AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0697520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0697520 MtrunA17_Chr4g0050291 96.842 665 19 2 12 676 3 665 0.0 1329
Msa0697520 MtrunA17_Chr4g0050251 71.655 695 170 8 1 676 1 687 0.0 994
Msa0697520 MtrunA17_Chr4g0050261 71.140 693 148 8 25 672 41 726 0.0 981
Msa0697520 MtrunA17_Chr4g0026731 70.134 596 155 5 92 666 12 605 0.0 858
Msa0697520 MtrunA17_Chr4g0050221 60.256 624 233 9 30 651 6 616 0.0 747
Msa0697520 MtrunA17_Chr4g0050201 59.058 552 209 7 99 646 2 540 0.0 671
Msa0697520 MtrunA17_Chr6g0477811 52.093 645 285 7 37 670 47 678 0.0 647
Msa0697520 MtrunA17_Chr4g0039261 44.544 669 337 10 26 672 20 676 0.0 572
Msa0697520 MtrunA17_Chr4g0039251 45.495 677 337 10 10 667 39 702 0.0 556
Msa0697520 MtrunA17_Chr4g0039231 41.971 629 292 8 101 667 2 619 5.80e-159 473
Msa0697520 MtrunA17_Chr2g0327241 37.217 618 354 10 34 638 104 700 1.18e-127 394
Msa0697520 MtrunA17_Chr1g0176451 33.034 557 325 16 49 583 17 547 4.58e-76 255
Msa0697520 MtrunA17_Chr1g0213091 31.059 557 339 11 54 580 117 658 6.61e-75 256
Msa0697520 MtrunA17_Chr7g0263351 29.358 545 360 8 52 581 120 654 1.08e-74 255
Msa0697520 MtrunA17_Chr8g0384391 29.195 596 394 12 57 639 54 634 1.30e-74 252
Msa0697520 MtrunA17_Chr1g0208391 30.180 666 404 19 30 674 66 691 3.77e-73 250
Msa0697520 MtrunA17_Chr3g0130331 29.866 596 388 15 57 639 56 634 1.76e-72 246
Msa0697520 MtrunA17_Chr2g0316301 29.881 589 376 14 56 638 70 627 2.35e-72 246
Msa0697520 MtrunA17_Chr7g0267971 32.369 553 333 14 53 581 154 689 5.13e-72 247
Msa0697520 MtrunA17_Chr4g0065231 28.305 590 385 11 58 638 74 634 8.80e-70 239
Msa0697520 MtrunA17_Chr1g0176441 30.488 574 356 15 35 583 147 702 1.95e-68 238
Msa0697520 MtrunA17_Chr1g0200651 33.266 493 287 18 20 492 51 521 9.58e-62 218
Msa0697520 MtrunA17_Chr1g0198931 29.795 584 357 18 33 590 72 628 7.27e-60 213
Msa0697520 MtrunA17_Chr5g0408061 28.960 625 390 18 35 639 45 635 4.42e-59 210
Msa0697520 MtrunA17_Chr1g0202431 27.303 597 387 15 59 645 50 609 3.35e-58 207
Msa0697520 MtrunA17_Chr8g0359931 30.417 503 317 10 55 547 62 541 5.38e-56 201
Msa0697520 MtrunA17_Chr5g0446901 30.593 523 328 14 44 547 94 600 4.45e-55 198
Msa0697520 MtrunA17_Chr2g0318061 38.966 290 164 6 55 341 27 306 1.03e-53 189
Msa0697520 MtrunA17_Chr3g0102731 32.403 466 285 12 59 511 98 546 1.91e-52 191
Msa0697520 MtrunA17_Chr8g0393191 40.945 254 142 4 54 305 64 311 6.10e-51 189
Msa0697520 MtrunA17_Chr8g0393191 23.796 353 231 10 311 643 479 813 2.67e-18 89.4
Msa0697520 MtrunA17_Chr2g0331081 28.705 533 336 16 51 568 883 1386 4.52e-49 186
Msa0697520 MtrunA17_Chr2g0331081 25.079 634 394 16 58 638 178 783 4.44e-42 164
Msa0697520 MtrunA17_Chr0c20g0493841 27.145 641 391 15 46 636 154 768 3.55e-48 183
Msa0697520 MtrunA17_Chr0c20g0493841 26.692 532 338 14 53 565 852 1350 2.55e-41 162
Msa0697520 MtrunA17_Chr2g0332241 25.113 665 431 20 10 640 791 1422 7.70e-48 182
Msa0697520 MtrunA17_Chr2g0332241 23.871 620 407 15 58 634 166 763 5.40e-39 155
Msa0697520 MtrunA17_Chr7g0262251 25.410 610 384 16 15 580 771 1353 1.31e-47 181
Msa0697520 MtrunA17_Chr7g0262251 25.700 607 418 12 52 638 168 761 1.34e-40 160
Msa0697520 MtrunA17_Chr3g0104621 26.071 537 351 14 51 568 756 1265 3.94e-47 180
Msa0697520 MtrunA17_Chr3g0104621 27.157 626 388 15 55 636 52 653 6.78e-43 167
Msa0697520 MtrunA17_Chr7g0261971 26.180 657 420 18 14 639 819 1441 4.73e-47 179
Msa0697520 MtrunA17_Chr7g0261971 24.799 621 412 15 58 638 157 762 1.59e-39 157
Msa0697520 MtrunA17_Chr2g0332221 25.963 597 397 17 59 640 855 1421 4.82e-47 179
Msa0697520 MtrunA17_Chr2g0332221 24.194 620 405 14 58 634 166 763 2.08e-40 159
Msa0697520 MtrunA17_Chr4g0003981 25.581 602 390 17 59 639 866 1430 2.10e-46 177
Msa0697520 MtrunA17_Chr4g0003981 23.633 622 418 12 58 638 172 777 1.54e-35 144
Msa0697520 MtrunA17_Chr7g0262241 25.868 576 373 14 14 560 823 1373 2.23e-46 177
Msa0697520 MtrunA17_Chr7g0262241 24.640 625 408 14 58 638 161 766 3.09e-40 159
Msa0697520 MtrunA17_Chr7g0265981 26.403 606 403 16 49 639 873 1450 4.16e-46 177
Msa0697520 MtrunA17_Chr7g0265981 24.598 622 413 10 59 638 184 791 5.16e-42 164
Msa0697520 MtrunA17_Chr8g0340651 28.519 540 328 16 51 568 897 1400 4.56e-46 177
Msa0697520 MtrunA17_Chr8g0340651 25.154 648 411 16 58 661 177 794 5.16e-42 164
Msa0697520 MtrunA17_Chr2g0332211 25.000 608 405 17 51 640 931 1505 1.09e-45 176
Msa0697520 MtrunA17_Chr2g0332211 24.116 622 403 15 58 634 247 844 6.97e-39 155
Msa0697520 MtrunA17_Chr5g0411621 35.256 312 166 8 12 315 25 308 1.20e-45 173
Msa0697520 MtrunA17_Chr5g0411621 25.180 278 199 4 366 643 455 723 1.20e-22 103
Msa0697520 MtrunA17_Chr7g0265991 26.880 625 387 20 49 639 49 637 8.21e-45 170
Msa0697520 MtrunA17_Chr1g0171351 26.938 516 341 12 59 560 894 1387 2.84e-44 171
Msa0697520 MtrunA17_Chr1g0171351 24.760 626 403 17 59 636 176 781 2.66e-37 150
Msa0697520 MtrunA17_Chr7g0262231 25.813 523 354 10 51 560 875 1376 1.93e-43 169
Msa0697520 MtrunA17_Chr7g0262231 24.277 622 414 13 58 638 161 766 1.56e-40 160
Msa0697520 MtrunA17_Chr3g0138261 25.424 590 403 13 49 625 860 1425 1.94e-43 169
Msa0697520 MtrunA17_Chr3g0138261 25.080 622 393 16 58 630 165 762 2.04e-39 156
Msa0697520 MtrunA17_Chr7g0262261 26.761 639 424 18 28 639 760 1381 2.57e-43 168
Msa0697520 MtrunA17_Chr7g0262261 24.519 624 418 14 52 636 126 735 1.66e-40 160
Msa0697520 MtrunA17_Chr4g0062871 26.707 659 409 19 58 665 149 784 3.62e-43 168
Msa0697520 MtrunA17_Chr4g0062871 25.813 523 354 12 51 560 836 1337 5.90e-38 152
Msa0697520 MtrunA17_Chr7g0266001 26.087 621 401 13 59 636 63 668 4.73e-43 165
Msa0697520 MtrunA17_Chr7g0261951 25.344 655 428 16 14 639 823 1445 6.91e-43 167
Msa0697520 MtrunA17_Chr7g0261951 24.638 621 413 14 58 638 161 766 1.11e-40 160
Msa0697520 MtrunA17_Chr1g0148841 26.365 641 377 19 59 639 166 771 3.10e-42 165
Msa0697520 MtrunA17_Chr1g0148841 25.709 529 347 14 51 560 869 1370 3.99e-42 164
Msa0697520 MtrunA17_Chr4g0003971 25.871 603 387 17 59 639 825 1389 3.29e-42 165
Msa0697520 MtrunA17_Chr4g0003971 25.556 630 396 18 58 638 160 765 9.62e-41 160
Msa0697520 MtrunA17_Chr7g0262221 25.773 582 367 16 18 560 803 1358 3.47e-42 165
Msa0697520 MtrunA17_Chr7g0262221 24.921 630 408 15 58 636 162 777 2.88e-38 152
Msa0697520 MtrunA17_Chr1g0148811 24.575 647 422 20 19 637 803 1411 5.14e-42 164
Msa0697520 MtrunA17_Chr1g0148811 25.719 626 398 15 59 638 154 758 2.40e-34 140
Msa0697520 MtrunA17_Chr1g0199471 37.879 264 148 6 37 296 501 752 5.63e-42 164
Msa0697520 MtrunA17_Chr7g0265971 25.837 627 394 18 49 639 865 1456 6.14e-42 164
Msa0697520 MtrunA17_Chr7g0265971 25.123 609 400 11 59 625 178 772 1.19e-41 163
Msa0697520 MtrunA17_Chr4g0069211 27.186 629 381 18 53 636 160 756 8.38e-42 163
Msa0697520 MtrunA17_Chr4g0069211 35.749 207 126 4 53 257 840 1041 1.32e-26 116
Msa0697520 MtrunA17_Chr7g0264441 38.211 246 142 7 55 296 275 514 1.67e-40 159
Msa0697520 MtrunA17_Chr5g0429871 25.521 576 371 14 99 634 18 575 2.84e-40 159
Msa0697520 MtrunA17_Chr5g0429871 27.549 461 275 12 59 493 667 1094 1.87e-39 156
Msa0697520 MtrunA17_Chr1g0198291 26.886 517 340 16 59 560 894 1387 4.01e-40 158
Msa0697520 MtrunA17_Chr1g0198291 24.242 627 409 14 59 638 189 796 4.34e-34 140
Msa0697520 MtrunA17_Chr7g0265961 25.397 630 382 19 59 636 182 775 1.65e-39 156
Msa0697520 MtrunA17_Chr7g0265961 24.547 607 396 17 49 639 821 1381 1.87e-34 141
Msa0697520 MtrunA17_Chr7g0261981 25.359 627 401 18 58 638 161 766 3.12e-39 155
Msa0697520 MtrunA17_Chr7g0261981 24.121 597 381 17 59 639 861 1401 4.43e-35 143
Msa0697520 MtrunA17_Chr1g0180971 35.741 263 155 5 37 296 397 648 1.78e-38 152
Msa0697520 MtrunA17_Chr4g0004021 23.539 633 405 14 58 638 170 775 2.36e-35 144
Msa0697520 MtrunA17_Chr4g0004021 27.546 432 273 13 59 474 863 1270 4.18e-35 143
Msa0697520 MtrunA17_Chr4g0028621 32.955 264 161 7 37 296 491 742 9.22e-34 139
Msa0697520 MtrunA17_Chr4g0050241 32.013 303 70 7 360 662 9 175 1.58e-32 124
Msa0697520 MtrunA17_Chr3g0093331 34.597 211 131 3 79 286 18 224 1.05e-30 121
Msa0697520 MtrunA17_Chr6g0472481 31.718 227 135 5 59 270 13 234 3.27e-27 111
Msa0697520 MtrunA17_Chr7g0262321 26.066 610 359 27 36 608 540 1094 3.51e-27 118
Msa0697520 MtrunA17_Chr7g0262321 26.599 297 209 4 159 452 18 308 7.21e-18 88.6
Msa0697520 MtrunA17_Chr4g0026741 61.446 83 20 3 12 94 34 104 5.44e-22 92.4
Msa0697520 MtrunA17_Chr7g0249091 29.699 266 148 10 24 269 73 319 6.08e-16 79.7
Msa0697520 MtrunA17_Chr4g0050191 58.571 70 24 2 24 92 27 92 1.09e-15 73.6
Msa0697520 MtrunA17_Chr4g0050231 72.549 51 8 1 41 91 4 48 4.12e-14 67.4
Msa0697520 MtrunA17_Chr4g0041871 27.891 294 172 14 3 276 295 568 1.04e-13 75.1
Msa0697520 MtrunA17_Chr4g0041871 29.091 220 129 9 59 269 1023 1224 1.82e-12 70.9
Msa0697520 MtrunA17_Chr7g0215001 23.664 393 237 13 206 560 1 368 7.07e-13 70.9
Msa0697520 MtrunA17_Chr4g0061601 30.275 218 130 11 59 269 404 606 7.49e-13 71.6
Msa0697520 MtrunA17_Chr4g0047831 41.379 87 47 2 175 261 1 83 1.32e-12 64.3
Msa0697520 MtrunA17_Chr7g0227391 30.000 200 115 8 59 248 442 626 1.40e-12 70.9
Msa0697520 MtrunA17_Chr3g0132711 30.387 181 109 4 60 234 210 379 1.67e-12 70.9
Msa0697520 MtrunA17_Chr7g0257321 48.214 56 24 1 37 92 3 53 2.01e-12 62.8
Msa0697520 MtrunA17_Chr1g0178481 33.023 215 119 12 59 264 396 594 2.37e-12 70.1
Msa0697520 MtrunA17_Chr7g0257341 33.163 196 110 7 24 214 541 720 4.09e-12 70.1
Msa0697520 MtrunA17_Chr7g0257341 27.094 203 125 7 49 244 1468 1654 3.28e-11 67.0
Msa0697520 MtrunA17_Chr3g0093041 30.000 170 102 4 71 234 207 365 4.45e-12 69.3
Msa0697520 MtrunA17_Chr4g0039221 53.333 60 26 2 35 94 7 64 8.21e-12 61.2
Msa0697520 MtrunA17_Chr7g0264631 33.684 190 101 10 68 248 1107 1280 1.34e-11 68.2
Msa0697520 MtrunA17_Chr6g0452081 33.690 187 101 9 70 248 51 222 2.80e-11 63.9
Msa0697520 MtrunA17_Chr1g0180601 32.673 202 105 11 59 248 1072 1254 3.68e-11 67.0
Msa0697520 MtrunA17_Chr5g0433051 28.139 231 129 9 57 273 479 686 4.02e-11 66.2
Msa0697520 MtrunA17_Chr6g0481921 24.762 315 206 10 59 360 288 584 4.08e-11 66.6
Msa0697520 MtrunA17_Chr1g0193991 31.122 196 116 10 59 248 406 588 5.70e-11 66.2
Msa0697520 MtrunA17_Chr1g0194031 29.302 215 129 11 59 263 401 602 5.95e-11 65.9
Msa0697520 MtrunA17_Chr4g0047821 58.696 46 19 0 54 99 45 90 6.14e-11 59.3
Msa0697520 MtrunA17_Chr3g0119381 34.328 201 107 12 57 248 414 598 8.61e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0697520 AT1G17840.1 52.868 645 279 7 37 670 50 680 0.0 631
Msa0697520 AT3G21090.1 46.062 673 327 13 12 667 1 654 0.0 579
Msa0697520 AT1G51500.1 44.376 649 334 10 33 667 20 655 0.0 538
Msa0697520 AT1G51460.1 41.979 667 334 11 32 667 5 649 1.11e-172 509
Msa0697520 AT2G28070.2 36.201 616 365 10 34 639 111 708 9.97e-128 395
Msa0697520 AT2G28070.1 36.201 616 365 10 34 639 111 708 9.97e-128 395
Msa0697520 AT3G55110.1 31.434 544 351 9 49 581 81 613 2.29e-78 264
Msa0697520 AT3G55130.1 30.935 556 341 10 52 581 92 630 1.72e-77 262
Msa0697520 AT2G37360.1 31.009 545 343 9 56 581 130 660 7.08e-77 261
Msa0697520 AT2G01320.8 30.820 610 374 19 11 603 44 622 2.53e-76 257
Msa0697520 AT2G01320.5 30.820 610 374 19 11 603 44 622 2.53e-76 257
Msa0697520 AT2G13610.1 29.195 596 396 13 54 639 57 636 4.56e-76 257
Msa0697520 AT3G53510.1 32.902 541 329 9 56 581 123 644 1.05e-75 258
Msa0697520 AT2G01320.1 30.933 611 374 19 11 604 44 623 1.09e-75 258
Msa0697520 AT2G01320.4 30.933 611 374 19 11 604 44 623 1.09e-75 258
Msa0697520 AT2G01320.2 30.933 611 374 19 11 604 44 623 1.51e-75 257
Msa0697520 AT2G01320.3 30.933 611 374 19 11 604 44 623 1.52e-75 257
Msa0697520 AT3G55100.1 31.285 537 339 11 57 581 49 567 4.52e-75 254
Msa0697520 AT3G55100.2 31.285 537 339 11 57 581 49 567 4.52e-75 254
Msa0697520 AT5G13580.1 30.629 604 366 11 1 580 57 631 2.11e-74 254
Msa0697520 AT3G55090.1 29.868 606 366 14 4 580 65 640 8.29e-71 244
Msa0697520 AT5G19410.1 27.816 586 371 15 59 633 66 610 4.66e-70 240
Msa0697520 AT5G19410.2 27.816 586 371 15 59 633 75 619 5.32e-70 240
Msa0697520 AT5G06530.2 30.912 592 357 17 20 581 139 708 9.56e-69 239
Msa0697520 AT5G06530.1 30.912 592 357 17 20 581 139 708 9.56e-69 239
Msa0697520 AT5G06530.3 32.216 537 327 14 35 547 155 678 1.36e-68 238
Msa0697520 AT2G01320.7 32.317 492 293 15 11 486 44 511 2.44e-66 227
Msa0697520 AT2G01320.6 32.317 492 293 15 11 486 44 511 2.44e-66 227
Msa0697520 AT2G39350.1 30.018 553 347 11 55 580 105 644 5.04e-66 231
Msa0697520 AT1G53270.1 28.797 632 385 14 20 638 2 581 9.68e-66 228
Msa0697520 AT4G25750.1 28.547 592 361 18 59 639 30 570 3.60e-65 226
Msa0697520 AT5G52860.1 28.283 594 370 16 53 639 38 582 4.62e-63 220
Msa0697520 AT5G06530.4 32.460 496 298 14 76 547 1 483 1.12e-62 217
Msa0697520 AT1G31770.1 29.153 590 380 16 54 633 76 637 7.71e-62 218
Msa0697520 AT4G27420.1 31.275 502 319 10 55 547 62 546 2.50e-59 211
Msa0697520 AT1G71960.1 33.906 466 254 19 52 491 76 513 4.05e-58 208
Msa0697520 AT3G25620.2 29.060 585 362 20 33 590 64 622 8.36e-58 207
Msa0697520 AT4G15233.7 25.943 636 426 13 42 648 133 752 2.55e-53 199
Msa0697520 AT4G15233.7 26.541 584 377 17 23 586 768 1319 4.13e-46 177
Msa0697520 AT2G29940.1 26.970 571 366 12 31 574 813 1359 3.06e-53 199
Msa0697520 AT2G29940.1 25.352 639 401 16 58 645 174 787 2.28e-46 178
Msa0697520 AT4G15233.5 26.012 642 431 14 42 655 71 696 1.72e-52 196
Msa0697520 AT4G15233.5 26.716 539 346 16 68 586 685 1194 1.11e-42 167
Msa0697520 AT4G15233.4 26.012 642 431 14 42 655 71 696 1.72e-52 196
Msa0697520 AT4G15233.4 26.716 539 346 16 68 586 685 1194 1.11e-42 167
Msa0697520 AT4G15233.2 25.229 654 426 13 42 648 133 770 2.51e-52 196
Msa0697520 AT4G15233.2 26.471 578 369 17 23 578 786 1329 2.31e-44 172
Msa0697520 AT4G15233.1 25.229 654 426 13 42 648 133 770 2.92e-52 196
Msa0697520 AT4G15233.1 26.541 584 377 17 23 586 786 1337 4.73e-46 177
Msa0697520 AT4G15233.3 25.229 654 426 13 42 648 71 708 3.59e-52 195
Msa0697520 AT4G15233.3 26.541 584 377 17 23 586 724 1275 4.76e-46 177
Msa0697520 AT4G15233.6 25.229 654 426 13 42 648 71 708 3.59e-52 195
Msa0697520 AT4G15233.6 26.541 584 377 17 23 586 724 1275 4.76e-46 177
Msa0697520 AT3G13220.1 29.537 562 341 19 57 592 104 636 1.77e-51 190
Msa0697520 AT4G15215.11 26.047 645 409 15 42 638 131 755 3.40e-51 192
Msa0697520 AT4G15215.11 26.003 573 374 15 33 586 801 1342 3.51e-46 177
Msa0697520 AT4G15215.9 26.047 645 409 15 42 638 128 752 3.87e-51 192
Msa0697520 AT4G15215.9 26.003 573 374 15 33 586 798 1339 3.91e-46 177
Msa0697520 AT4G15215.4 26.047 645 409 15 42 638 128 752 3.87e-51 192
Msa0697520 AT4G15215.4 26.003 573 374 15 33 586 798 1339 3.91e-46 177
Msa0697520 AT4G15215.5 26.047 645 409 15 42 638 128 752 3.87e-51 192
Msa0697520 AT4G15215.5 26.003 573 374 15 33 586 798 1339 3.91e-46 177
Msa0697520 AT4G15215.3 26.047 645 409 15 42 638 128 752 3.87e-51 192
Msa0697520 AT4G15215.3 26.003 573 374 15 33 586 798 1339 3.91e-46 177
Msa0697520 AT4G15215.2 26.047 645 409 15 42 638 128 752 3.87e-51 192
Msa0697520 AT4G15215.2 26.003 573 374 15 33 586 798 1339 3.91e-46 177
Msa0697520 AT4G15215.8 26.357 645 400 16 42 638 128 745 4.22e-51 192
Msa0697520 AT4G15215.8 26.003 573 374 15 33 586 791 1332 3.59e-46 177
Msa0697520 AT4G15215.10 26.357 645 400 16 42 638 128 745 4.22e-51 192
Msa0697520 AT4G15215.10 26.003 573 374 15 33 586 791 1332 3.59e-46 177
Msa0697520 AT4G15215.6 26.357 645 400 16 42 638 128 745 4.22e-51 192
Msa0697520 AT4G15215.6 26.003 573 374 15 33 586 791 1332 3.59e-46 177
Msa0697520 AT4G15215.7 26.357 645 400 16 42 638 128 745 4.22e-51 192
Msa0697520 AT4G15215.7 26.003 573 374 15 33 586 791 1332 3.59e-46 177
Msa0697520 AT4G15215.1 26.357 645 400 16 42 638 131 748 4.81e-51 192
Msa0697520 AT4G15215.1 26.003 573 374 15 33 586 794 1335 3.80e-46 177
Msa0697520 AT2G37280.2 26.270 689 431 19 14 648 104 769 2.19e-50 190
Msa0697520 AT2G37280.2 27.586 522 330 14 33 531 809 1305 3.00e-44 171
Msa0697520 AT2G37280.1 26.270 689 431 19 14 648 104 769 2.91e-50 190
Msa0697520 AT2G37280.1 27.119 531 342 15 54 568 834 1335 7.39e-45 173
Msa0697520 AT4G15236.1 24.885 651 432 11 42 648 131 768 6.27e-50 189
Msa0697520 AT4G15236.1 26.644 593 379 18 16 586 777 1335 3.78e-47 180
Msa0697520 AT1G59870.1 27.715 534 340 14 51 568 886 1389 9.91e-50 188
Msa0697520 AT1G59870.1 25.040 631 400 16 58 638 185 792 6.33e-40 158
Msa0697520 AT3G53480.1 27.119 649 377 21 46 634 175 787 1.41e-49 187
Msa0697520 AT3G53480.1 25.243 618 388 18 15 591 816 1400 2.52e-43 169
Msa0697520 AT3G25620.1 36.086 327 188 10 33 344 64 384 2.04e-48 177
Msa0697520 AT4G15230.2 25.117 641 416 14 42 636 134 756 2.61e-48 184
Msa0697520 AT4G15230.2 26.230 549 351 17 33 557 804 1322 1.38e-43 169
Msa0697520 AT4G15230.3 25.039 643 414 14 42 636 134 756 3.77e-48 183
Msa0697520 AT4G15230.3 25.220 567 374 16 33 580 804 1339 1.36e-44 172
Msa0697520 AT4G15230.1 25.039 643 414 14 42 636 134 756 3.77e-48 183
Msa0697520 AT4G15230.1 25.220 567 374 16 33 580 804 1339 1.36e-44 172
Msa0697520 AT4G15230.4 25.039 643 414 14 42 636 55 677 3.97e-48 183
Msa0697520 AT4G15230.4 25.220 567 374 16 33 580 725 1260 1.54e-44 172
Msa0697520 AT4G15233.8 25.076 654 418 14 42 648 133 761 4.17e-48 183
Msa0697520 AT4G15233.8 26.541 584 377 17 23 586 777 1328 6.66e-46 176
Msa0697520 AT1G15210.1 26.908 524 341 13 59 568 867 1362 4.45e-48 183
Msa0697520 AT1G15210.1 24.921 634 408 16 58 644 183 795 3.89e-39 156
Msa0697520 AT3G16340.2 26.592 534 346 14 51 568 828 1331 6.20e-47 179
Msa0697520 AT3G16340.2 24.804 637 411 17 58 648 161 775 2.03e-35 144
Msa0697520 AT3G16340.1 26.592 534 346 14 51 568 833 1336 7.12e-47 179
Msa0697520 AT3G16340.1 24.686 636 418 15 58 648 161 780 1.52e-36 148
Msa0697520 AT1G15520.1 26.858 592 379 18 13 575 796 1362 9.50e-46 176
Msa0697520 AT1G15520.1 25.600 625 402 15 58 638 168 773 4.65e-44 171
Msa0697520 AT2G37280.4 26.156 627 391 16 71 648 8 611 2.24e-45 175
Msa0697520 AT2G37280.4 27.119 531 342 15 54 568 676 1177 8.30e-45 173
Msa0697520 AT2G37280.3 25.209 718 431 20 14 648 104 798 2.75e-45 175
Msa0697520 AT2G37280.3 27.119 531 342 15 54 568 863 1364 6.84e-45 173
Msa0697520 AT1G15520.2 25.160 624 406 13 58 638 168 773 5.67e-44 171
Msa0697520 AT1G15520.2 28.512 484 293 17 13 468 796 1254 8.60e-37 149
Msa0697520 AT1G53390.1 36.090 266 156 5 37 299 507 761 6.29e-42 164
Msa0697520 AT2G37010.2 35.417 288 164 7 37 321 484 752 3.15e-41 162
Msa0697520 AT2G37010.1 35.417 288 164 7 37 321 484 752 3.15e-41 162
Msa0697520 AT2G36380.1 25.714 630 396 14 59 638 188 795 4.49e-41 162
Msa0697520 AT2G36380.1 25.094 530 353 14 49 560 869 1372 1.54e-36 148
Msa0697520 AT2G26910.1 25.275 637 403 16 51 638 143 755 8.43e-40 158
Msa0697520 AT2G26910.1 24.345 534 367 10 51 567 837 1350 1.48e-38 154
Msa0697520 AT1G66950.1 25.280 625 405 12 59 638 190 797 1.06e-39 157
Msa0697520 AT1G66950.1 24.248 532 355 14 49 560 870 1373 1.38e-35 145
Msa0697520 AT3G30842.1 27.593 511 312 16 44 525 826 1307 2.55e-39 156
Msa0697520 AT3G30842.1 25.403 559 349 15 58 565 160 701 1.70e-37 150
Msa0697520 AT5G60740.1 31.939 263 165 5 37 296 499 750 5.56e-33 136
Msa0697520 AT3G21080.1 36.170 141 78 4 511 646 106 239 1.43e-16 80.5
Msa0697520 AT5G61700.2 28.641 206 121 7 54 249 610 799 4.74e-14 76.3
Msa0697520 AT5G61700.4 28.641 206 121 7 54 249 610 799 4.74e-14 76.3
Msa0697520 AT5G61700.1 29.282 181 106 6 54 224 610 778 2.98e-13 73.9
Msa0697520 AT3G47730.1 30.769 182 107 5 60 234 547 716 4.49e-13 73.2
Msa0697520 AT3G47750.1 25.269 186 124 5 54 234 630 805 2.38e-12 70.9
Msa0697520 AT4G33460.1 28.049 246 150 8 35 278 38 258 3.02e-12 68.2
Msa0697520 AT2G41700.2 32.308 195 113 7 24 214 466 645 3.04e-12 70.9
Msa0697520 AT2G41700.2 27.000 200 123 6 52 244 1424 1607 6.19e-11 66.6
Msa0697520 AT5G61690.2 29.670 182 109 5 60 234 548 717 3.16e-12 70.5
Msa0697520 AT3G47790.2 25.405 185 125 4 54 234 482 657 3.75e-12 70.1
Msa0697520 AT1G27940.1 30.256 195 119 7 59 248 388 570 3.85e-12 70.5
Msa0697520 AT2G41700.1 32.308 195 113 7 24 214 536 715 3.91e-12 70.5
Msa0697520 AT2G41700.1 27.000 200 123 6 52 244 1466 1649 6.00e-11 66.6
Msa0697520 AT3G47790.3 25.405 185 125 4 54 234 601 776 4.19e-12 70.1
Msa0697520 AT1G28010.1 30.769 195 118 8 59 248 389 571 4.34e-12 70.1
Msa0697520 AT3G47780.1 26.257 179 114 6 54 224 628 796 4.49e-12 70.1
Msa0697520 AT5G39040.1 33.149 181 104 8 56 228 410 581 4.58e-12 69.7
Msa0697520 AT1G27940.2 30.256 195 119 7 59 248 174 356 4.59e-12 70.1
Msa0697520 AT1G27940.2 29.493 217 132 9 59 269 807 1008 9.53e-11 65.9
Msa0697520 AT5G61740.3 26.190 210 135 7 13 217 427 621 5.11e-12 69.7
Msa0697520 AT1G70610.2 26.953 256 154 10 53 296 285 519 6.32e-12 68.9
Msa0697520 AT3G47790.1 25.405 185 125 4 54 234 601 776 6.62e-12 69.3
Msa0697520 AT5G61730.1 30.220 182 108 5 60 234 539 708 6.92e-12 69.3
Msa0697520 AT5G61730.2 30.220 182 108 5 60 234 549 718 7.32e-12 69.3
Msa0697520 AT5G61740.2 26.190 210 135 7 13 217 532 726 9.61e-12 68.9
Msa0697520 AT1G70610.1 26.953 256 154 10 53 296 466 700 1.03e-11 68.6
Msa0697520 AT5G61740.1 26.190 210 135 7 13 217 566 760 1.14e-11 68.9
Msa0697520 AT3G47770.1 26.404 178 115 5 54 224 599 767 2.36e-11 67.8
Msa0697520 AT4G28620.1 30.114 176 113 4 57 228 452 621 2.41e-11 67.4
Msa0697520 AT3G47770.2 26.404 178 115 5 54 224 625 793 3.01e-11 67.4
Msa0697520 AT2G47000.4 30.556 216 124 11 40 248 387 583 4.05e-11 67.0
Msa0697520 AT3G28390.1 32.020 203 117 10 70 263 375 565 4.65e-11 67.0
Msa0697520 AT3G47760.1 24.260 169 113 5 54 217 589 747 5.27e-11 66.6
Msa0697520 AT2G47000.2 30.556 216 124 11 40 248 387 583 5.28e-11 66.6
Msa0697520 AT3G28360.1 30.542 203 120 9 70 263 374 564 5.38e-11 66.6
Msa0697520 AT2G47000.3 30.556 216 124 11 40 248 387 583 5.55e-11 66.6
Msa0697520 AT2G47000.7 30.556 216 124 11 40 248 387 583 5.55e-11 66.6
Msa0697520 AT3G47760.3 24.260 169 113 5 54 217 629 787 5.89e-11 66.6
Msa0697520 AT3G47760.2 24.260 169 113 5 54 217 599 757 7.27e-11 66.2
Msa0697520 AT2G47000.6 30.556 216 124 11 40 248 387 583 7.60e-11 66.2
Msa0697520 AT2G47000.5 30.556 216 124 11 40 248 387 583 7.60e-11 66.2
Msa0697520 AT2G47000.1 30.556 216 124 11 40 248 387 583 7.60e-11 66.2
Msa0697520 AT1G10680.2 31.183 186 107 9 70 248 389 560 8.89e-11 65.9
Msa0697520 AT1G10680.1 31.183 186 107 9 70 248 389 560 9.38e-11 65.9

Find 130 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTAACTTGGAAAGATTTA+TGG 0.118017 4_4:-67552343 Msa0697520:CDS
GTCTATAGTATTGTCTTTAA+AGG 0.148699 4_4:-67549830 Msa0697520:intron
ATGATCTTCCTAATCCATTT+TGG 0.156981 4_4:-67548739 Msa0697520:CDS
GATATCAATTGCTTGTTCTA+TGG 0.227852 4_4:+67549915 None:intergenic
ATTGGAGGGTGGGGTGTTAA+AGG 0.234899 4_4:-67550926 Msa0697520:CDS
ACTGAAATCATCAGCAAATA+TGG 0.242245 4_4:+67548977 None:intergenic
AACATAGGGTATTTCCAAAA+TGG 0.259735 4_4:+67548725 None:intergenic
AGCCACTGTCTTTAATGATT+TGG 0.262428 4_4:-67549577 Msa0697520:CDS
ATTATTCCCATTAGAAAATC+AGG 0.278005 4_4:+67548821 None:intergenic
TTTAATTTCTTGGTTTCTTT+CGG 0.280423 4_4:+67549870 None:intergenic
TACCCTCCAGGTCTTCAAAA+AGG 0.282844 4_4:-67548932 Msa0697520:CDS
CTTTCAATCTCTAGGATATT+AGG 0.283672 4_4:+67552425 None:intergenic
TTTGAACGTGAAAGACTAAA+TGG 0.294897 4_4:-67549049 Msa0697520:CDS
AATAGCTTCCTTGGACAAAA+AGG 0.296864 4_4:-67550777 Msa0697520:CDS
TGCAAAGCCTGGTCAGCTTT+TGG 0.303335 4_4:-67552252 Msa0697520:CDS
AAGACAAAAGACAAAGATTA+TGG 0.307904 4_4:+67550687 None:intergenic
TGAAAGCAAATCAATTCTTC+AGG 0.309362 4_4:-67552288 Msa0697520:CDS
CTGATGATTTCAGTCATTCC+TGG 0.309905 4_4:-67548968 Msa0697520:CDS
CATGTTCACAAAAGATCTTC+TGG 0.312879 4_4:+67549662 None:intergenic
CTTAACTTGGAAAGATTTAT+GGG 0.314150 4_4:-67552342 Msa0697520:CDS
TTCGTGATCTTGGCTATTAT+TGG 0.317963 4_4:-67549638 Msa0697520:CDS
CACTGCTTCTTTAACGGTTA+AGG 0.320519 4_4:+67551060 None:intergenic
ATGGATTGAGGCAATATTAA+TGG 0.325116 4_4:+67550739 None:intergenic
TTGGCTATAATGGGTCCTTC+TGG 0.326290 4_4:-67552233 Msa0697520:CDS
AAGAATTGATTTGCTTTCAT+TGG 0.326703 4_4:+67552292 None:intergenic
TTTCTAATGGGAATAATAAC+TGG 0.328894 4_4:-67548815 Msa0697520:CDS
TAAAAGTAATGGCTCAATTC+AGG 0.332362 4_4:-67549553 Msa0697520:intron
ATAGTACACTGCTTCTTTAA+CGG 0.351217 4_4:+67551054 None:intergenic
TAGGCAAACAAGACAATTCT+TGG 0.351823 4_4:-67548423 Msa0697520:CDS
AGAAGGGAGTTTGCTTAACT+TGG 0.354423 4_4:-67552355 Msa0697520:CDS
GGGTATTTCCAAAATGGATT+AGG 0.357240 4_4:+67548731 None:intergenic
AAATTTGAAAGAGATGAAAT+TGG 0.358441 4_4:-67548641 Msa0697520:CDS
TACTCAAAGTGGGTTGATCT+TGG 0.362481 4_4:-67548551 Msa0697520:CDS
AACAAACAAGCATTGGCTTA+TGG 0.366572 4_4:-67551297 Msa0697520:CDS
TGTTCTATATTGCCTTTCAT+AGG 0.369421 4_4:-67548706 Msa0697520:CDS
GATGCAATCAACACAAGAAT+TGG 0.372547 4_4:-67550944 Msa0697520:CDS
GGTTCAAACACAAGACAATC+AGG 0.375821 4_4:-67551339 Msa0697520:CDS
TGGGGTGTTAAAGGCATAAG+TGG 0.376232 4_4:-67550917 Msa0697520:CDS
AAACTTCAGTACTAGGTTGA+TGG 0.382630 4_4:+67550720 None:intergenic
ATATGTATTTCAGGGAGATT+AGG 0.390555 4_4:-67551360 Msa0697520:intron
GGTGTTACGGCATATGTAAT+TGG 0.394392 4_4:-67549019 Msa0697520:CDS
CACCAATGGTCATGAAAGTT+AGG 0.401646 4_4:+67549405 None:intergenic
ATAACTGGTGCTGGAATTCA+AGG 0.403511 4_4:-67548800 Msa0697520:CDS
GTGAACATGTTTCGTGATCT+TGG 0.409054 4_4:-67549648 Msa0697520:CDS
TATGAAAAGAATAGCTTCCT+TGG 0.410861 4_4:-67550786 Msa0697520:CDS
TGGTGGATTCCCTTCTTATG+TGG 0.415254 4_4:-67549387 Msa0697520:CDS
GTGACTGTTTCTGCTTCAAC+AGG 0.427001 4_4:-67552320 Msa0697520:CDS
GGCTATTATTGGTTACGCCT+TGG 0.429860 4_4:-67549627 Msa0697520:CDS
AAAGAAGTCTTGGACGTGTT+AGG 0.439769 4_4:+67550858 None:intergenic
CACTTATGTCGGTGTCTCCT+AGG 0.440631 4_4:-67548442 Msa0697520:CDS
GTTGATCTTGGAATATTGTT+GGG 0.450271 4_4:-67548539 Msa0697520:CDS
GGGGTGTTAAAGGCATAAGT+GGG 0.451027 4_4:-67550916 Msa0697520:CDS
TCAGGCAAAACAGTTTACTT+TGG 0.455818 4_4:-67550665 Msa0697520:CDS
ATGGGAATAATAACTGGTGC+TGG 0.457311 4_4:-67548809 Msa0697520:CDS
GAAAGACTAAATGGACACTA+TGG 0.458475 4_4:-67549040 Msa0697520:CDS
TTCCTAACTTTCATGACCAT+TGG 0.458620 4_4:-67549407 Msa0697520:CDS
AATGATTTGGATAAAAGTAA+TGG 0.458739 4_4:-67549564 Msa0697520:CDS
GGTTGATCTTGGAATATTGT+TGG 0.459097 4_4:-67548540 Msa0697520:CDS
AAATGGATTAGGAAGATCAT+TGG 0.460933 4_4:+67548742 None:intergenic
TTGTGTCAGGTAATTGAAGT+TGG 0.471985 4_4:+67551026 None:intergenic
TCTTCATTAGACATTGTGTC+AGG 0.473825 4_4:+67551013 None:intergenic
TCAATTCTTCAGGGTCTGAC+TGG 0.475591 4_4:-67552278 Msa0697520:CDS
GAGATGGATTTAGCAGAGAC+TGG 0.477488 4_4:-67549946 Msa0697520:CDS
CTAACTTTCATGACCATTGG+TGG 0.478663 4_4:-67549404 Msa0697520:CDS
TTCATGTCCTCCACATAAGA+AGG 0.479736 4_4:+67549377 None:intergenic
ATAATGGGTCCTTCTGGTTG+TGG 0.481002 4_4:-67552227 Msa0697520:CDS
GATGAATGGAGGAGAAGAGA+AGG 0.482193 4_4:-67552372 Msa0697520:CDS
GACATAAGTGACATAACAAT+AGG 0.486627 4_4:+67548455 None:intergenic
ACCTCAGATGCAACAGAAGC+AGG 0.491002 4_4:+67550641 None:intergenic
ACCTGCTTCTGTTGCATCTG+AGG 0.494598 4_4:-67550642 Msa0697520:intron
ACACTTCTTGATGCTTTAGC+AGG 0.497837 4_4:-67552197 Msa0697520:intron
AGTACTAGGTTGATGGATTG+AGG 0.499081 4_4:+67550727 None:intergenic
CAAGGGATTATGATGTTGGC+AGG 0.499670 4_4:-67548782 Msa0697520:CDS
TGAAAGGCAATATAGAACAT+AGG 0.502086 4_4:+67548710 None:intergenic
TATTAGGCACAGATAAAAGA+AGG 0.502223 4_4:+67552441 None:intergenic
GAAAGCAAATCAATTCTTCA+GGG 0.502763 4_4:-67552287 Msa0697520:CDS
AATGGATTAGGAAGATCATT+GGG 0.503000 4_4:+67548743 None:intergenic
AAATGGACACTATGGTGTTA+CGG 0.505004 4_4:-67549032 Msa0697520:CDS
GGATCACTCAATTACATTAG+TGG 0.505948 4_4:-67548614 Msa0697520:CDS
TTCTTATGTGGAGGACATGA+AGG 0.508636 4_4:-67549375 Msa0697520:intron
AAGAATTGTCTTGTTTGCCT+AGG 0.509069 4_4:+67548425 None:intergenic
GCCATAGCATATTACCCTCC+AGG 0.509466 4_4:-67548944 Msa0697520:CDS
AATTCAAGGGATTATGATGT+TGG 0.510525 4_4:-67548786 Msa0697520:CDS
GGGTAATATGCTATGGCTCC+AGG 0.511427 4_4:+67548950 None:intergenic
CTCTTGCGCTTTCAATCTCT+AGG 0.511830 4_4:+67552417 None:intergenic
AACACAAGAATTGGAGGGTG+GGG 0.512629 4_4:-67550935 Msa0697520:CDS
GAAAGGCAATATAGAACATA+GGG 0.518508 4_4:+67548711 None:intergenic
ATGAATGGAGGAGAAGAGAA+GGG 0.524895 4_4:-67552371 Msa0697520:CDS
GAAAGAGATGAAATTGGTGG+TGG 0.530992 4_4:-67548635 Msa0697520:CDS
TGGATTCCCTTCTTATGTGG+AGG 0.531042 4_4:-67549384 Msa0697520:CDS
CAATGGCAACAAACAAGCAT+TGG 0.531389 4_4:-67551304 Msa0697520:CDS
GATTGAAAGCGCAAGAGAAG+AGG 0.532796 4_4:-67552411 Msa0697520:CDS
TTGATATGAGTTACTCAAAG+TGG 0.535183 4_4:-67548562 Msa0697520:CDS
TCTTATAAGAATGAGTTTGA+AGG 0.538328 4_4:-67548668 Msa0697520:CDS
TATACAACATCTATATGTAA+AGG 0.538931 4_4:+67548383 None:intergenic
ACCTGGAGGGTAATATGCTA+TGG 0.542119 4_4:+67548943 None:intergenic
CTGACTGGTTATGCAAAGCC+TGG 0.543693 4_4:-67552263 Msa0697520:CDS
TATTGTTATGTCACTTATGT+CGG 0.544402 4_4:-67548453 Msa0697520:CDS
GCACTATCAAGTCCACTAGT+TGG 0.553890 4_4:+67550824 None:intergenic
CCTTGGCATATATATTGCGT+TGG 0.554763 4_4:-67549610 Msa0697520:CDS
GCAATCAACACAAGAATTGG+AGG 0.560697 4_4:-67550941 Msa0697520:CDS
ATTATAGCCAAAAGCTGACC+AGG 0.561158 4_4:+67552245 None:intergenic
TGTGTCAGGTAATTGAAGTT+GGG 0.561591 4_4:+67551027 None:intergenic
ATCCAAATCATTAAAGACAG+TGG 0.564200 4_4:+67549575 None:intergenic
CAACACAAGAATTGGAGGGT+GGG 0.564826 4_4:-67550936 Msa0697520:CDS
TTTCTTGATGAACCAACTAG+TGG 0.565982 4_4:-67550836 Msa0697520:CDS
ATATGTAAAGGAGTGGCACT+AGG 0.573329 4_4:+67548395 None:intergenic
TTGAAAAGCATACCTATGAA+AGG 0.573338 4_4:+67548694 None:intergenic
TGATATGAGTTACTCAAAGT+GGG 0.574550 4_4:-67548561 Msa0697520:CDS
TTATTCCCATTAGAAAATCA+GGG 0.576168 4_4:+67548822 None:intergenic
GGGTGTTAAAGGCATAAGTG+GGG 0.578959 4_4:-67550915 Msa0697520:CDS
TTTGAAAGAGATGAAATTGG+TGG 0.584768 4_4:-67548638 Msa0697520:CDS
GAAAGCGCAAGAGAAGAGGT+AGG 0.592493 4_4:-67552407 Msa0697520:CDS
TCAATGTTAGGATATTGAGA+TGG 0.603713 4_4:-67549962 Msa0697520:intron
GTTCAAACACAAGACAATCA+GGG 0.607925 4_4:-67551338 Msa0697520:CDS
TTTGCTTAAAACTATAAACA+AGG 0.608099 4_4:-67550479 Msa0697520:CDS
AACATCTATATGTAAAGGAG+TGG 0.624574 4_4:+67548388 None:intergenic
CCAACGCAATATATATGCCA+AGG 0.625218 4_4:+67549610 None:intergenic
ATGAAGAATATGAGCTCACA+AGG 0.626092 4_4:+67549893 None:intergenic
GGGATTATGATGTTGGCAGG+TGG 0.630683 4_4:-67548779 Msa0697520:CDS
TGAGAACTAAGCACTGATTG+AGG 0.631489 4_4:+67549685 None:intergenic
TTCAAACACAAGACAATCAG+GGG 0.633055 4_4:-67551337 Msa0697520:CDS
TCATGTCCTCCACATAAGAA+GGG 0.633774 4_4:+67549378 None:intergenic
TCAACACAAGAATTGGAGGG+TGG 0.634185 4_4:-67550937 Msa0697520:CDS
AGCATTGGCTTATGGAACCT+CGG 0.634970 4_4:-67551289 Msa0697520:intron
ATTAGGCACAGATAAAAGAA+GGG 0.655682 4_4:+67552442 None:intergenic
TAACTGGTGCTGGAATTCAA+GGG 0.666097 4_4:-67548799 Msa0697520:CDS
CAATCAACACAAGAATTGGA+GGG 0.667741 4_4:-67550940 Msa0697520:CDS
ATAAGAAGGGAATCCACCAA+TGG 0.674842 4_4:+67549391 None:intergenic
GGTGTTAAAGGCATAAGTGG+GGG 0.724955 4_4:-67550914 Msa0697520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATAATATAATATTTTAAT+TGG + chr4_4:67549411-67549430 None:intergenic 0.0%
!! GATATTTATATACAAATTAT+TGG - chr4_4:67549268-67549287 Msa0697520:intron 10.0%
!!! ATTATTTTTATATGTATTTC+AGG - chr4_4:67549424-67549443 Msa0697520:CDS 10.0%
!!! TTATTTTTATATGTATTTCA+GGG - chr4_4:67549425-67549444 Msa0697520:CDS 10.0%
!! TAAAATATTAATTGAAAGAA+TGG + chr4_4:67549667-67549686 None:intergenic 10.0%
!! TATATAATTGAAAATTAACA+TGG + chr4_4:67550194-67550213 None:intergenic 10.0%
!!! TTGGATATTTTTTTATTGAT+TGG - chr4_4:67548878-67548897 Msa0697520:CDS 15.0%
!!! TTACAAATTGTTTTTATTGA+AGG + chr4_4:67549549-67549568 None:intergenic 15.0%
!! ATATCAATTGGAATAATTTA+TGG + chr4_4:67549591-67549610 None:intergenic 15.0%
!! GATTAAATATACATATCAAT+TGG + chr4_4:67549603-67549622 None:intergenic 15.0%
!! AAACAGAATTAATTACTAAA+TGG + chr4_4:67550227-67550246 None:intergenic 15.0%
!!! ATACTTCATTTTTAATTTCT+TGG + chr4_4:67550936-67550955 None:intergenic 15.0%
!!! CACTAAATTATTGTTTTATT+CGG - chr4_4:67551683-67551702 Msa0697520:intron 15.0%
!! ATATTGTTGAAATAGTATGT+TGG + chr4_4:67548702-67548721 None:intergenic 20.0%
!! GCAAATATATTAATATGCTT+AGG + chr4_4:67548768-67548787 None:intergenic 20.0%
!!! ATGGTTTCTATTTCATTTTT+TGG - chr4_4:67548859-67548878 Msa0697520:CDS 20.0%
!!! AATTTGGTTTTAAACTAAGA+AGG - chr4_4:67549070-67549089 Msa0697520:intron 20.0%
!!! ATTTGGTTTTAAACTAAGAA+GGG - chr4_4:67549071-67549090 Msa0697520:intron 20.0%
!!! TGTGTTTTTAATTCTTAAAC+AGG - chr4_4:67549168-67549187 Msa0697520:intron 20.0%
!! TATTATTTAATGTGTGTACA+TGG + chr4_4:67549242-67549261 None:intergenic 20.0%
!! TTTATATACAAATTATTGGG+TGG - chr4_4:67549272-67549291 Msa0697520:intron 20.0%
!! TTATATACAAATTATTGGGT+GGG - chr4_4:67549273-67549292 Msa0697520:intron 20.0%
!!! TTTAGATTTTATATATACCG+AGG + chr4_4:67549524-67549543 None:intergenic 20.0%
!!! TAATATTTTAATGTGATCAC+AGG - chr4_4:67549677-67549696 Msa0697520:CDS 20.0%
!!! TGATTTTACAATAAGAGAAA+TGG - chr4_4:67549818-67549837 Msa0697520:intron 20.0%
!!! GATTTTACAATAAGAGAAAT+GGG - chr4_4:67549819-67549838 Msa0697520:intron 20.0%
!!! TATAGTTTTAAGCAAATGAT+CGG + chr4_4:67550310-67550329 None:intergenic 20.0%
!! TTTGCTTAAAACTATAAACA+AGG - chr4_4:67550314-67550333 Msa0697520:intron 20.0%
!! GTTGAATCTTGAATTATTTA+AGG - chr4_4:67550638-67550657 Msa0697520:intron 20.0%
!! TTGAAATATGTTTCAATGTT+AGG - chr4_4:67550819-67550838 Msa0697520:CDS 20.0%
!!! TTTAATTTCTTGGTTTCTTT+CGG + chr4_4:67550926-67550945 None:intergenic 20.0%
!!! TAAATTTAGCTCAAATTTAG+AGG + chr4_4:67550992-67551011 None:intergenic 20.0%
!!! AATGATTTGGATAAAAGTAA+TGG - chr4_4:67551229-67551248 Msa0697520:intron 20.0%
!! GCAAATATATATTGAATGAA+TGG - chr4_4:67551480-67551499 Msa0697520:intron 20.0%
!!! CATATGCTATTAATTTGTAT+AGG - chr4_4:67551719-67551738 Msa0697520:intron 20.0%
!! AAATTTGAAAGAGATGAAAT+TGG - chr4_4:67552152-67552171 Msa0697520:intron 20.0%
!! TATACAACATCTATATGTAA+AGG + chr4_4:67552413-67552432 None:intergenic 20.0%
!!! GTACATTTAATTTTGTTTTG+TGG - chr4_4:67552437-67552456 Msa0697520:CDS 20.0%
!! CTTAACTTGGAAAGATTTAT+GGG - chr4_4:67548451-67548470 Msa0697520:CDS 25.0%
!!! AAGAATTGATTTGCTTTCAT+TGG + chr4_4:67548504-67548523 None:intergenic 25.0%
!! ATTTTGTGTATTCTTTCTCA+AGG - chr4_4:67548734-67548753 Msa0697520:CDS 25.0%
!!! AACCTTATGTTTTAAAGTTC+AGG - chr4_4:67548831-67548850 Msa0697520:CDS 25.0%
!!! ACCTTATGTTTTAAAGTTCA+GGG - chr4_4:67548832-67548851 Msa0697520:CDS 25.0%
! GAAAAACATGTGTTAATCAA+AGG + chr4_4:67548917-67548936 None:intergenic 25.0%
!! TTGATTAACACATGTTTTTC+TGG - chr4_4:67548917-67548936 Msa0697520:CDS 25.0%
! TGACAAAATTCAAATCTCTT+CGG - chr4_4:67548994-67549013 Msa0697520:CDS 25.0%
! GCTACATATTACTAGTAATT+TGG - chr4_4:67549054-67549073 Msa0697520:CDS 25.0%
!!! GTTTTTAATTCTTAAACAGG+AGG - chr4_4:67549171-67549190 Msa0697520:intron 25.0%
! AAGACAAAAGACAAAGATTA+TGG + chr4_4:67550109-67550128 None:intergenic 25.0%
! TTCAAAGCAAAAAACTACAT+TGG + chr4_4:67550255-67550274 None:intergenic 25.0%
!!! ATGTAGTTTTTTGCTTTGAA+CGG - chr4_4:67550255-67550274 Msa0697520:intron 25.0%
!!! TATAAACAAGGATTTTGATC+AGG - chr4_4:67550326-67550345 Msa0697520:intron 25.0%
! ACAAAGTTGACATAAAAACA+TGG + chr4_4:67550581-67550600 None:intergenic 25.0%
! GTCTATAGTATTGTCTTTAA+AGG - chr4_4:67550963-67550982 Msa0697520:CDS 25.0%
! ATATTGACATGAAACTTTGA+TGG - chr4_4:67551038-67551057 Msa0697520:CDS 25.0%
! TATTGACATGAAACTTTGAT+GGG - chr4_4:67551039-67551058 Msa0697520:CDS 25.0%
! AGGTCAGTTAATGTAATATA+AGG + chr4_4:67551278-67551297 None:intergenic 25.0%
!! AGTTCATAACTTTTGTGAAT+TGG - chr4_4:67551541-67551560 Msa0697520:intron 25.0%
!!! TTGTTTTATTCGGTCTTTTA+TGG - chr4_4:67551693-67551712 Msa0697520:intron 25.0%
!! ATTTTCTTGTCTAATGTTAG+TGG - chr4_4:67551917-67551936 Msa0697520:intron 25.0%
! TTATTCCCATTAGAAAATCA+GGG + chr4_4:67551974-67551993 None:intergenic 25.0%
! ATTATTCCCATTAGAAAATC+AGG + chr4_4:67551975-67551994 None:intergenic 25.0%
! TTTCTAATGGGAATAATAAC+TGG - chr4_4:67551978-67551997 Msa0697520:intron 25.0%
! TCTTATAAGAATGAGTTTGA+AGG - chr4_4:67552125-67552144 Msa0697520:intron 25.0%
!! TATTGTTATGTCACTTATGT+CGG - chr4_4:67552340-67552359 Msa0697520:CDS 25.0%
ATTAGGCACAGATAAAAGAA+GGG + chr4_4:67548354-67548373 None:intergenic 30.0%
TATTAGGCACAGATAAAAGA+AGG + chr4_4:67548355-67548374 None:intergenic 30.0%
!! CTTTCAATCTCTAGGATATT+AGG + chr4_4:67548371-67548390 None:intergenic 30.0%
! GCTTAACTTGGAAAGATTTA+TGG - chr4_4:67548450-67548469 Msa0697520:CDS 30.0%
TGAAAGCAAATCAATTCTTC+AGG - chr4_4:67548505-67548524 Msa0697520:CDS 30.0%
GAAAGCAAATCAATTCTTCA+GGG - chr4_4:67548506-67548525 Msa0697520:CDS 30.0%
TAGTTAGTTATTTGCATGCA+TGG + chr4_4:67548638-67548657 None:intergenic 30.0%
AGGAAGTTATATATAGCAGT+TGG + chr4_4:67548665-67548684 None:intergenic 30.0%
!! AAATAGTATGTTGGTGATTG+GGG + chr4_4:67548693-67548712 None:intergenic 30.0%
!! GAAATAGTATGTTGGTGATT+GGG + chr4_4:67548694-67548713 None:intergenic 30.0%
!! TGAAATAGTATGTTGGTGAT+TGG + chr4_4:67548695-67548714 None:intergenic 30.0%
AAGTCAAAACTATTTCCATG+TGG - chr4_4:67549120-67549139 Msa0697520:intron 30.0%
!!! TATTTCCATGTGGTTTTAAC+TGG - chr4_4:67549130-67549149 Msa0697520:intron 30.0%
AAAAACCAGTTAAAACCACA+TGG + chr4_4:67549138-67549157 None:intergenic 30.0%
!!! TGTGGTTTTAACTGGTTTTT+AGG - chr4_4:67549138-67549157 Msa0697520:intron 30.0%
ATATGTATTTCAGGGAGATT+AGG - chr4_4:67549433-67549452 Msa0697520:CDS 30.0%
ATAGTACACTGCTTCTTTAA+CGG + chr4_4:67549742-67549761 None:intergenic 30.0%
TCATCAAGAAAAAGAAGTCT+TGG + chr4_4:67549948-67549967 None:intergenic 30.0%
TATGAAAAGAATAGCTTCCT+TGG - chr4_4:67550007-67550026 Msa0697520:intron 30.0%
ACAAAAAGGATGGAATTCAA+AGG - chr4_4:67550030-67550049 Msa0697520:intron 30.0%
! ATGGATTGAGGCAATATTAA+TGG + chr4_4:67550057-67550076 None:intergenic 30.0%
AGTTGAAAAACTTCAGTACT+AGG + chr4_4:67550083-67550102 None:intergenic 30.0%
! AATCTTTGTCTTTTGTCTTC+AGG - chr4_4:67550110-67550129 Msa0697520:intron 30.0%
! TCCTTCTTTGTTTAGTATCA+TGG - chr4_4:67550393-67550412 Msa0697520:intron 30.0%
ACCATGATACTAAACAAAGA+AGG + chr4_4:67550397-67550416 None:intergenic 30.0%
! ATATTTCCGATTTGTATCGA+AGG + chr4_4:67550429-67550448 None:intergenic 30.0%
TGCAAAATAGATAGACACTA+GGG + chr4_4:67550486-67550505 None:intergenic 30.0%
GATTATCAGAATTCACAATG+TGG + chr4_4:67550515-67550534 None:intergenic 30.0%
ATGGTTGGATACAAAAATGT+AGG + chr4_4:67550562-67550581 None:intergenic 30.0%
AGTTGACATAAAAACATGGT+TGG + chr4_4:67550577-67550596 None:intergenic 30.0%
TCAATGTTAGGATATTGAGA+TGG - chr4_4:67550831-67550850 Msa0697520:CDS 30.0%
GATATCAATTGCTTGTTCTA+TGG + chr4_4:67550881-67550900 None:intergenic 30.0%
ACATACAAGAAAAAACATGC+TGG - chr4_4:67551082-67551101 Msa0697520:CDS 30.0%
ATCCAAATCATTAAAGACAG+TGG + chr4_4:67551221-67551240 None:intergenic 30.0%
TAAAAGTAATGGCTCAATTC+AGG - chr4_4:67551240-67551259 Msa0697520:intron 30.0%
GAAGATAGTAGCTAAACTTA+AGG + chr4_4:67551298-67551317 None:intergenic 30.0%
!!! CTAATTTTGCATGTCACTTT+TGG - chr4_4:67551317-67551336 Msa0697520:CDS 30.0%
AATCGTTCAAAATTATCCCT+CGG - chr4_4:67551589-67551608 Msa0697520:intron 30.0%
TTTGAACGTGAAAGACTAAA+TGG - chr4_4:67551744-67551763 Msa0697520:intron 30.0%
ACTGAAATCATCAGCAAATA+TGG + chr4_4:67551819-67551838 None:intergenic 30.0%
! ATTGTCCCTGATTTTCTAAT+GGG - chr4_4:67551966-67551985 Msa0697520:intron 30.0%
AATTCAAGGGATTATGATGT+TGG - chr4_4:67552007-67552026 Msa0697520:intron 30.0%
!! AATGGATTAGGAAGATCATT+GGG + chr4_4:67552053-67552072 None:intergenic 30.0%
!! AAATGGATTAGGAAGATCAT+TGG + chr4_4:67552054-67552073 None:intergenic 30.0%
! ATGATCTTCCTAATCCATTT+TGG - chr4_4:67552054-67552073 Msa0697520:intron 30.0%
! AACATAGGGTATTTCCAAAA+TGG + chr4_4:67552071-67552090 None:intergenic 30.0%
GAAAGGCAATATAGAACATA+GGG + chr4_4:67552085-67552104 None:intergenic 30.0%
TGAAAGGCAATATAGAACAT+AGG + chr4_4:67552086-67552105 None:intergenic 30.0%
TGTTCTATATTGCCTTTCAT+AGG - chr4_4:67552087-67552106 Msa0697520:intron 30.0%
! TTGAAAAGCATACCTATGAA+AGG + chr4_4:67552102-67552121 None:intergenic 30.0%
! TTTCATAGGTATGCTTTTCA+AGG - chr4_4:67552101-67552120 Msa0697520:intron 30.0%
TTTGAAAGAGATGAAATTGG+TGG - chr4_4:67552155-67552174 Msa0697520:intron 30.0%
TTGATATGAGTTACTCAAAG+TGG - chr4_4:67552231-67552250 Msa0697520:CDS 30.0%
TGATATGAGTTACTCAAAGT+GGG - chr4_4:67552232-67552251 Msa0697520:CDS 30.0%
GTTGATCTTGGAATATTGTT+GGG - chr4_4:67552254-67552273 Msa0697520:CDS 30.0%
GACATAAGTGACATAACAAT+AGG + chr4_4:67552341-67552360 None:intergenic 30.0%
AACATCTATATGTAAAGGAG+TGG + chr4_4:67552408-67552427 None:intergenic 30.0%
! GGAGCATCAAAAAAGATGAA+TGG - chr4_4:67548407-67548426 Msa0697520:CDS 35.0%
GCATCAAAAAAGATGAATGG+AGG - chr4_4:67548410-67548429 Msa0697520:CDS 35.0%
!! AATAGTATGTTGGTGATTGG+GGG + chr4_4:67548692-67548711 None:intergenic 35.0%
!! GCCCTGAACTTTAAAACATA+AGG + chr4_4:67548836-67548855 None:intergenic 35.0%
ATGAAACAAAGCACAATCTG+TGG - chr4_4:67549306-67549325 Msa0697520:intron 35.0%
GTTCAAACACAAGACAATCA+GGG - chr4_4:67549455-67549474 Msa0697520:intron 35.0%
TTCAAACACAAGACAATCAG+GGG - chr4_4:67549456-67549475 Msa0697520:intron 35.0%
!!! TCAGGGGATATTTTGATCAA+TGG - chr4_4:67549472-67549491 Msa0697520:intron 35.0%
!! AACAAACAAGCATTGGCTTA+TGG - chr4_4:67549496-67549515 Msa0697520:intron 35.0%
TGTGTCAGGTAATTGAAGTT+GGG + chr4_4:67549769-67549788 None:intergenic 35.0%
TTGTGTCAGGTAATTGAAGT+TGG + chr4_4:67549770-67549789 None:intergenic 35.0%
TCTTCATTAGACATTGTGTC+AGG + chr4_4:67549783-67549802 None:intergenic 35.0%
GATGCAATCAACACAAGAAT+TGG - chr4_4:67549849-67549868 Msa0697520:CDS 35.0%
CAATCAACACAAGAATTGGA+GGG - chr4_4:67549853-67549872 Msa0697520:CDS 35.0%
TTTCTTGATGAACCAACTAG+TGG - chr4_4:67549957-67549976 Msa0697520:intron 35.0%
AATAGCTTCCTTGGACAAAA+AGG - chr4_4:67550016-67550035 Msa0697520:intron 35.0%
! AATTCCATCCTTTTTGTCCA+AGG + chr4_4:67550027-67550046 None:intergenic 35.0%
! AAACTTCAGTACTAGGTTGA+TGG + chr4_4:67550076-67550095 None:intergenic 35.0%
TCAGGCAAAACAGTTTACTT+TGG - chr4_4:67550128-67550147 Msa0697520:intron 35.0%
!! ATGATCGGATGGATTTTGTA+GGG + chr4_4:67550295-67550314 None:intergenic 35.0%
!! AATGATCGGATGGATTTTGT+AGG + chr4_4:67550296-67550315 None:intergenic 35.0%
!! GTTTTAAGCAAATGATCGGA+TGG + chr4_4:67550306-67550325 None:intergenic 35.0%
CAGTATCCTTCGATACAAAT+CGG - chr4_4:67550420-67550439 Msa0697520:intron 35.0%
GTGCAAAATAGATAGACACT+AGG + chr4_4:67550487-67550506 None:intergenic 35.0%
ATGAAGAATATGAGCTCACA+AGG + chr4_4:67550903-67550922 None:intergenic 35.0%
!! GAAACTTTGATGGGTGTTTT+AGG - chr4_4:67551048-67551067 Msa0697520:CDS 35.0%
CATGTTCACAAAAGATCTTC+TGG + chr4_4:67551134-67551153 None:intergenic 35.0%
TTCGTGATCTTGGCTATTAT+TGG - chr4_4:67551155-67551174 Msa0697520:intron 35.0%
AGCCACTGTCTTTAATGATT+TGG - chr4_4:67551216-67551235 Msa0697520:intron 35.0%
!!! CACTTTTGGTTTTCCTTTTC+AGG - chr4_4:67551331-67551350 Msa0697520:CDS 35.0%
TTCCTAACTTTCATGACCAT+TGG - chr4_4:67551386-67551405 Msa0697520:intron 35.0%
ATTCTCGAAGTTGTTAGCAT+CGG - chr4_4:67551511-67551530 Msa0697520:intron 35.0%
GAAAGACTAAATGGACACTA+TGG - chr4_4:67551753-67551772 Msa0697520:intron 35.0%
! AAATGGACACTATGGTGTTA+CGG - chr4_4:67551761-67551780 Msa0697520:intron 35.0%
!! TCAAATCCTTTTTGAAGACC+TGG + chr4_4:67551870-67551889 None:intergenic 35.0%
! CATTGTCCCTGATTTTCTAA+TGG - chr4_4:67551965-67551984 Msa0697520:intron 35.0%
! GGGTATTTCCAAAATGGATT+AGG + chr4_4:67552065-67552084 None:intergenic 35.0%
GGATCACTCAATTACATTAG+TGG - chr4_4:67552179-67552198 Msa0697520:intron 35.0%
GGTTGATCTTGGAATATTGT+TGG - chr4_4:67552253-67552272 Msa0697520:CDS 35.0%
!! AAGAATTGTCTTGTTTGCCT+AGG + chr4_4:67552371-67552390 None:intergenic 35.0%
TAGGCAAACAAGACAATTCT+TGG - chr4_4:67552370-67552389 Msa0697520:CDS 35.0%
ATGAATGGAGGAGAAGAGAA+GGG - chr4_4:67548422-67548441 Msa0697520:CDS 40.0%
! AGAAGGGAGTTTGCTTAACT+TGG - chr4_4:67548438-67548457 Msa0697520:CDS 40.0%
ATTATAGCCAAAAGCTGACC+AGG + chr4_4:67548551-67548570 None:intergenic 40.0%
!! TGGTCAGCTTTTGGCTATAA+TGG - chr4_4:67548550-67548569 Msa0697520:CDS 40.0%
!! GGTCAGCTTTTGGCTATAAT+GGG - chr4_4:67548551-67548570 Msa0697520:CDS 40.0%
! GTAGATTTTCCACAACCAGA+AGG + chr4_4:67548578-67548597 None:intergenic 40.0%
ACACTTCTTGATGCTTTAGC+AGG - chr4_4:67548596-67548615 Msa0697520:CDS 40.0%
!!! TTTTAAAGTTCAGGGCTCGA+TGG - chr4_4:67548840-67548859 Msa0697520:CDS 40.0%
GGTTCAAAGACTACATGCAT+TGG + chr4_4:67549390-67549409 None:intergenic 40.0%
GGTTCAAACACAAGACAATC+AGG - chr4_4:67549454-67549473 Msa0697520:intron 40.0%
CAATGGCAACAAACAAGCAT+TGG - chr4_4:67549489-67549508 Msa0697520:intron 40.0%
CACTGCTTCTTTAACGGTTA+AGG + chr4_4:67549736-67549755 None:intergenic 40.0%
GCAATCAACACAAGAATTGG+AGG - chr4_4:67549852-67549871 Msa0697520:CDS 40.0%
AAAGAAGTCTTGGACGTGTT+AGG + chr4_4:67549938-67549957 None:intergenic 40.0%
!! AGTACTAGGTTGATGGATTG+AGG + chr4_4:67550069-67550088 None:intergenic 40.0%
!! TGATCGGATGGATTTTGTAG+GGG + chr4_4:67550294-67550313 None:intergenic 40.0%
!! TGAGAACTAAGCACTGATTG+AGG + chr4_4:67551111-67551130 None:intergenic 40.0%
GTGAACATGTTTCGTGATCT+TGG - chr4_4:67551145-67551164 Msa0697520:intron 40.0%
CCAACGCAATATATATGCCA+AGG + chr4_4:67551186-67551205 None:intergenic 40.0%
CCTTGGCATATATATTGCGT+TGG - chr4_4:67551183-67551202 Msa0697520:intron 40.0%
!! GGTTTTCCTTTTCAGGATAG+AGG - chr4_4:67551338-67551357 Msa0697520:CDS 40.0%
AGTGAACCTCTATCCTGAAA+AGG + chr4_4:67551347-67551366 None:intergenic 40.0%
CACCAATGGTCATGAAAGTT+AGG + chr4_4:67551391-67551410 None:intergenic 40.0%
CTAACTTTCATGACCATTGG+TGG - chr4_4:67551389-67551408 Msa0697520:intron 40.0%
ATAAGAAGGGAATCCACCAA+TGG + chr4_4:67551405-67551424 None:intergenic 40.0%
TCATGTCCTCCACATAAGAA+GGG + chr4_4:67551418-67551437 None:intergenic 40.0%
TTCATGTCCTCCACATAAGA+AGG + chr4_4:67551419-67551438 None:intergenic 40.0%
TTCTTATGTGGAGGACATGA+AGG - chr4_4:67551418-67551437 Msa0697520:intron 40.0%
! GGTGTTACGGCATATGTAAT+TGG - chr4_4:67551774-67551793 Msa0697520:intron 40.0%
CTGATGATTTCAGTCATTCC+TGG - chr4_4:67551825-67551844 Msa0697520:intron 40.0%
!! ATCCTTTTTGAAGACCTGGA+GGG + chr4_4:67551866-67551885 None:intergenic 40.0%
!! AATCCTTTTTGAAGACCTGG+AGG + chr4_4:67551867-67551886 None:intergenic 40.0%
ATGGGAATAATAACTGGTGC+TGG - chr4_4:67551984-67552003 Msa0697520:intron 40.0%
! ATAACTGGTGCTGGAATTCA+AGG - chr4_4:67551993-67552012 Msa0697520:intron 40.0%
! TAACTGGTGCTGGAATTCAA+GGG - chr4_4:67551994-67552013 Msa0697520:intron 40.0%
GAAAGAGATGAAATTGGTGG+TGG - chr4_4:67552158-67552177 Msa0697520:intron 40.0%
!! TACTCAAAGTGGGTTGATCT+TGG - chr4_4:67552242-67552261 Msa0697520:CDS 40.0%
ATATGTAAAGGAGTGGCACT+AGG + chr4_4:67552401-67552420 None:intergenic 40.0%
CTCTTGCGCTTTCAATCTCT+AGG + chr4_4:67548379-67548398 None:intergenic 45.0%
! GATTGAAAGCGCAAGAGAAG+AGG - chr4_4:67548382-67548401 Msa0697520:CDS 45.0%
GATGAATGGAGGAGAAGAGA+AGG - chr4_4:67548421-67548440 Msa0697520:CDS 45.0%
!! GTGACTGTTTCTGCTTCAAC+AGG - chr4_4:67548473-67548492 Msa0697520:CDS 45.0%
TCAATTCTTCAGGGTCTGAC+TGG - chr4_4:67548515-67548534 Msa0697520:CDS 45.0%
!! TTGGCTATAATGGGTCCTTC+TGG - chr4_4:67548560-67548579 Msa0697520:CDS 45.0%
!! ATAATGGGTCCTTCTGGTTG+TGG - chr4_4:67548566-67548585 Msa0697520:CDS 45.0%
!! TGTTGGTGATTGGGGGATTT+AGG + chr4_4:67548685-67548704 None:intergenic 45.0%
!! AGCATTGGCTTATGGAACCT+CGG - chr4_4:67549504-67549523 Msa0697520:intron 45.0%
TCAACACAAGAATTGGAGGG+TGG - chr4_4:67549856-67549875 Msa0697520:CDS 45.0%
CAACACAAGAATTGGAGGGT+GGG - chr4_4:67549857-67549876 Msa0697520:CDS 45.0%
AACACAAGAATTGGAGGGTG+GGG - chr4_4:67549858-67549877 Msa0697520:CDS 45.0%
! TGGGGTGTTAAAGGCATAAG+TGG - chr4_4:67549876-67549895 Msa0697520:CDS 45.0%
! GGGGTGTTAAAGGCATAAGT+GGG - chr4_4:67549877-67549896 Msa0697520:CDS 45.0%
! GGGTGTTAAAGGCATAAGTG+GGG - chr4_4:67549878-67549897 Msa0697520:CDS 45.0%
! GGTGTTAAAGGCATAAGTGG+GGG - chr4_4:67549879-67549898 Msa0697520:CDS 45.0%
GCATAAGTGGGGGTCAAAAA+AGG - chr4_4:67549889-67549908 Msa0697520:CDS 45.0%
GCACTATCAAGTCCACTAGT+TGG + chr4_4:67549972-67549991 None:intergenic 45.0%
GCTTCCTTGGACAAAAAGGA+TGG - chr4_4:67550020-67550039 Msa0697520:intron 45.0%
! CTTCTGTTGCATCTGAGGTT+AGG - chr4_4:67550156-67550175 Msa0697520:intron 45.0%
! GAGATGGATTTAGCAGAGAC+TGG - chr4_4:67550847-67550866 Msa0697520:CDS 45.0%
! GGCTATTATTGGTTACGCCT+TGG - chr4_4:67551166-67551185 Msa0697520:intron 45.0%
!! TGGTGGATTCCCTTCTTATG+TGG - chr4_4:67551406-67551425 Msa0697520:intron 45.0%
TGGATTCCCTTCTTATGTGG+AGG - chr4_4:67551409-67551428 Msa0697520:intron 45.0%
TAATGACGAACGTTCACCGA+GGG + chr4_4:67551608-67551627 None:intergenic 45.0%
ACCTGGAGGGTAATATGCTA+TGG + chr4_4:67551853-67551872 None:intergenic 45.0%
TACCCTCCAGGTCTTCAAAA+AGG - chr4_4:67551861-67551880 Msa0697520:intron 45.0%
CAAGGGATTATGATGTTGGC+AGG - chr4_4:67552011-67552030 Msa0697520:intron 45.0%
!! ATATTTATATACAAATTATT+GGG - chr4_4:67549269-67549288 Msa0697520:intron 5.0%
! GAAAGCGCAAGAGAAGAGGT+AGG - chr4_4:67548386-67548405 Msa0697520:CDS 50.0%
! CTGACTGGTTATGCAAAGCC+TGG - chr4_4:67548530-67548549 Msa0697520:CDS 50.0%
! TGCAAAGCCTGGTCAGCTTT+TGG - chr4_4:67548541-67548560 Msa0697520:CDS 50.0%
CAAAGCACAATCTGTGGCAG+CGG - chr4_4:67549312-67549331 Msa0697520:intron 50.0%
AAAGCACAATCTGTGGCAGC+GGG - chr4_4:67549313-67549332 Msa0697520:intron 50.0%
! ATTGGAGGGTGGGGTGTTAA+AGG - chr4_4:67549867-67549886 Msa0697520:CDS 50.0%
ACCTGCTTCTGTTGCATCTG+AGG - chr4_4:67550151-67550170 Msa0697520:intron 50.0%
ACCTCAGATGCAACAGAAGC+AGG + chr4_4:67550155-67550174 None:intergenic 50.0%
! GGATTTTGTAGGGGAGGACA+AGG + chr4_4:67550285-67550304 None:intergenic 50.0%
!! TCGGATGGATTTTGTAGGGG+AGG + chr4_4:67550291-67550310 None:intergenic 50.0%
CTAATGACGAACGTTCACCG+AGG + chr4_4:67551609-67551628 None:intergenic 50.0%
GGGTAATATGCTATGGCTCC+AGG + chr4_4:67551846-67551865 None:intergenic 50.0%
GCCATAGCATATTACCCTCC+AGG - chr4_4:67551849-67551868 Msa0697520:intron 50.0%
GGGATTATGATGTTGGCAGG+TGG - chr4_4:67552014-67552033 Msa0697520:intron 50.0%
! CACTTATGTCGGTGTCTCCT+AGG - chr4_4:67552351-67552370 Msa0697520:CDS 50.0%
AAGCACAATCTGTGGCAGCG+GGG - chr4_4:67549314-67549333 Msa0697520:intron 55.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 67548344 67552471 67548344 ID=Msa0697520;Name=Msa0697520
chr4_4 mRNA 67548344 67552471 67548344 ID=Msa0697520-mRNA-1;Parent=Msa0697520;Name=Msa0697520-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|1|0.75|1|1|1|8|38|676
chr4_4 exon 67548344 67549074 67548344 ID=Msa0697520-mRNA-1:exon:19914;Parent=Msa0697520-mRNA-1
chr4_4 exon 67549376 67549462 67549376 ID=Msa0697520-mRNA-1:exon:19913;Parent=Msa0697520-mRNA-1
chr4_4 exon 67549554 67549745 67549554 ID=Msa0697520-mRNA-1:exon:19912;Parent=Msa0697520-mRNA-1
chr4_4 exon 67549831 67549974 67549831 ID=Msa0697520-mRNA-1:exon:19911;Parent=Msa0697520-mRNA-1
chr4_4 exon 67550468 67550554 67550468 ID=Msa0697520-mRNA-1:exon:19910;Parent=Msa0697520-mRNA-1
chr4_4 exon 67550643 67551116 67550643 ID=Msa0697520-mRNA-1:exon:19909;Parent=Msa0697520-mRNA-1
chr4_4 exon 67551290 67551369 67551290 ID=Msa0697520-mRNA-1:exon:19908;Parent=Msa0697520-mRNA-1
chr4_4 exon 67552198 67552471 67552198 ID=Msa0697520-mRNA-1:exon:19907;Parent=Msa0697520-mRNA-1
chr4_4 CDS 67552198 67552471 67552198 ID=Msa0697520-mRNA-1:cds;Parent=Msa0697520-mRNA-1
chr4_4 CDS 67551290 67551369 67551290 ID=Msa0697520-mRNA-1:cds;Parent=Msa0697520-mRNA-1
chr4_4 CDS 67550643 67551116 67550643 ID=Msa0697520-mRNA-1:cds;Parent=Msa0697520-mRNA-1
chr4_4 CDS 67550468 67550554 67550468 ID=Msa0697520-mRNA-1:cds;Parent=Msa0697520-mRNA-1
chr4_4 CDS 67549831 67549974 67549831 ID=Msa0697520-mRNA-1:cds;Parent=Msa0697520-mRNA-1
chr4_4 CDS 67549554 67549745 67549554 ID=Msa0697520-mRNA-1:cds;Parent=Msa0697520-mRNA-1
chr4_4 CDS 67549376 67549462 67549376 ID=Msa0697520-mRNA-1:cds;Parent=Msa0697520-mRNA-1
chr4_4 CDS 67548382 67549074 67548382 ID=Msa0697520-mRNA-1:cds;Parent=Msa0697520-mRNA-1
chr4_4 three_prime_UTR 67548344 67548381 67548344 ID=Msa0697520-mRNA-1:three_prime_utr;Parent=Msa0697520-mRNA-1
Gene Sequence

>Msa0697520

ATGGCTTCCCTTCTTTTATCTGTGCCTAATATCCTAGAGATTGAAAGCGCAAGAGAAGAGGTAGGAGCATCAAAAAAGATGAATGGAGGAGAAGAGAAGGGAGTTTGCTTAACTTGGAAAGATTTATGGGTGACTGTTTCTGCTTCAACAGGAAAAACCAATGAAAGCAAATCAATTCTTCAGGGTCTGACTGGTTATGCAAAGCCTGGTCAGCTTTTGGCTATAATGGGTCCTTCTGGTTGTGGAAAATCTACACTTCTTGATGCTTTAGCAGGGAGATTAGGTTCAAACACAAGACAATCAGGGGATATTTTGATCAATGGCAACAAACAAGCATTGGCTTATGGAACCTCGGCATATGTCACACAAGATGATACTTTATTAACAACCTTAACCGTTAAAGAAGCAGTGTACTATTCAGCCCAACTTCAATTACCTGACACAATGTCTAATGAAGAGAAAAAAGAGAGAGCTGATTTTACAATAAGAGAAATGGGTCTGCAAGATGCAATCAACACAAGAATTGGAGGGTGGGGTGTTAAAGGCATAAGTGGGGGTCAAAAAAGGAGAGTCAGCATTTGCATTGAGATCCTAACACGTCCAAGACTTCTTTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCTTACTATGTTATGAAAAGAATAGCTTCCTTGGACAAAAAGGATGGAATTCAAAGGACCATTAATATTGCCTCAATCCATCAACCTAGTACTGAAGTTTTTCAACTTTTCCATAATCTTTGTCTTTTGTCTTCAGGCAAAACAGTTTACTTTGGACCTGCTTCTGTTGCATCTGAGTTTTTTGCTTTGAACGGATTTCCTTGTCCTCCCCTACAAAATCCATCCGATCATTTGCTTAAAACTATAAACAAGGATTTTGATCAGGATATTGAGATGGATTTAGCAGAGACTGGAACAATTTCCATAGAACAAGCAATTGATATCCTTGTGAGCTCATATTCTTCATCCGAAAGAAACCAAGAAATTAAAAATGAAGTATCAATATTGTCTATAGTATTGTCTTTAAAGGATAATAATTCAACATACAAGAAAAAACATGCTGGCTTCCTCAATCAGTGCTTAGTTCTCACCAGAAGATCTTTTGTGAACATGTTTCGTGATCTTGGCTATTATTGGTTACGCCTTGGCATATATATTGCGTTGGCTATAAGTTTAGCCACTGTCTTTAATGATTTGGATAAAAGTAATGGCTCAATTCAGGATAGAGGTTCACTTCTTATGTTTGTGTTTTCATTCCTAACTTTCATGACCATTGGTGGATTCCCTTCTTATGTGGAGGACATGAAGGTATTTGAACGTGAAAGACTAAATGGACACTATGGTGTTACGGCATATGTAATTGGAAACACACTTTCAGCTATTCCATATTTGCTGATGATTTCAGTCATTCCTGGAGCCATAGCATATTACCCTCCAGGTCTTCAAAAAGGATTTGAGCACTTCATATATTTTATCTGTGCTCTATTTTCTTGTCTAATGTTAGTGGAGAGTCTTATGATGATAGTTGCTAGCATTGTCCCTGATTTTCTAATGGGAATAATAACTGGTGCTGGAATTCAAGGGATTATGATGTTGGCAGGTGGATTCTTTAGATTGCCCAATGATCTTCCTAATCCATTTTGGAAATACCCTATGTTCTATATTGCCTTTCATAGGTATGCTTTTCAAGGATCTTATAAGAATGAGTTTGAAGGACTAAAATTTGAAAGAGATGAAATTGGTGGTGGATCACTCAATTACATTAGTGGTGAAGAGATTCTAAGAAATAAATTTCAAGTTGATATGAGTTACTCAAAGTGGGTTGATCTTGGAATATTGTTGGGTATGATTGTTCTATATCGACTTGTGTTTTTGATTATTATCAAAACTACTGAGAAGCTTAAACCTATTGTTATGTCACTTATGTCGGTGTCTCCTAGGCAAACAAGACAATTCTTGGAGAATCCTAGTGCCACTCCTTTACATATAGATGTTGTATAA
Protein sequence

>Msa0697520

MASLLLSVPNILEIESAREEVGASKKMNGGEEKGVCLTWKDLWVTVSASTGKTNESKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSNTRQSGDILINGNKQALAYGTSAYVTQDDTLLTTLTVKEAVYYSAQLQLPDTMSNEEKKERADFTIREMGLQDAINTRIGGWGVKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIASLDKKDGIQRTINIASIHQPSTEVFQLFHNLCLLSSGKTVYFGPASVASEFFALNGFPCPPLQNPSDHLLKTINKDFDQDIEMDLAETGTISIEQAIDILVSSYSSSERNQEIKNEVSILSIVLSLKDNNSTYKKKHAGFLNQCLVLTRRSFVNMFRDLGYYWLRLGIYIALAISLATVFNDLDKSNGSIQDRGSLLMFVFSFLTFMTIGGFPSYVEDMKVFERERLNGHYGVTAYVIGNTLSAIPYLLMISVIPGAIAYYPPGLQKGFEHFIYFICALFSCLMLVESLMMIVASIVPDFLMGIITGAGIQGIMMLAGGFFRLPNDLPNPFWKYPMFYIAFHRYAFQGSYKNEFEGLKFERDEIGGGSLNYISGEEILRNKFQVDMSYSKWVDLGILLGMIVLYRLVFLIIIKTTEKLKPIVMSLMSVSPRQTRQFLENPSATPLHIDVV*