGTTGATCACTGG+GGG | + | chr2_3:5169503-5169522 | None:intergenic | 40.0% | |
TTACTTTGACACTCTTGCAC+CGG | + | chr2_3:5169642-5169661 | None:intergenic | 40.0% | |
ACACTCCTATGACACTTGTA+CGG | + | chr2_3:5169715-5169734 | None:intergenic | 40.0% | |
TACGAAGCACAGAAATCTCT+AGG | + | chr2_3:5169760-5169779 | None:intergenic | 40.0% | |
TAGAGATTTCTGTGCTTCGT+AGG | - | chr2_3:5169759-5169778 | Msa0273590:intron | 40.0% | |
CTTTGAATAGGTCTTTCCCT+CGG | - | chr2_3:5169826-5169845 | Msa0273590:intron | 40.0% | |
AGATTGCATTGTGTATGGCA+TGG | - | chr2_3:5169883-5169902 | Msa0273590:intron | 40.0% | |
GATTGCATTGTGTATGGCAT+GGG | - | chr2_3:5169884-5169903 | Msa0273590:intron | 40.0% | |
GGGGCAGATTGAAGTAAAAA+GGG | + | chr2_3:5169912-5169931 | None:intergenic | 40.0% | |
AGGGGCAGATTGAAGTAAAA+AGG | + | chr2_3:5169913-5169932 | None:intergenic | 40.0% | |
TGTGAGAGTCTTACCAATGA+GGG | + | chr2_3:5169932-5169951 | None:intergenic | 40.0% | |
TTGTGAGAGTCTTACCAATG+AGG | + | chr2_3:5169933-5169952 | None:intergenic | 40.0% | |
GCAAGTCAGTAAGCATCTAA+TGG | + | chr2_3:5170216-5170235 | None:intergenic | 40.0% | |
!! | ACTGACTTGCAAACTGTTGT+AGG | - | chr2_3:5170226-5170245 | Msa0273590:intron | 40.0% |
! | CAAACTGTTGTAGGTATTGC+TGG | - | chr2_3:5170235-5170254 | Msa0273590:intron | 40.0% |
! | AACTGTTGTAGGTATTGCTG+GGG | - | chr2_3:5170237-5170256 | Msa0273590:intron | 40.0% |
! | CATTACATGGATTGACTCTG+AGG | + | chr2_3:5170359-5170378 | None:intergenic | 40.0% |
CTCAGAGTCAATCCATGTAA+TGG | - | chr2_3:5170357-5170376 | Msa0273590:intron | 40.0% | |
GGAAAATAAAGGCAGAGTCT+TGG | + | chr2_3:5170401-5170420 | None:intergenic | 40.0% | |
GAAACATGGGCTTAACATGT+TGG | + | chr2_3:5170422-5170441 | None:intergenic | 40.0% | |
CCTGGCATATCATGAAACAT+GGG | + | chr2_3:5170435-5170454 | None:intergenic | 40.0% | |
TCTGTTAATAACACCATGCC+TGG | + | chr2_3:5170453-5170472 | None:intergenic | 40.0% | |
TGTTAAATGGCACTCATGAC+CGG | - | chr2_3:5170671-5170690 | Msa0273590:intron | 40.0% | |
! | CTGAAAATCCATTAGTCTCC+CGG | + | chr2_3:5170693-5170712 | None:intergenic | 40.0% |
AGATTCTGTAAACGGTTGCA+AGG | + | chr2_3:5170769-5170788 | None:intergenic | 40.0% | |
CTAAGAAATGAAGGGGACAA+TGG | + | chr2_3:5170911-5170930 | None:intergenic | 40.0% | |
GGTTGCACTAAGAAATGAAG+GGG | + | chr2_3:5170918-5170937 | None:intergenic | 40.0% | |
TTGAGATGGCACTAGTGAAA+CGG | + | chr2_3:5170969-5170988 | None:intergenic | 40.0% | |
! | TTCTGCTGATGTTGACTGTT+TGG | - | chr2_3:5171180-5171199 | Msa0273590:intron | 40.0% |
TTGGAGTGACATTGTGAAGT+TGG | - | chr2_3:5171474-5171493 | Msa0273590:intron | 40.0% | |
TCCCTACTTGATCCTAAAGT+GGG | - | chr2_3:5171679-5171698 | Msa0273590:intron | 40.0% | |
!! | ACCCACTTTAGGATCAAGTA+GGG | + | chr2_3:5171683-5171702 | None:intergenic | 40.0% |
!! | TACCCACTTTAGGATCAAGT+AGG | + | chr2_3:5171684-5171703 | None:intergenic | 40.0% |
! | AGAGCTCTAATCAGTGACTT+CGG | + | chr2_3:5171718-5171737 | None:intergenic | 40.0% |
GTCTGTCATCACAGTATACA+TGG | - | chr2_3:5171860-5171879 | Msa0273590:intron | 40.0% | |
CAATTTCGAGCCCAACAATG+TGG | + | chr2_3:5164728-5164747 | None:intergenic | 45.0% | |
CACATTGTTGGGCTCGAAAT+TGG | - | chr2_3:5164726-5164745 | Msa0273590:three_prime_UTR | 45.0% | |
GAAGATTGTAACCGAAGGTG+GGG | + | chr2_3:5164753-5164772 | None:intergenic | 45.0% | |
GAAGCCATTCTCTTGGAAGT+TGG | + | chr2_3:5164799-5164818 | None:intergenic | 45.0% | |
TGGAAAGGAAGCCATTCTCT+TGG | + | chr2_3:5164806-5164825 | None:intergenic | 45.0% | |
GGGAGAAGATGGAATTGGAA+AGG | + | chr2_3:5164821-5164840 | None:intergenic | 45.0% | |
CGATTGGGAGAAGATGGAAT+TGG | + | chr2_3:5164826-5164845 | None:intergenic | 45.0% | |
TGATTGCGATTGGGAGAAGA+TGG | + | chr2_3:5164832-5164851 | None:intergenic | 45.0% | |
TAGGGTTAGAGTAACAGCGA+CGG | + | chr2_3:5164855-5164874 | None:intergenic | 45.0% | |
CTCTTTAGTACCAACACCTC+AGG | - | chr2_3:5165119-5165138 | Msa0273590:three_prime_UTR | 45.0% | |
! | ACGTCTTTGATCAGAGGTGT+TGG | + | chr2_3:5165146-5165165 | None:intergenic | 45.0% |
GATTTGTGTTACAGGTGGTC+CGG | - | chr2_3:5165289-5165308 | Msa0273590:intron | 45.0% | |
CCGTTGGAGATATACGTTCT+AGG | - | chr2_3:5165312-5165331 | Msa0273590:intron | 45.0% | |
AAGTACAGCAGAAGCTCTTG+CGG | - | chr2_3:5165355-5165374 | Msa0273590:intron | 45.0% | |
! | CTTGCGGTTCGAAATTTGCT+TGG | - | chr2_3:5165371-5165390 | Msa0273590:intron | 45.0% |
! | AGGCCCTTAAGTTGCTAACT+AGG | - | chr2_3:5165781-5165800 | Msa0273590:CDS | 45.0% |
! | GGCCCTTAAGTTGCTAACTA+GGG | - | chr2_3:5165782-5165801 | Msa0273590:CDS | 45.0% |
! | GCCCTTAAGTTGCTAACTAG+GGG | - | chr2_3:5165783-5165802 | Msa0273590:CDS | 45.0% |
CACCCCTAGTTAGCAACTTA+AGG | + | chr2_3:5165788-5165807 | None:intergenic | 45.0% | |
! | CTTAAGTTGCTAACTAGGGG+TGG | - | chr2_3:5165786-5165805 | Msa0273590:intron | 45.0% |
AAGGCGTGTCAAAACCCTAT+AGG | - | chr2_3:5166363-5166382 | Msa0273590:intron | 45.0% | |
AGGCGTGTCAAAACCCTATA+GGG | - | chr2_3:5166364-5166383 | Msa0273590:intron | 45.0% | |
GCTCGAATAGTCTCCCTATA+GGG | + | chr2_3:5166380-5166399 | None:intergenic | 45.0% | |
AGCTCGAATAGTCTCCCTAT+AGG | + | chr2_3:5166381-5166400 | None:intergenic | 45.0% | |
! | GGAGACTATTCGAGCTTTTC+TGG | - | chr2_3:5166385-5166404 | Msa0273590:intron | 45.0% |
AAAATGATCCTTCAGACCGG+AGG | + | chr2_3:5166737-5166756 | None:intergenic | 45.0% | |
CCGGCACAAAAAAGAAAACC+AGG | + | chr2_3:5166808-5166827 | None:intergenic | 45.0% | |
!! | AAAGCAAGCTTTTGGGGGAA+GGG | + | chr2_3:5166836-5166855 | None:intergenic | 45.0% |
!! | AAAAGCAAGCTTTTGGGGGA+AGG | + | chr2_3:5166837-5166856 | None:intergenic | 45.0% |
TTGTGCCATAAAGACCACAG+TGG | - | chr2_3:5166871-5166890 | Msa0273590:intron | 45.0% | |
TGTGCCATAAAGACCACAGT+GGG | - | chr2_3:5166872-5166891 | Msa0273590:intron | 45.0% | |
TGATCCCACTGTGGTCTTTA+TGG | + | chr2_3:5166879-5166898 | None:intergenic | 45.0% | |
GTTCTACAATGATCCCACTG+TGG | + | chr2_3:5166888-5166907 | None:intergenic | 45.0% | |
TAGAGACGGCATTACTACCA+GGG | - | chr2_3:5167054-5167073 | Msa0273590:CDS | 45.0% | |
ACATCCAACCAGTGGAACAA+TGG | - | chr2_3:5167881-5167900 | Msa0273590:intron | 45.0% | |
CCACTTAGTGAGATAAGGCT+TGG | + | chr2_3:5168064-5168083 | None:intergenic | 45.0% | |
! | CCAAGCCTTATCTCACTAAG+TGG | - | chr2_3:5168061-5168080 | Msa0273590:intron | 45.0% |
CAACCCCACTTAGTGAGATA+AGG | + | chr2_3:5168069-5168088 | None:intergenic | 45.0% | |
CTTATCTCACTAAGTGGGGT+TGG | - | chr2_3:5168067-5168086 | Msa0273590:intron | 45.0% | |
CTAAGTGGGGTTGGGTTATT+TGG | - | chr2_3:5168076-5168095 | Msa0273590:intron | 45.0% | |
!! | AAGTTTTACGTTGGCTGTCG+AGG | - | chr2_3:5168121-5168140 | Msa0273590:intron | 45.0% |
ATGGGGAATGGTTCTTCAAG+GGG | - | chr2_3:5168223-5168242 | Msa0273590:CDS | 45.0% | |
TGCTGATGTCGCATGAAAGT+TGG | - | chr2_3:5168298-5168317 | Msa0273590:intron | 45.0% | |
!! | TACACTATGCTGCTGGTTCT+TGG | - | chr2_3:5168578-5168597 | Msa0273590:intron | 45.0% |
GTGTTCTACATGTCAAGCGA+GGG | - | chr2_3:5168696-5168715 | Msa0273590:intron | 45.0% | |
! | GGGAAAGAATTTGCTCCATG+AGG | - | chr2_3:5168716-5168735 | Msa0273590:intron | 45.0% |
ATGGAAGATGCAGCTAGAGA+AGG | - | chr2_3:5168861-5168880 | Msa0273590:intron | 45.0% | |
GGACAACAGAATTTCGCAAG+AGG | - | chr2_3:5169030-5169049 | Msa0273590:CDS | 45.0% | |
!! | GCAAGAGGGTGTTACAGATA+GGG | - | chr2_3:5169045-5169064 | Msa0273590:CDS | 45.0% |
AGAGTCCGTGCTTCATAGTT+AGG | + | chr2_3:5169217-5169236 | None:intergenic | 45.0% | |
AGAAATGTTGATCACTGGGG+GGG | + | chr2_3:5169501-5169520 | None:intergenic | 45.0% | |
GAGAAATGTTGATCACTGGG+GGG | + | chr2_3:5169502-5169521 | None:intergenic | 45.0% | |
AACACTCATACGAGCTGTCT+CGG | + | chr2_3:5169603-5169622 | None:intergenic | 45.0% | |
!! | GTTATATAGGTGTCGGACAC+CGG | - | chr2_3:5169620-5169639 | Msa0273590:intron | 45.0% |
ATGTGCCGTACAAGTGTCAT+AGG | - | chr2_3:5169707-5169726 | Msa0273590:intron | 45.0% | |
!! | GCACAGAAATCTCTAGGACT+AGG | + | chr2_3:5169754-5169773 | None:intergenic | 45.0% |
TACTTCAATCTGCCCCTCAT+TGG | - | chr2_3:5169916-5169935 | Msa0273590:intron | 45.0% | |
GTGAGAGTCTTACCAATGAG+GGG | + | chr2_3:5169931-5169950 | None:intergenic | 45.0% | |
! | TTGTAGGTATTGCTGGGGAT+TGG | - | chr2_3:5170242-5170261 | Msa0273590:intron | 45.0% |
! | TGTAGGTATTGCTGGGGATT+GGG | - | chr2_3:5170243-5170262 | Msa0273590:intron | 45.0% |
AGTTGACGAGGAATACCTTG+AGG | + | chr2_3:5170292-5170311 | None:intergenic | 45.0% | |
ATCCATGTAATGGCTGAGAG+TGG | - | chr2_3:5170367-5170386 | Msa0273590:intron | 45.0% | |
TAAAGGCAGAGTCTTGGTGA+TGG | + | chr2_3:5170395-5170414 | None:intergenic | 45.0% | |
CCCATGTTTCATGATATGCC+AGG | - | chr2_3:5170432-5170451 | Msa0273590:intron | 45.0% | |
GCCTGGCATATCATGAAACA+TGG | + | chr2_3:5170436-5170455 | None:intergenic | 45.0% | |
GTTTCATGATATGCCAGGCA+TGG | - | chr2_3:5170437-5170456 | Msa0273590:intron | 45.0% | |
TGTGAAGCTCATGCATAGGT+GGG | + | chr2_3:5170520-5170539 | None:intergenic | 45.0% | |
ACAGTGTGAAGCTCATGCAT+AGG | + | chr2_3:5170524-5170543 | None:intergenic | 45.0% | |
GTTAAATGGCACTCATGACC+GGG | - | chr2_3:5170672-5170691 | Msa0273590:intron | 45.0% | |
CTCCCTACTTGATCCTAAAG+TGG | - | chr2_3:5171678-5171697 | Msa0273590:intron | 45.0% | |
AGAGAGATACATGAAGTCGC+AGG | - | chr2_3:5171750-5171769 | Msa0273590:intron | 45.0% | |
! | TGATTTGGCAGTCAGTAGTG+AGG | + | chr2_3:5171830-5171849 | None:intergenic | 45.0% |
GACTCTGCATTTCGATGGTA+GGG | + | chr2_3:5171990-5172009 | None:intergenic | 45.0% | |
TGACTCTGCATTTCGATGGT+AGG | + | chr2_3:5171991-5172010 | None:intergenic | 45.0% | |
TCTCTGACTCTGCATTTCGA+TGG | + | chr2_3:5171995-5172014 | None:intergenic | 45.0% | |
AAGACAAGTAGAGCAGGCTG+TGG | + | chr2_3:5164895-5164914 | None:intergenic | 50.0% | |
CCTGCTCTACTTGTCTTCTC+CGG | - | chr2_3:5164898-5164917 | Msa0273590:three_prime_UTR | 50.0% | |
AAGAACATGAGCGACACGAG+TGG | + | chr2_3:5164968-5164987 | None:intergenic | 50.0% | |
GTTCTTCCCGTTTCCGATGA+TGG | - | chr2_3:5164982-5165001 | Msa0273590:intron | 50.0% | |
CTACCACCATCATCGGAAAC+GGG | + | chr2_3:5164991-5165010 | None:intergenic | 50.0% | |
GCTACCACCATCATCGGAAA+CGG | + | chr2_3:5164992-5165011 | None:intergenic | 50.0% | |
TTGGTGTGTCAGTGTCGTGT+CGG | - | chr2_3:5165230-5165249 | Msa0273590:CDS | 50.0% | |
GAACGTATATCTCCAACGGC+CGG | + | chr2_3:5165311-5165330 | None:intergenic | 50.0% | |
!! | AAGCAAGCTTTTGGGGGAAG+GGG | + | chr2_3:5166835-5166854 | None:intergenic | 50.0% |
CTAGAGACGGCATTACTACC+AGG | - | chr2_3:5167053-5167072 | Msa0273590:CDS | 50.0% | |
ATACGCTGGTATTGCCAAGC+TGG | - | chr2_3:5167393-5167412 | Msa0273590:intron | 50.0% | |
AGGGAGAACAAGGCTTTCAG+GGG | + | chr2_3:5167595-5167614 | None:intergenic | 50.0% | |
CAGGGAGAACAAGGCTTTCA+GGG | + | chr2_3:5167596-5167615 | None:intergenic | 50.0% | |
ACAGGGAGAACAAGGCTTTC+AGG | + | chr2_3:5167597-5167616 | None:intergenic | 50.0% | |
GGTTCCATTGTTCCACTGGT+TGG | + | chr2_3:5167888-5167907 | None:intergenic | 50.0% | |
! | CACAACCCTCACCTTTTACC+CGG | - | chr2_3:5168149-5168168 | Msa0273590:intron | 50.0% |
! | ACAACCCTCACCTTTTACCC+GGG | - | chr2_3:5168150-5168169 | Msa0273590:intron | 50.0% |
!! | GGGTTGGCCCTTACAATGAT+GGG | - | chr2_3:5168432-5168451 | Msa0273590:intron | 50.0% |
GGTGTTCTACATGTCAAGCG+AGG | - | chr2_3:5168695-5168714 | Msa0273590:intron | 50.0% | |
!! | CGCAAGAGGGTGTTACAGAT+AGG | - | chr2_3:5169044-5169063 | Msa0273590:CDS | 50.0% |
!! | GAGGGTGTTACAGATAGGGA+CGG | - | chr2_3:5169049-5169068 | Msa0273590:CDS | 50.0% |
ACTCTTGGATCTACGGTGTG+TGG | - | chr2_3:5169532-5169551 | Msa0273590:intron | 50.0% | |
TACGGTGTGTGGAAGCAAGA+GGG | - | chr2_3:5169543-5169562 | Msa0273590:intron | 50.0% | |
GACACTTGTACGGCACATGT+CGG | + | chr2_3:5169705-5169724 | None:intergenic | 50.0% | |
AATACAGCCGCATTAGCCGA+GGG | + | chr2_3:5169845-5169864 | None:intergenic | 50.0% | |
TAATACAGCCGCATTAGCCG+AGG | + | chr2_3:5169846-5169865 | None:intergenic | 50.0% | |
! | GTAGGTATTGCTGGGGATTG+GGG | - | chr2_3:5170244-5170263 | Msa0273590:intron | 50.0% |
CACCACTCTCAGCCATTACA+TGG | + | chr2_3:5170372-5170391 | None:intergenic | 50.0% | |
GTGTGAAGCTCATGCATAGG+TGG | + | chr2_3:5170521-5170540 | None:intergenic | 50.0% | |
ACTCATGACCGGGAGACTAA+TGG | - | chr2_3:5170682-5170701 | Msa0273590:intron | 50.0% | |
! | GTTGACTGTTTGGCTTCCCA+AGG | - | chr2_3:5171190-5171209 | Msa0273590:intron | 50.0% |
CGAAATGCAGAGTCAGAGAC+TGG | - | chr2_3:5171996-5172015 | Msa0273590:CDS | 50.0% | |
TCGAAATTGGGCCCCACCTT+CGG | - | chr2_3:5164739-5164758 | Msa0273590:three_prime_UTR | 55.0% | |
CAGCGACGGTGATTGCGATT+GGG | + | chr2_3:5164841-5164860 | None:intergenic | 55.0% | |
ACAGCGACGGTGATTGCGAT+TGG | + | chr2_3:5164842-5164861 | None:intergenic | 55.0% | |
GATGAGGAGGGTGAGGGTTA+GGG | + | chr2_3:5164873-5164892 | None:intergenic | 55.0% | |
AGTAGAGCAGGCTGTGGATG+AGG | + | chr2_3:5164889-5164908 | None:intergenic | 55.0% | |
CCGGAGAAGACAAGTAGAGC+AGG | + | chr2_3:5164901-5164920 | None:intergenic | 55.0% | |
GCTCTACTTGTCTTCTCCGG+TGG | - | chr2_3:5164901-5164920 | Msa0273590:three_prime_UTR | 55.0% | |
ATCTTCGACGACGCCGTTGA+AGG | + | chr2_3:5164932-5164951 | None:intergenic | 55.0% | |
! | CTTCCCGTTTCCGATGATGG+TGG | - | chr2_3:5164985-5165004 | Msa0273590:intron | 55.0% |
!! | AGCGGTGCTACCACCATCAT+CGG | + | chr2_3:5164998-5165017 | None:intergenic | 55.0% |
GAGGACGCGAACGATTTCAG+CGG | + | chr2_3:5165016-5165035 | None:intergenic | 55.0% | |
GCTGAAATCGTTCGCGTCCT+CGG | - | chr2_3:5165015-5165034 | Msa0273590:intron | 55.0% | |
!! | AGGTGTTGGTCCTGAGGTGT+TGG | + | chr2_3:5165132-5165151 | None:intergenic | 55.0% |
!! | GATCAGAGGTGTTGGTCCTG+AGG | + | chr2_3:5165138-5165157 | None:intergenic | 55.0% |
CAGATTCTCCTCCGGTCTGA+AGG | - | chr2_3:5166726-5166745 | Msa0273590:intron | 55.0% | |
!! | AGCAAGCTTTTGGGGGAAGG+GGG | + | chr2_3:5166834-5166853 | None:intergenic | 55.0% |
GGGAGAACAAGGCTTTCAGG+GGG | + | chr2_3:5167594-5167613 | None:intergenic | 55.0% | |
CAAGCCCGGGTAAAAGGTGA+GGG | + | chr2_3:5168157-5168176 | None:intergenic | 55.0% | |
! | CTCACCTTTTACCCGGGCTT+GGG | - | chr2_3:5168156-5168175 | Msa0273590:intron | 55.0% |
AGGGGATCCGACAGTCATAG+TGG | - | chr2_3:5168241-5168260 | Msa0273590:CDS | 55.0% | |
GGATCCGACAGTCATAGTGG+TGG | - | chr2_3:5168244-5168263 | Msa0273590:CDS | 55.0% | |
!! | GGGGTTGGCCCTTACAATGA+TGG | - | chr2_3:5168431-5168450 | Msa0273590:intron | 55.0% |
! | GGTGTTACAGATAGGGACGG+AGG | - | chr2_3:5169052-5169071 | Msa0273590:CDS | 55.0% |
CTACGGTGTGTGGAAGCAAG+AGG | - | chr2_3:5169542-5169561 | Msa0273590:intron | 55.0% | |
GGTCTTTCCCTCGGCTAATG+CGG | - | chr2_3:5169835-5169854 | Msa0273590:intron | 55.0% | |
TTCTTCACGGTCCTGCCTCA+AGG | - | chr2_3:5170274-5170293 | Msa0273590:intron | 55.0% | |
GACGAGGAATACCTTGAGGC+AGG | + | chr2_3:5170288-5170307 | None:intergenic | 55.0% | |
GGATGAGGAGGGTGAGGGTT+AGG | + | chr2_3:5164874-5164893 | None:intergenic | 60.0% | |
GCTGTGGATGAGGAGGGTGA+GGG | + | chr2_3:5164879-5164898 | None:intergenic | 60.0% | |
GAGCAGGCTGTGGATGAGGA+GGG | + | chr2_3:5164885-5164904 | None:intergenic | 60.0% | |
AGAGCAGGCTGTGGATGAGG+AGG | + | chr2_3:5164886-5164905 | None:intergenic | 60.0% | |
TCCGGTGGAACCGCCTTCAA+CGG | - | chr2_3:5164916-5164935 | Msa0273590:three_prime_UTR | 60.0% | |
TTCGACGACGCCGTTGAAGG+CGG | + | chr2_3:5164929-5164948 | None:intergenic | 60.0% | |
! | GTCAGTGTCGTGTCGGTGTC+TGG | - | chr2_3:5165237-5165256 | Msa0273590:CDS | 60.0% |
!! | TTTTGGGGGAAGGGGGACTC+CGG | + | chr2_3:5166827-5166846 | None:intergenic | 60.0% |
CCAAGCCCGGGTAAAAGGTG+AGG | + | chr2_3:5168158-5168177 | None:intergenic | 60.0% | |
! | CCTCACCTTTTACCCGGGCT+TGG | - | chr2_3:5168155-5168174 | Msa0273590:intron | 60.0% |
! | CTTTTACCCGGGCTTGGGAC+CGG | - | chr2_3:5168161-5168180 | Msa0273590:intron | 60.0% |
!! | CTCTAGGACTAGGCGTGTCG+CGG | + | chr2_3:5169744-5169763 | None:intergenic | 60.0% |
GGCTGTGGATGAGGAGGGTG+AGG | + | chr2_3:5164880-5164899 | None:intergenic | 65.0% | |
GCCGTTGAAGGCGGTTCCAC+CGG | + | chr2_3:5164920-5164939 | None:intergenic | 65.0% | |
GTTACAGGTGGTCCGGCCGT+TGG | - | chr2_3:5165296-5165315 | Msa0273590:intron | 65.0% | |
CGGTCCCAAGCCCGGGTAAA+AGG | + | chr2_3:5168163-5168182 | None:intergenic | 65.0% | |
CCAAGGCCGGTCCCAAGCCC+GGG | + | chr2_3:5168170-5168189 | None:intergenic | 75.0% | |
GCCAAGGCCGGTCCCAAGCC+CGG | + | chr2_3:5168171-5168190 | None:intergenic | 75.0% | |
GGCTTGGGACCGGCCTTGGC+AGG | - | chr2_3:5168171-5168190 | Msa0273590:intron | 75.0% | |
! | CCCGGGCTTGGGACCGGCCT+TGG | - | chr2_3:5168167-5168186 | Msa0273590:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 5164681 | 5172256 | 5164681 | ID=Msa0273590;Name=Msa0273590 |
chr2_3 | mRNA | 5164681 | 5172256 | 5164681 | ID=Msa0273590-mRNA-1;Parent=Msa0273590;Name=Msa0273590-mRNA-1;_AED=0.26;_eAED=0.26;_QI=31|0.90|0.91|1|0.90|0.83|12|372|463 |
chr2_3 | exon | 5164681 | 5164969 | 5164681 | ID=Msa0273590-mRNA-1:exon:2523;Parent=Msa0273590-mRNA-1 |
chr2_3 | exon | 5165056 | 5165270 | 5165056 | ID=Msa0273590-mRNA-1:exon:2522;Parent=Msa0273590-mRNA-1 |
chr2_3 | exon | 5165646 | 5165804 | 5165646 | ID=Msa0273590-mRNA-1:exon:2521;Parent=Msa0273590-mRNA-1 |
chr2_3 | exon | 5166148 | 5166273 | 5166148 | ID=Msa0273590-mRNA-1:exon:2520;Parent=Msa0273590-mRNA-1 |
chr2_3 | exon | 5166642 | 5166689 | 5166642 | ID=Msa0273590-mRNA-1:exon:2519;Parent=Msa0273590-mRNA-1 |
chr2_3 | exon | 5167000 | 5167101 | 5167000 | ID=Msa0273590-mRNA-1:exon:2518;Parent=Msa0273590-mRNA-1 |
chr2_3 | exon | 5168200 | 5168283 | 5168200 | ID=Msa0273590-mRNA-1:exon:2517;Parent=Msa0273590-mRNA-1 |
chr2_3 | exon | 5169020 | 5169091 | 5169020 | ID=Msa0273590-mRNA-1:exon:2516;Parent=Msa0273590-mRNA-1 |
chr2_3 | exon | 5169278 | 5169391 | 5169278 | ID=Msa0273590-mRNA-1:exon:2515;Parent=Msa0273590-mRNA-1 |
chr2_3 | exon | 5170513 | 5170609 | 5170513 | ID=Msa0273590-mRNA-1:exon:2514;Parent=Msa0273590-mRNA-1 |
chr2_3 | exon | 5171502 | 5171634 | 5171502 | ID=Msa0273590-mRNA-1:exon:2513;Parent=Msa0273590-mRNA-1 |
chr2_3 | exon | 5171901 | 5172256 | 5171901 | ID=Msa0273590-mRNA-1:exon:2512;Parent=Msa0273590-mRNA-1 |
chr2_3 | five_prime_UTR | 5172226 | 5172256 | 5172226 | ID=Msa0273590-mRNA-1:five_prime_utr;Parent=Msa0273590-mRNA-1 |
chr2_3 | CDS | 5171901 | 5172225 | 5171901 | ID=Msa0273590-mRNA-1:cds;Parent=Msa0273590-mRNA-1 |
chr2_3 | CDS | 5171502 | 5171634 | 5171502 | ID=Msa0273590-mRNA-1:cds;Parent=Msa0273590-mRNA-1 |
chr2_3 | CDS | 5170513 | 5170609 | 5170513 | ID=Msa0273590-mRNA-1:cds;Parent=Msa0273590-mRNA-1 |
chr2_3 | CDS | 5169278 | 5169391 | 5169278 | ID=Msa0273590-mRNA-1:cds;Parent=Msa0273590-mRNA-1 |
chr2_3 | CDS | 5169020 | 5169091 | 5169020 | ID=Msa0273590-mRNA-1:cds;Parent=Msa0273590-mRNA-1 |
chr2_3 | CDS | 5168200 | 5168283 | 5168200 | ID=Msa0273590-mRNA-1:cds;Parent=Msa0273590-mRNA-1 |
chr2_3 | CDS | 5167000 | 5167101 | 5167000 | ID=Msa0273590-mRNA-1:cds;Parent=Msa0273590-mRNA-1 |
chr2_3 | CDS | 5166642 | 5166689 | 5166642 | ID=Msa0273590-mRNA-1:cds;Parent=Msa0273590-mRNA-1 |
chr2_3 | CDS | 5166148 | 5166273 | 5166148 | ID=Msa0273590-mRNA-1:cds;Parent=Msa0273590-mRNA-1 |
chr2_3 | CDS | 5165646 | 5165804 | 5165646 | ID=Msa0273590-mRNA-1:cds;Parent=Msa0273590-mRNA-1 |
chr2_3 | CDS | 5165139 | 5165270 | 5165139 | ID=Msa0273590-mRNA-1:cds;Parent=Msa0273590-mRNA-1 |
chr2_3 | three_prime_UTR | 5165056 | 5165138 | 5165056 | ID=Msa0273590-mRNA-1:three_prime_utr;Parent=Msa0273590-mRNA-1 |
chr2_3 | three_prime_UTR | 5164681 | 5164969 | 5164681 | ID=Msa0273590-mRNA-1:three_prime_utr;Parent=Msa0273590-mRNA-1 |
Gene Sequence |
Protein sequence |