AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0716480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0716480 MtrunA17_Chr5g0403921 98.133 750 14 0 1 750 1 750 0.0 1520
Msa0716480 MtrunA17_Chr4g0066741 45.556 540 254 10 177 710 181 686 9.25e-153 472
Msa0716480 MtrunA17_Chr2g0286291 40.658 669 318 14 50 710 92 689 1.88e-150 466
Msa0716480 MtrunA17_Chr5g0394201 44.094 508 251 8 178 675 357 841 1.23e-136 430
Msa0716480 MtrunA17_Chr1g0205891 43.574 498 249 8 178 665 370 845 1.22e-131 417
Msa0716480 MtrunA17_Chr4g0066651 40.801 549 291 10 178 708 983 1515 2.19e-125 413
Msa0716480 MtrunA17_Chr3g0095091 40.360 555 292 12 179 712 566 1102 1.00e-116 386
Msa0716480 MtrunA17_Chr5g0442141 39.823 565 301 11 179 722 612 1158 2.43e-115 382
Msa0716480 MtrunA17_Chr3g0137091 37.521 589 325 9 152 719 256 822 3.89e-109 362
Msa0716480 MtrunA17_Chr7g0232121 37.333 525 294 12 184 683 39 553 1.54e-99 327
Msa0716480 MtrunA17_Chr8g0348721 41.505 465 246 9 178 627 981 1434 2.14e-98 334
Msa0716480 MtrunA17_Chr4g0052341 40.040 502 261 11 179 663 740 1218 4.03e-96 328
Msa0716480 MtrunA17_Chr7g0248031 39.440 464 258 8 178 627 988 1442 1.99e-92 317
Msa0716480 MtrunA17_Chr1g0163011 34.310 580 268 18 155 656 175 719 1.36e-88 294
Msa0716480 MtrunA17_Chr1g0183681 30.471 594 342 14 115 659 316 887 7.96e-77 269
Msa0716480 MtrunA17_Chr7g0257101 34.269 499 272 12 51 501 416 906 3.15e-75 266
Msa0716480 MtrunA17_Chr7g0257101 45.455 220 101 5 484 698 1168 1373 2.30e-47 182
Msa0716480 MtrunA17_Chr8g0384531 32.887 523 286 13 184 657 384 890 2.78e-70 249
Msa0716480 MtrunA17_Chr1g0175191 39.233 339 176 9 173 506 510 823 1.23e-69 249
Msa0716480 MtrunA17_Chr1g0175191 46.409 181 94 2 494 674 1050 1227 6.22e-43 168
Msa0716480 MtrunA17_Chr4g0039561 93.333 105 7 0 461 565 41 145 2.77e-64 212
Msa0716480 MtrunA17_Chr5g0393461 31.008 516 299 12 184 654 184 687 9.27e-64 229
Msa0716480 MtrunA17_Chr4g0017211 29.693 522 309 11 184 655 1450 1963 4.15e-60 221
Msa0716480 MtrunA17_Chr4g0040301 28.681 523 282 13 212 655 18 528 7.29e-57 207
Msa0716480 MtrunA17_Chr7g0231521 43.868 212 107 6 184 385 39 248 1.34e-45 175
Msa0716480 MtrunA17_Chr7g0231521 34.553 246 147 3 450 683 231 474 1.17e-37 150
Msa0716480 MtrunA17_Chr8g0343171 95.312 64 3 0 462 525 42 105 8.48e-38 137
Msa0716480 MtrunA17_Chr7g0224051 25.624 761 438 28 10 677 375 1100 5.62e-31 130
Msa0716480 MtrunA17_Chr4g0069451 25.479 522 324 18 151 649 133 612 1.10e-30 128
Msa0716480 MtrunA17_Chr3g0114161 25.461 597 334 23 174 677 653 1231 4.91e-28 121
Msa0716480 MtrunA17_Chr2g0296421 24.897 486 326 12 181 637 508 983 9.15e-26 114
Msa0716480 MtrunA17_Chr7g0232971 26.761 426 245 11 312 702 904 1297 3.85e-25 112
Msa0716480 MtrunA17_Chr1g0190381 34.946 186 108 2 502 674 184 369 5.79e-25 109
Msa0716480 MtrunA17_Chr2g0320751 35.632 174 110 2 467 640 812 983 7.48e-25 111
Msa0716480 MtrunA17_Chr2g0320751 26.230 366 181 11 197 494 391 735 5.78e-21 98.6
Msa0716480 MtrunA17_Chr1g0191141 24.866 559 330 19 206 688 557 1101 1.06e-24 110
Msa0716480 MtrunA17_Chr7g0225791 24.366 513 301 16 206 655 752 1240 1.36e-24 110
Msa0716480 MtrunA17_Chr7g0233021 27.056 377 211 13 312 655 841 1186 2.01e-24 109
Msa0716480 MtrunA17_Chr1g0212331 42.029 138 77 2 524 661 887 1021 6.07e-24 108
Msa0716480 MtrunA17_Chr4g0024921 41.176 119 69 1 524 642 784 901 1.84e-23 106
Msa0716480 MtrunA17_Chr7g0233031 27.195 353 234 7 312 655 861 1199 2.44e-22 103
Msa0716480 MtrunA17_Chr7g0233001 25.205 365 235 10 312 655 128 475 1.11e-21 99.8
Msa0716480 MtrunA17_Chr1g0168031 34.868 152 98 1 499 650 980 1130 5.39e-21 99.0
Msa0716480 MtrunA17_Chr1g0168031 25.948 343 180 13 200 494 530 846 2.55e-19 93.6
Msa0716480 MtrunA17_Chr2g0281601 38.983 118 71 1 524 641 1150 1266 5.68e-21 99.0
Msa0716480 MtrunA17_Chr4g0047081 25.147 509 302 18 206 655 702 1190 6.94e-21 98.6
Msa0716480 MtrunA17_Chr8g0352361 23.377 539 325 17 181 665 358 862 1.13e-20 97.4
Msa0716480 MtrunA17_Chr7g0264371 24.954 541 343 15 132 651 227 725 1.48e-19 94.4
Msa0716480 MtrunA17_Chr1g0149871 42.593 108 59 3 157 263 217 322 1.31e-18 87.8
Msa0716480 MtrunA17_Chr7g0255821 23.975 317 190 10 205 494 251 543 2.60e-17 86.7
Msa0716480 MtrunA17_Chr7g0255821 38.655 119 72 1 524 641 668 786 6.70e-17 85.5
Msa0716480 MtrunA17_Chr7g0232991 32.051 156 102 1 520 671 475 630 4.03e-16 82.4
Msa0716480 MtrunA17_Chr5g0437621 31.868 182 112 3 507 677 1107 1287 7.03e-15 79.0
Msa0716480 MtrunA17_Chr2g0320781 31.618 136 88 2 507 637 94 229 1.56e-13 71.2
Msa0716480 MtrunA17_Chr5g0428401 27.429 175 115 3 507 671 1476 1648 2.49e-13 74.3
Msa0716480 MtrunA17_Chr3g0086111 34.286 105 68 1 524 628 552 655 4.04e-12 70.1
Msa0716480 MtrunA17_Chr3g0086111 24.419 258 169 11 184 431 187 428 5.49e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0716480 AT5G66750.1 71.182 753 192 10 11 750 24 764 0.0 1058
Msa0716480 AT3G06400.3 40.208 674 328 13 45 710 81 687 1.63e-150 466
Msa0716480 AT3G06400.1 40.208 674 328 13 45 710 81 687 1.67e-150 466
Msa0716480 AT3G06400.2 40.208 674 328 13 45 710 81 687 2.07e-150 466
Msa0716480 AT5G18620.2 45.556 540 254 10 177 710 187 692 9.00e-150 465
Msa0716480 AT5G18620.1 45.556 540 254 10 177 710 187 692 9.13e-150 464
Msa0716480 AT5G19310.2 45.079 508 246 8 178 675 116 600 1.41e-140 433
Msa0716480 AT5G19310.1 45.079 508 246 8 178 675 380 864 1.31e-137 432
Msa0716480 AT3G06010.1 43.701 508 254 8 178 675 397 882 4.16e-133 422
Msa0716480 AT2G28290.5 41.959 541 281 11 179 708 750 1268 5.18e-125 413
Msa0716480 AT2G28290.1 41.959 541 281 11 179 708 749 1267 6.44e-125 412
Msa0716480 AT2G28290.3 41.959 541 281 11 179 708 749 1267 7.08e-125 412
Msa0716480 AT2G28290.4 41.959 541 281 11 179 708 749 1267 7.08e-125 412
Msa0716480 AT2G28290.6 41.959 541 281 11 179 708 750 1268 7.21e-125 412
Msa0716480 AT2G28290.2 41.959 541 281 11 179 708 749 1267 7.78e-125 412
Msa0716480 AT2G13370.1 40.853 563 289 13 179 719 620 1160 2.16e-116 386
Msa0716480 AT2G13370.2 40.853 563 289 13 179 719 620 1160 2.16e-116 386
Msa0716480 AT2G13370.3 40.853 563 289 13 179 719 620 1160 2.16e-116 386
Msa0716480 AT2G44980.1 40.862 487 253 10 184 655 51 517 8.83e-110 353
Msa0716480 AT2G44980.3 40.040 502 254 12 184 655 51 535 2.08e-109 353
Msa0716480 AT2G25170.1 38.382 581 306 11 156 712 246 798 4.40e-109 362
Msa0716480 AT2G25170.4 38.382 581 306 11 156 712 246 798 4.40e-109 362
Msa0716480 AT2G25170.2 38.382 581 306 11 156 712 263 815 7.46e-109 362
Msa0716480 AT2G25170.3 38.382 581 306 11 156 712 272 824 7.61e-109 362
Msa0716480 AT4G31900.1 37.699 565 311 11 163 720 204 734 5.20e-108 357
Msa0716480 AT4G31900.2 37.699 565 311 11 163 720 163 693 5.59e-108 355
Msa0716480 AT2G44980.2 40.159 503 253 13 184 655 51 536 7.78e-108 349
Msa0716480 AT4G31900.3 37.699 565 311 11 163 720 204 734 1.22e-107 355
Msa0716480 AT2G46020.2 40.385 468 248 9 178 627 975 1429 1.83e-96 329
Msa0716480 AT2G46020.3 40.385 468 248 9 178 627 975 1429 1.83e-96 329
Msa0716480 AT2G46020.4 40.385 468 248 9 178 627 975 1429 1.83e-96 329
Msa0716480 AT2G46020.5 40.385 468 247 9 178 627 975 1428 4.76e-96 328
Msa0716480 AT2G46020.1 40.385 468 247 9 178 627 975 1428 4.76e-96 328
Msa0716480 AT2G46020.6 40.385 468 247 9 178 627 975 1428 4.76e-96 328
Msa0716480 AT5G44800.1 41.235 502 255 12 179 663 684 1162 7.54e-96 327
Msa0716480 AT2G02090.1 34.846 551 259 15 184 658 213 739 4.40e-88 294
Msa0716480 AT2G18760.4 32.094 511 298 9 183 659 384 879 2.89e-76 268
Msa0716480 AT2G18760.1 32.094 511 298 9 183 659 384 879 2.89e-76 268
Msa0716480 AT2G18760.2 32.094 511 298 9 183 659 384 879 2.89e-76 268
Msa0716480 AT2G18760.7 32.094 511 298 9 183 659 384 879 2.89e-76 268
Msa0716480 AT2G18760.5 32.094 511 298 9 183 659 384 879 2.89e-76 268
Msa0716480 AT2G18760.6 32.094 511 298 9 183 659 384 879 2.89e-76 268
Msa0716480 AT2G18760.3 32.094 511 298 9 183 659 443 938 5.29e-76 268
Msa0716480 AT3G57300.3 35.211 497 256 13 45 495 422 898 1.19e-75 266
Msa0716480 AT3G57300.1 35.211 497 256 13 45 495 422 898 1.44e-75 267
Msa0716480 AT3G57300.1 47.090 189 92 2 500 688 1200 1380 2.94e-44 172
Msa0716480 AT3G57300.4 35.211 497 256 13 45 495 422 898 1.44e-75 267
Msa0716480 AT3G57300.4 47.090 189 92 2 500 688 1200 1380 2.94e-44 172
Msa0716480 AT3G57300.2 33.208 530 255 13 45 495 422 931 8.70e-72 256
Msa0716480 AT3G57300.2 47.090 189 92 2 500 688 1233 1413 4.39e-44 172
Msa0716480 AT3G12810.2 40.506 316 172 6 173 486 521 822 8.02e-69 247
Msa0716480 AT3G12810.2 45.856 181 95 2 494 674 1059 1236 7.58e-43 169
Msa0716480 AT3G12810.1 40.506 316 172 6 173 486 525 826 8.81e-69 247
Msa0716480 AT3G12810.1 45.856 181 95 2 494 674 1063 1240 7.45e-43 169
Msa0716480 AT5G63950.1 31.380 529 299 12 184 666 377 887 1.72e-68 244
Msa0716480 AT1G03750.1 28.315 558 310 13 176 655 131 676 6.71e-68 240
Msa0716480 AT5G63950.2 31.274 518 297 11 184 666 377 870 6.24e-65 234
Msa0716480 AT3G54280.1 31.309 527 297 17 183 655 1450 1965 6.29e-62 227
Msa0716480 AT3G54280.2 31.309 527 297 17 183 655 1481 1996 7.02e-62 226
Msa0716480 AT3G19210.3 30.528 511 308 10 184 654 180 683 9.21e-61 219
Msa0716480 AT3G19210.1 30.528 511 308 10 184 654 180 683 2.10e-60 220
Msa0716480 AT3G19210.2 29.941 511 309 10 184 654 180 681 8.12e-58 212
Msa0716480 AT1G02670.6 26.161 646 326 23 107 641 23 628 2.42e-43 167
Msa0716480 AT1G02670.3 26.633 597 299 21 152 641 91 655 5.97e-43 166
Msa0716480 AT1G02670.5 26.066 633 317 23 107 628 23 615 1.81e-41 161
Msa0716480 AT1G02670.2 26.541 584 290 21 152 628 91 642 4.39e-41 160
Msa0716480 AT5G05130.1 25.000 548 281 17 236 682 361 879 6.40e-37 149
Msa0716480 AT1G48310.1 26.230 488 307 13 174 648 162 609 3.16e-32 134
Msa0716480 AT1G48310.3 26.337 505 318 14 174 664 162 626 3.48e-32 133
Msa0716480 AT1G48310.2 26.230 488 307 13 174 648 167 614 3.71e-32 133
Msa0716480 AT1G05490.1 25.094 534 323 12 206 679 860 1376 9.41e-29 124
Msa0716480 AT3G16600.1 23.744 577 293 18 170 641 39 573 1.88e-28 122
Msa0716480 AT3G24340.1 24.806 516 319 15 195 667 601 1090 1.76e-25 113
Msa0716480 AT5G07810.1 24.131 489 314 20 174 628 194 659 1.66e-24 110
Msa0716480 AT3G20010.3 44.538 119 65 1 524 642 628 745 4.65e-24 108
Msa0716480 AT3G20010.2 44.538 119 65 1 524 642 603 720 5.39e-24 108
Msa0716480 AT3G20010.1 44.538 119 65 1 524 642 894 1011 6.84e-24 108
Msa0716480 AT3G20010.5 44.538 119 65 1 524 642 894 1011 6.84e-24 108
Msa0716480 AT3G20010.7 44.538 119 65 1 524 642 894 1011 6.84e-24 108
Msa0716480 AT1G08600.1 32.547 212 123 3 506 697 1094 1305 9.25e-24 108
Msa0716480 AT1G08600.4 32.547 212 123 3 506 697 1115 1326 9.55e-24 108
Msa0716480 AT1G08600.3 32.547 212 123 3 506 697 1115 1326 9.55e-24 108
Msa0716480 AT1G08600.2 32.547 212 123 3 506 697 1115 1326 9.55e-24 108
Msa0716480 AT5G43530.1 42.017 119 68 1 522 640 1127 1244 8.43e-23 105
Msa0716480 AT5G43530.1 24.927 341 189 10 200 494 678 997 2.29e-20 97.4
Msa0716480 AT1G50410.2 42.373 118 67 1 524 641 828 944 1.61e-22 103
Msa0716480 AT1G50410.1 42.373 118 67 1 524 641 828 944 1.61e-22 103
Msa0716480 AT1G50410.3 42.373 118 67 1 524 641 828 944 1.61e-22 103
Msa0716480 AT1G05120.1 39.496 119 71 1 524 642 682 799 4.31e-22 102
Msa0716480 AT1G05120.1 30.435 184 86 8 157 314 113 280 8.32e-12 69.3
Msa0716480 AT1G11100.3 40.678 118 69 1 524 641 974 1090 4.37e-22 102
Msa0716480 AT1G11100.5 40.678 118 69 1 524 641 930 1046 4.60e-22 102
Msa0716480 AT1G11100.5 22.006 359 196 12 187 482 402 739 7.47e-13 72.8
Msa0716480 AT1G05120.2 39.496 119 71 1 524 642 725 842 4.89e-22 102
Msa0716480 AT1G05120.2 30.435 184 86 8 157 314 156 323 1.24e-11 68.9
Msa0716480 AT3G42670.2 24.680 547 320 18 206 677 709 1238 5.05e-22 102
Msa0716480 AT3G42670.3 24.680 547 320 18 206 677 709 1238 5.05e-22 102
Msa0716480 AT3G42670.1 24.680 547 320 18 206 677 709 1238 5.05e-22 102
Msa0716480 AT3G42670.4 24.680 547 320 18 206 677 711 1240 5.23e-22 102
Msa0716480 AT1G11100.2 40.678 118 69 1 524 641 1116 1232 5.63e-22 102
Msa0716480 AT1G11100.4 40.678 118 69 1 524 641 1117 1233 5.78e-22 102
Msa0716480 AT1G11100.1 40.678 118 69 1 524 641 1073 1189 5.83e-22 102
Msa0716480 AT1G11100.1 22.006 359 196 12 187 482 545 882 5.73e-13 73.2
Msa0716480 AT5G22750.1 40.476 126 74 1 515 640 872 996 7.93e-22 102
Msa0716480 AT5G22750.1 24.466 421 226 14 141 494 353 748 1.04e-20 98.2
Msa0716480 AT2G21450.3 23.502 651 392 22 48 637 59 664 8.79e-22 101
Msa0716480 AT2G21450.2 23.502 651 392 22 48 637 157 762 8.89e-22 101
Msa0716480 AT2G16390.2 23.646 554 341 21 144 637 301 832 1.03e-21 101
Msa0716480 AT2G16390.1 23.466 554 342 20 144 637 298 829 1.10e-21 101
Msa0716480 AT2G21450.1 23.502 651 392 22 48 637 150 755 1.10e-21 101
Msa0716480 AT5G20420.1 24.863 547 320 18 206 677 714 1244 1.18e-21 101
Msa0716480 AT1G02670.4 27.481 393 195 16 152 485 91 452 2.05e-21 99.4
Msa0716480 AT1G02670.1 38.136 118 72 1 524 641 527 643 3.97e-21 99.0
Msa0716480 AT1G02670.1 30.345 290 152 12 107 368 61 328 2.04e-20 96.7
Msa0716480 AT1G61140.3 38.983 118 71 1 524 641 967 1083 4.38e-21 99.8
Msa0716480 AT1G02670.7 38.136 118 72 1 524 641 516 632 4.52e-21 99.0
Msa0716480 AT1G02670.7 33.051 236 130 9 152 368 91 317 2.95e-20 96.3
Msa0716480 AT1G61140.1 38.983 118 71 1 524 641 1125 1241 5.91e-21 99.4
Msa0716480 AT2G40770.2 31.783 129 78 2 524 642 1451 1579 5.89e-12 70.1
Msa0716480 AT2G40770.1 31.783 129 78 2 524 642 1451 1579 5.89e-12 70.1
Msa0716480 AT2G40770.3 31.783 129 78 2 524 642 1451 1579 5.89e-12 70.1

Find 183 sgRNAs with CRISPR-Local

Find 439 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTATTACTAGAGGGAATTT+TGG 0.168192 5_1:-9905067 None:intergenic
TCCAACAAGTCTTAATAATT+TGG 0.194961 5_1:+9906673 Msa0716480:CDS
TGAGACACTGGAGAAATATT+TGG 0.241336 5_1:+9906501 Msa0716480:CDS
GCTCCTTAGTTTGTTGGATA+TGG 0.241351 5_1:+9909438 Msa0716480:three_prime_UTR
CAAAGCCTGTTCATGTTTAC+AGG 0.245028 5_1:+9908201 Msa0716480:CDS
GTCGTTCTTCACATTGTTCT+TGG 0.264553 5_1:-9903401 None:intergenic
TCCACCAGGGCTGGTGGGTT+GGG 0.265341 5_1:+9907989 Msa0716480:CDS
CCAAGCTTCATTCAATTCTT+AGG 0.276043 5_1:+9906359 Msa0716480:CDS
GAGAAAGAAACCCAATTGTT+TGG 0.304226 5_1:-9904767 None:intergenic
GAATCCTCAAATGGATTTAC+AGG 0.307703 5_1:+9908148 Msa0716480:intron
ACTCTACTCAGAGTTTCTTT+TGG 0.310547 5_1:+9903792 Msa0716480:CDS
CTCTTAGAATCAGTCTTTGA+TGG 0.316379 5_1:+9906731 Msa0716480:CDS
ATGATGCTAAGAAGTGTTTA+AGG 0.317013 5_1:+9905110 Msa0716480:CDS
TTCCACCAGGGCTGGTGGGT+TGG 0.318371 5_1:+9907988 Msa0716480:CDS
ATTGGATGAATGAGATTAAT+AGG 0.319332 5_1:+9904853 Msa0716480:CDS
AGAGGAGCAATTATCATATA+TGG 0.330903 5_1:-9904816 None:intergenic
AAGAAGAGAAAATGAGATTC+TGG 0.332887 5_1:-9903257 None:intergenic
TCACAGATACCTCTTCTTCT+AGG 0.335211 5_1:-9903453 None:intergenic
TCAATTGCTCGACCGATTGC+TGG 0.340852 5_1:+9906997 Msa0716480:CDS
GCGCACAAAGCCTTCCCTTA+TGG 0.344214 5_1:+9908422 Msa0716480:CDS
ATATTAGGAAGAGGATGTTT+TGG 0.349530 5_1:+9908927 Msa0716480:intron
TTGATTTCCTTGTGGCAAAA+TGG 0.351243 5_1:+9904699 Msa0716480:CDS
TTCTTTAGATCTTGTAATCA+TGG 0.352463 5_1:-9904553 None:intergenic
ACCAAATTATTAAGACTTGT+TGG 0.352586 5_1:-9906674 None:intergenic
GGGAAGACAATCCAAACAAT+TGG 0.358044 5_1:+9904756 Msa0716480:CDS
TAAGCTGCTCCTTAGTTTGT+TGG 0.359492 5_1:+9909432 Msa0716480:three_prime_UTR
ATAGCTCAGCCAAGTTATTC+TGG 0.362438 5_1:-9905373 None:intergenic
GCTTCAGGGAAAAGCCAAAA+AGG 0.366302 5_1:+9904521 Msa0716480:intron
GCCTTCCCTTATGGATGAAA+TGG 0.367031 5_1:+9908431 Msa0716480:CDS
GACCAAAGTGCTAGATATAA+TGG 0.367410 5_1:+9907160 Msa0716480:CDS
CTTGCTGATCAAATGGGTCT+TGG 0.368472 5_1:+9904735 Msa0716480:CDS
TCAAGAGATGAGAATATATC+AGG 0.373285 5_1:-9905419 None:intergenic
AAGAAAGATTCTGCAGTTGC+TGG 0.373653 5_1:-9907963 None:intergenic
ATTAATCTCATTCATCCAAT+TGG 0.375683 5_1:-9904850 None:intergenic
TTCGAAGTTTGCAGGATTGA+TGG 0.389977 5_1:+9907206 Msa0716480:CDS
TGATTCACAGTTTAATAAGT+TGG 0.390841 5_1:+9903747 Msa0716480:CDS
CTACATCTAGTTCCGTTAGT+AGG 0.399297 5_1:-9909321 None:intergenic
CTCTATCAACCCTCTCCAAT+TGG 0.399370 5_1:+9904835 Msa0716480:CDS
GAAGGAAGTGGAGGTGAAAT+CGG 0.400005 5_1:+9903597 Msa0716480:intron
TTCTTTCCACCAGGGCTGGT+GGG 0.401539 5_1:+9907984 Msa0716480:CDS
TTTCTTCTTTCCACCAGGGC+TGG 0.404452 5_1:+9907980 Msa0716480:CDS
AAAAGGGTTTCGAAGTTTGC+AGG 0.409783 5_1:+9907198 Msa0716480:CDS
TTTCTCAGTTCTTTCTTCCT+CGG 0.414953 5_1:-9904604 None:intergenic
GTGGTGATGCCAACTGCGGC+AGG 0.417009 5_1:+9909114 Msa0716480:CDS
TTGCTGATCAAATGGGTCTT+GGG 0.417375 5_1:+9904736 Msa0716480:CDS
AAACCTCCATTTCATCCATA+AGG 0.417476 5_1:-9908437 None:intergenic
GAGCTGATGCCTTTACTAAC+TGG 0.418049 5_1:+9904636 Msa0716480:CDS
TGGGATTCTTGCTGATCAAA+TGG 0.425534 5_1:+9904728 Msa0716480:CDS
CTTCTTTCCACCAGGGCTGG+TGG 0.426111 5_1:+9907983 Msa0716480:CDS
AACTGTGAATCATTCAGATT+CGG 0.441376 5_1:-9903736 None:intergenic
GGAGGTGAAATCGGAGGAAG+AGG 0.441683 5_1:+9903606 Msa0716480:CDS
TTCATCCTACGCAACAGAAA+TGG 0.442959 5_1:-9906382 None:intergenic
GGAAGACAATCCAAACAATT+GGG 0.444585 5_1:+9904757 Msa0716480:CDS
AGTTTGCAGGATTGATGGTT+CGG 0.447412 5_1:+9907211 Msa0716480:CDS
GCGAGCCTGTAAACATGAAC+AGG 0.450451 5_1:-9908206 None:intergenic
AGTTTACTCTCTTCTTCATC+CGG 0.450638 5_1:-9904182 None:intergenic
GTTCGGTGAAGCTGGATGAT+AGG 0.450647 5_1:+9907228 Msa0716480:CDS
TCATCTAAAATCGAAAGGAT+TGG 0.454533 5_1:+9904788 Msa0716480:CDS
CCTTAGTTTGTTGGATATGG+TGG 0.455529 5_1:+9909441 Msa0716480:three_prime_UTR
TGAAGACCTGGAGAAGCTCT+TGG 0.461434 5_1:+9909008 Msa0716480:CDS
GATTGATGGTTCGGTGAAGC+TGG 0.464329 5_1:+9907220 Msa0716480:CDS
TTGTGGCAAAATGGATTGAA+TGG 0.465688 5_1:+9904708 Msa0716480:CDS
AACCTCCATTTCATCCATAA+GGG 0.465902 5_1:-9908436 None:intergenic
GAATCTTTCTTCTTTCCACC+AGG 0.466276 5_1:+9907975 Msa0716480:CDS
TCAAATGGATTTACAGGCCA+TGG 0.467434 5_1:+9908154 Msa0716480:CDS
TATTCCCAACCCACCAGCCC+TGG 0.468568 5_1:-9907993 None:intergenic
ATTACATCTCAAACCACAAA+AGG 0.469535 5_1:-9909217 None:intergenic
TGAGCATCAGAAGAACTTGC+AGG 0.472788 5_1:+9906465 Msa0716480:CDS
GGTGATGCCAACTGCGGCAG+GGG 0.474198 5_1:+9909116 Msa0716480:CDS
CTTAGTTTGTTGGATATGGT+GGG 0.475583 5_1:+9909442 Msa0716480:three_prime_UTR
TCCAGGCCCTTTAAGAGAAA+AGG 0.476786 5_1:-9909085 None:intergenic
ATCCATTATATCTAGCACTT+TGG 0.479735 5_1:-9907162 None:intergenic
TGCGGGTGAACAAGAGAAAC+CGG 0.480040 5_1:+9904163 Msa0716480:CDS
TTTCTCTTAAAGGGCCTGGA+TGG 0.482002 5_1:+9909088 Msa0716480:CDS
GGCATCACCACTTCCCATCC+AGG 0.482270 5_1:-9909102 None:intergenic
CAAATAGCCGCTCCAGCAAT+CGG 0.485889 5_1:-9907009 None:intergenic
CTGTCGGGAAAGAGCACTAC+TGG 0.491725 5_1:+9906203 Msa0716480:CDS
TTACCATGGTAGATAACAGC+AGG 0.494363 5_1:-9904992 None:intergenic
CAGTAGTGCTCTTTCCCGAC+AGG 0.496157 5_1:-9906202 None:intergenic
GTATTCTTTATGACAGTGAC+TGG 0.499135 5_1:+9908038 Msa0716480:CDS
GGGATTCTTGCTGATCAAAT+GGG 0.499534 5_1:+9904729 Msa0716480:CDS
TGGAGCAACAATGGAAGAGT+TGG 0.503178 5_1:+9906223 Msa0716480:CDS
AAGACTGATTCTAAGAGGTC+AGG 0.504261 5_1:-9906725 None:intergenic
CTTTCTCATCTAAAATCGAA+AGG 0.509899 5_1:+9904783 Msa0716480:CDS
AGTGTTTAAGGTCATACAGT+TGG 0.511185 5_1:+9905122 Msa0716480:CDS
TCTTCTTCTAGGACTGAAGT+TGG 0.512151 5_1:-9903442 None:intergenic
ATGGCCTGTAAATCCATTTG+AGG 0.512435 5_1:-9908152 None:intergenic
AGAGAAAGGACAATTTCATC+AGG 0.513981 5_1:+9908398 Msa0716480:CDS
ATCAACTGAAGGGTGTTAAG+TGG 0.517699 5_1:+9904676 Msa0716480:CDS
CTCTCTGATATTTGTTACCA+TGG 0.519080 5_1:-9905006 None:intergenic
GGATGAAGAAGAGAGTAAAC+TGG 0.520666 5_1:+9904184 Msa0716480:CDS
GAAGTTGGTGATTCCACTGC+AGG 0.522177 5_1:-9903427 None:intergenic
TGTACTCCAGAATCCTCAAA+TGG 0.523054 5_1:+9908139 Msa0716480:intron
CCACCATATCCAACAAACTA+AGG 0.523341 5_1:-9909441 None:intergenic
CTTCTGATGCTCAGTCATGT+TGG 0.524860 5_1:-9906455 None:intergenic
CTCATTCATCCAATTGGAGA+GGG 0.526511 5_1:-9904844 None:intergenic
ATGGATAGATGTCACAGAAT+CGG 0.529752 5_1:+9908173 Msa0716480:CDS
AAATGTGAAGACTGAGGATG+TGG 0.530087 5_1:+9904575 Msa0716480:CDS
TGCGATCCAAGAGCTTCTCC+AGG 0.531714 5_1:-9909014 None:intergenic
GAGCATGTGGTGATAGAGAA+AGG 0.531994 5_1:+9908384 Msa0716480:CDS
CTAAAATCGAAAGGATTGGA+TGG 0.533235 5_1:+9904792 Msa0716480:CDS
TTCTCTTAAAGGGCCTGGAT+GGG 0.540931 5_1:+9909089 Msa0716480:CDS
TAAAGGGCCTGGATGGGAAG+TGG 0.541437 5_1:+9909095 Msa0716480:CDS
GTGGGACTGCATTGATTCAA+AGG 0.541607 5_1:+9909460 Msa0716480:three_prime_UTR
TTAGGCCATTTCTGTTGCGT+AGG 0.541737 5_1:+9906377 Msa0716480:CDS
CCTAAGAATTGAATGAAGCT+TGG 0.544169 5_1:-9906359 None:intergenic
CATCAAAGACTGATTCTAAG+AGG 0.545515 5_1:-9906730 None:intergenic
ATTGAAATCTTATCAACTGA+AGG 0.547286 5_1:+9904665 Msa0716480:CDS
AACTTCAGTCCTAGAAGAAG+AGG 0.548276 5_1:+9903444 Msa0716480:CDS
TGCTGGAGCGGCTATTTGCA+CGG 0.548438 5_1:+9907014 Msa0716480:CDS
AGAATAACTTGGCTGAGCTA+TGG 0.550121 5_1:+9905375 Msa0716480:CDS
TACACCGCTCCAGAATAACT+TGG 0.551035 5_1:+9905364 Msa0716480:CDS
CTCTTGAAGAATTTGAGTCA+TGG 0.551617 5_1:+9905435 Msa0716480:CDS
GGGAAATTAGCTGTTGAGAG+TGG 0.553051 5_1:-9909148 None:intergenic
AGCTCGTGCAAAGGAAGAAG+AGG 0.554090 5_1:+9903696 Msa0716480:CDS
GAAGTATCTTGTTGTTGATG+AGG 0.554954 5_1:+9905144 Msa0716480:CDS
TGGTTGTATCATTGAAGTCC+TGG 0.555540 5_1:-9907943 None:intergenic
TGTGGCAAAATGGATTGAAT+GGG 0.556206 5_1:+9904709 Msa0716480:CDS
CAATTGGAGAGGGTTGATAG+AGG 0.557093 5_1:-9904834 None:intergenic
TAGATAACAGCAGGGAGCGT+TGG 0.559287 5_1:-9904983 None:intergenic
TGCTCGACCGATTGCTGGAG+CGG 0.560952 5_1:+9907002 Msa0716480:CDS
AAACATATGCCTAGAACAGT+TGG 0.561393 5_1:+9905043 Msa0716480:CDS
TTCCCTTATGGATGAAATGG+AGG 0.562107 5_1:+9908434 Msa0716480:CDS
GAGCACTACTGGAGCAACAA+TGG 0.565222 5_1:+9906214 Msa0716480:CDS
CATCCTCACTAATTTGCAGT+TGG 0.566871 5_1:-9905300 None:intergenic
TCCATTTCATCCATAAGGGA+AGG 0.568951 5_1:-9908432 None:intergenic
CATAAGAAGTTATTACTAGA+GGG 0.573729 5_1:-9905075 None:intergenic
TGAAGCTGGATGATAGGAAA+CGG 0.574761 5_1:+9907234 Msa0716480:CDS
TCATTTAATTAATGAGACAC+TGG 0.575085 5_1:+9906489 Msa0716480:CDS
TTGGACAAGAAACGATCAGT+TGG 0.576949 5_1:+9906520 Msa0716480:CDS
TCCCAACCCACCAGCCCTGG+TGG 0.577934 5_1:-9907990 None:intergenic
TTGAAATCTTATCAACTGAA+GGG 0.577947 5_1:+9904666 Msa0716480:CDS
TGTTAATAGTGTTGTGTGAG+TGG 0.581480 5_1:-9903198 None:intergenic
ACAAGCAAATATGAATTGAG+TGG 0.583572 5_1:-9909406 None:intergenic
AATCTTTCTTCTTTCCACCA+GGG 0.584100 5_1:+9907976 Msa0716480:CDS
GCTGGATGATAGGAAACGGC+AGG 0.584808 5_1:+9907238 Msa0716480:CDS
CCTCTGACAATTGACATCAC+TGG 0.585747 5_1:-9909266 None:intergenic
TCATAAGAAGTTATTACTAG+AGG 0.585764 5_1:-9905076 None:intergenic
ATTCTGGAAGAGAAGATGAA+AGG 0.590006 5_1:-9903241 None:intergenic
AAGAACTGAGAAAGAGCAGA+GGG 0.591530 5_1:+9904614 Msa0716480:CDS
AATTGTCAGAGGTAATGTCC+TGG 0.592810 5_1:+9909277 Msa0716480:three_prime_UTR
GTGATGCCAACTGCGGCAGG+GGG 0.593834 5_1:+9909117 Msa0716480:CDS
ATCAGAGAGATGAAATCAGA+AGG 0.593838 5_1:+9905020 Msa0716480:CDS
TGGTGATGCCAACTGCGGCA+GGG 0.594432 5_1:+9909115 Msa0716480:CDS
GAAAATGGATGATATTACAA+TGG 0.599478 5_1:+9903816 Msa0716480:CDS
AGGTTCTGATCTTCAGTCAG+TGG 0.599711 5_1:+9907138 Msa0716480:intron
AGATATTAGTGATGAAGACC+TGG 0.600162 5_1:+9908996 Msa0716480:CDS
TATTCTTTATGACAGTGACT+GGG 0.603626 5_1:+9908039 Msa0716480:CDS
TCTCATTCATCCAATTGGAG+AGG 0.606036 5_1:-9904845 None:intergenic
TAAAATCGAAAGGATTGGAT+GGG 0.606925 5_1:+9904793 Msa0716480:CDS
CTCCCTGCTGTTATCTACCA+TGG 0.607078 5_1:+9904989 Msa0716480:CDS
CTGATGCCTTTACTAACTGG+TGG 0.607326 5_1:+9904639 Msa0716480:CDS
CGCTACTGCACAATCAGTAG+AGG 0.608250 5_1:+9908226 Msa0716480:CDS
GGAAGTGGAGGTGAAATCGG+AGG 0.610191 5_1:+9903600 Msa0716480:intron
TCAATTATCTCATTCACAGG+AGG 0.610756 5_1:-9906959 None:intergenic
TGTGTATGTGAAGGAAGTGG+AGG 0.617706 5_1:+9903588 Msa0716480:intron
TTAAGTGGTTGATTTCCTTG+TGG 0.620476 5_1:+9904691 Msa0716480:CDS
CAAGTTGAAGCTTGAGCATG+TGG 0.621259 5_1:+9908371 Msa0716480:CDS
GTCAGAGGTAATGTCCTGGA+GGG 0.623098 5_1:+9909281 Msa0716480:three_prime_UTR
TGTACCGAAAACAATGGCTG+AGG 0.624038 5_1:+9903654 Msa0716480:CDS
GTTGCTGAAAGCTCGTGCAA+AGG 0.624525 5_1:+9903687 Msa0716480:CDS
GATTCTGTGACATCTATCCA+TGG 0.629171 5_1:-9908171 None:intergenic
AAAGAACTGAGAAAGAGCAG+AGG 0.631747 5_1:+9904613 Msa0716480:CDS
TGTAGAAATGAAGCAACTTG+TGG 0.631956 5_1:+9909339 Msa0716480:three_prime_UTR
ATGCCAACTGCAAATTAGTG+AGG 0.632322 5_1:+9905297 Msa0716480:CDS
CTGATTCTAAGAGGTCAGGA+TGG 0.643894 5_1:-9906721 None:intergenic
GAAGAACGACGATCCTGCAG+TGG 0.650078 5_1:+9903414 Msa0716480:CDS
GCTATTTGCACGGAATCACA+AGG 0.650119 5_1:+9907024 Msa0716480:CDS
TAAAGAAAATGTGAAGACTG+AGG 0.654292 5_1:+9904569 Msa0716480:CDS
CCAGTGATGTCAATTGTCAG+AGG 0.657399 5_1:+9909266 Msa0716480:three_prime_UTR
TCAGCCAAGTTATTCTGGAG+CGG 0.671648 5_1:-9905368 None:intergenic
CTATTCACAAATCCAGTGTG+TGG 0.671949 5_1:+9909380 Msa0716480:three_prime_UTR
TGTCAGAGGTAATGTCCTGG+AGG 0.681189 5_1:+9909280 Msa0716480:three_prime_UTR
ATGTTGAGCTAATGTTGCCA+CGG 0.684746 5_1:+9906410 Msa0716480:CDS
ATCGCTTGTACCGAAAACAA+TGG 0.696297 5_1:+9903648 Msa0716480:CDS
TCGAGATGAAGAAACCGCTG+AGG 0.697243 5_1:+9908957 Msa0716480:CDS
ATTGAGTGGATACCACACAC+TGG 0.698123 5_1:-9909392 None:intergenic
ATGATGATTTACTAAACCAG+CGG 0.702382 5_1:-9909503 None:intergenic
TACAAGTGTCAGCTGCAGTG+AGG 0.704555 5_1:-9908018 None:intergenic
TGAGGATGTGGATTTGACCG+AGG 0.709493 5_1:+9904587 Msa0716480:CDS
TACCATGGTAGATAACAGCA+GGG 0.711491 5_1:-9904991 None:intergenic
GGAAGTGGTGATGCCAACTG+CGG 0.740252 5_1:+9909110 Msa0716480:CDS
ACTCACAGTATTGCATTGTG+AGG 0.751205 5_1:-9904246 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAAGAAAATTCAAAAA+TGG + chr5_1:9907434-9907453 Msa0716480:intron 10.0%
!!! AAATGTAAAGAACATTTTTA+GGG - chr5_1:9903308-9903327 None:intergenic 15.0%
!!! AAAATGTAAAGAACATTTTT+AGG - chr5_1:9903309-9903328 None:intergenic 15.0%
!!! AAAATTTTTCAGAAAGTAAA+GGG + chr5_1:9904087-9904106 Msa0716480:intron 15.0%
!! TTTCCTTAATAAATGTAAAT+AGG + chr5_1:9904954-9904973 Msa0716480:intron 15.0%
!! AAACCTATTTACATTTATTA+AGG - chr5_1:9904960-9904979 None:intergenic 15.0%
!! TTTCATTTAAGTAAATTCAT+TGG - chr5_1:9905807-9905826 None:intergenic 15.0%
!! GCATAAAATAAGAAAAATAA+AGG - chr5_1:9906158-9906177 None:intergenic 15.0%
!!! AATTTTTCATTTGAAAGAAA+GGG + chr5_1:9906558-9906577 Msa0716480:intron 15.0%
!! ATATTAACAAAAGTAATTTG+AGG - chr5_1:9907304-9907323 None:intergenic 15.0%
!!! GTTTTTATGATAATTTGATA+AGG + chr5_1:9907483-9907502 Msa0716480:intron 15.0%
!! TACAAATTGTTAAAATTCTA+TGG + chr5_1:9908697-9908716 Msa0716480:intron 15.0%
!!! TAATTTTGATTATTGAGATT+TGG + chr5_1:9908850-9908869 Msa0716480:intron 15.0%
!!! ATTTTGATGTGTTTCTAAAA+TGG + chr5_1:9903559-9903578 Msa0716480:intron 20.0%
!!! TTTTGATGTGTTTCTAAAAT+GGG + chr5_1:9903560-9903579 Msa0716480:intron 20.0%
!! ACAAAACAAAAACACAAAAA+GGG - chr5_1:9903857-9903876 None:intergenic 20.0%
!! AACAAAACAAAAACACAAAA+AGG - chr5_1:9903858-9903877 None:intergenic 20.0%
!!! GTTTTGTTTTTACTTTTTTC+CGG + chr5_1:9903870-9903889 Msa0716480:intron 20.0%
!! ACTAAAATATAGTTTATGAC+AGG + chr5_1:9903937-9903956 Msa0716480:intron 20.0%
!!! CTTAAAATAACACCAATTTT+TGG + chr5_1:9904052-9904071 Msa0716480:intron 20.0%
!!! CTATTTTCATTTCCAAAAAT+TGG - chr5_1:9904067-9904086 None:intergenic 20.0%
!!! GAAAATTTTTCAGAAAGTAA+AGG + chr5_1:9904086-9904105 Msa0716480:intron 20.0%
!!! AAATTTTTCAGAAAGTAAAG+GGG + chr5_1:9904088-9904107 Msa0716480:intron 20.0%
!! AATTCCTAGACAAAATAATA+CGG - chr5_1:9904285-9904304 None:intergenic 20.0%
!!! ATTTTATTTTTTGTAACCTC+AGG + chr5_1:9905259-9905278 Msa0716480:intron 20.0%
!!! TTTTATTTTTTGTAACCTCA+GGG + chr5_1:9905260-9905279 Msa0716480:intron 20.0%
!! TTATTTCCTACTATATTGTT+CGG + chr5_1:9905575-9905594 Msa0716480:intron 20.0%
!! TGTTATCTACTTTGTTAATT+AGG - chr5_1:9905667-9905686 None:intergenic 20.0%
!!! AATGTCTTTTATCATATCAA+AGG + chr5_1:9905728-9905747 Msa0716480:intron 20.0%
!!! ATGTCTTTTATCATATCAAA+GGG + chr5_1:9905729-9905748 Msa0716480:intron 20.0%
!! TATTGAAATGTAATGACAAT+GGG - chr5_1:9905766-9905785 None:intergenic 20.0%
!! TTATTGAAATGTAATGACAA+TGG - chr5_1:9905767-9905786 None:intergenic 20.0%
!! ATATGAAGAATTGATACAAT+GGG - chr5_1:9905926-9905945 None:intergenic 20.0%
!! TATATGAAGAATTGATACAA+TGG - chr5_1:9905927-9905946 None:intergenic 20.0%
!! AAAAGATGTACATAACAAAA+GGG - chr5_1:9906092-9906111 None:intergenic 20.0%
!!! ATGCATTCAATTTTTTTTGT+AGG + chr5_1:9906174-9906193 Msa0716480:intron 20.0%
!!! CAATTTTTCATTTGAAAGAA+AGG + chr5_1:9906557-9906576 Msa0716480:intron 20.0%
!! AATGAGATAATTGAAAAATG+TGG + chr5_1:9906968-9906987 Msa0716480:CDS 20.0%
!!! CTTTTGTTAATATGTTTTGT+TGG + chr5_1:9907311-9907330 Msa0716480:intron 20.0%
!! TTAATAATGAAGATCATGAA+AGG - chr5_1:9907365-9907384 None:intergenic 20.0%
!! CTGTCATAAATGATAATTTA+CGG + chr5_1:9907390-9907409 Msa0716480:intron 20.0%
!! TTTGAATATGAGACTAATTA+AGG - chr5_1:9908660-9908679 None:intergenic 20.0%
!!! TTTTAACAATTTGTAGTATG+AGG - chr5_1:9908692-9908711 None:intergenic 20.0%
!! AAATTGTTAAAATTCTATGG+AGG + chr5_1:9908700-9908719 Msa0716480:intron 20.0%
!!! TTTTATTTATTTAGGGTGAA+TGG + chr5_1:9908767-9908786 Msa0716480:intron 20.0%
!!! TTTTTTACCATGTTTTAACA+TGG + chr5_1:9908885-9908904 Msa0716480:intron 20.0%
!!! TTTAAAAAATTTGCCTTTTG+TGG + chr5_1:9909204-9909223 Msa0716480:three_prime_UTR 20.0%
!!! CATTTTTAGGGTTTGAAAAA+TGG + chr5_1:9903375-9903394 Msa0716480:intron 25.0%
! TGATTCACAGTTTAATAAGT+TGG + chr5_1:9903747-9903766 Msa0716480:CDS 25.0%
! GAAAATGGATGATATTACAA+TGG + chr5_1:9903816-9903835 Msa0716480:CDS 25.0%
! AAACACAAAAAGGGTTAAAA+GGG - chr5_1:9903848-9903867 None:intergenic 25.0%
! AAAACACAAAAAGGGTTAAA+AGG - chr5_1:9903849-9903868 None:intergenic 25.0%
! CCTAATAGTTTCTAATATTC+CGG - chr5_1:9903892-9903911 None:intergenic 25.0%
!!! TTTGTTATCATTGTTTTGCT+AGG + chr5_1:9904139-9904158 Msa0716480:intron 25.0%
!! ATTATGTTTGAAATTGCTTC+AGG + chr5_1:9904506-9904525 Msa0716480:intron 25.0%
!! TTATGTTTGAAATTGCTTCA+GGG + chr5_1:9904507-9904526 Msa0716480:intron 25.0%
! TTCTTTAGATCTTGTAATCA+TGG - chr5_1:9904556-9904575 None:intergenic 25.0%
! ATTGAAATCTTATCAACTGA+AGG + chr5_1:9904665-9904684 Msa0716480:CDS 25.0%
! TTGAAATCTTATCAACTGAA+GGG + chr5_1:9904666-9904685 Msa0716480:CDS 25.0%
! ATTAATCTCATTCATCCAAT+TGG - chr5_1:9904853-9904872 None:intergenic 25.0%
! ATTGGATGAATGAGATTAAT+AGG + chr5_1:9904853-9904872 Msa0716480:CDS 25.0%
!! TTATTACTAGAGGGAATTTT+GGG - chr5_1:9905069-9905088 None:intergenic 25.0%
! CATAAGAAGTTATTACTAGA+GGG - chr5_1:9905078-9905097 None:intergenic 25.0%
! TCATAAGAAGTTATTACTAG+AGG - chr5_1:9905079-9905098 None:intergenic 25.0%
!! CTGTTTGAAATATAATGTCT+TGG + chr5_1:9905527-9905546 Msa0716480:intron 25.0%
! ATTAGTGCAATTTCCAAAAA+AGG + chr5_1:9905609-9905628 Msa0716480:intron 25.0%
! TATGAAGAATTGATACAATG+GGG - chr5_1:9905925-9905944 None:intergenic 25.0%
! GTATCAATTCTTCATATACA+AGG + chr5_1:9905929-9905948 Msa0716480:intron 25.0%
! TCATGGTTTATATTCTAACA+AGG + chr5_1:9906021-9906040 Msa0716480:intron 25.0%
! CAAAAGATGTACATAACAAA+AGG - chr5_1:9906093-9906112 None:intergenic 25.0%
!!! CTTTTGTTATGTACATCTTT+TGG + chr5_1:9906091-9906110 Msa0716480:intron 25.0%
!! ATTGATCGGTTTAATACAAA+AGG + chr5_1:9906118-9906137 Msa0716480:intron 25.0%
!! TTGATCGGTTTAATACAAAA+GGG + chr5_1:9906119-9906138 Msa0716480:intron 25.0%
!!! TTCTAGTTCATTTGAAGAAT+GGG - chr5_1:9906309-9906328 None:intergenic 25.0%
! TCATTTAATTAATGAGACAC+TGG + chr5_1:9906489-9906508 Msa0716480:CDS 25.0%
! TCCAACAAGTCTTAATAATT+TGG + chr5_1:9906673-9906692 Msa0716480:CDS 25.0%
! ACCAAATTATTAAGACTTGT+TGG - chr5_1:9906677-9906696 None:intergenic 25.0%
!! TTTTCAATTATCTCATTCAC+AGG - chr5_1:9906965-9906984 None:intergenic 25.0%
! CTGTTATTAAAAATGCTCAA+AGG + chr5_1:9907461-9907480 Msa0716480:intron 25.0%
!!! ACTTTTAGGATATAGTTTCT+TGG - chr5_1:9907550-9907569 None:intergenic 25.0%
!!! GCTTCAAAAAAAGTACTTTT+AGG - chr5_1:9907564-9907583 None:intergenic 25.0%
! TGGAATAATTTAATGCATAG+AGG - chr5_1:9907681-9907700 None:intergenic 25.0%
! TAATATATGTAGACAAACTC+TGG + chr5_1:9907757-9907776 Msa0716480:intron 25.0%
!!! CTAAATTGAGGTTTTTTTGT+TGG + chr5_1:9907896-9907915 Msa0716480:intron 25.0%
! ATACTTAGATGAACATGATA+TGG + chr5_1:9908311-9908330 Msa0716480:intron 25.0%
!!! TCTTCTGTGTTTTTTATGAA+TGG + chr5_1:9908488-9908507 Msa0716480:intron 25.0%
!!! TGTTGTTTTGGTTATTTACA+TGG + chr5_1:9908552-9908571 Msa0716480:intron 25.0%
! TAGGCAAGTTAAAAATTATC+TGG - chr5_1:9908578-9908597 None:intergenic 25.0%
! GAGACTAATTAAGGATTAAA+AGG - chr5_1:9908651-9908670 None:intergenic 25.0%
! AAATTATGTTAGTGCAACTT+TGG - chr5_1:9908836-9908855 None:intergenic 25.0%
! TCTTCCTAATATCACAAATA+AGG - chr5_1:9908919-9908938 None:intergenic 25.0%
! TTATTTGTGATATTAGGAAG+AGG + chr5_1:9908918-9908937 Msa0716480:intron 25.0%
!! TTAGTACCTTTTCTCTTAAA+GGG + chr5_1:9909079-9909098 Msa0716480:CDS 25.0%
!! ATTTTTGTAAAGCCTACTAA+CGG + chr5_1:9909309-9909328 Msa0716480:three_prime_UTR 25.0%
AAGAAGAGAAAATGAGATTC+TGG - chr5_1:9903260-9903279 None:intergenic 30.0%
AACTGTGAATCATTCAGATT+CGG - chr5_1:9903739-9903758 None:intergenic 30.0%
!! AGAGTTTCTTTTGGAGAAAA+TGG + chr5_1:9903801-9903820 Msa0716480:CDS 30.0%
CCGGAATATTAGAAACTATT+AGG + chr5_1:9903889-9903908 Msa0716480:intron 30.0%
TGATTTCGAAATTCATGAGT+TGG + chr5_1:9903914-9903933 Msa0716480:intron 30.0%
TAATTTGATCCATGTGTTTC+TGG + chr5_1:9903971-9903990 Msa0716480:intron 30.0%
ATAACAAAACCAACAACCTA+AGG - chr5_1:9904115-9904134 None:intergenic 30.0%
TAAACTGGTTGCAAAAAAGA+AGG + chr5_1:9904199-9904218 Msa0716480:CDS 30.0%
AAACTGGTTGCAAAAAAGAA+GGG + chr5_1:9904200-9904219 Msa0716480:CDS 30.0%
!! TGTACCGTATTATTTTGTCT+AGG + chr5_1:9904278-9904297 Msa0716480:intron 30.0%
TAGTGAAAGATGTAAGTTTG+AGG + chr5_1:9904354-9904373 Msa0716480:intron 30.0%
ATAACAAATTCACAGGAGTT+AGG - chr5_1:9904446-9904465 None:intergenic 30.0%
TAAAGAAAATGTGAAGACTG+AGG + chr5_1:9904569-9904588 Msa0716480:CDS 30.0%
! AATTTTCCACCAGTTAGTAA+AGG - chr5_1:9904648-9904667 None:intergenic 30.0%
! CTTTCTCATCTAAAATCGAA+AGG + chr5_1:9904783-9904802 Msa0716480:CDS 30.0%
! TCATCTAAAATCGAAAGGAT+TGG + chr5_1:9904788-9904807 Msa0716480:CDS 30.0%
TAAAATCGAAAGGATTGGAT+GGG + chr5_1:9904793-9904812 Msa0716480:CDS 30.0%
AGAGGAGCAATTATCATATA+TGG - chr5_1:9904819-9904838 None:intergenic 30.0%
! GTTATTACTAGAGGGAATTT+TGG - chr5_1:9905070-9905089 None:intergenic 30.0%
!! ATGATGCTAAGAAGTGTTTA+AGG + chr5_1:9905110-9905129 Msa0716480:CDS 30.0%
! GAAAATAAGCTTCTTTTGAC+TGG + chr5_1:9905341-9905360 Msa0716480:CDS 30.0%
TCAAGAGATGAGAATATATC+AGG - chr5_1:9905422-9905441 None:intergenic 30.0%
AAGTGTGATCAATAACCAAT+AGG - chr5_1:9905474-9905493 None:intergenic 30.0%
!!! GGTCTATAATCATCCTTTTT+TGG - chr5_1:9905625-9905644 None:intergenic 30.0%
! GGTCAAGTTACTTGTTAATT+AGG - chr5_1:9905646-9905665 None:intergenic 30.0%
! AACAATGTAGTGCTTTGTTA+TGG + chr5_1:9905692-9905711 Msa0716480:intron 30.0%
! TTCCTTTTCATTTGAATCTG+TGG + chr5_1:9905869-9905888 Msa0716480:intron 30.0%
ATGAAGAATTGATACAATGG+GGG - chr5_1:9905924-9905943 None:intergenic 30.0%
AATATCTTATGAGCATAACC+TGG - chr5_1:9906059-9906078 None:intergenic 30.0%
GTACATAACAAAAGGGAAAA+GGG - chr5_1:9906085-9906104 None:intergenic 30.0%
TGTACATAACAAAAGGGAAA+AGG - chr5_1:9906086-9906105 None:intergenic 30.0%
! CATCTTTTGGCAATATTGAT+CGG + chr5_1:9906104-9906123 Msa0716480:intron 30.0%
! AAGAAAAATAAAGGCACACA+TGG - chr5_1:9906149-9906168 None:intergenic 30.0%
! TTTTTGTAGGTTTAACCTGT+CGG + chr5_1:9906187-9906206 Msa0716480:intron 30.0%
CAATCAAAGAACACATACTT+GGG - chr5_1:9906264-9906283 None:intergenic 30.0%
TCAATCAAAGAACACATACT+TGG - chr5_1:9906265-9906284 None:intergenic 30.0%
!! CTTCTAGTTCATTTGAAGAA+TGG - chr5_1:9906310-9906329 None:intergenic 30.0%
CATTCTTCAAATGAACTAGA+AGG + chr5_1:9906308-9906327 Msa0716480:intron 30.0%
AATTAGCTAAACCATCCAAT+CGG - chr5_1:9906773-9906792 None:intergenic 30.0%
AATTAGCTAAACCATCCAAT+CGG - chr5_1:9906773-9906792 None:intergenic 30.0%
ATCCATTATATCTAGCACTT+TGG - chr5_1:9907165-9907184 None:intergenic 30.0%
AAGTTGTGTTATACAAGCAT+TGG - chr5_1:9907270-9907289 None:intergenic 30.0%
TGATAATTTACGGATCTGTT+TGG + chr5_1:9907400-9907419 Msa0716480:intron 30.0%
AACTTGTAAACATGCTTAAG+GGG - chr5_1:9907521-9907540 None:intergenic 30.0%
CAACTTGTAAACATGCTTAA+GGG - chr5_1:9907522-9907541 None:intergenic 30.0%
AAATTGAAGAGGCTAAATTG+AGG + chr5_1:9907884-9907903 Msa0716480:intron 30.0%
TATTCTTTATGACAGTGACT+GGG + chr5_1:9908039-9908058 Msa0716480:CDS 30.0%
! TAATTTGTACAACATGTGAC+TGG + chr5_1:9908279-9908298 Msa0716480:intron 30.0%
AATTTGTACAACATGTGACT+GGG + chr5_1:9908280-9908299 Msa0716480:intron 30.0%
CATAAAAAACACAGAAGAGA+AGG - chr5_1:9908486-9908505 None:intergenic 30.0%
AACAGTTAGGCAAAATTTCT+AGG - chr5_1:9908597-9908616 None:intergenic 30.0%
! GAAATTTTGCCTAACTGTTT+TGG + chr5_1:9908598-9908617 Msa0716480:intron 30.0%
TTTCAGTAAATCTTGGAGTT+AGG - chr5_1:9908798-9908817 None:intergenic 30.0%
CTTCGTATTTCAGTAAATCT+TGG - chr5_1:9908805-9908824 None:intergenic 30.0%
AGATTTACTGAAATACGAAG+AGG + chr5_1:9908805-9908824 Msa0716480:intron 30.0%
ACAAACTCCATGTTAAAACA+TGG - chr5_1:9908895-9908914 None:intergenic 30.0%
!! TGTGCCTTATTTGTGATATT+AGG + chr5_1:9908912-9908931 Msa0716480:intron 30.0%
! ATATTAGGAAGAGGATGTTT+TGG + chr5_1:9908927-9908946 Msa0716480:intron 30.0%
! GTTAGTACCTTTTCTCTTAA+AGG + chr5_1:9909078-9909097 Msa0716480:CDS 30.0%
AAAAAGTTCTGTTGCAGATT+GGG - chr5_1:9909171-9909190 None:intergenic 30.0%
ATTACATCTCAAACCACAAA+AGG - chr5_1:9909220-9909239 None:intergenic 30.0%
!!! CTTGTGGTCATGTTTTTTTT+TGG + chr5_1:9909355-9909374 Msa0716480:three_prime_UTR 30.0%
ACAAGCAAATATGAATTGAG+TGG - chr5_1:9909409-9909428 None:intergenic 30.0%
!!! AGGCTATGTTTTGATTTTTG+TGG + chr5_1:9909480-9909499 Msa0716480:three_prime_UTR 30.0%
ATGATGATTTACTAAACCAG+CGG - chr5_1:9909506-9909525 None:intergenic 30.0%
TGTTAATAGTGTTGTGTGAG+TGG - chr5_1:9903201-9903220 None:intergenic 35.0%
! ATTCTGGAAGAGAAGATGAA+AGG - chr5_1:9903244-9903263 None:intergenic 35.0%
TGGGAATAATGTGTATGTGA+AGG + chr5_1:9903579-9903598 Msa0716480:intron 35.0%
TAATGTGTATGTGAAGGAAG+TGG + chr5_1:9903585-9903604 Msa0716480:intron 35.0%
! ACTCTACTCAGAGTTTCTTT+TGG + chr5_1:9903792-9903811 Msa0716480:CDS 35.0%
AACAATGAAAAACGAGACAC+TGG - chr5_1:9904027-9904046 None:intergenic 35.0%
AGTTTACTCTCTTCTTCATC+CGG - chr5_1:9904185-9904204 None:intergenic 35.0%
TGCAAGCATAACAAATTCAC+AGG - chr5_1:9904453-9904472 None:intergenic 35.0%
TTTCTCAGTTCTTTCTTCCT+CGG - chr5_1:9904607-9904626 None:intergenic 35.0%
! TTAAGTGGTTGATTTCCTTG+TGG + chr5_1:9904691-9904710 Msa0716480:CDS 35.0%
TTGATTTCCTTGTGGCAAAA+TGG + chr5_1:9904699-9904718 Msa0716480:CDS 35.0%
! ATTCAATCCATTTTGCCACA+AGG - chr5_1:9904709-9904728 None:intergenic 35.0%
!! TTGTGGCAAAATGGATTGAA+TGG + chr5_1:9904708-9904727 Msa0716480:CDS 35.0%
!! TGTGGCAAAATGGATTGAAT+GGG + chr5_1:9904709-9904728 Msa0716480:CDS 35.0%
GGAAGACAATCCAAACAATT+GGG + chr5_1:9904757-9904776 Msa0716480:CDS 35.0%
GAGAAAGAAACCCAATTGTT+TGG - chr5_1:9904770-9904789 None:intergenic 35.0%
CTAAAATCGAAAGGATTGGA+TGG + chr5_1:9904792-9904811 Msa0716480:CDS 35.0%
! CTCTCTGATATTTGTTACCA+TGG - chr5_1:9905009-9905028 None:intergenic 35.0%
ATCAGAGAGATGAAATCAGA+AGG + chr5_1:9905020-9905039 Msa0716480:CDS 35.0%
AAACATATGCCTAGAACAGT+TGG + chr5_1:9905043-9905062 Msa0716480:CDS 35.0%
! AGTGTTTAAGGTCATACAGT+TGG + chr5_1:9905122-9905141 Msa0716480:CDS 35.0%
!! GAAGTATCTTGTTGTTGATG+AGG + chr5_1:9905144-9905163 Msa0716480:CDS 35.0%
CTCTTGAAGAATTTGAGTCA+TGG + chr5_1:9905435-9905454 Msa0716480:CDS 35.0%
! GGTTAGTGTTCTTTTCCTAT+TGG + chr5_1:9905456-9905475 Msa0716480:intron 35.0%
TTCTTCTTTCTACTGTCATG+TGG + chr5_1:9905494-9905513 Msa0716480:intron 35.0%
ATCTTGCCGAACAATATAGT+AGG - chr5_1:9905584-9905603 None:intergenic 35.0%
CATATCAAAGGGAAGCTATT+TGG + chr5_1:9905740-9905759 Msa0716480:intron 35.0%
! TGTTAGAAGAGCACATAACA+AGG - chr5_1:9905987-9906006 None:intergenic 35.0%
TGTTATGTGCTCTTCTAACA+TGG + chr5_1:9905987-9906006 Msa0716480:intron 35.0%
! TTTTGTAGGTTTAACCTGTC+GGG + chr5_1:9906188-9906207 Msa0716480:intron 35.0%
CCTAAGAATTGAATGAAGCT+TGG - chr5_1:9906362-9906381 None:intergenic 35.0%
CCAAGCTTCATTCAATTCTT+AGG + chr5_1:9906359-9906378 Msa0716480:CDS 35.0%
!!! ACAATGATCTCTTTTTTCCG+TGG - chr5_1:9906430-9906449 None:intergenic 35.0%
TGAGACACTGGAGAAATATT+TGG + chr5_1:9906501-9906520 Msa0716480:CDS 35.0%
! CATCAAAGACTGATTCTAAG+AGG - chr5_1:9906733-9906752 None:intergenic 35.0%
CTCTTAGAATCAGTCTTTGA+TGG + chr5_1:9906731-9906750 Msa0716480:CDS 35.0%
TCATGTAAGTAATGTCCGAT+TGG + chr5_1:9906755-9906774 Msa0716480:intron 35.0%
!! AGACTGATTCTAAGACTAAG+AGG - chr5_1:9906838-9906857 None:intergenic 35.0%
GTCTTAGAATCAGTCTTTGA+TGG + chr5_1:9906842-9906861 Msa0716480:intron 35.0%
TCATGTAAGTAATGTCCGAT+TGG + chr5_1:9906755-9906774 Msa0716480:intron 35.0%
TCAATTATCTCATTCACAGG+AGG - chr5_1:9906962-9906981 None:intergenic 35.0%
CCACAAAAAAGGAAGTAGAA+AGG - chr5_1:9907075-9907094 None:intergenic 35.0%
!!! CCTTTCTACTTCCTTTTTTG+TGG + chr5_1:9907072-9907091 Msa0716480:intron 35.0%
AACCTGATAGCAATTAGCAA+AGG - chr5_1:9907123-9907142 None:intergenic 35.0%
! GACCAAAGTGCTAGATATAA+TGG + chr5_1:9907160-9907179 Msa0716480:CDS 35.0%
GCAACTTGTAAACATGCTTA+AGG - chr5_1:9907523-9907542 None:intergenic 35.0%
! AAAATCTCCTCTTAGCCTTT+AGG - chr5_1:9907597-9907616 None:intergenic 35.0%
! AACTATCACGCATAGCTTTA+AGG - chr5_1:9907644-9907663 None:intergenic 35.0%
CACTAATGCTTCAGTTTCAA+TGG - chr5_1:9907701-9907720 None:intergenic 35.0%
! CATTGAAACTGAAGCATTAG+TGG + chr5_1:9907699-9907718 Msa0716480:intron 35.0%
CCATGGTTTAAACAGAGATA+TGG - chr5_1:9907792-9907811 None:intergenic 35.0%
CCATATCTCTGTTTAAACCA+TGG + chr5_1:9907789-9907808 Msa0716480:intron 35.0%
TCACATGTCACAAATTGAAG+AGG + chr5_1:9907873-9907892 Msa0716480:intron 35.0%
AATCTTTCTTCTTTCCACCA+GGG + chr5_1:9907976-9907995 Msa0716480:CDS 35.0%
GTATTCTTTATGACAGTGAC+TGG + chr5_1:9908038-9908057 Msa0716480:CDS 35.0%
!!! ATGTTTTGACTTTTTCCTGC+TGG + chr5_1:9908063-9908082 Msa0716480:intron 35.0%
!!! TGTTTTGACTTTTTCCTGCT+GGG + chr5_1:9908064-9908083 Msa0716480:intron 35.0%
GTAAATCCATTTGAGGATTC+TGG - chr5_1:9908148-9908167 None:intergenic 35.0%
! GAATCCTCAAATGGATTTAC+AGG + chr5_1:9908148-9908167 Msa0716480:intron 35.0%
ATGGATAGATGTCACAGAAT+CGG + chr5_1:9908173-9908192 Msa0716480:CDS 35.0%
ATTTGTACAACATGTGACTG+GGG + chr5_1:9908281-9908300 Msa0716480:intron 35.0%
! ACATGATATGGTCCTTTTAC+AGG + chr5_1:9908323-9908342 Msa0716480:intron 35.0%
! CATGATATGGTCCTTTTACA+GGG + chr5_1:9908324-9908343 Msa0716480:intron 35.0%
AGAGAAAGGACAATTTCATC+AGG + chr5_1:9908398-9908417 Msa0716480:CDS 35.0%
AACCTCCATTTCATCCATAA+GGG - chr5_1:9908439-9908458 None:intergenic 35.0%
AAACCTCCATTTCATCCATA+AGG - chr5_1:9908440-9908459 None:intergenic 35.0%
AAAATGTTCCAACATGCCAT+TGG + chr5_1:9908520-9908539 Msa0716480:intron 35.0%
!! TTTGCCTAACTGTTTTGGAT+TGG + chr5_1:9908603-9908622 Msa0716480:intron 35.0%
TAAGCCAATCCAAAACAGTT+AGG - chr5_1:9908610-9908629 None:intergenic 35.0%
! ATTGGCTTAACTAGATGAAC+AGG + chr5_1:9908621-9908640 Msa0716480:intron 35.0%
! AAATTCTATGGAGGATTAGC+TGG + chr5_1:9908709-9908728 Msa0716480:intron 35.0%
AGATATTAGTGATGAAGACC+TGG + chr5_1:9908996-9909015 Msa0716480:CDS 35.0%
CAAAAAGTTCTGTTGCAGAT+TGG - chr5_1:9909172-9909191 None:intergenic 35.0%
! ATCTGCAACAGAACTTTTTG+AGG + chr5_1:9909172-9909191 Msa0716480:three_prime_UTR 35.0%
! TCTGCAACAGAACTTTTTGA+GGG + chr5_1:9909173-9909192 Msa0716480:three_prime_UTR 35.0%
TGTAGAAATGAAGCAACTTG+TGG + chr5_1:9909339-9909358 Msa0716480:three_prime_UTR 35.0%
!! CTTAGTTTGTTGGATATGGT+GGG + chr5_1:9909442-9909461 Msa0716480:three_prime_UTR 35.0%
GTCGTTCTTCACATTGTTCT+TGG - chr5_1:9903404-9903423 None:intergenic 40.0%
!! TCTTCTTCTAGGACTGAAGT+TGG - chr5_1:9903445-9903464 None:intergenic 40.0%
AACTTCAGTCCTAGAAGAAG+AGG + chr5_1:9903444-9903463 Msa0716480:CDS 40.0%
TCACAGATACCTCTTCTTCT+AGG - chr5_1:9903456-9903475 None:intergenic 40.0%
ATCGCTTGTACCGAAAACAA+TGG + chr5_1:9903648-9903667 Msa0716480:CDS 40.0%
! TCTTCCTCAGCCATTGTTTT+CGG - chr5_1:9903661-9903680 None:intergenic 40.0%
CTTGCATTTCCAGAAACACA+TGG - chr5_1:9903983-9904002 None:intergenic 40.0%
!! CATGTGTTTCTGGAAATGCA+AGG + chr5_1:9903981-9904000 Msa0716480:intron 40.0%
ATGAAAAACGAGACACTGGA+AGG - chr5_1:9904023-9904042 None:intergenic 40.0%
!! ATCATTGTTTTGCTAGGCTG+CGG + chr5_1:9904145-9904164 Msa0716480:intron 40.0%
GGATGAAGAAGAGAGTAAAC+TGG + chr5_1:9904184-9904203 Msa0716480:CDS 40.0%
! CTGCCTTTCTTTTTGATCCA+CGG - chr5_1:9904226-9904245 None:intergenic 40.0%
ACTCACAGTATTGCATTGTG+AGG - chr5_1:9904249-9904268 None:intergenic 40.0%
AAATGTGAAGACTGAGGATG+TGG + chr5_1:9904575-9904594 Msa0716480:CDS 40.0%
AAAGAACTGAGAAAGAGCAG+AGG + chr5_1:9904613-9904632 Msa0716480:CDS 40.0%
AAGAACTGAGAAAGAGCAGA+GGG + chr5_1:9904614-9904633 Msa0716480:CDS 40.0%
!! ATCAACTGAAGGGTGTTAAG+TGG + chr5_1:9904676-9904695 Msa0716480:CDS 40.0%
TGGGATTCTTGCTGATCAAA+TGG + chr5_1:9904728-9904747 Msa0716480:CDS 40.0%
GGGATTCTTGCTGATCAAAT+GGG + chr5_1:9904729-9904748 Msa0716480:CDS 40.0%
TTGCTGATCAAATGGGTCTT+GGG + chr5_1:9904736-9904755 Msa0716480:CDS 40.0%
GGGAAGACAATCCAAACAAT+TGG + chr5_1:9904756-9904775 Msa0716480:CDS 40.0%
CTCATTCATCCAATTGGAGA+GGG - chr5_1:9904847-9904866 None:intergenic 40.0%
TCTCATTCATCCAATTGGAG+AGG - chr5_1:9904848-9904867 None:intergenic 40.0%
TACCATGGTAGATAACAGCA+GGG - chr5_1:9904994-9905013 None:intergenic 40.0%
TTACCATGGTAGATAACAGC+AGG - chr5_1:9904995-9905014 None:intergenic 40.0%
! AATTTTGGGCCAACTGTTCT+AGG - chr5_1:9905055-9905074 None:intergenic 40.0%
ATGCCAACTGCAAATTAGTG+AGG + chr5_1:9905297-9905316 Msa0716480:CDS 40.0%
! CATCCTCACTAATTTGCAGT+TGG - chr5_1:9905303-9905322 None:intergenic 40.0%
ATAGCTCAGCCAAGTTATTC+TGG - chr5_1:9905376-9905395 None:intergenic 40.0%
AGAATAACTTGGCTGAGCTA+TGG + chr5_1:9905375-9905394 Msa0716480:CDS 40.0%
CGCCACAGATTCAAATGAAA+AGG - chr5_1:9905874-9905893 None:intergenic 40.0%
AGAATTGATACAATGGGGGA+GGG - chr5_1:9905920-9905939 None:intergenic 40.0%
AAGAATTGATACAATGGGGG+AGG - chr5_1:9905921-9905940 None:intergenic 40.0%
AGGTCAGTTTCTTTCAAACC+TGG + chr5_1:9905949-9905968 Msa0716480:intron 40.0%
TGCTCTTCTAACATGGTCAA+TGG + chr5_1:9905994-9906013 Msa0716480:intron 40.0%
ACATGGTCAATGGTTGTTCA+TGG + chr5_1:9906004-9906023 Msa0716480:intron 40.0%
TTCATCCTACGCAACAGAAA+TGG - chr5_1:9906385-9906404 None:intergenic 40.0%
ATGTTGAGCTAATGTTGCCA+CGG + chr5_1:9906410-9906429 Msa0716480:CDS 40.0%
TTGGACAAGAAACGATCAGT+TGG + chr5_1:9906520-9906539 Msa0716480:CDS 40.0%
! AAGACTGATTCTAAGAGGTC+AGG - chr5_1:9906728-9906747 None:intergenic 40.0%
GTAAGTAATGTCCGATTGGA+TGG + chr5_1:9906759-9906778 Msa0716480:intron 40.0%
!! GATTCTAAGACTAAGAGGTC+AGG - chr5_1:9906833-9906852 None:intergenic 40.0%
GTAAGTAATGTCCGATTGGA+TGG + chr5_1:9906759-9906778 Msa0716480:intron 40.0%
TGCCTTTGCTAATTGCTATC+AGG + chr5_1:9907118-9907137 Msa0716480:intron 40.0%
AAAAGGGTTTCGAAGTTTGC+AGG + chr5_1:9907198-9907217 Msa0716480:CDS 40.0%
TTCGAAGTTTGCAGGATTGA+TGG + chr5_1:9907206-9907225 Msa0716480:CDS 40.0%
! AGTTTGCAGGATTGATGGTT+CGG + chr5_1:9907211-9907230 Msa0716480:CDS 40.0%
TGAAGCTGGATGATAGGAAA+CGG + chr5_1:9907234-9907253 Msa0716480:CDS 40.0%
GAAGCTTGTACAACACCTAA+AGG + chr5_1:9907579-9907598 Msa0716480:intron 40.0%
TACAACACCTAAAGGCTAAG+AGG + chr5_1:9907587-9907606 Msa0716480:intron 40.0%
! ACTGAAGCATTAGTGGCAAT+TGG + chr5_1:9907706-9907725 Msa0716480:intron 40.0%
AGTGTTGCAACACAAATCCA+TGG - chr5_1:9907809-9907828 None:intergenic 40.0%
TGGTTGTATCATTGAAGTCC+TGG - chr5_1:9907946-9907965 None:intergenic 40.0%
AAGAAAGATTCTGCAGTTGC+TGG - chr5_1:9907966-9907985 None:intergenic 40.0%
GAATCTTTCTTCTTTCCACC+AGG + chr5_1:9907975-9907994 Msa0716480:CDS 40.0%
TGTACTCCAGAATCCTCAAA+TGG + chr5_1:9908139-9908158 Msa0716480:intron 40.0%
ATGGCCTGTAAATCCATTTG+AGG - chr5_1:9908155-9908174 None:intergenic 40.0%
! TCAAATGGATTTACAGGCCA+TGG + chr5_1:9908154-9908173 Msa0716480:CDS 40.0%
GATTCTGTGACATCTATCCA+TGG - chr5_1:9908174-9908193 None:intergenic 40.0%
CAAAGCCTGTTCATGTTTAC+AGG + chr5_1:9908201-9908220 Msa0716480:CDS 40.0%
! AATCAGTAGAGGTACGTACT+TGG + chr5_1:9908237-9908256 Msa0716480:intron 40.0%
TTTGTACAACATGTGACTGG+GGG + chr5_1:9908282-9908301 Msa0716480:intron 40.0%
! ATATGGTCCTTTTACAGGGT+CGG + chr5_1:9908328-9908347 Msa0716480:intron 40.0%
TCCATTTCATCCATAAGGGA+AGG - chr5_1:9908435-9908454 None:intergenic 40.0%
TTCCCTTATGGATGAAATGG+AGG + chr5_1:9908434-9908453 Msa0716480:CDS 40.0%
! CTGTATCATTTTGTCCTCAG+CGG - chr5_1:9908974-9908993 None:intergenic 40.0%
AATTGTCAGAGGTAATGTCC+TGG + chr5_1:9909277-9909296 Msa0716480:three_prime_UTR 40.0%
TACAAAAATGAATGCCCTCC+AGG - chr5_1:9909298-9909317 None:intergenic 40.0%
! CTACATCTAGTTCCGTTAGT+AGG - chr5_1:9909324-9909343 None:intergenic 40.0%
CTATTCACAAATCCAGTGTG+TGG + chr5_1:9909380-9909399 Msa0716480:three_prime_UTR 40.0%
!! TAAGCTGCTCCTTAGTTTGT+TGG + chr5_1:9909432-9909451 Msa0716480:three_prime_UTR 40.0%
!! GCTCCTTAGTTTGTTGGATA+TGG + chr5_1:9909438-9909457 Msa0716480:three_prime_UTR 40.0%
CCACCATATCCAACAAACTA+AGG - chr5_1:9909444-9909463 None:intergenic 40.0%
!! CCTTAGTTTGTTGGATATGG+TGG + chr5_1:9909441-9909460 Msa0716480:three_prime_UTR 40.0%
TGTGTATGTGAAGGAAGTGG+AGG + chr5_1:9903588-9903607 Msa0716480:intron 45.0%
GAAGGAAGTGGAGGTGAAAT+CGG + chr5_1:9903597-9903616 Msa0716480:intron 45.0%
TGTACCGAAAACAATGGCTG+AGG + chr5_1:9903654-9903673 Msa0716480:CDS 45.0%
CAGAAAGTAAAGGGGTCCTT+AGG + chr5_1:9904096-9904115 Msa0716480:intron 45.0%
! TAAAGGGGTCCTTAGGTTGT+TGG + chr5_1:9904103-9904122 Msa0716480:intron 45.0%
!! TCATTGTTTTGCTAGGCTGC+GGG + chr5_1:9904146-9904165 Msa0716480:intron 45.0%
GCTTCAGGGAAAAGCCAAAA+AGG + chr5_1:9904521-9904540 Msa0716480:intron 45.0%
! CATGGCTTCAACTGCCTTTT+TGG - chr5_1:9904538-9904557 None:intergenic 45.0%
GAGCTGATGCCTTTACTAAC+TGG + chr5_1:9904636-9904655 Msa0716480:CDS 45.0%
CTGATGCCTTTACTAACTGG+TGG + chr5_1:9904639-9904658 Msa0716480:CDS 45.0%
CTTGCTGATCAAATGGGTCT+TGG + chr5_1:9904735-9904754 Msa0716480:CDS 45.0%
!! CAATTGGAGAGGGTTGATAG+AGG - chr5_1:9904837-9904856 None:intergenic 45.0%
CTCTATCAACCCTCTCCAAT+TGG + chr5_1:9904835-9904854 Msa0716480:CDS 45.0%
! TTTTGTAACCTCAGGGACAC+AGG + chr5_1:9905267-9905286 Msa0716480:intron 45.0%
TACACCGCTCCAGAATAACT+TGG + chr5_1:9905364-9905383 Msa0716480:CDS 45.0%
! TCAGCCAAGTTATTCTGGAG+CGG - chr5_1:9905371-9905390 None:intergenic 45.0%
AATTGATACAATGGGGGAGG+GGG - chr5_1:9905918-9905937 None:intergenic 45.0%
GAATTGATACAATGGGGGAG+GGG - chr5_1:9905919-9905938 None:intergenic 45.0%
ACAAGGTACAAGCAACAACC+AGG - chr5_1:9906038-9906057 None:intergenic 45.0%
ACAAGGTACAAGCAACAACC+AGG + chr5_1:9906038-9906057 Msa0716480:intron 45.0%
TGGAGCAACAATGGAAGAGT+TGG + chr5_1:9906223-9906242 Msa0716480:CDS 45.0%
GCTAAATGACTGTCTCATGC+AGG + chr5_1:9906330-9906349 Msa0716480:intron 45.0%
TTAGGCCATTTCTGTTGCGT+AGG + chr5_1:9906377-9906396 Msa0716480:CDS 45.0%
CTTCTGATGCTCAGTCATGT+TGG - chr5_1:9906458-9906477 None:intergenic 45.0%
TGAGCATCAGAAGAACTTGC+AGG + chr5_1:9906465-9906484 Msa0716480:CDS 45.0%
! CTGATTCTAAGAGGTCAGGA+TGG - chr5_1:9906724-9906743 None:intergenic 45.0%
CTAAGACTAAGAGGTCAGGA+TGG - chr5_1:9906829-9906848 None:intergenic 45.0%
GCTATTTGCACGGAATCACA+AGG + chr5_1:9907024-9907043 Msa0716480:CDS 45.0%
TAGCAGCTTGGCCACAAAAA+AGG - chr5_1:9907086-9907105 None:intergenic 45.0%
! AGGTTCTGATCTTCAGTCAG+TGG + chr5_1:9907138-9907157 Msa0716480:intron 45.0%
! GAAGCATTAGTGGCAATTGG+CGG + chr5_1:9907709-9907728 Msa0716480:intron 45.0%
AAGCATTAGTGGCAATTGGC+GGG + chr5_1:9907710-9907729 Msa0716480:intron 45.0%
TCAATAGATAAACGCCCAGC+AGG - chr5_1:9908081-9908100 None:intergenic 45.0%
CTGGAGTACAACGAAGTCAT+AGG - chr5_1:9908129-9908148 None:intergenic 45.0%
TCAACATCCGACCCTGTAAA+AGG - chr5_1:9908338-9908357 None:intergenic 45.0%
! CAAGTTGAAGCTTGAGCATG+TGG + chr5_1:9908371-9908390 Msa0716480:CDS 45.0%
GAGCATGTGGTGATAGAGAA+AGG + chr5_1:9908384-9908403 Msa0716480:CDS 45.0%
GCCTTCCCTTATGGATGAAA+TGG + chr5_1:9908431-9908450 Msa0716480:CDS 45.0%
ATGTTCCAACATGCCATTGG+TGG + chr5_1:9908523-9908542 Msa0716480:intron 45.0%
TGTTCCAACATGCCATTGGT+GGG + chr5_1:9908524-9908543 Msa0716480:intron 45.0%
AACAACACTTTCCCCACCAA+TGG - chr5_1:9908539-9908558 None:intergenic 45.0%
!!! TGGTGGGGAAAGTGTTGTTT+TGG + chr5_1:9908540-9908559 Msa0716480:intron 45.0%
!! CTATGGAGGATTAGCTGGTA+TGG + chr5_1:9908714-9908733 Msa0716480:intron 45.0%
! ACCTTTTCTCTTAAAGGGCC+TGG + chr5_1:9909084-9909103 Msa0716480:CDS 45.0%
! TCCAGGCCCTTTAAGAGAAA+AGG - chr5_1:9909088-9909107 None:intergenic 45.0%
TTTCTCTTAAAGGGCCTGGA+TGG + chr5_1:9909088-9909107 Msa0716480:CDS 45.0%
TTCTCTTAAAGGGCCTGGAT+GGG + chr5_1:9909089-9909108 Msa0716480:CDS 45.0%
GGGAAATTAGCTGTTGAGAG+TGG - chr5_1:9909151-9909170 None:intergenic 45.0%
!! CAACAGAACTTTTTGAGGGC+TGG + chr5_1:9909177-9909196 Msa0716480:three_prime_UTR 45.0%
CCTCTGACAATTGACATCAC+TGG - chr5_1:9909269-9909288 None:intergenic 45.0%
CCAGTGATGTCAATTGTCAG+AGG + chr5_1:9909266-9909285 Msa0716480:three_prime_UTR 45.0%
ATTGAGTGGATACCACACAC+TGG - chr5_1:9909395-9909414 None:intergenic 45.0%
!! GTGGGACTGCATTGATTCAA+AGG + chr5_1:9909460-9909479 Msa0716480:three_prime_UTR 45.0%
!!! GTTTTGATTTTTGTGGCCGC+TGG + chr5_1:9909487-9909506 Msa0716480:three_prime_UTR 45.0%
!!! ATTTTTTTTTTATCATTTTT+AGG + chr5_1:9903362-9903381 Msa0716480:intron 5.0%
!!! TTTTTTTTTTATCATTTTTA+GGG + chr5_1:9903363-9903382 Msa0716480:intron 5.0%
!!! TATTGTATTTTTATTTATTT+AGG + chr5_1:9908759-9908778 Msa0716480:intron 5.0%
!!! ATTGTATTTTTATTTATTTA+GGG + chr5_1:9908760-9908779 Msa0716480:intron 5.0%
!! GAAGTTGGTGATTCCACTGC+AGG - chr5_1:9903430-9903449 None:intergenic 50.0%
GTTGCTGAAAGCTCGTGCAA+AGG + chr5_1:9903687-9903706 Msa0716480:CDS 50.0%
AGCTCGTGCAAAGGAAGAAG+AGG + chr5_1:9903696-9903715 Msa0716480:CDS 50.0%
TGCGGGTGAACAAGAGAAAC+CGG + chr5_1:9904163-9904182 Msa0716480:CDS 50.0%
GTTGCAAAAAAGAAGGGCCG+TGG + chr5_1:9904206-9904225 Msa0716480:CDS 50.0%
GGGCCGTGGATCAAAAAGAA+AGG + chr5_1:9904220-9904239 Msa0716480:CDS 50.0%
TGAGGATGTGGATTTGACCG+AGG + chr5_1:9904587-9904606 Msa0716480:CDS 50.0%
! TAGATAACAGCAGGGAGCGT+TGG - chr5_1:9904986-9905005 None:intergenic 50.0%
CTCCCTGCTGTTATCTACCA+TGG + chr5_1:9904989-9905008 Msa0716480:CDS 50.0%
!! TTTTTCAGCCTGTGTCCCTG+AGG - chr5_1:9905278-9905297 None:intergenic 50.0%
ATTGATACAATGGGGGAGGG+GGG - chr5_1:9905917-9905936 None:intergenic 50.0%
GAGCACTACTGGAGCAACAA+TGG + chr5_1:9906214-9906233 Msa0716480:CDS 50.0%
TGACTGTCTCATGCAGGTTG+TGG + chr5_1:9906336-9906355 Msa0716480:intron 50.0%
!! GTACTGTGCCGATTTGATGC+AGG + chr5_1:9906644-9906663 Msa0716480:intron 50.0%
GAGCACGTCCTGCATCAAAT+CGG - chr5_1:9906655-9906674 None:intergenic 50.0%
TCAATTGCTCGACCGATTGC+TGG + chr5_1:9906997-9907016 Msa0716480:CDS 50.0%
CAAATAGCCGCTCCAGCAAT+CGG - chr5_1:9907012-9907031 None:intergenic 50.0%
AGTGCACATGAGTAGCAGCT+TGG - chr5_1:9907098-9907117 None:intergenic 50.0%
!! GATTGATGGTTCGGTGAAGC+TGG + chr5_1:9907220-9907239 Msa0716480:CDS 50.0%
! GTTCGGTGAAGCTGGATGAT+AGG + chr5_1:9907228-9907247 Msa0716480:CDS 50.0%
AGCATTAGTGGCAATTGGCG+GGG + chr5_1:9907711-9907730 Msa0716480:intron 50.0%
TTTCTTCTTTCCACCAGGGC+TGG + chr5_1:9907980-9907999 Msa0716480:CDS 50.0%
TACAAGTGTCAGCTGCAGTG+AGG - chr5_1:9908021-9908040 None:intergenic 50.0%
GCGAGCCTGTAAACATGAAC+AGG - chr5_1:9908209-9908228 None:intergenic 50.0%
CGCTACTGCACAATCAGTAG+AGG + chr5_1:9908226-9908245 Msa0716480:CDS 50.0%
GTTCCAACATGCCATTGGTG+GGG + chr5_1:9908525-9908544 Msa0716480:intron 50.0%
TTTCCCCACCAATGGCATGT+TGG - chr5_1:9908531-9908550 None:intergenic 50.0%
TCGAGATGAAGAAACCGCTG+AGG + chr5_1:9908957-9908976 Msa0716480:CDS 50.0%
TGAAGACCTGGAGAAGCTCT+TGG + chr5_1:9909008-9909027 Msa0716480:CDS 50.0%
TGTCAGAGGTAATGTCCTGG+AGG + chr5_1:9909280-9909299 Msa0716480:three_prime_UTR 50.0%
GTCAGAGGTAATGTCCTGGA+GGG + chr5_1:9909281-9909300 Msa0716480:three_prime_UTR 50.0%
GAAGAACGACGATCCTGCAG+TGG + chr5_1:9903414-9903433 Msa0716480:CDS 55.0%
GGAAGTGGAGGTGAAATCGG+AGG + chr5_1:9903600-9903619 Msa0716480:intron 55.0%
GGAGGTGAAATCGGAGGAAG+AGG + chr5_1:9903606-9903625 Msa0716480:CDS 55.0%
CAGTAGTGCTCTTTCCCGAC+AGG - chr5_1:9906205-9906224 None:intergenic 55.0%
!! CTGTCGGGAAAGAGCACTAC+TGG + chr5_1:9906203-9906222 Msa0716480:CDS 55.0%
GCGCTCACTGTCAGCTATGT+GGG + chr5_1:9906601-9906620 Msa0716480:intron 55.0%
TGCTGGAGCGGCTATTTGCA+CGG + chr5_1:9907014-9907033 Msa0716480:CDS 55.0%
GCTGGATGATAGGAAACGGC+AGG + chr5_1:9907238-9907257 Msa0716480:CDS 55.0%
GCATTAGTGGCAATTGGCGG+GGG + chr5_1:9907712-9907731 Msa0716480:intron 55.0%
CATTAGTGGCAATTGGCGGG+GGG + chr5_1:9907713-9907732 Msa0716480:intron 55.0%
GAAGTCCTGGATCTGCTCGT+TGG - chr5_1:9907933-9907952 None:intergenic 55.0%
! TTCTTTCCACCAGGGCTGGT+GGG + chr5_1:9907984-9908003 Msa0716480:CDS 55.0%
GCGCACAAAGCCTTCCCTTA+TGG + chr5_1:9908422-9908441 Msa0716480:CDS 55.0%
TGCGATCCAAGAGCTTCTCC+AGG - chr5_1:9909017-9909036 None:intergenic 55.0%
TAAAGGGCCTGGATGGGAAG+TGG + chr5_1:9909095-9909114 Msa0716480:CDS 55.0%
! GGAAGTGGTGATGCCAACTG+CGG + chr5_1:9909110-9909129 Msa0716480:CDS 55.0%
CGCGCTCACTGTCAGCTATG+TGG + chr5_1:9906600-9906619 Msa0716480:intron 60.0%
TGCTCGACCGATTGCTGGAG+CGG + chr5_1:9907002-9907021 Msa0716480:CDS 60.0%
TTCCGCCAACGAGCAGATCC+AGG + chr5_1:9907925-9907944 Msa0716480:intron 60.0%
GTCCTGGATCTGCTCGTTGG+CGG - chr5_1:9907930-9907949 None:intergenic 60.0%
CTTCTTTCCACCAGGGCTGG+TGG + chr5_1:9907983-9908002 Msa0716480:CDS 60.0%
TATTCCCAACCCACCAGCCC+TGG - chr5_1:9907996-9908015 None:intergenic 60.0%
GGCATCACCACTTCCCATCC+AGG - chr5_1:9909105-9909124 None:intergenic 60.0%
! TGGTGATGCCAACTGCGGCA+GGG + chr5_1:9909115-9909134 Msa0716480:CDS 60.0%
AGGGGGGAGGATTGAGGGTG+GGG - chr5_1:9905901-9905920 None:intergenic 65.0%
GAGGGGGGAGGATTGAGGGT+GGG - chr5_1:9905902-9905921 None:intergenic 65.0%
GATACAATGGGGGAGGGGGG+AGG - chr5_1:9905914-9905933 None:intergenic 65.0%
! TTCCACCAGGGCTGGTGGGT+TGG + chr5_1:9907988-9908007 Msa0716480:CDS 65.0%
!! TCCACCAGGGCTGGTGGGTT+GGG + chr5_1:9907989-9908008 Msa0716480:CDS 65.0%
! GTGGTGATGCCAACTGCGGC+AGG + chr5_1:9909114-9909133 Msa0716480:CDS 65.0%
GGTGATGCCAACTGCGGCAG+GGG + chr5_1:9909116-9909135 Msa0716480:CDS 65.0%
GTGATGCCAACTGCGGCAGG+GGG + chr5_1:9909117-9909136 Msa0716480:CDS 65.0%
GGGGAGGATTGAGGGTGGGG+GGG - chr5_1:9905898-9905917 None:intergenic 70.0%
GGGGGAGGATTGAGGGTGGG+GGG - chr5_1:9905899-9905918 None:intergenic 70.0%
GGGGGGAGGATTGAGGGTGG+GGG - chr5_1:9905900-9905919 None:intergenic 70.0%
GGAGGGGGGAGGATTGAGGG+TGG - chr5_1:9905903-9905922 None:intergenic 70.0%
GGGGGAGGGGGGAGGATTGA+GGG - chr5_1:9905906-9905925 None:intergenic 70.0%
TGGGGGAGGGGGGAGGATTG+AGG - chr5_1:9905907-9905926 None:intergenic 70.0%
TCCCAACCCACCAGCCCTGG+TGG - chr5_1:9907993-9908012 None:intergenic 70.0%
AGCATGCCCCCTGCCGCAGT+TGG - chr5_1:9909126-9909145 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 9903186 9909525 9903186 ID=Msa0716480;Name=Msa0716480
chr5_1 mRNA 9903186 9909525 9903186 ID=Msa0716480-mRNA-1;Parent=Msa0716480;Name=Msa0716480-mRNA-1;_AED=0.10;_eAED=0.10;_QI=105|1|1|1|0.93|0.87|16|361|750
chr5_1 exon 9903186 9903280 9903186 ID=Msa0716480-mRNA-1:exon:3982;Parent=Msa0716480-mRNA-1
chr5_1 exon 9903384 9903465 9903384 ID=Msa0716480-mRNA-1:exon:3983;Parent=Msa0716480-mRNA-1
chr5_1 exon 9903601 9903837 9903601 ID=Msa0716480-mRNA-1:exon:3984;Parent=Msa0716480-mRNA-1
chr5_1 exon 9904161 9904262 9904161 ID=Msa0716480-mRNA-1:exon:3985;Parent=Msa0716480-mRNA-1
chr5_1 exon 9904528 9904874 9904528 ID=Msa0716480-mRNA-1:exon:3986;Parent=Msa0716480-mRNA-1
chr5_1 exon 9904976 9905165 9904976 ID=Msa0716480-mRNA-1:exon:3987;Parent=Msa0716480-mRNA-1
chr5_1 exon 9905281 9905456 9905281 ID=Msa0716480-mRNA-1:exon:3988;Parent=Msa0716480-mRNA-1
chr5_1 exon 9906196 9906265 9906196 ID=Msa0716480-mRNA-1:exon:3989;Parent=Msa0716480-mRNA-1
chr5_1 exon 9906352 9906541 9906352 ID=Msa0716480-mRNA-1:exon:3990;Parent=Msa0716480-mRNA-1
chr5_1 exon 9906666 9906758 9906666 ID=Msa0716480-mRNA-1:exon:3991;Parent=Msa0716480-mRNA-1
chr5_1 exon 9906951 9907045 9906951 ID=Msa0716480-mRNA-1:exon:3992;Parent=Msa0716480-mRNA-1
chr5_1 exon 9907140 9907259 9907140 ID=Msa0716480-mRNA-1:exon:3993;Parent=Msa0716480-mRNA-1
chr5_1 exon 9907941 9908060 9907941 ID=Msa0716480-mRNA-1:exon:3994;Parent=Msa0716480-mRNA-1
chr5_1 exon 9908149 9908247 9908149 ID=Msa0716480-mRNA-1:exon:3995;Parent=Msa0716480-mRNA-1
chr5_1 exon 9908345 9908455 9908345 ID=Msa0716480-mRNA-1:exon:3996;Parent=Msa0716480-mRNA-1
chr5_1 exon 9908934 9909525 9908934 ID=Msa0716480-mRNA-1:exon:3997;Parent=Msa0716480-mRNA-1
chr5_1 five_prime_UTR 9903186 9903280 9903186 ID=Msa0716480-mRNA-1:five_prime_utr;Parent=Msa0716480-mRNA-1
chr5_1 five_prime_UTR 9903384 9903393 9903384 ID=Msa0716480-mRNA-1:five_prime_utr;Parent=Msa0716480-mRNA-1
chr5_1 CDS 9903394 9903465 9903394 ID=Msa0716480-mRNA-1:cds;Parent=Msa0716480-mRNA-1
chr5_1 CDS 9903601 9903837 9903601 ID=Msa0716480-mRNA-1:cds;Parent=Msa0716480-mRNA-1
chr5_1 CDS 9904161 9904262 9904161 ID=Msa0716480-mRNA-1:cds;Parent=Msa0716480-mRNA-1
chr5_1 CDS 9904528 9904874 9904528 ID=Msa0716480-mRNA-1:cds;Parent=Msa0716480-mRNA-1
chr5_1 CDS 9904976 9905165 9904976 ID=Msa0716480-mRNA-1:cds;Parent=Msa0716480-mRNA-1
chr5_1 CDS 9905281 9905456 9905281 ID=Msa0716480-mRNA-1:cds;Parent=Msa0716480-mRNA-1
chr5_1 CDS 9906196 9906265 9906196 ID=Msa0716480-mRNA-1:cds;Parent=Msa0716480-mRNA-1
chr5_1 CDS 9906352 9906541 9906352 ID=Msa0716480-mRNA-1:cds;Parent=Msa0716480-mRNA-1
chr5_1 CDS 9906666 9906758 9906666 ID=Msa0716480-mRNA-1:cds;Parent=Msa0716480-mRNA-1
chr5_1 CDS 9906951 9907045 9906951 ID=Msa0716480-mRNA-1:cds;Parent=Msa0716480-mRNA-1
chr5_1 CDS 9907140 9907259 9907140 ID=Msa0716480-mRNA-1:cds;Parent=Msa0716480-mRNA-1
chr5_1 CDS 9907941 9908060 9907941 ID=Msa0716480-mRNA-1:cds;Parent=Msa0716480-mRNA-1
chr5_1 CDS 9908149 9908247 9908149 ID=Msa0716480-mRNA-1:cds;Parent=Msa0716480-mRNA-1
chr5_1 CDS 9908345 9908455 9908345 ID=Msa0716480-mRNA-1:cds;Parent=Msa0716480-mRNA-1
chr5_1 CDS 9908934 9909164 9908934 ID=Msa0716480-mRNA-1:cds;Parent=Msa0716480-mRNA-1
chr5_1 three_prime_UTR 9909165 9909525 9909165 ID=Msa0716480-mRNA-1:three_prime_utr;Parent=Msa0716480-mRNA-1
Gene Sequence

>Msa0716480

ATGGATTCCAAGAACAATGTGAAGAACGACGATCCTGCAGTGGAATCACCAACTTCAGTCCTAGAAGAAGAGGAAGTGGAGGTGAAATCGGAGGAAGAGGTGATTGCAGATGATGTGTCATCGCTTGTACCGAAAACAATGGCTGAGGAAGAAGAGAAGTTGCTGAAAGCTCGTGCAAAGGAAGAAGAGGAAAAGATTGAAGTTGCGCCGAATCTGAATGATTCACAGTTTAATAAGTTGGATGAGCTTTTGACACAGACTAAACTCTACTCAGAGTTTCTTTTGGAGAAAATGGATGATATTACAATGGCTGCGGGTGAACAAGAGAAACCGGATGAAGAAGAGAGTAAACTGGTTGCAAAAAAGAAGGGCCGTGGATCAAAAAGAAAGGCAGCCTCACAATGCAATACTGGAAAAGCCAAAAAGGCAGTTGAAGCCATGATTACAAGATCTAAAGAAAATGTGAAGACTGAGGATGTGGATTTGACCGAGGAAGAAAGAACTGAGAAAGAGCAGAGGGAGCTGATGCCTTTACTAACTGGTGGAAAATTGAAATCTTATCAACTGAAGGGTGTTAAGTGGTTGATTTCCTTGTGGCAAAATGGATTGAATGGGATTCTTGCTGATCAAATGGGTCTTGGGAAGACAATCCAAACAATTGGGTTTCTTTCTCATCTAAAATCGAAAGGATTGGATGGGCCATATATGATAATTGCTCCTCTATCAACCCTCTCCAATTGGATGAATGAGATTAATAGGTTTACACCAACGCTCCCTGCTGTTATCTACCATGGTAACAAATATCAGAGAGATGAAATCAGAAGGAAACATATGCCTAGAACAGTTGGCCCAAAATTCCCTCTAGTAATAACTTCTTATGAGATTGCTATGAATGATGCTAAGAAGTGTTTAAGGTCATACAGTTGGAAGTATCTTGTTGTTGATGAGGGACACAGGCTGAAAAATGCCAACTGCAAATTAGTGAGGATGTTGAAATACATCAGTGTTGAAAATAAGCTTCTTTTGACTGGTACACCGCTCCAGAATAACTTGGCTGAGCTATGGTCACTGCTGCACTTCATCTTACCTGATATATTCTCATCTCTTGAAGAATTTGAGTCATGGTTTAACCTGTCGGGAAAGAGCACTACTGGAGCAACAATGGAAGAGTTGGAAGAGAAAAGAAGAACCCAAGTTGTGGCCAAGCTTCATTCAATTCTTAGGCCATTTCTGTTGCGTAGGATGAAGTCTGATGTTGAGCTAATGTTGCCACGGAAAAAAGAGATCATTGTTTATGCCAACATGACTGAGCATCAGAAGAACTTGCAGGATCATTTAATTAATGAGACACTGGAGAAATATTTGGACAAGAAACGATCAGTTGGACGTGCTCCAACAAGTCTTAATAATTTGGTTATTCAGCTAAGAAAAGTCTGTAACCATCCTGACCTCTTAGAATCAGTCTTTGATGGTTCATATTTTTATCCTCCTGTGAATGAGATAATTGAAAAATGTGGAAAATTTCAATTGCTCGACCGATTGCTGGAGCGGCTATTTGCACGGAATCACAAGGTTCTGATCTTCAGTCAGTGGACCAAAGTGCTAGATATAATGGATTATTATTTTAGTGAAAAGGGTTTCGAAGTTTGCAGGATTGATGGTTCGGTGAAGCTGGATGATAGGAAACGGCAGATCCAGGACTTCAATGATACAACCAGCAACTGCAGAATCTTTCTTCTTTCCACCAGGGCTGGTGGGTTGGGAATAAACCTCACTGCAGCTGACACTTGTATTCTTTATGACAGTGACTGGAATCCTCAAATGGATTTACAGGCCATGGATAGATGTCACAGAATCGGTCAAACAAAGCCTGTTCATGTTTACAGGCTCGCTACTGCACAATCAGTAGAGGGTCGGATGTTGAAAAGAGCTTTCAGCAAGTTGAAGCTTGAGCATGTGGTGATAGAGAAAGGACAATTTCATCAGGAGCGCACAAAGCCTTCCCTTATGGATGAAATGGAGGAAGAGGATGTTTTGGCATTGCTTCGAGATGAAGAAACCGCTGAGGACAAAATGATACAGAAAGATATTAGTGATGAAGACCTGGAGAAGCTCTTGGATCGCAGCGATCTTGTTATCAATAGCTCAACTGATGATAAAGCTGCAGTTAGTACCTTTTCTCTTAAAGGGCCTGGATGGGAAGTGGTGATGCCAACTGCGGCAGGGGGCATGCTTTCCACTCTCAACAGCTAA
Protein sequence

>Msa0716480

MDSKNNVKNDDPAVESPTSVLEEEEVEVKSEEEVIADDVSSLVPKTMAEEEEKLLKARAKEEEEKIEVAPNLNDSQFNKLDELLTQTKLYSEFLLEKMDDITMAAGEQEKPDEEESKLVAKKKGRGSKRKAASQCNTGKAKKAVEAMITRSKENVKTEDVDLTEEERTEKEQRELMPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKSKGLDGPYMIIAPLSTLSNWMNEINRFTPTLPAVIYHGNKYQRDEIRRKHMPRTVGPKFPLVITSYEIAMNDAKKCLRSYSWKYLVVDEGHRLKNANCKLVRMLKYISVENKLLLTGTPLQNNLAELWSLLHFILPDIFSSLEEFESWFNLSGKSTTGATMEELEEKRRTQVVAKLHSILRPFLLRRMKSDVELMLPRKKEIIVYANMTEHQKNLQDHLINETLEKYLDKKRSVGRAPTSLNNLVIQLRKVCNHPDLLESVFDGSYFYPPVNEIIEKCGKFQLLDRLLERLFARNHKVLIFSQWTKVLDIMDYYFSEKGFEVCRIDGSVKLDDRKRQIQDFNDTTSNCRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRMLKRAFSKLKLEHVVIEKGQFHQERTKPSLMDEMEEEDVLALLRDEETAEDKMIQKDISDEDLEKLLDRSDLVINSSTDDKAAVSTFSLKGPGWEVVMPTAAGGMLSTLNS*