AlfalfaGEDB | Msa0278930

M. sativa cultivar zhongmu-4 / Msa0278930

KEGG: K00430
GO: GO:0000902 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004601 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0006950 GO:0006952 GO:0006970 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009505 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009826 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010043 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016209 GO:0016491 GO:0016684 GO:0030312 GO:0031090 GO:0031347 GO:0031349 GO:0032502 GO:0032989 GO:0035821 GO:0040007 GO:0040008 GO:0042221 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044003 GO:0044237 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045088 GO:0045089 GO:0045926 GO:0048046 GO:0048518 GO:0048519 GO:0048583 GO:0048584 GO:0048589 GO:0048856 GO:0048869 GO:0050776 GO:0050778 GO:0050789 GO:0050832 GO:0050896 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052031 GO:0052033 GO:0052166 GO:0052167 GO:0052169 GO:0052173 GO:0052200 GO:0052255 GO:0052257 GO:0052305 GO:0052306 GO:0052308 GO:0052509 GO:0052510 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052564 GO:0052572 GO:0055114 GO:0060560 GO:0065007 GO:0070887 GO:0071840 GO:0071944 GO:0072593 GO:0075136 GO:0080134 GO:0097237 GO:0098542 GO:0098588 GO:0098754 GO:0098805 GO:0098869 GO:1990748
PFAM: PF00141.26

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0278930	XP_003594502.1	83.286	353	58	1	1	352	1	353	0.0	594

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0278930	sp\|Q9LEH3\|PER15_IPOBA	60.127	316	123	2	15	327	8	323	3.81e-126	368

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0278930	G7IJV0	83.286	353	58	1	1	352	1	353	0.0	594

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0016040	Msa0278930	0.806798	6.905415e-50	-8.615850e-47
Msa0077560	Msa0278930	0.815371	9.569515e-52	-8.615850e-47
Msa0278930	Msa0373500	0.800301	1.536924e-48	-8.615850e-47
Msa0278930	Msa0481890	0.801198	1.008297e-48	-8.615850e-47
Msa0278930	Msa0531960	0.807705	4.437174e-50	-8.615850e-47
Msa0278930	Msa0666700	0.805971	1.031682e-49	-8.615850e-47
Msa0278930	Msa0703600	0.805849	1.094135e-49	-8.615850e-47
Msa0278930	Msa0709200	0.806687	7.286906e-50	-8.615850e-47
Msa0278930	Msa0709440	0.803090	4.115666e-49	-8.615850e-47
Msa0278930	Msa0716480	0.807470	4.976306e-50	-8.615850e-47
Msa0278930	Msa0735780	0.803479	3.417699e-49	-8.615850e-47
Msa0278930	Msa0740710	0.812791	3.548380e-51	-8.615850e-47
Msa0278930	Msa0780910	0.803233	3.843560e-49	-8.615850e-47
Msa0278930	Msa0837460	0.809194	2.134581e-50	-8.615850e-47
Msa0278930	Msa0997920	0.803488	3.403257e-49	-8.615850e-47
Msa0278930	Msa1084530	0.801992	6.929350e-49	-8.615850e-47
Msa0278930	Msa1125820	0.806827	6.807029e-50	-8.615850e-47
Msa0278930	Msa1125990	0.808588	2.876919e-50	-8.615850e-47
Msa0278930	Msa1263780	0.810799	9.630015e-51	-8.615850e-47
Msa0278930	Msa1387440	0.811069	8.415972e-51	-8.615850e-47
Msa0278930	Msa1450190	0.804456	2.141843e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0278930	MtrunA17_Chr2g0292291	83.286	353	58	1	1	352	1	353	0.0	594
Msa0278930	MtrunA17_Chr2g0292261	78.857	350	73	1	4	352	3	352	0.0	555
Msa0278930	MtrunA17_Chr2g0292271	73.066	349	90	3	7	352	6	353	3.15e-180	503
Msa0278930	MtrunA17_Chr2g0292241	67.978	356	109	2	1	352	1	355	1.32e-179	501
Msa0278930	MtrunA17_Chr2g0292181	68.946	351	107	1	4	352	12	362	2.37e-178	498
Msa0278930	MtrunA17_Chr2g0292211	66.006	353	118	2	1	352	12	363	3.75e-170	478
Msa0278930	MtrunA17_Chr2g0292111	64.773	352	120	1	4	351	3	354	1.60e-164	463
Msa0278930	MtrunA17_Chr2g0292251	68.168	333	101	2	23	350	21	353	2.44e-163	460
Msa0278930	MtrunA17_Chr2g0291751	63.636	352	124	1	4	351	3	354	4.45e-163	459
Msa0278930	MtrunA17_Chr2g0292151	64.023	353	122	2	4	352	3	354	6.16e-161	454
Msa0278930	MtrunA17_Chr2g0292091	59.312	349	135	2	4	352	3	344	3.33e-146	416
Msa0278930	MtrunA17_Chr2g0292101	58.286	350	138	3	4	352	3	345	4.41e-139	398
Msa0278930	MtrunA17_Chr2g0292281	78.423	241	40	3	112	352	9	237	3.19e-130	372
Msa0278930	MtrunA17_Chr7g0258811	59.935	307	122	1	26	331	65	371	4.29e-127	369
Msa0278930	MtrunA17_Chr1g0175561	59.223	309	125	1	24	331	18	326	2.34e-125	363
Msa0278930	MtrunA17_Chr8g0372601	50.495	303	149	1	30	332	30	331	7.22e-105	311
Msa0278930	MtrunA17_Chr4g0070951	49.107	336	161	4	1	332	1	330	3.37e-102	304
Msa0278930	MtrunA17_Chr5g0404721	49.669	302	151	1	30	331	30	330	1.74e-101	302
Msa0278930	MtrunA17_Chr2g0299691	48.534	307	153	2	29	332	55	359	3.31e-97	292
Msa0278930	MtrunA17_Chr1g0155611	48.344	302	156	0	30	331	46	347	2.14e-96	290
Msa0278930	MtrunA17_Chr4g0013201	46.602	309	156	2	23	331	39	338	8.55e-96	288
Msa0278930	MtrunA17_Chr2g0320071	44.444	324	171	2	8	331	3	317	4.13e-95	285
Msa0278930	MtrunA17_Chr2g0320091	46.753	308	154	3	25	331	20	318	7.26e-95	285
Msa0278930	MtrunA17_Chr2g0320101	46.580	307	155	2	25	331	20	317	1.10e-94	284
Msa0278930	MtrunA17_Chr7g0244461	45.312	320	158	3	12	331	10	312	1.43e-94	284
Msa0278930	MtrunA17_Chr3g0129051	46.605	324	158	4	6	327	8	318	3.90e-94	283
Msa0278930	MtrunA17_Chr4g0038171	45.808	334	161	4	1	331	5	321	6.37e-94	283
Msa0278930	MtrunA17_Chr4g0043391	48.052	308	150	3	27	331	24	324	8.34e-94	282
Msa0278930	MtrunA17_Chr5g0402571	48.366	306	152	4	28	331	25	326	1.94e-93	281
Msa0278930	MtrunA17_Chr3g0114451	47.059	306	153	2	26	331	22	318	2.82e-93	281
Msa0278930	MtrunA17_Chr3g0106921	45.679	324	160	5	11	331	10	320	7.03e-93	280
Msa0278930	MtrunA17_Chr5g0402581	46.885	305	158	3	28	331	25	326	1.14e-92	280
Msa0278930	MtrunA17_Chr2g0320051	44.136	324	173	2	8	331	3	318	3.43e-92	278
Msa0278930	MtrunA17_Chr4g0013171	45.912	318	161	4	16	331	13	321	1.17e-91	277
Msa0278930	MtrunA17_Chr4g0013181	49.502	301	141	4	33	331	62	353	1.41e-91	278
Msa0278930	MtrunA17_Chr2g0320061	43.827	324	174	2	8	331	3	318	1.64e-91	276
Msa0278930	MtrunA17_Chr4g0013191	45.779	308	155	4	27	331	42	340	2.16e-91	277
Msa0278930	MtrunA17_Chr4g0038151	45.509	334	162	5	1	331	5	321	6.15e-91	275
Msa0278930	MtrunA17_Chr7g0244451	47.697	304	150	2	28	331	22	316	8.83e-91	274
Msa0278930	MtrunA17_Chr4g0038161	46.708	319	156	4	16	331	13	320	5.11e-90	273
Msa0278930	MtrunA17_Chr3g0107881	46.602	309	155	3	26	331	23	324	2.54e-89	271
Msa0278930	MtrunA17_Chr2g0320031	45.246	305	159	2	27	331	23	319	2.90e-89	271
Msa0278930	MtrunA17_Chr5g0400331	45.545	303	161	2	33	331	29	331	2.04e-88	269
Msa0278930	MtrunA17_Chr5g0432341	45.631	309	157	4	28	333	23	323	2.20e-88	268
Msa0278930	MtrunA17_Chr5g0432351	44.311	334	170	5	1	331	1	321	3.18e-88	268
Msa0278930	MtrunA17_Chr5g0432441	43.323	337	169	6	3	331	4	326	2.84e-87	266
Msa0278930	MtrunA17_Chr4g0068621	42.715	302	170	2	30	331	38	336	6.25e-87	265
Msa0278930	MtrunA17_Chr5g0432331	45.631	309	157	4	28	333	54	354	1.56e-86	265
Msa0278930	MtrunA17_Chr3g0129041	45.897	329	161	5	6	331	8	322	2.33e-86	263
Msa0278930	MtrunA17_Chr4g0013721	43.974	307	167	3	25	331	95	396	1.34e-85	265
Msa0278930	MtrunA17_Chr1g0213061	41.433	321	177	4	14	332	11	322	4.22e-85	260
Msa0278930	MtrunA17_Chr3g0129061	44.444	324	165	4	6	327	8	318	4.70e-85	260
Msa0278930	MtrunA17_Chr4g0024121	43.302	321	174	4	12	331	13	326	4.94e-85	260
Msa0278930	MtrunA17_Chr5g0438021	42.943	333	173	5	1	331	8	325	2.00e-84	258
Msa0278930	MtrunA17_Chr4g0013821	41.694	307	174	3	26	332	24	325	5.99e-84	258
Msa0278930	MtrunA17_Chr2g0322861	44.340	318	171	5	16	331	73	386	1.44e-83	258
Msa0278930	MtrunA17_Chr4g0076211	45.000	300	154	6	35	333	46	335	3.51e-83	256
Msa0278930	MtrunA17_Chr3g0106901	42.222	315	173	2	17	331	18	323	3.66e-83	255
Msa0278930	MtrunA17_Chr3g0128061	40.061	327	190	3	7	332	6	327	3.47e-80	248
Msa0278930	MtrunA17_Chr1g0204011	42.157	306	171	4	26	331	23	322	6.86e-80	247
Msa0278930	MtrunA17_Chr7g0268501	42.812	320	177	4	12	331	7	320	6.95e-80	247
Msa0278930	MtrunA17_Chr7g0268521	42.812	320	177	4	12	331	7	320	6.95e-80	247
Msa0278930	MtrunA17_Chr5g0421411	43.772	281	153	5	56	332	7	286	1.15e-78	242
Msa0278930	MtrunA17_Chr5g0401431	40.964	332	187	5	3	330	2	328	2.65e-78	243
Msa0278930	MtrunA17_Chr5g0405991	41.558	308	170	7	25	331	18	316	1.00e-76	238
Msa0278930	MtrunA17_Chr7g0224371	39.130	299	172	3	34	332	35	323	2.59e-76	238
Msa0278930	MtrunA17_Chr8g0371381	40.909	308	172	7	25	331	21	319	3.01e-76	237
Msa0278930	MtrunA17_Chr1g0194151	38.024	334	196	5	5	331	4	333	1.21e-74	234
Msa0278930	MtrunA17_Chr1g0194271	37.647	340	196	5	5	331	4	340	1.31e-74	234
Msa0278930	MtrunA17_Chr4g0063671	40.938	320	177	6	17	331	8	320	1.60e-74	233
Msa0278930	MtrunA17_Chr1g0148021	40.984	305	176	2	29	331	26	328	8.55e-74	231
Msa0278930	MtrunA17_Chr6g0467161	40.000	345	174	9	9	332	5	337	1.14e-73	231
Msa0278930	MtrunA17_Chr6g0477071	39.157	332	182	10	6	331	25	342	2.22e-73	231
Msa0278930	MtrunA17_Chr4g0053871	43.077	325	165	7	8	327	11	320	3.09e-73	230
Msa0278930	MtrunA17_Chr2g0296621	41.528	301	164	6	33	332	53	342	4.55e-73	230
Msa0278930	MtrunA17_Chr4g0075241	38.369	331	196	4	5	331	1	327	5.79e-73	229
Msa0278930	MtrunA17_Chr7g0225221	41.158	311	169	4	25	331	20	320	7.88e-73	229
Msa0278930	MtrunA17_Chr7g0254201	39.088	307	174	6	28	332	18	313	3.73e-72	227
Msa0278930	MtrunA17_Chr2g0279041	42.053	302	164	5	34	331	31	325	1.00e-71	226
Msa0278930	MtrunA17_Chr1g0157051	39.474	304	173	5	30	331	24	318	5.56e-71	224
Msa0278930	MtrunA17_Chr1g0164891	38.742	302	179	4	34	331	93	392	1.49e-70	225
Msa0278930	MtrunA17_Chr1g0188431	40.397	302	167	7	30	331	39	327	3.21e-70	222
Msa0278930	MtrunA17_Chr4g0072091	42.904	303	163	4	29	327	23	319	3.37e-69	219
Msa0278930	MtrunA17_Chr6g0467121	42.951	305	156	9	30	331	74	363	9.43e-69	220
Msa0278930	MtrunA17_Chr5g0432401	39.319	323	146	4	12	331	11	286	2.03e-68	216
Msa0278930	MtrunA17_Chr1g0197411	36.686	338	203	6	1	333	1	332	4.20e-66	212
Msa0278930	MtrunA17_Chr6g0467251	40.667	300	165	6	30	327	36	324	6.95e-66	211
Msa0278930	MtrunA17_Chr4g0046131	39.344	305	178	5	29	328	41	343	1.01e-65	211
Msa0278930	MtrunA17_Chr7g0254231	38.033	305	177	7	28	332	20	312	6.67e-64	205
Msa0278930	MtrunA17_Chr8g0364291	36.562	320	198	4	16	333	10	326	7.05e-64	206
Msa0278930	MtrunA17_Chr2g0278671	39.871	311	175	7	26	331	20	323	2.85e-63	204
Msa0278930	MtrunA17_Chr6g0460711	39.159	309	179	6	23	331	15	314	5.73e-62	201
Msa0278930	MtrunA17_Chr3g0136751	37.261	314	189	3	22	333	17	324	1.23e-61	200
Msa0278930	MtrunA17_Chr2g0316481	34.375	352	190	7	15	328	55	403	1.88e-60	199
Msa0278930	MtrunA17_Chr5g0413051	35.370	311	192	6	27	331	70	377	3.89e-60	197
Msa0278930	MtrunA17_Chr2g0316791	35.227	352	187	8	15	328	55	403	5.06e-60	198
Msa0278930	MtrunA17_Chr2g0329641	33.974	312	188	6	29	332	35	336	3.79e-59	194
Msa0278930	MtrunA17_Chr2g0316831	34.188	351	190	7	15	327	91	438	3.49e-58	194
Msa0278930	MtrunA17_Chr2g0316191	33.994	353	191	8	15	328	55	404	1.38e-57	192
Msa0278930	MtrunA17_Chr2g0311251	35.821	335	179	7	30	332	11	341	9.52e-57	188
Msa0278930	MtrunA17_Chr2g0311241	32.071	396	186	8	16	332	40	431	2.92e-55	186
Msa0278930	MtrunA17_Chr2g0279061	41.603	262	142	5	74	331	12	266	5.09e-55	181
Msa0278930	MtrunA17_Chr6g0451571	33.546	313	193	6	26	331	30	334	1.67e-54	182
Msa0278930	MtrunA17_Chr1g0181511	34.304	309	192	5	27	332	24	324	1.27e-53	179
Msa0278930	MtrunA17_Chr1g0181481	35.065	308	189	4	28	332	25	324	4.98e-53	177
Msa0278930	MtrunA17_Chr1g0181431	34.416	308	191	4	28	332	25	324	1.41e-52	176
Msa0278930	MtrunA17_Chr4g0004591	32.716	324	156	4	27	330	74	355	4.84e-50	171
Msa0278930	MtrunA17_Chr4g0074851	33.003	303	192	4	33	332	35	329	6.32e-49	167
Msa0278930	MtrunA17_Chr3g0114461	43.158	190	100	2	142	331	11	192	6.24e-46	155
Msa0278930	MtrunA17_Chr2g0316811	36.328	256	139	5	15	247	29	283	1.96e-44	155
Msa0278930	MtrunA17_Chr3g0114491	56.364	110	48	0	29	138	17	126	7.96e-37	129
Msa0278930	MtrunA17_Chr2g0316141	31.959	291	143	9	76	332	11	280	1.05e-31	120
Msa0278930	MtrunA17_Chr2g0316181	31.959	291	143	9	76	332	11	280	1.05e-31	120
Msa0278930	MtrunA17_Chr5g0432321	41.935	124	64	2	151	274	17	132	6.09e-24	95.5
Msa0278930	MtrunA17_Chr1g0181501	31.088	193	122	4	143	332	6	190	5.82e-23	94.7
Msa0278930	MtrunA17_Chr1g0181491	43.519	108	59	2	27	134	9	114	2.46e-20	86.3
Msa0278930	MtrunA17_Chr3g0104101	35.664	143	87	5	194	332	9	150	4.23e-18	80.1
Msa0278930	MtrunA17_Chr2g0316771	28.177	181	98	4	180	330	7	185	4.79e-16	75.5
Msa0278930	MtrunA17_Chr4g0013811	47.222	72	38	0	142	213	7	78	8.27e-16	71.6
Msa0278930	MtrunA17_Chr7g0254181	33.065	124	80	1	73	196	2	122	1.52e-15	73.2
Msa0278930	MtrunA17_Chr6g0468731	52.113	71	30	2	69	139	22	88	2.15e-15	70.9
Msa0278930	MtrunA17_Chr5g0432361	37.079	89	55	1	242	330	21	108	4.91e-13	65.1
Msa0278930	MtrunA17_Chr1g0196191	47.761	67	34	1	68	134	23	88	2.63e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0278930	AT5G06720.1	56.467	317	138	0	15	331	17	333	7.14e-124	360
Msa0278930	AT2G38380.1	54.434	327	143	2	26	351	27	348	1.24e-123	360
Msa0278930	AT5G06730.1	55.077	325	146	0	15	339	18	342	4.77e-123	358
Msa0278930	AT2G38390.1	52.599	327	149	2	26	351	27	348	1.19e-119	349
Msa0278930	AT3G49120.1	55.380	316	139	2	26	339	28	343	1.30e-117	344
Msa0278930	AT3G32980.1	54.717	318	142	2	26	341	27	344	7.78e-117	342
Msa0278930	AT3G49110.1	55.063	316	140	2	26	339	29	344	3.11e-116	341
Msa0278930	AT4G08770.1	52.795	322	150	2	26	345	20	341	2.27e-115	338
Msa0278930	AT4G08780.1	51.863	322	153	2	26	345	20	341	3.76e-113	333
Msa0278930	AT5G66390.1	47.006	334	173	2	1	331	1	333	2.28e-104	310
Msa0278930	AT4G36430.1	48.701	308	157	1	25	332	25	331	2.96e-100	300
Msa0278930	AT5G19880.1	48.882	313	157	2	22	331	17	329	6.01e-100	298
Msa0278930	AT5G19890.1	50.980	306	142	4	28	331	28	327	6.35e-100	298
Msa0278930	AT2G18150.1	48.013	302	156	1	30	331	36	336	1.84e-97	293
Msa0278930	AT1G44970.1	46.708	319	162	1	21	331	28	346	2.77e-97	292
Msa0278930	AT3G50990.1	48.534	307	157	1	25	331	36	341	4.24e-97	292
Msa0278930	AT2G18140.1	47.351	302	158	1	30	331	35	335	8.35e-96	288
Msa0278930	AT5G05340.1	48.366	306	147	3	28	331	28	324	1.76e-94	285
Msa0278930	AT1G14550.1	47.231	307	152	4	27	331	23	321	1.43e-92	280
Msa0278930	AT1G68850.1	45.928	307	156	6	33	332	33	336	2.26e-91	277
Msa0278930	AT1G49570.1	46.230	305	159	3	28	329	46	348	1.65e-90	275
Msa0278930	AT4G16270.1	45.033	302	163	2	30	331	50	348	1.86e-89	273
Msa0278930	AT1G14540.1	44.172	326	163	4	7	331	8	315	2.75e-89	271
Msa0278930	AT1G71695.1	46.106	321	162	6	30	348	44	355	6.67e-88	269
Msa0278930	AT5G58390.1	44.839	310	157	5	26	331	17	316	2.72e-83	256
Msa0278930	AT2G35380.1	45.912	318	164	4	18	331	22	335	3.50e-83	256
Msa0278930	AT2G22420.1	40.491	326	182	4	6	331	6	319	6.56e-83	255
Msa0278930	AT5G58400.1	44.062	320	162	6	16	331	19	325	1.25e-81	251
Msa0278930	AT3G21770.1	42.540	315	177	3	19	332	18	329	6.05e-81	250
Msa0278930	AT3G03670.1	39.385	325	193	3	7	331	1	321	6.40e-81	249
Msa0278930	AT4G11290.1	42.415	323	181	4	11	331	7	326	1.02e-80	249
Msa0278930	AT1G05260.1	41.317	334	186	6	1	332	1	326	4.00e-80	248
Msa0278930	AT2G18980.1	44.237	321	168	5	15	331	10	323	2.06e-79	246
Msa0278930	AT5G15180.1	40.881	318	182	5	15	331	17	329	1.59e-78	244
Msa0278930	AT4G37530.1	43.689	309	169	3	26	331	23	329	1.71e-78	244
Msa0278930	AT5G17820.1	39.441	322	182	6	10	331	5	313	5.62e-78	242
Msa0278930	AT5G14130.1	41.956	317	177	3	19	331	17	330	7.28e-78	242
Msa0278930	AT3G01190.1	41.049	324	181	7	9	331	7	321	1.15e-77	241
Msa0278930	AT4G30170.1	43.366	309	164	5	27	331	24	325	1.57e-77	241
Msa0278930	AT5G14130.2	41.956	317	177	3	19	331	58	371	1.78e-77	243
Msa0278930	AT5G17820.2	39.441	322	182	6	10	331	58	366	6.82e-77	241
Msa0278930	AT5G51890.1	43.087	311	162	9	26	331	22	322	7.98e-77	239
Msa0278930	AT2G41480.1	40.000	335	182	7	7	331	3	328	5.82e-76	237
Msa0278930	AT5G67400.1	40.964	332	184	5	9	331	1	329	2.01e-75	236
Msa0278930	AT5G64120.1	42.140	299	165	5	33	331	38	328	3.13e-74	233
Msa0278930	AT3G49960.1	40.122	329	187	5	7	331	7	329	1.89e-73	231
Msa0278930	AT4G37520.1	41.042	307	176	3	28	331	25	329	4.63e-73	230
Msa0278930	AT4G37520.2	40.717	307	174	4	28	331	25	326	6.22e-72	227
Msa0278930	AT4G25980.1	39.877	326	181	6	11	331	11	326	2.72e-71	225
Msa0278930	AT5G39580.1	39.514	329	183	7	4	331	6	319	4.65e-69	219
Msa0278930	AT5G42180.1	38.801	317	184	7	15	330	9	316	1.65e-68	218
Msa0278930	AT4G26010.1	39.610	308	170	7	25	331	17	309	1.94e-68	217
Msa0278930	AT4G26010.2	39.610	308	170	7	25	331	45	337	4.06e-68	218
Msa0278930	AT1G05240.1	38.387	310	173	6	30	331	26	325	6.19e-68	216
Msa0278930	AT1G05250.1	38.387	310	173	6	30	331	26	325	6.19e-68	216
Msa0278930	AT4G33420.1	38.485	330	189	8	2	331	10	325	6.89e-68	216
Msa0278930	AT4G37530.2	44.747	257	139	2	26	279	23	279	2.42e-67	214
Msa0278930	AT4G33420.2	38.485	330	189	8	2	331	57	372	3.52e-67	216
Msa0278930	AT5G64110.1	41.060	302	165	6	34	331	38	330	8.32e-67	214
Msa0278930	AT2G39040.1	40.064	312	176	6	27	331	43	350	2.83e-66	213
Msa0278930	AT4G33870.1	34.911	338	180	5	27	328	65	398	4.47e-66	214
Msa0278930	AT4G17690.1	37.864	309	181	5	30	335	26	326	3.76e-65	209
Msa0278930	AT2G34060.1	38.312	308	181	6	27	328	39	343	2.30e-64	208
Msa0278930	AT4G31760.1	36.119	335	201	5	1	331	1	326	2.57e-64	207
Msa0278930	AT2G24800.1	38.636	308	178	5	28	331	29	329	1.51e-63	205
Msa0278930	AT1G77100.1	39.550	311	172	6	26	331	20	319	6.69e-63	203
Msa0278930	AT5G64100.1	38.742	302	172	6	33	331	40	331	8.81e-63	203
Msa0278930	AT2G43480.1	35.608	337	185	10	16	331	10	335	2.67e-62	202
Msa0278930	AT5G22410.1	35.331	317	191	8	17	328	15	322	5.40e-62	201
Msa0278930	AT1G30870.1	36.721	305	176	7	33	332	54	346	1.76e-61	201
Msa0278930	AT1G34510.1	36.393	305	178	6	28	331	20	309	3.45e-61	199
Msa0278930	AT5G40150.1	35.669	314	185	5	24	331	26	328	5.04e-60	196
Msa0278930	AT2G35380.2	45.344	247	131	3	89	331	1	247	6.65e-60	193
Msa0278930	AT3G28200.1	35.873	315	180	7	25	331	16	316	1.20e-59	195
Msa0278930	AT5G47000.1	34.727	311	193	5	28	335	31	334	2.29e-58	192
Msa0278930	AT5G24070.1	34.911	338	192	10	7	332	15	336	5.00e-58	191
Msa0278930	AT1G24110.1	36.000	325	197	8	11	331	5	322	2.46e-56	187
Msa0278930	AT3G17070.1	34.718	337	202	7	3	331	13	339	2.85e-53	179
Msa0278930	AT2G37130.1	35.275	309	188	6	27	331	27	327	2.92e-52	176
Msa0278930	AT2G37130.2	35.314	303	184	6	33	331	2	296	5.93e-51	172
Msa0278930	AT4G21960.1	33.443	305	188	5	33	332	34	328	2.75e-50	171
Msa0278930	AT4G25980.2	43.939	198	97	5	11	208	56	239	5.08e-44	153
Msa0278930	AT3G17070.2	35.075	268	157	7	72	331	18	276	9.28e-38	137
Msa0278930	AT5G39580.2	39.024	205	113	4	4	208	6	198	1.33e-37	135
Msa0278930	AT2G24800.2	38.690	168	99	1	28	195	29	192	3.04e-34	126
Msa0278930	AT3G42570.1	34.653	101	65	1	98	197	49	149	2.84e-11	61.6

Find 90 sgRNAs with CRISPR-Local

Find 149 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACTGATCTTGTTGCACTTTC+AGG	0.109767	2_3:-12112453	Msa0278930:intron
CCTCTTATTGAGTTGTTATT+TGG	0.149850	2_3:+12113725	None:intergenic
TAAGGCTTCCATGATCAAAA+TGG	0.205148	2_3:-12111830	Msa0278930:CDS
TAGAACACGCTCTTTATTAT+AGG	0.214224	2_3:+12111644	None:intergenic
TTAGCTGACTAAGATTAAAT+TGG	0.239079	2_3:+12112508	None:intergenic
ACCATCTTCTGCTGAATCTT+TGG	0.254778	2_3:+12111720	None:intergenic
TATAATAAAGAGCGTGTTCT+AGG	0.262669	2_3:-12111642	Msa0278930:three_prime_UTR
TGCTAATATTTCCTCAGTTC+TGG	0.269373	2_3:-12113618	Msa0278930:intron
CGCTTGTGGAAAACAATTCT+TGG	0.287458	2_3:+12111917	None:intergenic
ATGATCAAAATGGGTAATAT+TGG	0.290646	2_3:-12111820	Msa0278930:CDS
TAATAGCACACTCACCAATT+TGG	0.298613	2_3:-12112016	Msa0278930:CDS
AAACTATCTCTTCTTCCTAA+TGG	0.298706	2_3:+12112573	None:intergenic
TAGCTGACTAAGATTAAATT+GGG	0.348173	2_3:+12112509	None:intergenic
GTATGCTTGCCAGTTTCATT+AGG	0.349331	2_3:-12114093	Msa0278930:CDS
AAGCTTCAAAGAAAAGAGTT+TGG	0.356755	2_3:+12111854	None:intergenic
CATTTCATCATTTCGTGCTT+CGG	0.363561	2_3:+12114399	None:intergenic
TGCAGGCTCATGGTCCTGAT+TGG	0.384353	2_3:-12112602	Msa0278930:intron
TTAATTGTGTCTACCACCTA+TGG	0.394408	2_3:+12114324	None:intergenic
TAACAACTCAATAAGAGGTT+TGG	0.401893	2_3:-12113720	Msa0278930:CDS
AAAGTGAAGCCTAATGAAAC+TGG	0.404928	2_3:+12114084	None:intergenic
CCAAATAACAACTCAATAAG+AGG	0.412063	2_3:-12113725	Msa0278930:CDS
TGCTGAATCTTTGGTGACTT+TGG	0.413622	2_3:+12111729	None:intergenic
TAGCTCGAGTCGAATGTATC+TGG	0.415232	2_3:+12111982	None:intergenic
TGCTGTGTAGTGGTTGTGCT+TGG	0.416566	2_3:-12114232	Msa0278930:CDS
AGAACAACATGTCCCATTGA+TGG	0.419758	2_3:-12112042	Msa0278930:CDS
TTGACAATGGAAGTGACATT+TGG	0.425363	2_3:+12114151	None:intergenic
CCTGATTGGGAAGTTCCATT+AGG	0.430222	2_3:-12112588	Msa0278930:CDS
TGGAGTGGTTGGGTCCAAAT+TGG	0.439167	2_3:+12112002	None:intergenic
CTCAAACCTAAGGATTCAAA+AGG	0.440527	2_3:-12111956	Msa0278930:CDS
TAAGACTAGTTGCATAAGAA+AGG	0.442971	2_3:-12111673	Msa0278930:three_prime_UTR
TCTATTTATATAGAGAGAAA+TGG	0.443057	2_3:+12114355	None:intergenic
AAGGCTTCCATGATCAAAAT+GGG	0.443699	2_3:-12111829	Msa0278930:CDS
GCAGGCTCATGGTCCTGATT+GGG	0.445752	2_3:-12112601	Msa0278930:intron
CCTAATGGAACTTCCCAATC+AGG	0.449764	2_3:+12112588	None:intergenic
TCGAATGTATCTGGAGTGGT+TGG	0.452877	2_3:+12111991	None:intergenic
ATATTAGGTGCTCATACAAT+TGG	0.452950	2_3:-12112162	Msa0278930:intron
CAAGTGTCCTTGTAGAAGTT+AGG	0.456671	2_3:+12114175	None:intergenic
GTGTTCTAGGGGAACATACA+TGG	0.463694	2_3:-12111629	Msa0278930:three_prime_UTR
CTAAGATTAAATTGGGGAGC+AGG	0.471922	2_3:+12112516	None:intergenic
TGTGTAGTGGTTGTGCTTGG+AGG	0.472368	2_3:-12114229	Msa0278930:CDS
AAGTAGGTTGTGTTAAGAGT+TGG	0.473975	2_3:+12112075	None:intergenic
ATAATAAAGAGCGTGTTCTA+GGG	0.480451	2_3:-12111641	Msa0278930:three_prime_UTR
AAATTGGTGAGTGTGCTATT+AGG	0.482129	2_3:+12112018	None:intergenic
TGTGCTGATATTCTTGCACT+TGG	0.484999	2_3:-12113641	Msa0278930:CDS
TAATTGTGTCTACCACCTAT+GGG	0.488907	2_3:+12114325	None:intergenic
GTGTAGTGGTTGTGCTTGGA+GGG	0.502187	2_3:-12114228	Msa0278930:CDS
GGTTGTGTTAAGAGTTGGAT+CGG	0.505458	2_3:+12112080	None:intergenic
TGTTCTCAATGTTTGTAAGT+AGG	0.516930	2_3:+12112059	None:intergenic
CTTTGGTGACTTTGGTAGCA+AGG	0.519220	2_3:+12111737	None:intergenic
AGCACGAAATGATGAAATGC+AGG	0.538904	2_3:-12114395	Msa0278930:five_prime_UTR
ACCAAAGATTCAGCAGAAGA+TGG	0.540906	2_3:-12111721	Msa0278930:CDS
CGAATGTATCTGGAGTGGTT+GGG	0.542591	2_3:+12111992	None:intergenic
GTTGTGTTAAGAGTTGGATC+GGG	0.543829	2_3:+12112081	None:intergenic
AAGTTGTGCATTTGAAGAGA+AGG	0.544272	2_3:+12114201	None:intergenic
AGTTGTGCATTTGAAGAGAA+GGG	0.549134	2_3:+12114202	None:intergenic
GGCAGCTTTGTGCTGTGTAG+TGG	0.549901	2_3:-12114242	Msa0278930:CDS
TGACATAATTTGCAGGCTCA+TGG	0.551671	2_3:-12112612	Msa0278930:intron
AGTGGTGTTTGCGCCGCTTG+TGG	0.552455	2_3:+12111903	None:intergenic
CGAGCTACTACTCAAACCTA+AGG	0.553925	2_3:-12111966	Msa0278930:CDS
GTGCTATTAGGTCCATCAAT+GGG	0.561855	2_3:+12112030	None:intergenic
GATTAAATTGGGGAGCAGGA+AGG	0.565650	2_3:+12112520	None:intergenic
GATACTATAGTGAGCGAGCA+AGG	0.567257	2_3:-12113755	Msa0278930:CDS
ATATCCTCCTTTGCTGAACA+AGG	0.570048	2_3:-12112486	Msa0278930:CDS
TGCTAAGACTTGTTTGACAA+TGG	0.574005	2_3:+12114138	None:intergenic
TGTGCTATTAGGTCCATCAA+TGG	0.576345	2_3:+12112029	None:intergenic
GTCGAGACCTTGTTCAGCAA+AGG	0.585565	2_3:+12112479	None:intergenic
TAAATAGATATGAACCCCAT+AGG	0.588142	2_3:-12114340	Msa0278930:five_prime_UTR
ATATAGAGAGAAATGGCTTG+TGG	0.592473	2_3:+12114362	None:intergenic
TCAAACCTAAGGATTCAAAA+GGG	0.596776	2_3:-12111955	Msa0278930:CDS
GAGACCTTGTTCAGCAAAGG+AGG	0.615684	2_3:+12112482	None:intergenic
ACTTGATCCTAACTTCTACA+AGG	0.616898	2_3:-12114182	Msa0278930:CDS
GGTGCTCATACAATTGGCAG+AGG	0.628165	2_3:-12112156	Msa0278930:CDS
ATGAAACTGGCAAGCATACG+AGG	0.628320	2_3:+12114097	None:intergenic
TAATAAAGAGCGTGTTCTAG+GGG	0.628391	2_3:-12111640	Msa0278930:three_prime_UTR
GTGATATACGCATGAGAACG+AGG	0.637331	2_3:-12111451	Msa0278930:three_prime_UTR
GAAACTATTGACAATGGCAG+TGG	0.640788	2_3:+12111885	None:intergenic
ACACGCTCTTTATTATAGGT+AGG	0.643569	2_3:+12111648	None:intergenic
GTTGTTGAAACTATTGACAA+TGG	0.651873	2_3:+12111879	None:intergenic
AATTGTGTCTACCACCTATG+GGG	0.653520	2_3:+12114326	None:intergenic
CGAGTCGAATGTATCTGGAG+TGG	0.656528	2_3:+12111987	None:intergenic
TCAGCACAAGACACAACACT+AGG	0.664175	2_3:+12113656	None:intergenic
ATAGATATGAACCCCATAGG+TGG	0.668035	2_3:-12114337	Msa0278930:five_prime_UTR
AGCTGACTAAGATTAAATTG+GGG	0.668986	2_3:+12112510	None:intergenic
ACAATTGGCAGAGGTCAATG+TGG	0.669242	2_3:-12112147	Msa0278930:CDS
TGTTCTAGGGGAACATACAT+GGG	0.669525	2_3:-12111628	Msa0278930:three_prime_UTR
GGAGTGTTAAATGAAACTCA+AGG	0.673821	2_3:-12111799	Msa0278930:CDS
GAATCAAATCAAAGCCGCAG+TGG	0.686967	2_3:-12113690	Msa0278930:CDS
TGTGGAACATACCAGAACTG+AGG	0.701189	2_3:+12113607	None:intergenic
AGGACAAGCAAGTTCCACTG+CGG	0.797507	2_3:+12113676	None:intergenic
ATATACGCATGAGAACGAGG+AGG	0.799200	2_3:-12111448	Msa0278930:three_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAAGAAGAAATTTAATTATA+AGG	+	chr2_3:12112698-12112717	None:intergenic	10.0%
!!	AACAATACAAAAAAAAATTA+AGG	+	chr2_3:12112997-12113016	None:intergenic	10.0%
!!!	AATTTTTTTTTGTATTGTTA+TGG	-	chr2_3:12112998-12113017	Msa0278930:intron	10.0%
!!	AAAATTATTATTAATGAAAG+TGG	-	chr2_3:12113609-12113628	Msa0278930:intron	10.0%
!!!	TAAACTTTTAACAAAATCAT+AGG	+	chr2_3:12111963-12111982	None:intergenic	15.0%
!!!	TTTTTAGAGTATTAGAAAAT+TGG	+	chr2_3:12112072-12112091	None:intergenic	15.0%
!!	ATATATGTTATATCTATGTA+AGG	-	chr2_3:12112121-12112140	Msa0278930:CDS	15.0%
!!	TATATGTTATATCTATGTAA+GGG	-	chr2_3:12112122-12112141	Msa0278930:CDS	15.0%
!!!	TTAAAATTTGTTTTAAGTCT+CGG	+	chr2_3:12112358-12112377	None:intergenic	15.0%
!!!	TTTTTTTTTTTTTTTTGGTC+AGG	+	chr2_3:12112930-12112949	None:intergenic	15.0%
!!	TCTTAATATAAAAGACTAAA+AGG	-	chr2_3:12113105-12113124	Msa0278930:intron	15.0%
!!	AAAAAGTTTATTTAAAGGAA+AGG	+	chr2_3:12113173-12113192	None:intergenic	15.0%
!!	GAGAAAAAAAGTTTATTTAA+AGG	+	chr2_3:12113178-12113197	None:intergenic	15.0%
!!!	GTATGCTTTTAAAAAATATT+AGG	-	chr2_3:12113754-12113773	Msa0278930:CDS	15.0%
!!!	TTTTGTAATTTTGTAATCTA+TGG	-	chr2_3:12114366-12114385	Msa0278930:five_prime_UTR	15.0%
!!	TCTATTTATATAGAGAGAAA+TGG	+	chr2_3:12111579-12111598	None:intergenic	20.0%
!!	TTGGTGCATATTTAAATTTA+TGG	+	chr2_3:12112029-12112048	None:intergenic	20.0%
!!	AAATATATTACTCTTCGTAT+TGG	+	chr2_3:12112048-12112067	None:intergenic	20.0%
!!	CTAAAAACGTTACTAAAATT+TGG	-	chr2_3:12112085-12112104	Msa0278930:CDS	20.0%
!!!	ACTTTAATAGTCTTATCATT+AGG	-	chr2_3:12112546-12112565	Msa0278930:CDS	20.0%
!!	TTTAGATTTGTAGTATATGA+TGG	+	chr2_3:12112587-12112606	None:intergenic	20.0%
!!!	TATTGTTATGGTTTTAGTTT+TGG	-	chr2_3:12113010-12113029	Msa0278930:intron	20.0%
!!	TTAAGACTAAAATCAACAAT+AGG	+	chr2_3:12113091-12113110	None:intergenic	20.0%
!!!	CATATATTTCTACATATATG+TGG	-	chr2_3:12113556-12113575	Msa0278930:intron	20.0%
!!!	ATCATCAGTTTTTACTTTTT+AGG	-	chr2_3:12114458-12114477	Msa0278930:five_prime_UTR	20.0%
!	CATAGTACTATAAAATGTCT+AGG	-	chr2_3:12112853-12112872	Msa0278930:intron	25.0%
!!!	AGGTTGATCTTTTTCTATTT+AGG	+	chr2_3:12112910-12112929	None:intergenic	25.0%
!!	ACAATAGGAAGAAATTTTGT+AGG	+	chr2_3:12113076-12113095	None:intergenic	25.0%
!	AAAGGAAAGGAATTAAAGAA+AGG	+	chr2_3:12113160-12113179	None:intergenic	25.0%
!	TAGCTGACTAAGATTAAATT+GGG	+	chr2_3:12113425-12113444	None:intergenic	25.0%
!	TTAGCTGACTAAGATTAAAT+TGG	+	chr2_3:12113426-12113445	None:intergenic	25.0%
!!	GTACAACTATAGCTTTTTAT+AGG	+	chr2_3:12113520-12113539	None:intergenic	25.0%
!	AGATTTAATTGTGTCAATTG+AGG	-	chr2_3:12113667-12113686	Msa0278930:CDS	25.0%
!	CCACATATATATACATAATG+AGG	+	chr2_3:12113723-12113742	None:intergenic	25.0%
!	CCTCATTATGTATATATATG+TGG	-	chr2_3:12113720-12113739	Msa0278930:CDS	25.0%
!!!	TCTTTTCTTTGAAGCTTTTA+AGG	-	chr2_3:12114083-12114102	Msa0278930:CDS	25.0%
!!!	AATATTACCCATTTTGATCA+TGG	+	chr2_3:12114112-12114131	None:intergenic	25.0%
!	ATGATCAAAATGGGTAATAT+TGG	-	chr2_3:12114111-12114130	Msa0278930:CDS	25.0%
	TAAATAGATATGAACCCCAT+AGG	-	chr2_3:12111591-12111610	Msa0278930:three_prime_UTR	30.0%
!	CTCTTCTTTTCATATCACAT+TGG	-	chr2_3:12111668-12111687	Msa0278930:three_prime_UTR	30.0%
	TGATTCTATCAAACTCAATG+TGG	+	chr2_3:12111933-12111952	None:intergenic	30.0%
!	CCTCTTATTGAGTTGTTATT+TGG	+	chr2_3:12112209-12112228	None:intergenic	30.0%
	CCAAATAACAACTCAATAAG+AGG	-	chr2_3:12112206-12112225	Msa0278930:intron	30.0%
	TAACAACTCAATAAGAGGTT+TGG	-	chr2_3:12112211-12112230	Msa0278930:intron	30.0%
!!	ACTTTCAAGTTACTTACAGA+TGG	+	chr2_3:12112882-12112901	None:intergenic	30.0%
!!!	AAAGAAAGGCATTTTCTTAG+AGG	+	chr2_3:12113146-12113165	None:intergenic	30.0%
!	CTTGTGATTCTAATTTTTCC+TGG	-	chr2_3:12113296-12113315	Msa0278930:intron	30.0%
	AAACTATCTCTTCTTCCTAA+TGG	+	chr2_3:12113361-12113380	None:intergenic	30.0%
	AGCTGACTAAGATTAAATTG+GGG	+	chr2_3:12113424-12113443	None:intergenic	30.0%
	CAATTAAATCTCGTTAGAGA+CGG	+	chr2_3:12113658-12113677	None:intergenic	30.0%
	ATATTAGGTGCTCATACAAT+TGG	-	chr2_3:12113769-12113788	Msa0278930:CDS	30.0%
	TGTTCTCAATGTTTGTAAGT+AGG	+	chr2_3:12113875-12113894	None:intergenic	30.0%
	TCAAACCTAAGGATTCAAAA+GGG	-	chr2_3:12113976-12113995	Msa0278930:intron	30.0%
	GTTGTTGAAACTATTGACAA+TGG	+	chr2_3:12114055-12114074	None:intergenic	30.0%
	AAGCTTCAAAGAAAAGAGTT+TGG	+	chr2_3:12114080-12114099	None:intergenic	30.0%
!	TAAGACTAGTTGCATAAGAA+AGG	-	chr2_3:12114258-12114277	Msa0278930:CDS	30.0%
	TAGAACACGCTCTTTATTAT+AGG	+	chr2_3:12114290-12114309	None:intergenic	30.0%
!	TATAATAAAGAGCGTGTTCT+AGG	-	chr2_3:12114289-12114308	Msa0278930:exon	30.0%
!	ATAATAAAGAGCGTGTTCTA+GGG	-	chr2_3:12114290-12114309	Msa0278930:exon	30.0%
	CATTTCATCATTTCGTGCTT+CGG	+	chr2_3:12111535-12111554	None:intergenic	35.0%
	ATATAGAGAGAAATGGCTTG+TGG	+	chr2_3:12111572-12111591	None:intergenic	35.0%
	TAATTGTGTCTACCACCTAT+GGG	+	chr2_3:12111609-12111628	None:intergenic	35.0%
	TTAATTGTGTCTACCACCTA+TGG	+	chr2_3:12111610-12111629	None:intergenic	35.0%
	AGTTGTGCATTTGAAGAGAA+GGG	+	chr2_3:12111732-12111751	None:intergenic	35.0%
	AAGTTGTGCATTTGAAGAGA+AGG	+	chr2_3:12111733-12111752	None:intergenic	35.0%
	ACTTGATCCTAACTTCTACA+AGG	-	chr2_3:12111749-12111768	Msa0278930:CDS	35.0%
	TTGACAATGGAAGTGACATT+TGG	+	chr2_3:12111783-12111802	None:intergenic	35.0%
!	TGCTAAGACTTGTTTGACAA+TGG	+	chr2_3:12111796-12111815	None:intergenic	35.0%
	AAAGTGAAGCCTAATGAAAC+TGG	+	chr2_3:12111850-12111869	None:intergenic	35.0%
	TGAGTTTGACAAAATCACGT+AGG	+	chr2_3:12112006-12112025	None:intergenic	35.0%
	TGCTAATATTTCCTCAGTTC+TGG	-	chr2_3:12112313-12112332	Msa0278930:intron	35.0%
!	AGTATATGATGGAATGAGCA+GGG	+	chr2_3:12112576-12112595	None:intergenic	35.0%
!	TAGTATATGATGGAATGAGC+AGG	+	chr2_3:12112577-12112596	None:intergenic	35.0%
	TCTTGAATAGTTGACAGGTT+TGG	+	chr2_3:12112737-12112756	None:intergenic	35.0%
	TCTCTTCTTGAATAGTTGAC+AGG	+	chr2_3:12112742-12112761	None:intergenic	35.0%
	TGTCAACTATTCAAGAAGAG+AGG	-	chr2_3:12112741-12112760	Msa0278930:intron	35.0%
	AAGAAACCTAGCATCAAAGA+TGG	+	chr2_3:12112833-12112852	None:intergenic	35.0%
	AAGTAGGTTGTGTTAAGAGT+TGG	+	chr2_3:12113859-12113878	None:intergenic	35.0%
!	AAATTGGTGAGTGTGCTATT+AGG	+	chr2_3:12113916-12113935	None:intergenic	35.0%
	TAATAGCACACTCACCAATT+TGG	-	chr2_3:12113915-12113934	Msa0278930:intron	35.0%
	CTCAAACCTAAGGATTCAAA+AGG	-	chr2_3:12113975-12113994	Msa0278930:intron	35.0%
!	CAAGAATTGTTTTCCACAAG+CGG	-	chr2_3:12114015-12114034	Msa0278930:intron	35.0%
	TAAGGCTTCCATGATCAAAA+TGG	-	chr2_3:12114101-12114120	Msa0278930:CDS	35.0%
	AAGGCTTCCATGATCAAAAT+GGG	-	chr2_3:12114102-12114121	Msa0278930:CDS	35.0%
!	GGAGTGTTAAATGAAACTCA+AGG	-	chr2_3:12114132-12114151	Msa0278930:CDS	35.0%
	ACACGCTCTTTATTATAGGT+AGG	+	chr2_3:12114286-12114305	None:intergenic	35.0%
!	TAATAAAGAGCGTGTTCTAG+GGG	-	chr2_3:12114291-12114310	Msa0278930:five_prime_UTR	35.0%
	AGCACGAAATGATGAAATGC+AGG	-	chr2_3:12111536-12111555	Msa0278930:three_prime_UTR	40.0%
	ATAGATATGAACCCCATAGG+TGG	-	chr2_3:12111594-12111613	Msa0278930:three_prime_UTR	40.0%
	AATTGTGTCTACCACCTATG+GGG	+	chr2_3:12111608-12111627	None:intergenic	40.0%
	CAAGTGTCCTTGTAGAAGTT+AGG	+	chr2_3:12111759-12111778	None:intergenic	40.0%
	GTATGCTTGCCAGTTTCATT+AGG	-	chr2_3:12111838-12111857	Msa0278930:CDS	40.0%
!	TGTGCTGATATTCTTGCACT+TGG	-	chr2_3:12112290-12112309	Msa0278930:intron	40.0%
	TAAGTCTCGGTTAGAAGATG+TGG	+	chr2_3:12112345-12112364	None:intergenic	40.0%
!	TTCCTGGTGACATAATTTGC+AGG	-	chr2_3:12113312-12113331	Msa0278930:intron	40.0%
!	TGACATAATTTGCAGGCTCA+TGG	-	chr2_3:12113319-12113338	Msa0278930:intron	40.0%
	CTAAGATTAAATTGGGGAGC+AGG	+	chr2_3:12113418-12113437	None:intergenic	40.0%
	ATATCCTCCTTTGCTGAACA+AGG	-	chr2_3:12113445-12113464	Msa0278930:intron	40.0%
	ACTGATCTTGTTGCACTTTC+AGG	-	chr2_3:12113478-12113497	Msa0278930:intron	40.0%
!	TGTTGCACTTTCAGGTATGA+AGG	-	chr2_3:12113486-12113505	Msa0278930:intron	40.0%
	GTTGTGTTAAGAGTTGGATC+GGG	+	chr2_3:12113853-12113872	None:intergenic	40.0%
	GGTTGTGTTAAGAGTTGGAT+CGG	+	chr2_3:12113854-12113873	None:intergenic	40.0%
	AGAACAACATGTCCCATTGA+TGG	-	chr2_3:12113889-12113908	Msa0278930:intron	40.0%
!	GTGCTATTAGGTCCATCAAT+GGG	+	chr2_3:12113904-12113923	None:intergenic	40.0%
!	TGTGCTATTAGGTCCATCAA+TGG	+	chr2_3:12113905-12113924	None:intergenic	40.0%
!	ACAAGCCCTTTTGAATCCTT+AGG	+	chr2_3:12113984-12114003	None:intergenic	40.0%
	CGCTTGTGGAAAACAATTCT+TGG	+	chr2_3:12114017-12114036	None:intergenic	40.0%
	GAAACTATTGACAATGGCAG+TGG	+	chr2_3:12114049-12114068	None:intergenic	40.0%
!	TGCTGAATCTTTGGTGACTT+TGG	+	chr2_3:12114205-12114224	None:intergenic	40.0%
	ACCAAAGATTCAGCAGAAGA+TGG	-	chr2_3:12114210-12114229	Msa0278930:CDS	40.0%
	ACCATCTTCTGCTGAATCTT+TGG	+	chr2_3:12114214-12114233	None:intergenic	40.0%
!!	TGTTCTAGGGGAACATACAT+GGG	-	chr2_3:12114303-12114322	Msa0278930:five_prime_UTR	40.0%
	ATGAAACTGGCAAGCATACG+AGG	+	chr2_3:12111837-12111856	None:intergenic	45.0%
	GATACTATAGTGAGCGAGCA+AGG	-	chr2_3:12112176-12112195	Msa0278930:intron	45.0%
	GAATCAAATCAAAGCCGCAG+TGG	-	chr2_3:12112241-12112260	Msa0278930:intron	45.0%
	TCAGCACAAGACACAACACT+AGG	+	chr2_3:12112278-12112297	None:intergenic	45.0%
	TGTGGAACATACCAGAACTG+AGG	+	chr2_3:12112327-12112346	None:intergenic	45.0%
!	AGCATTGAAAGCCTCTTAGC+CGG	-	chr2_3:12112807-12112826	Msa0278930:intron	45.0%
	AACCTAGCATCAAAGATGGC+CGG	+	chr2_3:12112829-12112848	None:intergenic	45.0%
	AGCCTGCAAATTATGTCACC+AGG	+	chr2_3:12113317-12113336	None:intergenic	45.0%
	CCTAATGGAACTTCCCAATC+AGG	+	chr2_3:12113346-12113365	None:intergenic	45.0%
	CCTGATTGGGAAGTTCCATT+AGG	-	chr2_3:12113343-12113362	Msa0278930:intron	45.0%
	GATTAAATTGGGGAGCAGGA+AGG	+	chr2_3:12113414-12113433	None:intergenic	45.0%
	ACAATTGGCAGAGGTCAATG+TGG	-	chr2_3:12113784-12113803	Msa0278930:CDS	45.0%
!	CGAATGTATCTGGAGTGGTT+GGG	+	chr2_3:12113942-12113961	None:intergenic	45.0%
!	TCGAATGTATCTGGAGTGGT+TGG	+	chr2_3:12113943-12113962	None:intergenic	45.0%
	TAGCTCGAGTCGAATGTATC+TGG	+	chr2_3:12113952-12113971	None:intergenic	45.0%
	CGAGCTACTACTCAAACCTA+AGG	-	chr2_3:12113965-12113984	Msa0278930:intron	45.0%
!	CTTTGGTGACTTTGGTAGCA+AGG	+	chr2_3:12114197-12114216	None:intergenic	45.0%
!!	GTGTTCTAGGGGAACATACA+TGG	-	chr2_3:12114302-12114321	Msa0278930:five_prime_UTR	45.0%
!	GGCTTTTCTCTTGTGCTGTA+TGG	-	chr2_3:12114324-12114343	Msa0278930:five_prime_UTR	45.0%
	GTGATATACGCATGAGAACG+AGG	-	chr2_3:12114480-12114499	Msa0278930:five_prime_UTR	45.0%
	ATATACGCATGAGAACGAGG+AGG	-	chr2_3:12114483-12114502	Msa0278930:five_prime_UTR	45.0%
!!!	TTCTATTTTTTTTTTTTTTT+TGG	+	chr2_3:12112935-12112954	None:intergenic	5.0%
	TGCTGTGTAGTGGTTGTGCT+TGG	-	chr2_3:12111699-12111718	Msa0278930:exon	50.0%
	TGTGTAGTGGTTGTGCTTGG+AGG	-	chr2_3:12111702-12111721	Msa0278930:CDS	50.0%
	GTGTAGTGGTTGTGCTTGGA+GGG	-	chr2_3:12111703-12111722	Msa0278930:CDS	50.0%
	AGGACAAGCAAGTTCCACTG+CGG	+	chr2_3:12112258-12112277	None:intergenic	50.0%
	ATCAAAGATGGCCGGCTAAG+AGG	+	chr2_3:12112821-12112840	None:intergenic	50.0%
	GAGACCTTGTTCAGCAAAGG+AGG	+	chr2_3:12113452-12113471	None:intergenic	50.0%
	GTCGAGACCTTGTTCAGCAA+AGG	+	chr2_3:12113455-12113474	None:intergenic	50.0%
	GGTGCTCATACAATTGGCAG+AGG	-	chr2_3:12113775-12113794	Msa0278930:CDS	50.0%
	TGGAGTGGTTGGGTCCAAAT+TGG	+	chr2_3:12113932-12113951	None:intergenic	50.0%
	CGAGTCGAATGTATCTGGAG+TGG	+	chr2_3:12113947-12113966	None:intergenic	50.0%
!	GGCAGCTTTGTGCTGTGTAG+TGG	-	chr2_3:12111689-12111708	Msa0278930:exon	55.0%
	AGCCGGCCATCTTTGATGCT+AGG	-	chr2_3:12112824-12112843	Msa0278930:intron	55.0%
	TGCAGGCTCATGGTCCTGAT+TGG	-	chr2_3:12113329-12113348	Msa0278930:intron	55.0%
	GCAGGCTCATGGTCCTGATT+GGG	-	chr2_3:12113330-12113349	Msa0278930:intron	55.0%
	AGTGGTGTTTGCGCCGCTTG+TGG	+	chr2_3:12114031-12114050	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr2_3	gene	12111442	12114511	12111442	ID=Msa0278930;Name=Msa0278930
chr2_3	mRNA	12111442	12114511	12111442	ID=Msa0278930-mRNA-1;Parent=Msa0278930;Name=Msa0278930-mRNA-1;_AED=0.24;_eAED=0.24;_QI=221\|1\|1\|1\|1\|1\|4\|260\|352
chr2_3	exon	12111442	12112177	12111442	ID=Msa0278930-mRNA-1:exon:5468;Parent=Msa0278930-mRNA-1
chr2_3	exon	12112454	12112619	12112454	ID=Msa0278930-mRNA-1:exon:5467;Parent=Msa0278930-mRNA-1
chr2_3	exon	12113619	12113810	12113619	ID=Msa0278930-mRNA-1:exon:5466;Parent=Msa0278930-mRNA-1
chr2_3	exon	12114066	12114511	12114066	ID=Msa0278930-mRNA-1:exon:5465;Parent=Msa0278930-mRNA-1
chr2_3	five_prime_UTR	12114291	12114511	12114291	ID=Msa0278930-mRNA-1:five_prime_utr;Parent=Msa0278930-mRNA-1
chr2_3	CDS	12114066	12114290	12114066	ID=Msa0278930-mRNA-1:cds;Parent=Msa0278930-mRNA-1
chr2_3	CDS	12113619	12113810	12113619	ID=Msa0278930-mRNA-1:cds;Parent=Msa0278930-mRNA-1
chr2_3	CDS	12112454	12112619	12112454	ID=Msa0278930-mRNA-1:cds;Parent=Msa0278930-mRNA-1
chr2_3	CDS	12111702	12112177	12111702	ID=Msa0278930-mRNA-1:cds;Parent=Msa0278930-mRNA-1
chr2_3	three_prime_UTR	12111442	12111701	12111442	ID=Msa0278930-mRNA-1:three_prime_utr;Parent=Msa0278930-mRNA-1

Gene Sequence

>Msa0278930

ATGAACTCTTCTTTTCATATCACATTGGCAGCTTTGTGCTGTGTAGTGGTTGTGCTTGGAGGGTTTCCCTTCTCTTCAAATGCACAACTTGATCCTAACTTCTACAAGGACACTTGTCCAAATGTCACTTCCATTGTCAAACAAGTCTTAGCAAACGTTTCTCAGACAGATCCTCGTATGCTTGCCAGTTTCATTAGGCTTCACTTTCATGATTGTTTTGTTCAAGGCTGCGATGCATCAATCTTGTTGAATGACACTGATACTATAGTGAGCGAGCAAGGAGCTGTGCCAAATAACAACTCAATAAGAGGTTTGGATGTTGTGAATCAAATCAAAGCCGCAGTGGAACTTGCTTGTCCTAGTGTTGTGTCTTGTGCTGATATTCTTGCACTTGGTGCTAATATTTCCTCAGTTCTGGCTCATGGTCCTGATTGGGAAGTTCCATTAGGAAGAAGAGATAGTTTGAATGCAAATCAAAGTCTTGCTAATTCAAGCCTTCCTGCTCCCCAATTTAATCTTAGTCAGCTAATATCCTCCTTTGCTGAACAAGGTCTCGACATTACTGATCTTGTTGCACTTTCAGGTGCTCATACAATTGGCAGAGGTCAATGTGGATTCTTCTTTGATCGATTATACAATTTCAACGATACTAGAAAACCCGATCCAACTCTTAACACAACCTACTTACAAACATTGAGAACAACATGTCCCATTGATGGACCTAATAGCACACTCACCAATTTGGACCCAACCACTCCAGATACATTCGACTCGAGCTACTACTCAAACCTAAGGATTCAAAAGGGCTTGTTTCAGAGTGACCAAGAATTGTTTTCCACAAGCGGCGCAAACACCACTGCCATTGTCAATAGTTTCAACAACAACCAAACTCTTTTCTTTGAAGCTTTTAAGGCTTCCATGATCAAAATGGGTAATATTGGAGTGTTAAATGAAACTCAAGGTGAAGTTAGAACACACTGTAACTTTGTTAATTCTGTTAGCCTTGCTACCAAAGTCACCAAAGATTCAGCAGAAGATGGTATTGTTAGCTCATTCTAA

Protein sequence

>Msa0278930

MNSSFHITLAALCCVVVVLGGFPFSSNAQLDPNFYKDTCPNVTSIVKQVLANVSQTDPRMLASFIRLHFHDCFVQGCDASILLNDTDTIVSEQGAVPNNNSIRGLDVVNQIKAAVELACPSVVSCADILALGANISSVLAHGPDWEVPLGRRDSLNANQSLANSSLPAPQFNLSQLISSFAEQGLDITDLVALSGAHTIGRGQCGFFFDRLYNFNDTRKPDPTLNTTYLQTLRTTCPIDGPNSTLTNLDPTTPDTFDSSYYSNLRIQKGLFQSDQELFSTSGANTTAIVNSFNNNQTLFFEAFKASMIKMGNIGVLNETQGEVRTHCNFVNSVSLATKVTKDSAEDGIVSSF*