AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0709200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0709200 MtrunA17_Chr8g0381871 99.401 835 5 0 1 835 1 835 0.0 1717
Msa0709200 MtrunA17_Chr2g0296441 76.060 802 141 7 1 789 1 764 0.0 1234
Msa0709200 MtrunA17_Chr4g0035581 36.177 586 324 10 77 653 197 741 1.11e-115 371
Msa0709200 MtrunA17_Chr7g0269941 37.963 540 283 9 119 652 145 638 1.07e-113 362
Msa0709200 MtrunA17_Chr4g0065401 33.234 671 369 13 20 662 39 658 3.97e-103 335
Msa0709200 MtrunA17_Chr4g0052131 31.034 754 399 17 20 713 15 707 5.22e-100 328
Msa0709200 MtrunA17_Chr4g0068511 33.080 659 369 12 20 657 220 827 3.47e-98 327
Msa0709200 MtrunA17_Chr7g0263661 30.921 608 329 14 106 653 129 705 5.94e-88 296
Msa0709200 MtrunA17_Chr2g0279361 34.358 553 298 16 113 653 116 615 1.54e-79 270
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0709200 AT5G44635.1 73.477 837 214 4 1 835 1 831 0.0 1285
Msa0709200 AT5G44635.2 71.379 863 213 5 1 835 1 857 0.0 1273
Msa0709200 AT2G16440.1 34.962 655 370 13 16 653 133 748 2.48e-116 374
Msa0709200 AT4G02060.2 38.235 544 284 9 119 656 143 640 2.42e-115 367
Msa0709200 AT4G02060.1 38.235 544 284 9 119 656 143 640 2.42e-115 367
Msa0709200 AT2G07690.1 33.284 670 376 11 16 662 31 652 1.43e-101 331
Msa0709200 AT2G07690.2 33.333 672 371 13 16 662 31 650 3.56e-100 327
Msa0709200 AT5G46280.3 32.107 707 358 16 10 662 5 643 4.32e-100 326
Msa0709200 AT1G44900.2 32.787 671 377 13 10 657 210 829 1.04e-99 331
Msa0709200 AT1G44900.1 32.787 671 377 13 10 657 212 831 1.46e-99 331
Msa0709200 AT5G46280.1 32.107 707 358 16 10 662 5 643 4.36e-99 326
Msa0709200 AT5G46280.2 32.258 682 340 16 10 637 5 618 9.34e-97 315
Msa0709200 AT3G09660.2 31.833 600 328 15 106 653 131 701 1.61e-90 302
Msa0709200 AT3G09660.3 32.161 597 327 15 106 653 131 698 2.07e-90 303
Msa0709200 AT3G09660.1 31.833 600 328 15 106 653 131 701 4.19e-90 302
Msa0709200 AT5G46280.4 32.019 634 309 15 10 589 5 570 1.18e-88 292
Msa0709200 AT2G14050.1 30.076 655 377 22 20 653 22 616 2.86e-73 253
Msa0709200 AT2G14050.2 30.076 655 377 22 20 653 22 616 3.57e-73 252

Find 206 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTATAATTGCTTTAATT+TGG 0.072017 5_1:+331800 None:intergenic
ATACAAAACTCTCCAGTTTC+TGG 0.160572 5_1:+334216 None:intergenic
ACAAGATTGATTAGTTAAAT+TGG 0.199581 5_1:+331210 None:intergenic
TGTGAGGGGCCTTAGGGCTT+TGG 0.214668 5_1:-335174 Msa0709200:CDS
CCACCAAGTTGCTGCAATAT+TGG 0.216905 5_1:+331502 None:intergenic
GGAAGCATTCGGTGGTTATT+TGG 0.231370 5_1:-336606 Msa0709200:CDS
CTCTATAATTGCTTTAATTT+GGG 0.252599 5_1:+331801 None:intergenic
GAAACCTAACTTCCAAAGTT+TGG 0.267938 5_1:+336658 None:intergenic
CAACGCAAGGGTGCTTCATC+TGG 0.270964 5_1:-335206 Msa0709200:CDS
GTGAGGGGCCTTAGGGCTTT+GGG 0.275142 5_1:-335173 Msa0709200:CDS
AGCAACGGGATTTGATTAAA+TGG 0.286323 5_1:-331888 Msa0709200:CDS
TTTCCCAAACTTTGGAAGTT+AGG 0.303274 5_1:-336662 Msa0709200:five_prime_UTR
CTCTCCAGTTTCTGGTTCCT+TGG 0.319235 5_1:+334224 None:intergenic
TTCAACCGATTCAGCGAAAA+TGG 0.322211 5_1:-336627 Msa0709200:exon
TGCTGCAAACTTCTATAATA+AGG 0.322371 5_1:-332617 Msa0709200:intron
ATATTATTGTCTTCATTTAC+AGG 0.324293 5_1:-331354 Msa0709200:three_prime_UTR
GCAACGTTGATATCCTTGTT+AGG 0.332960 5_1:+336087 None:intergenic
ATGAAGGTGTGAGGGGCCTT+AGG 0.335308 5_1:-335181 Msa0709200:CDS
CATGAAGGCATCAGCCTTAG+AGG 0.337585 5_1:-334466 Msa0709200:CDS
GACATAAACGTTTGTATTGT+TGG 0.339761 5_1:-334442 Msa0709200:CDS
TACTAATCAACAACATAATT+AGG 0.340256 5_1:+331571 None:intergenic
CTCCATAACAAACCTCTTGC+AGG 0.345294 5_1:+336140 None:intergenic
GTTAAAACCTTCTTGCATTA+CGG 0.350902 5_1:+332172 None:intergenic
AAACCTAACTTCCAAAGTTT+GGG 0.354634 5_1:+336659 None:intergenic
AATTGTCATACCTGATATAT+TGG 0.355144 5_1:-335276 Msa0709200:CDS
GACAATTGGAATGTTATAGA+AGG 0.359993 5_1:+336065 None:intergenic
TGGTAATCTGTAACATCGTC+TGG 0.365977 5_1:+333123 None:intergenic
TGAATATACCTCTTGACAAT+TGG 0.372562 5_1:+336051 None:intergenic
AATCAGTAAATTTGCTCTCT+TGG 0.374951 5_1:+335547 None:intergenic
TGGCTCTCTGCCTAGGTCAT+TGG 0.375729 5_1:-335481 Msa0709200:CDS
TCTTGGTAATGCTGGAAAAC+TGG 0.376020 5_1:-331452 Msa0709200:three_prime_UTR
GGTAGGCTTGTATCTGTAAC+AGG 0.380034 5_1:-335857 Msa0709200:CDS
GGCAGTTGGAAGCTTTAATC+AGG 0.381387 5_1:-332801 Msa0709200:CDS
CTTGCCGCTGCCAACCCTGC+TGG 0.383099 5_1:-333331 Msa0709200:CDS
CACCAAGTTGCTGCAATATT+GGG 0.384610 5_1:+331503 None:intergenic
CCAGATGTATACACAGATCT+TGG 0.385985 5_1:+334285 None:intergenic
ACAAGCTTGGTGAAGAAATC+TGG 0.391646 5_1:+334577 None:intergenic
AGAAACCATTTCCCAAACTT+TGG 0.399013 5_1:-336670 Msa0709200:five_prime_UTR
ATTGCAGGAAGTGGCTTAGC+TGG 0.400192 5_1:-331916 Msa0709200:intron
AAACGTTTATGTCCCCTCTA+AGG 0.400315 5_1:+334452 None:intergenic
CAAGCAGCATCAGAAGCTGC+TGG 0.400775 5_1:-331646 Msa0709200:CDS
GTTGCCAAGGAACCAGAAAC+TGG 0.401643 5_1:-334228 Msa0709200:CDS
TTCCACCGGCTATACTTTCA+AGG 0.402725 5_1:-333176 Msa0709200:CDS
GGCCATTGCAAGGTGTCATC+TGG 0.403603 5_1:-332770 Msa0709200:CDS
TGCCTGCAAGAGGTTTGTTA+TGG 0.403641 5_1:-336142 Msa0709200:CDS
CTGTTGTTACATGTAGCATT+TGG 0.405390 5_1:+335591 None:intergenic
GATTTAACAGGCTCAGGAAC+TGG 0.406162 5_1:-334626 Msa0709200:intron
CCAAGATCTGTGTATACATC+TGG 0.406994 5_1:-334285 Msa0709200:CDS
CTAGTAGTGATGAAAGAGTT+TGG 0.407626 5_1:-331546 Msa0709200:three_prime_UTR
CCAAATTAAAGCAATTATAG+AGG 0.410633 5_1:-331800 Msa0709200:intron
CAAACTCTTTCATCACTACT+AGG 0.412297 5_1:+331547 None:intergenic
AACTTCCAAAGTTTGGGAAA+TGG 0.413854 5_1:+336665 None:intergenic
AAGAGAGCAAATTTACTGAT+TGG 0.413990 5_1:-335545 Msa0709200:CDS
TTGCAGGCATTCTGCAAGTA+AGG 0.418482 5_1:+336156 None:intergenic
GAAGCCAACGCCAATATATC+AGG 0.418612 5_1:+335266 None:intergenic
CTAGACACTTGAAAGTTCCT+TGG 0.427198 5_1:+335795 None:intergenic
CGACATTCTGATCTCTCTCC+AGG 0.428347 5_1:+335242 None:intergenic
GGAAAGTCATCATCTGCTGC+TGG 0.432241 5_1:-334264 Msa0709200:CDS
CAACGTTGATATCCTTGTTA+GGG 0.439564 5_1:+336088 None:intergenic
AAGGTGTCATCTGGATAATC+AGG 0.447002 5_1:-332761 Msa0709200:intron
AAGACGCATGACAAGGGCCT+TGG 0.449057 5_1:+332211 None:intergenic
TGAAGGTGTGAGGGGCCTTA+GGG 0.453292 5_1:-335180 Msa0709200:CDS
AAAATCAATGAACATGGTGT+TGG 0.455706 5_1:+336348 None:intergenic
TTGCATATCGGATGACAGTT+AGG 0.457504 5_1:-332822 Msa0709200:CDS
TGGATCACCAGTTTCAGATC+TGG 0.457654 5_1:-336427 Msa0709200:intron
ATATTGGCGTTGGCTTCCCC+TGG 0.469082 5_1:-335260 Msa0709200:CDS
AGCTACACTTTCAACAAGCT+TGG 0.470042 5_1:+334564 None:intergenic
GTAGCATTTGGACAAATTGT+TGG 0.476872 5_1:+335603 None:intergenic
AAAGTTCCTTGGAGAAGCTC+AGG 0.479407 5_1:+335806 None:intergenic
TTATCATACCGTCCTCCAGC+AGG 0.479460 5_1:+333316 None:intergenic
CGTAGAGCTGATACAAATCC+TGG 0.483403 5_1:-332853 Msa0709200:CDS
TGAGTTTCAAGATCAAGATA+TGG 0.484842 5_1:-332480 Msa0709200:CDS
GAACATGTTATTACCTTCAG+TGG 0.489503 5_1:+333286 None:intergenic
AGGGTTGGCAGCGGCAAGAA+TGG 0.489803 5_1:+333336 None:intergenic
AGCTGGAAACTCTACTGCTC+AGG 0.490744 5_1:-332405 Msa0709200:CDS
CTATCTCTGATGAATATTTG+AGG 0.491103 5_1:-336288 Msa0709200:intron
TCCTTCTTATGCTAATGAGT+GGG 0.491510 5_1:-334504 Msa0709200:CDS
CCAATATTGCAGCAACTTGG+TGG 0.493219 5_1:-331502 Msa0709200:three_prime_UTR
GGTTGATGAGAAAGCCGTTA+GGG 0.498327 5_1:-336585 Msa0709200:CDS
TGGCTACATCAGAGATTGGT+AGG 0.504042 5_1:-335874 Msa0709200:CDS
TCAAGTGTCTAGAATGTGGT+GGG 0.506639 5_1:-335784 Msa0709200:CDS
GTAGAAGAGAAATAGACATC+AGG 0.506918 5_1:-335003 Msa0709200:CDS
CAAGATGGACATAAGAGATC+AGG 0.507764 5_1:-333516 Msa0709200:intron
TGGTTGATGAGAAAGCCGTT+AGG 0.508472 5_1:-336586 Msa0709200:CDS
AACGATGCTGATGGTCAAGC+TGG 0.508931 5_1:-332422 Msa0709200:CDS
CTGATACAAATCCTGGCAGT+AGG 0.511503 5_1:-332846 Msa0709200:CDS
CTGGCAGTAGGGTTGCATAT+CGG 0.513097 5_1:-332834 Msa0709200:CDS
ATGAGATTGTAGAACATGCT+AGG 0.515340 5_1:-335443 Msa0709200:CDS
GTCAGCAAGCATCAAAGCGC+CGG 0.518628 5_1:+333568 None:intergenic
CCCCACTCATTAGCATAAGA+AGG 0.518823 5_1:+334503 None:intergenic
GTCCCAATATTGCAGCAACT+TGG 0.520031 5_1:-331505 Msa0709200:three_prime_UTR
CAAGATATGGACGAAGAAGC+AGG 0.521607 5_1:-332467 Msa0709200:CDS
GTCAGATGCAAGAAAACTAC+TGG 0.521796 5_1:-332896 Msa0709200:CDS
TCCTCCAGCAGGGTTGGCAG+CGG 0.522459 5_1:+333327 None:intergenic
ACTATTAGTATCACAAAAGC+AGG 0.523615 5_1:-333388 Msa0709200:CDS
CAAATTTACTGATTGGCAAA+GGG 0.525128 5_1:-335538 Msa0709200:CDS
TAATTACAGTTCCGTGGAGG+AGG 0.526353 5_1:-331839 Msa0709200:CDS
CTTAGCTGGGATGAAGCAAC+GGG 0.528915 5_1:-331902 Msa0709200:CDS
GCAAATTTACTGATTGGCAA+AGG 0.529371 5_1:-335539 Msa0709200:CDS
AGAGCCAGCAGGTATCTCAT+TGG 0.529743 5_1:+335497 None:intergenic
CATACCTGATATATTGGCGT+TGG 0.531733 5_1:-335270 Msa0709200:CDS
GAATTGGCTACATCAGAGAT+TGG 0.532287 5_1:-335878 Msa0709200:CDS
CATTGATGAATTTGACAAGA+TGG 0.532365 5_1:-333531 Msa0709200:CDS
GGTTGCAATTCATGAGGCTA+TGG 0.533064 5_1:-333419 Msa0709200:CDS
GGTGCTTCATCTGGGAATGA+AGG 0.533732 5_1:-335197 Msa0709200:CDS
ATCTGGGAATGAAGGTGTGA+GGG 0.535862 5_1:-335189 Msa0709200:CDS
TGCTAGAAATGATAGAACTT+TGG 0.535930 5_1:-331602 Msa0709200:CDS
GCTTTGATGCTTGCTGACAA+TGG 0.535963 5_1:-333563 Msa0709200:CDS
GAAAGTCATCATCTGCTGCT+GGG 0.536220 5_1:-334263 Msa0709200:CDS
CGATATGCAACCCTACTGCC+AGG 0.536524 5_1:+332835 None:intergenic
TTGGCAAAGGGTCAGAATGC+AGG 0.537253 5_1:-335526 Msa0709200:CDS
GCCGCTGCCAACCCTGCTGG+AGG 0.537734 5_1:-333328 Msa0709200:CDS
TACCTGCTGGCTCTCTGCCT+AGG 0.538550 5_1:-335488 Msa0709200:CDS
CAGGAAGCCGCTGGAACCAA+TGG 0.541233 5_1:-332386 Msa0709200:intron
CTCTGACTCCCAAAGCCCTA+AGG 0.541676 5_1:+335165 None:intergenic
GTACAATGTGGCTCTTCCAC+CGG 0.541952 5_1:-333190 Msa0709200:CDS
AACGCAAGGGTGCTTCATCT+GGG 0.544757 5_1:-335205 Msa0709200:CDS
TCAGCGAAAATGGAAGCATT+CGG 0.548151 5_1:-336617 Msa0709200:exon
AGACATCAGGAATAGAAAGA+AGG 0.549012 5_1:-334990 Msa0709200:CDS
TAGGGAAGCTTCTCAACGCA+AGG 0.550312 5_1:-335219 Msa0709200:CDS
ATGAAGGCATCAGCCTTAGA+GGG 0.551495 5_1:-334465 Msa0709200:CDS
CTGCCAACCCTGCTGGAGGA+CGG 0.553709 5_1:-333324 Msa0709200:CDS
TGGATGAAGTTCAAAGAATG+AGG 0.554379 5_1:-334606 Msa0709200:CDS
ACTGAAAAGTTTGATGATGT+TGG 0.559671 5_1:-331407 Msa0709200:three_prime_UTR
AGTTCTGCTGTAGTGAACGT+TGG 0.559838 5_1:+333048 None:intergenic
TTCAACTTTCGCCTCCTCCA+CGG 0.560026 5_1:+331828 None:intergenic
TGATCGTGATAGATGATGGC+AGG 0.560237 5_1:-331669 Msa0709200:CDS
GAGAGAGATCAGAATGTCGT+AGG 0.562049 5_1:-335238 Msa0709200:CDS
TTGCAGGAAGTGGCTTAGCT+GGG 0.562532 5_1:-331915 Msa0709200:intron
TCGGATGACAGTTAGGCAGT+TGG 0.563427 5_1:-332815 Msa0709200:CDS
CAGGATTTGTATCAGCTCTA+CGG 0.565166 5_1:+332854 None:intergenic
AAGTGAAAATGATTAACTAC+AGG 0.565779 5_1:+331262 None:intergenic
AATTGAGACTTTGCACAGCT+AGG 0.566095 5_1:+334415 None:intergenic
TTCTTTGTTTCAGTACAATG+TGG 0.566629 5_1:-333202 Msa0709200:intron
CATTTGATCGTGATAGATGA+TGG 0.566869 5_1:-331673 Msa0709200:CDS
ACTTGCAGAATGCCTGCAAG+AGG 0.569621 5_1:-336152 Msa0709200:CDS
TCAAACCTTGAAAGTATAGC+CGG 0.573082 5_1:+333171 None:intergenic
GACCTAGGCAGAGAGCCAGC+AGG 0.575423 5_1:+335486 None:intergenic
GGAAGCTTTAATCAGGCTGT+CGG 0.576059 5_1:-332794 Msa0709200:CDS
TAACTGATGAATACTTTCAA+AGG 0.576649 5_1:-332238 Msa0709200:CDS
GCTTAGCTGGGATGAAGCAA+CGG 0.577228 5_1:-331903 Msa0709200:CDS
ATACCGTCCTCCAGCAGGGT+TGG 0.577304 5_1:+333321 None:intergenic
TATTATTGTCTTCATTTACA+GGG 0.578919 5_1:-331353 Msa0709200:three_prime_UTR
GGTTTGTTCCAGATTTGTGA+TGG 0.579414 5_1:-335025 Msa0709200:intron
AGAGAGATCAGAATGTCGTA+GGG 0.583410 5_1:-335237 Msa0709200:CDS
GACATTCTGATCTCTCTCCA+GGG 0.583538 5_1:+335243 None:intergenic
TGATAAGTCTAAACCACTGA+AGG 0.585685 5_1:-333299 Msa0709200:intron
ATAACATTCCAATTGTCAAG+AGG 0.586980 5_1:-336059 Msa0709200:intron
ATTTAAGAGTTGAACGATGT+CGG 0.588280 5_1:-331323 Msa0709200:three_prime_UTR
CACCTCACCATTGGTTCCAG+CGG 0.588414 5_1:+332379 None:intergenic
TAAAAGCAAGTCGGTAGGAG+AGG 0.589366 5_1:+335141 None:intergenic
ACGTCCAATGAGATACCTGC+TGG 0.590348 5_1:-335501 Msa0709200:CDS
CCTTCTTATGCTAATGAGTG+GGG 0.592758 5_1:-334503 Msa0709200:CDS
ATGTAACAACAGAGCAAAGT+GGG 0.595789 5_1:-335580 Msa0709200:CDS
ATAACGAACCTGAACAGAGT+TGG 0.596640 5_1:+335115 None:intergenic
TCTACTGCTCAGGAAGCCGC+TGG 0.597751 5_1:-332395 Msa0709200:CDS
CTGTAACAGGAGTGGTGACA+AGG 0.599917 5_1:-335844 Msa0709200:CDS
GGCTGTCGGAGGCCATTGCA+AGG 0.600168 5_1:-332780 Msa0709200:CDS
AAATGATAGAACTTTGGCTG+TGG 0.600445 5_1:-331596 Msa0709200:CDS
TGATACAAATCCTGGCAGTA+GGG 0.600996 5_1:-332845 Msa0709200:CDS
GTTCACAAATCTACTCATGA+AGG 0.603800 5_1:-334481 Msa0709200:CDS
TGAGATTGTAGAACATGCTA+GGG 0.603809 5_1:-335442 Msa0709200:CDS
GTTCGACCTGAGCTTCTCCA+AGG 0.607207 5_1:-335812 Msa0709200:CDS
CATCTGGGAATGAAGGTGTG+AGG 0.608451 5_1:-335190 Msa0709200:CDS
ATCCAGATGACACCTTGCAA+TGG 0.610507 5_1:+332768 None:intergenic
AAGCTTGCAGCTCAAGACAC+AGG 0.613087 5_1:+331476 None:intergenic
GCGAAAATGGAAGCATTCGG+TGG 0.613597 5_1:-336614 Msa0709200:exon
ATTGTAGAACATGCTAGGGC+TGG 0.615899 5_1:-335438 Msa0709200:CDS
TTCAAGTGTCTAGAATGTGG+TGG 0.616955 5_1:-335785 Msa0709200:CDS
GCTGTCTAAGACGCATGACA+AGG 0.617928 5_1:+332204 None:intergenic
AGCTTTAATCAGGCTGTCGG+AGG 0.618052 5_1:-332791 Msa0709200:CDS
ATCCTTCTTATGCTAATGAG+TGG 0.618694 5_1:-334505 Msa0709200:CDS
ATTGAAGGTTGCAATTCATG+AGG 0.621895 5_1:-333425 Msa0709200:intron
GTTGACTGCAACTGTTGCCA+AGG 0.630299 5_1:-334241 Msa0709200:CDS
GGTAATCTGTAACATCGTCT+GGG 0.631041 5_1:+333124 None:intergenic
GGCAATAAAAGCAAGTCGGT+AGG 0.631539 5_1:+335136 None:intergenic
GAGGAGACCGTAATGCAAGA+AGG 0.631602 5_1:-332179 Msa0709200:intron
AATGATAATAACGATGCTGA+TGG 0.632424 5_1:-332431 Msa0709200:CDS
AGAATAACATCCAATGACCT+AGG 0.632771 5_1:+335471 None:intergenic
ACTGCTAAACGAACATGACG+AGG 0.634306 5_1:+332645 None:intergenic
GAATGAACTTTATTACGAAG+CGG 0.634597 5_1:-336398 Msa0709200:CDS
CAAGTGTCTAGAATGTGGTG+GGG 0.638582 5_1:-335783 Msa0709200:CDS
GAAGAAGCAGGTAGTGACGA+TGG 0.642853 5_1:-332455 Msa0709200:CDS
TCTGGGAATGAAGGTGTGAG+GGG 0.644966 5_1:-335188 Msa0709200:CDS
CTGTCTAAGACGCATGACAA+GGG 0.646104 5_1:+332205 None:intergenic
ATGTTCAAAATCAATGAACA+TGG 0.646880 5_1:+336342 None:intergenic
CCAGTTTCAGATCTGGACAA+AGG 0.648235 5_1:-336420 Msa0709200:intron
TTATCATCAGAAATGAATGT+CGG 0.648409 5_1:+336111 None:intergenic
AACCTTGAAAGTATAGCCGG+TGG 0.648631 5_1:+333174 None:intergenic
AGGGAAGCTTCTCAACGCAA+GGG 0.651545 5_1:-335218 Msa0709200:CDS
ACTTTCAAGTGTCTAGAATG+TGG 0.654394 5_1:-335788 Msa0709200:CDS
TATCATACCGTCCTCCAGCA+GGG 0.656611 5_1:+333317 None:intergenic
AAGTTGCTGCAATATTGGGA+CGG 0.658779 5_1:+331507 None:intergenic
GCACAATATGAGAAGCTATG+TGG 0.660506 5_1:+333103 None:intergenic
TTCTGATGATAACCCTAACA+AGG 0.660674 5_1:-336100 Msa0709200:CDS
GCTTGTATCTGTAACAGGAG+TGG 0.662884 5_1:-335852 Msa0709200:CDS
TGAAGGCATCAGCCTTAGAG+GGG 0.664188 5_1:-334464 Msa0709200:CDS
AGTGGTGACAAGGACAAGTG+AGG 0.666415 5_1:-335834 Msa0709200:CDS
CATGCGTCTTAGACAGCACG+AGG 0.667096 5_1:-332198 Msa0709200:CDS
CATGTAACAACAGAGCAAAG+TGG 0.668775 5_1:-335581 Msa0709200:CDS
AGTTGGCAATAAAAGCAAGT+CGG 0.673960 5_1:+335132 None:intergenic
ACATTCTGATCTCTCTCCAG+GGG 0.682522 5_1:+335244 None:intergenic
ATTGGGACGGCGAAACAACG+TGG 0.688824 5_1:+331520 None:intergenic
AAATAATTACAGTTCCGTGG+AGG 0.693918 5_1:-331842 Msa0709200:CDS
ACAGCAATTCAAGTATACTG+AGG 0.742350 5_1:-335744 Msa0709200:intron
ATACTTTCAAAGGATCACCA+AGG 0.772896 5_1:-332228 Msa0709200:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGTTTTAAATTTCTATTT+TGG - chr5_1:335318-335337 Msa0709200:intron 10.0%
!!! TTGTTTTAAATTTCTATTTT+GGG - chr5_1:335319-335338 Msa0709200:intron 10.0%
!!! TTAAATTCTAAAATTTATTC+AGG - chr5_1:335824-335843 Msa0709200:CDS 10.0%
!! AAAGAAATTAGTATATTTAT+TGG - chr5_1:336143-336162 Msa0709200:CDS 10.0%
!! AATTTCAATAAAAATCCAAT+TGG + chr5_1:331643-331662 None:intergenic 15.0%
!! CAAAATAATACCAAATTATA+GGG + chr5_1:331673-331692 None:intergenic 15.0%
!!! CTATAATTTGGTATTATTTT+GGG - chr5_1:331672-331691 Msa0709200:CDS 15.0%
!!! TTATTCATAATTTAAGACTA+CGG + chr5_1:332208-332227 None:intergenic 15.0%
!! GTCTTAAATTATGAATAATA+CGG - chr5_1:332210-332229 Msa0709200:CDS 15.0%
!! AATAGATTGATAAATATTAG+GGG + chr5_1:333131-333150 None:intergenic 15.0%
!! CAATAGATTGATAAATATTA+GGG + chr5_1:333132-333151 None:intergenic 15.0%
!!! TTTTATGCTATACTTTATAT+CGG + chr5_1:334151-334170 None:intergenic 15.0%
!! TTTATATAAACAAATCTCAA+AGG + chr5_1:335883-335902 None:intergenic 15.0%
!! TTGTTTATATAAAACAATGT+CGG - chr5_1:335890-335909 Msa0709200:intron 15.0%
!! AAATATACTAATTTCTTTGA+AGG + chr5_1:336141-336160 None:intergenic 15.0%
!!! TAATTGTTTCTGTTTTGTTT+TGG - chr5_1:331448-331467 Msa0709200:three_prime_UTR 20.0%
!! CCAAAATAATACCAAATTAT+AGG + chr5_1:331674-331693 None:intergenic 20.0%
!!! CCTATAATTTGGTATTATTT+TGG - chr5_1:331671-331690 Msa0709200:CDS 20.0%
!!! GTATTTTAATTTGCAAATTG+AGG - chr5_1:331911-331930 Msa0709200:CDS 20.0%
!!! TATTCATAATTTAAGACTAC+GGG + chr5_1:332207-332226 None:intergenic 20.0%
!! AATGTAAACTTTATGGAATT+TGG - chr5_1:332536-332555 Msa0709200:intron 20.0%
!!! TGATAAATATGTTTTCTGTA+TGG - chr5_1:332849-332868 Msa0709200:CDS 20.0%
!! ATAGATTGATAAATATTAGG+GGG + chr5_1:333130-333149 None:intergenic 20.0%
!! GCAATAGATTGATAAATATT+AGG + chr5_1:333133-333152 None:intergenic 20.0%
!! ATTTGATAAAGCACAATAAT+AGG - chr5_1:333937-333956 Msa0709200:intron 20.0%
!! GATAAAATTTACTTATTCAC+TGG - chr5_1:335573-335592 Msa0709200:CDS 20.0%
!!! TACAGTAGATTTTTTTCTTT+GGG + chr5_1:335639-335658 None:intergenic 20.0%
!!! TTACAGTAGATTTTTTTCTT+TGG + chr5_1:335640-335659 None:intergenic 20.0%
!!! AATTATTTTTCTCATTTTGC+TGG + chr5_1:336041-336060 None:intergenic 20.0%
!!! CTCTATAATTGCTTTAATTT+GGG + chr5_1:336097-336116 None:intergenic 20.0%
!! TACTAATCAACAACATAATT+AGG + chr5_1:336327-336346 None:intergenic 20.0%
!! ATATTATTGTCTTCATTTAC+AGG - chr5_1:336541-336560 Msa0709200:intron 20.0%
!! TATTATTGTCTTCATTTACA+GGG - chr5_1:336542-336561 Msa0709200:intron 20.0%
!!! ACAAGATTGATTAGTTAAAT+TGG + chr5_1:336688-336707 None:intergenic 20.0%
!! CTTTCTTAGATTTTCTCAAA+AGG - chr5_1:331342-331361 Msa0709200:three_prime_UTR 25.0%
! ATGTTCAAAATCAATGAACA+TGG + chr5_1:331556-331575 None:intergenic 25.0%
!!! TGAGGTATTTTTTTTCCAAT+TGG - chr5_1:331625-331644 Msa0709200:CDS 25.0%
! ATTACTGAAACCCTATAATT+TGG - chr5_1:331660-331679 Msa0709200:CDS 25.0%
! TTATCATCAGAAATGAATGT+CGG + chr5_1:331787-331806 None:intergenic 25.0%
! TAACGAAATGAAAACGAAAT+TGG + chr5_1:331878-331897 None:intergenic 25.0%
! TTGAAAAGTTAAAGCAGATT+CGG + chr5_1:332506-332525 None:intergenic 25.0%
! GTACTGAAATGTAAACTTTA+TGG - chr5_1:332529-332548 Msa0709200:intron 25.0%
! AATTGTCATACCTGATATAT+TGG - chr5_1:332619-332638 Msa0709200:CDS 25.0%
! AATGTGAACTCAAAATCAAA+CGG + chr5_1:332997-333016 None:intergenic 25.0%
!!! GGCTTTAATCTACATATTTT+AGG - chr5_1:333082-333101 Msa0709200:CDS 25.0%
! AAAGAAAAATGAACAGGTTA+AGG + chr5_1:333159-333178 None:intergenic 25.0%
! TGTGTTAAAGAAAAATGAAC+AGG + chr5_1:333165-333184 None:intergenic 25.0%
! GTAATCAAAGAAAAAGAGAA+AGG + chr5_1:333519-333538 None:intergenic 25.0%
! AATTTAAATTTGCCAAACCA+AGG + chr5_1:333854-333873 None:intergenic 25.0%
!!! TTGGTTTGGCAAATTTAAAT+TGG - chr5_1:333853-333872 Msa0709200:intron 25.0%
! GTTAAGAATTAAGTTAGAGT+AGG - chr5_1:334033-334052 Msa0709200:intron 25.0%
! TTTATCAAACATGAATTGAG+AGG - chr5_1:334175-334194 Msa0709200:intron 25.0%
! AAAGATGAATTCAAAACAAG+TGG - chr5_1:334215-334234 Msa0709200:CDS 25.0%
! AAGATGAATTCAAAACAAGT+GGG - chr5_1:334216-334235 Msa0709200:CDS 25.0%
!!! TTATGTAAGAACTTGTTTTC+AGG - chr5_1:334304-334323 Msa0709200:CDS 25.0%
!!! ATTTTTTTACTGGCATTTGA+GGG - chr5_1:334414-334433 Msa0709200:CDS 25.0%
!!! GAAAGTATCTCATATTTGAT+TGG - chr5_1:334447-334466 Msa0709200:CDS 25.0%
! CAATAAGGTAATTAATAACC+AGG + chr5_1:334641-334660 None:intergenic 25.0%
! TTACCTTATTGAGTTTAACT+TGG - chr5_1:334650-334669 Msa0709200:intron 25.0%
! ATTGTACTGAAACAAAGAAA+GGG + chr5_1:334692-334711 None:intergenic 25.0%
!!! TTGAACACTGCTTTTTATTT+TGG - chr5_1:334912-334931 Msa0709200:intron 25.0%
! TAAGTAAGAAAGAAGCAAAA+AGG + chr5_1:334959-334978 None:intergenic 25.0%
!! CGATTTTCTGATTTTATAAC+AGG - chr5_1:335222-335241 Msa0709200:CDS 25.0%
!!! ACAGTAGATTTTTTTCTTTG+GGG + chr5_1:335638-335657 None:intergenic 25.0%
! TAACTGATGAATACTTTCAA+AGG - chr5_1:335657-335676 Msa0709200:intron 25.0%
!! ATTGAAAGTTGAATTTTCTG+TGG - chr5_1:335948-335967 Msa0709200:intron 25.0%
!! TTGAAAGTTGAATTTTCTGT+GGG - chr5_1:335949-335968 Msa0709200:intron 25.0%
! CCTCTATAATTGCTTTAATT+TGG + chr5_1:336098-336117 None:intergenic 25.0%
! CCAAATTAAAGCAATTATAG+AGG - chr5_1:336095-336114 Msa0709200:CDS 25.0%
!! TTTTCAGTAGTAAACTGAAT+TGG + chr5_1:336476-336495 None:intergenic 25.0%
! AAGTGAAAATGATTAACTAC+AGG + chr5_1:336636-336655 None:intergenic 25.0%
!!! AAACGATTTTAGTATAGAAC+AGG - chr5_1:336658-336677 Msa0709200:five_prime_UTR 25.0%
AAACCTAACTTCCAAAGTTT+GGG + chr5_1:331239-331258 None:intergenic 30.0%
GAATGAACTTTATTACGAAG+CGG - chr5_1:331497-331516 Msa0709200:three_prime_UTR 30.0%
AAAATCAATGAACATGGTGT+TGG + chr5_1:331550-331569 None:intergenic 30.0%
CTATCTCTGATGAATATTTG+AGG - chr5_1:331607-331626 Msa0709200:CDS 30.0%
!! TTTGTGTTGTTGTTGATGAT+AGG - chr5_1:331710-331729 Msa0709200:intron 30.0%
GACAATTGGAATGTTATAGA+AGG + chr5_1:331833-331852 None:intergenic 30.0%
ATAACATTCCAATTGTCAAG+AGG - chr5_1:331836-331855 Msa0709200:CDS 30.0%
TGAATATACCTCTTGACAAT+TGG + chr5_1:331847-331866 None:intergenic 30.0%
! TAATTTGCAAATTGAGGCTT+TGG - chr5_1:331917-331936 Msa0709200:intron 30.0%
!! TCTGTGTTCGATGTTTTTAT+AGG - chr5_1:331988-332007 Msa0709200:intron 30.0%
!! TTCGATGTTTTTATAGGCTA+AGG - chr5_1:331994-332013 Msa0709200:intron 30.0%
!! TCGATGTTTTTATAGGCTAA+GGG - chr5_1:331995-332014 Msa0709200:intron 30.0%
! TTTTTATAGGCTAAGGGAAT+TGG - chr5_1:332001-332020 Msa0709200:intron 30.0%
! AATCAGTAAATTTGCTCTCT+TGG + chr5_1:332351-332370 None:intergenic 30.0%
AAGAGAGCAAATTTACTGAT+TGG - chr5_1:332350-332369 Msa0709200:intron 30.0%
! CAAATTTACTGATTGGCAAA+GGG - chr5_1:332357-332376 Msa0709200:intron 30.0%
TGAAAAGTTAAAGCAGATTC+GGG + chr5_1:332505-332524 None:intergenic 30.0%
AATATTAGGGGGAAATAACA+GGG + chr5_1:333119-333138 None:intergenic 30.0%
AAATATTAGGGGGAAATAAC+AGG + chr5_1:333120-333139 None:intergenic 30.0%
! ATTTGACTGGTTGATTTAAC+AGG - chr5_1:333257-333276 Msa0709200:intron 30.0%
! TCTTGATGACCAAAAATAGT+TGG + chr5_1:333357-333376 None:intergenic 30.0%
GACATAAACGTTTGTATTGT+TGG - chr5_1:333453-333472 Msa0709200:intron 30.0%
TTCTTTGATTACTTTCATGC+TGG - chr5_1:333527-333546 Msa0709200:CDS 30.0%
TCATGTATGGTTATCATTTC+AGG - chr5_1:333569-333588 Msa0709200:CDS 30.0%
TTCATTTGTGTTTGTATCCT+TGG - chr5_1:333834-333853 Msa0709200:intron 30.0%
! AGTTGAATCTGGTTTAAACT+AGG + chr5_1:333895-333914 None:intergenic 30.0%
! AATAGGATTAGAGTTGCTTT+AGG - chr5_1:333954-333973 Msa0709200:intron 30.0%
! TTAGGTTTAAAATTACTGCC+TGG - chr5_1:333972-333991 Msa0709200:intron 30.0%
!!! TCATTGATTCACTATTTTCC+AGG + chr5_1:333993-334012 None:intergenic 30.0%
! ATTACAACTCGCAAACATTT+TGG + chr5_1:334108-334127 None:intergenic 30.0%
!! ACTTTATATCGGTTTCTGAA+TGG + chr5_1:334140-334159 None:intergenic 30.0%
TCAAGCACTTTATCATTATC+TGG - chr5_1:334250-334269 Msa0709200:CDS 30.0%
CATTGATGAATTTGACAAGA+TGG - chr5_1:334364-334383 Msa0709200:intron 30.0%
!!! CATTTTTTTACTGGCATTTG+AGG - chr5_1:334413-334432 Msa0709200:CDS 30.0%
CTCATATTTGATTGGATTGA+AGG - chr5_1:334455-334474 Msa0709200:CDS 30.0%
ACTATTAGTATCACAAAAGC+AGG - chr5_1:334507-334526 Msa0709200:CDS 30.0%
GAAAGGGCAAAAACTAAATT+AGG + chr5_1:334676-334695 None:intergenic 30.0%
CATTGTACTGAAACAAAGAA+AGG + chr5_1:334693-334712 None:intergenic 30.0%
! TTCTTTGTTTCAGTACAATG+TGG - chr5_1:334693-334712 Msa0709200:intron 30.0%
! TGGTTTAAGAGTTTTTGCAT+AGG + chr5_1:334887-334906 None:intergenic 30.0%
TGCAAAAACTCTTAAACCAA+AGG - chr5_1:334888-334907 Msa0709200:intron 30.0%
! CAGGTGTTTAATGATTTTAG+AGG - chr5_1:335153-335172 Msa0709200:CDS 30.0%
!! TGTTTAATGATTTTAGAGGC+TGG - chr5_1:335157-335176 Msa0709200:CDS 30.0%
! TTGTATATGTTTTCCTTAGC+TGG - chr5_1:335191-335210 Msa0709200:CDS 30.0%
TGCTGCAAACTTCTATAATA+AGG - chr5_1:335278-335297 Msa0709200:CDS 30.0%
GCAAACTTCTATAATAAGGT+AGG - chr5_1:335282-335301 Msa0709200:CDS 30.0%
TGAGTTTCAAGATCAAGATA+TGG - chr5_1:335415-335434 Msa0709200:intron 30.0%
AATGATAATAACGATGCTGA+TGG - chr5_1:335464-335483 Msa0709200:CDS 30.0%
!!! CAGTAGATTTTTTTCTTTGG+GGG + chr5_1:335637-335656 None:intergenic 30.0%
GTTAAAACCTTCTTGCATTA+CGG + chr5_1:335726-335745 None:intergenic 30.0%
CAACTTTCAATATGATCACA+TGG + chr5_1:335939-335958 None:intergenic 30.0%
GAAAAATAATTACAGTTCCG+TGG - chr5_1:336050-336069 Msa0709200:intron 30.0%
TGCTAGAAATGATAGAACTT+TGG - chr5_1:336293-336312 Msa0709200:CDS 30.0%
!! ACTGAAAAGTTTGATGATGT+TGG - chr5_1:336488-336507 Msa0709200:intron 30.0%
ATTTAAGAGTTGAACGATGT+CGG - chr5_1:336572-336591 Msa0709200:CDS 30.0%
AGAAACCATTTCCCAAACTT+TGG - chr5_1:331225-331244 Msa0709200:three_prime_UTR 35.0%
AACTTCCAAAGTTTGGGAAA+TGG + chr5_1:331233-331252 None:intergenic 35.0%
! TTTCCCAAACTTTGGAAGTT+AGG - chr5_1:331233-331252 Msa0709200:three_prime_UTR 35.0%
GAAACCTAACTTCCAAAGTT+TGG + chr5_1:331240-331259 None:intergenic 35.0%
TTCTGATGATAACCCTAACA+AGG - chr5_1:331795-331814 Msa0709200:intron 35.0%
CAACGTTGATATCCTTGTTA+GGG + chr5_1:331810-331829 None:intergenic 35.0%
! ACTTTCAAGTGTCTAGAATG+TGG - chr5_1:332107-332126 Msa0709200:intron 35.0%
ACAGCAATTCAAGTATACTG+AGG - chr5_1:332151-332170 Msa0709200:intron 35.0%
GTAGCATTTGGACAAATTGT+TGG + chr5_1:332295-332314 None:intergenic 35.0%
CTGTTGTTACATGTAGCATT+TGG + chr5_1:332307-332326 None:intergenic 35.0%
ATGTAACAACAGAGCAAAGT+GGG - chr5_1:332315-332334 Msa0709200:intron 35.0%
! GCAAATTTACTGATTGGCAA+AGG - chr5_1:332356-332375 Msa0709200:intron 35.0%
AGAATAACATCCAATGACCT+AGG + chr5_1:332427-332446 None:intergenic 35.0%
ATGAGATTGTAGAACATGCT+AGG - chr5_1:332452-332471 Msa0709200:CDS 35.0%
TGAGATTGTAGAACATGCTA+GGG - chr5_1:332453-332472 Msa0709200:CDS 35.0%
GAAAAGTTAAAGCAGATTCG+GGG + chr5_1:332504-332523 None:intergenic 35.0%
GTAAAAATCACCCTGCAAAT+TGG + chr5_1:332590-332609 None:intergenic 35.0%
! ATTTGCAGGGTGATTTTTAC+TGG - chr5_1:332590-332609 Msa0709200:intron 35.0%
AGTTGGCAATAAAAGCAAGT+CGG + chr5_1:332766-332785 None:intergenic 35.0%
! TTTTATTGCCAACTCTGTTC+AGG - chr5_1:332772-332791 Msa0709200:CDS 35.0%
GTAGAAGAGAAATAGACATC+AGG - chr5_1:332892-332911 Msa0709200:CDS 35.0%
AGACATCAGGAATAGAAAGA+AGG - chr5_1:332905-332924 Msa0709200:intron 35.0%
ATCTGCAATTCACTGTAAGT+TGG - chr5_1:332943-332962 Msa0709200:intron 35.0%
TGACCAACACTATATTTGAC+TGG - chr5_1:333244-333263 Msa0709200:intron 35.0%
CAACCAGTCAAATATAGTGT+TGG + chr5_1:333250-333269 None:intergenic 35.0%
TGGATGAAGTTCAAAGAATG+AGG - chr5_1:333289-333308 Msa0709200:intron 35.0%
! AGTGTAGCTCCAACTATTTT+TGG - chr5_1:333345-333364 Msa0709200:CDS 35.0%
ATCCTTCTTATGCTAATGAG+TGG - chr5_1:333390-333409 Msa0709200:CDS 35.0%
TCCTTCTTATGCTAATGAGT+GGG - chr5_1:333391-333410 Msa0709200:CDS 35.0%
GTTCACAAATCTACTCATGA+AGG - chr5_1:333414-333433 Msa0709200:CDS 35.0%
CGAATTGAATGGATCATGTA+TGG - chr5_1:333556-333575 Msa0709200:CDS 35.0%
ATACAAAACTCTCCAGTTTC+TGG + chr5_1:333682-333701 None:intergenic 35.0%
!! AACTGGAGAGTTTTGTATTG+AGG - chr5_1:333684-333703 Msa0709200:intron 35.0%
CTTCCACTAATACAAAAGAG+CGG + chr5_1:333721-333740 None:intergenic 35.0%
TTGTGTTTGTATCCTTGGTT+TGG - chr5_1:333839-333858 Msa0709200:intron 35.0%
ACAGTAGAACTAGTTGAATC+TGG + chr5_1:333906-333925 None:intergenic 35.0%
AATGCTTAGTTCAGAATCCA+TGG + chr5_1:334085-334104 None:intergenic 35.0%
AATTCATCTTTACCGAACTC+AGG + chr5_1:334206-334225 None:intergenic 35.0%
!!! AGAGGCATGCATTTTTTTAC+TGG - chr5_1:334404-334423 Msa0709200:intron 35.0%
ATTGAAGGTTGCAATTCATG+AGG - chr5_1:334470-334489 Msa0709200:CDS 35.0%
TGATAAGTCTAAACCACTGA+AGG - chr5_1:334596-334615 Msa0709200:CDS 35.0%
GAACATGTTATTACCTTCAG+TGG + chr5_1:334612-334631 None:intergenic 35.0%
AATAACATGTTCTGCTAACC+TGG - chr5_1:334620-334639 Msa0709200:intron 35.0%
AGGCCAAGTTAAACTCAATA+AGG + chr5_1:334656-334675 None:intergenic 35.0%
! TCAAACCTTGAAAGTATAGC+CGG + chr5_1:334727-334746 None:intergenic 35.0%
AAAAGCAGTGTTCAAACCTT+TGG + chr5_1:334907-334926 None:intergenic 35.0%
!!! TACTTTTTTTCCTTGCAGAG+TGG - chr5_1:335370-335389 Msa0709200:intron 35.0%
AGACGATTGCAAGGTAAAAT+GGG + chr5_1:335549-335568 None:intergenic 35.0%
TAGACGATTGCAAGGTAAAA+TGG + chr5_1:335550-335569 None:intergenic 35.0%
! TTTTACCTTGCAATCGTCTA+TGG - chr5_1:335550-335569 Msa0709200:CDS 35.0%
TTTACCTTGCAATCGTCTAT+GGG - chr5_1:335551-335570 Msa0709200:CDS 35.0%
ATACTTTCAAAGGATCACCA+AGG - chr5_1:335667-335686 Msa0709200:intron 35.0%
!! TTATTCAGGTTCTGAACATC+TGG - chr5_1:335838-335857 Msa0709200:CDS 35.0%
CAATATGATCACATGGAGTT+TGG + chr5_1:335932-335951 None:intergenic 35.0%
AGCAACGGGATTTGATTAAA+TGG - chr5_1:336007-336026 Msa0709200:intron 35.0%
AAATAATTACAGTTCCGTGG+AGG - chr5_1:336053-336072 Msa0709200:intron 35.0%
CATTTGATCGTGATAGATGA+TGG - chr5_1:336222-336241 Msa0709200:intron 35.0%
AAATGATAGAACTTTGGCTG+TGG - chr5_1:336299-336318 Msa0709200:CDS 35.0%
CAAACTCTTTCATCACTACT+AGG + chr5_1:336351-336370 None:intergenic 35.0%
CTAGTAGTGATGAAAGAGTT+TGG - chr5_1:336349-336368 Msa0709200:CDS 35.0%
! TTCAACCGATTCAGCGAAAA+TGG - chr5_1:331268-331287 Msa0709200:three_prime_UTR 40.0%
! TGCTTCCATTTTCGCTGAAT+CGG + chr5_1:331276-331295 None:intergenic 40.0%
!! TCAGCGAAAATGGAAGCATT+CGG - chr5_1:331278-331297 Msa0709200:three_prime_UTR 40.0%
!!! GAAAGCGTTTTCAACCCTAA+CGG + chr5_1:331327-331346 None:intergenic 40.0%
GCAACGTTGATATCCTTGTT+AGG + chr5_1:331811-331830 None:intergenic 40.0%
!!! GAGGCTTTGGAGTTTTGATT+AGG - chr5_1:331930-331949 Msa0709200:intron 40.0%
!!! GGAGTTTTGATTAGGTCTGT+CGG - chr5_1:331938-331957 Msa0709200:intron 40.0%
GAATTGGCTACATCAGAGAT+TGG - chr5_1:332017-332036 Msa0709200:intron 40.0%
CTAGACACTTGAAAGTTCCT+TGG + chr5_1:332103-332122 None:intergenic 40.0%
! TTCAAGTGTCTAGAATGTGG+TGG - chr5_1:332110-332129 Msa0709200:intron 40.0%
! TCAAGTGTCTAGAATGTGGT+GGG - chr5_1:332111-332130 Msa0709200:intron 40.0%
CATGTAACAACAGAGCAAAG+TGG - chr5_1:332314-332333 Msa0709200:intron 40.0%
CACAAACTGTCCAATTTGCA+GGG - chr5_1:332577-332596 Msa0709200:intron 40.0%
CATACCTGATATATTGGCGT+TGG - chr5_1:332625-332644 Msa0709200:CDS 40.0%
AGAGAGATCAGAATGTCGTA+GGG - chr5_1:332658-332677 Msa0709200:intron 40.0%
ATAACGAACCTGAACAGAGT+TGG + chr5_1:332783-332802 None:intergenic 40.0%
! GGTTTGTTCCAGATTTGTGA+TGG - chr5_1:332870-332889 Msa0709200:CDS 40.0%
CTCTTCTACCATCACAAATC+TGG + chr5_1:332881-332900 None:intergenic 40.0%
TATATGCAACACCAGTCAGT+TGG + chr5_1:333034-333053 None:intergenic 40.0%
GCACACATACATGATGTTCT+CGG - chr5_1:333193-333212 Msa0709200:intron 40.0%
! ACAAGCTTGGTGAAGAAATC+TGG + chr5_1:333321-333340 None:intergenic 40.0%
AGCTACACTTTCAACAAGCT+TGG + chr5_1:333334-333353 None:intergenic 40.0%
CCTTCTTATGCTAATGAGTG+GGG - chr5_1:333392-333411 Msa0709200:CDS 40.0%
AAACGTTTATGTCCCCTCTA+AGG + chr5_1:333446-333465 None:intergenic 40.0%
AATTGAGACTTTGCACAGCT+AGG + chr5_1:333483-333502 None:intergenic 40.0%
CCAGATGTATACACAGATCT+TGG + chr5_1:333613-333632 None:intergenic 40.0%
CCAAGATCTGTGTATACATC+TGG - chr5_1:333610-333629 Msa0709200:intron 40.0%
ATAAGTTTGTCTGTCCACCA+TGG - chr5_1:334065-334084 Msa0709200:intron 40.0%
!! GTAAGAACTTGTTTTCAGGC+CGG - chr5_1:334308-334327 Msa0709200:intron 40.0%
CAAGATGGACATAAGAGATC+AGG - chr5_1:334379-334398 Msa0709200:intron 40.0%
GACATAAGAGATCAGGTAAG+AGG - chr5_1:334386-334405 Msa0709200:intron 40.0%
GGTAATCTGTAACATCGTCT+GGG + chr5_1:334774-334793 None:intergenic 40.0%
TGGTAATCTGTAACATCGTC+TGG + chr5_1:334775-334794 None:intergenic 40.0%
GCACAATATGAGAAGCTATG+TGG + chr5_1:334795-334814 None:intergenic 40.0%
TGACGTTAGCTGCATTAATC+AGG + chr5_1:334983-335002 None:intergenic 40.0%
GTCAGATGCAAGAAAACTAC+TGG - chr5_1:334999-335018 Msa0709200:CDS 40.0%
CAGGATTTGTATCAGCTCTA+CGG + chr5_1:335044-335063 None:intergenic 40.0%
TGATACAAATCCTGGCAGTA+GGG - chr5_1:335050-335069 Msa0709200:intron 40.0%
TTGCATATCGGATGACAGTT+AGG - chr5_1:335073-335092 Msa0709200:intron 40.0%
! AAGGTGTCATCTGGATAATC+AGG - chr5_1:335134-335153 Msa0709200:CDS 40.0%
AATCGTCTTTAGACCAGCTA+AGG + chr5_1:335207-335226 None:intergenic 40.0%
!!! CTATTTTGGGAGCTAGCTTT+TGG - chr5_1:335332-335351 Msa0709200:intron 40.0%
GATTGCAAGGTAAAATGGGT+AGG + chr5_1:335545-335564 None:intergenic 40.0%
TTATCCCATAGACGATTGCA+AGG + chr5_1:335558-335577 None:intergenic 40.0%
TCTGTGGGTTTATCTATTGC+AGG - chr5_1:335964-335983 Msa0709200:intron 40.0%
GGTTTATCTATTGCAGGAAG+TGG - chr5_1:335970-335989 Msa0709200:intron 40.0%
AAGTTGCTGCAATATTGGGA+CGG + chr5_1:336391-336410 None:intergenic 40.0%
CACCAAGTTGCTGCAATATT+GGG + chr5_1:336395-336414 None:intergenic 40.0%
!!! CAAGCTTTTCTTGGTAATGC+TGG - chr5_1:336435-336454 Msa0709200:intron 40.0%
!! TCTTGGTAATGCTGGAAAAC+TGG - chr5_1:336443-336462 Msa0709200:intron 40.0%
!! GGAAGCATTCGGTGGTTATT+TGG - chr5_1:331289-331308 Msa0709200:three_prime_UTR 45.0%
!! TGGTTGATGAGAAAGCCGTT+AGG - chr5_1:331309-331328 Msa0709200:three_prime_UTR 45.0%
!! GGTTGATGAGAAAGCCGTTA+GGG - chr5_1:331310-331329 Msa0709200:three_prime_UTR 45.0%
TGGATCACCAGTTTCAGATC+TGG - chr5_1:331468-331487 Msa0709200:three_prime_UTR 45.0%
! CCTTTGTCCAGATCTGAAAC+TGG + chr5_1:331478-331497 None:intergenic 45.0%
CCAGTTTCAGATCTGGACAA+AGG - chr5_1:331475-331494 Msa0709200:three_prime_UTR 45.0%
TTGCAGGCATTCTGCAAGTA+AGG + chr5_1:331742-331761 None:intergenic 45.0%
!! TGCCTGCAAGAGGTTTGTTA+TGG - chr5_1:331753-331772 Msa0709200:intron 45.0%
CTCCATAACAAACCTCTTGC+AGG + chr5_1:331758-331777 None:intergenic 45.0%
TGGCTACATCAGAGATTGGT+AGG - chr5_1:332021-332040 Msa0709200:intron 45.0%
GGTAGGCTTGTATCTGTAAC+AGG - chr5_1:332038-332057 Msa0709200:intron 45.0%
GCTTGTATCTGTAACAGGAG+TGG - chr5_1:332043-332062 Msa0709200:intron 45.0%
AAAGTTCCTTGGAGAAGCTC+AGG + chr5_1:332092-332111 None:intergenic 45.0%
! CAAGTGTCTAGAATGTGGTG+GGG - chr5_1:332112-332131 Msa0709200:intron 45.0%
ATTGTAGAACATGCTAGGGC+TGG - chr5_1:332457-332476 Msa0709200:CDS 45.0%
CCTGCAAATTGGACAGTTTG+TGG + chr5_1:332579-332598 None:intergenic 45.0%
CCACAAACTGTCCAATTTGC+AGG - chr5_1:332576-332595 Msa0709200:intron 45.0%
GAAGCCAACGCCAATATATC+AGG + chr5_1:332632-332651 None:intergenic 45.0%
ACATTCTGATCTCTCTCCAG+GGG + chr5_1:332654-332673 None:intergenic 45.0%
GACATTCTGATCTCTCTCCA+GGG + chr5_1:332655-332674 None:intergenic 45.0%
GAGAGAGATCAGAATGTCGT+AGG - chr5_1:332657-332676 Msa0709200:intron 45.0%
! ATCTGGGAATGAAGGTGTGA+GGG - chr5_1:332706-332725 Msa0709200:intron 45.0%
TAAAAGCAAGTCGGTAGGAG+AGG + chr5_1:332757-332776 None:intergenic 45.0%
GGCAATAAAAGCAAGTCGGT+AGG + chr5_1:332762-332781 None:intergenic 45.0%
TTAGGGGGAAATAACAGGGA+TGG + chr5_1:333115-333134 None:intergenic 45.0%
! CTGGTTGATTTAACAGGCTC+AGG - chr5_1:333263-333282 Msa0709200:intron 45.0%
GATTTAACAGGCTCAGGAAC+TGG - chr5_1:333269-333288 Msa0709200:intron 45.0%
CCCCACTCATTAGCATAAGA+AGG + chr5_1:333395-333414 None:intergenic 45.0%
!! ATGAAGGCATCAGCCTTAGA+GGG - chr5_1:333430-333449 Msa0709200:intron 45.0%
!! GCTGGTTTGTGCGAATTGAA+TGG - chr5_1:333545-333564 Msa0709200:CDS 45.0%
GAAAGTCATCATCTGCTGCT+GGG - chr5_1:333632-333651 Msa0709200:intron 45.0%
! CTGCCGCTCTTTTGTATTAG+TGG - chr5_1:333715-333734 Msa0709200:intron 45.0%
CAGCTCTATAGAACTAGCGT+AGG - chr5_1:333766-333785 Msa0709200:intron 45.0%
GCTTAGTTCAGAATCCATGG+TGG + chr5_1:334082-334101 None:intergenic 45.0%
!! TGAGAGGTATTGCCTGAGTT+CGG - chr5_1:334191-334210 Msa0709200:intron 45.0%
! GCTTTGATGCTTGCTGACAA+TGG - chr5_1:334332-334351 Msa0709200:intron 45.0%
TTACTGGCATTTGAGGGTCA+TGG - chr5_1:334420-334439 Msa0709200:CDS 45.0%
GGTTGCAATTCATGAGGCTA+TGG - chr5_1:334476-334495 Msa0709200:CDS 45.0%
! TTCCACCGGCTATACTTTCA+AGG - chr5_1:334719-334738 Msa0709200:intron 45.0%
! AACCTTGAAAGTATAGCCGG+TGG + chr5_1:334724-334743 None:intergenic 45.0%
AGTTCTGCTGTAGTGAACGT+TGG + chr5_1:334850-334869 None:intergenic 45.0%
CGTAGAGCTGATACAAATCC+TGG - chr5_1:335042-335061 Msa0709200:intron 45.0%
CTGATACAAATCCTGGCAGT+AGG - chr5_1:335049-335068 Msa0709200:intron 45.0%
! GGCAGTTGGAAGCTTTAATC+AGG - chr5_1:335094-335113 Msa0709200:intron 45.0%
! GGAAGCTTTAATCAGGCTGT+CGG - chr5_1:335101-335120 Msa0709200:intron 45.0%
ATCCAGATGACACCTTGCAA+TGG + chr5_1:335130-335149 None:intergenic 45.0%
ACTGCTAAACGAACATGACG+AGG + chr5_1:335253-335272 None:intergenic 45.0%
CAAGATATGGACGAAGAAGC+AGG - chr5_1:335428-335447 Msa0709200:intron 45.0%
! TCTTTGGGGGTTAGATCCAT+CGG + chr5_1:335624-335643 None:intergenic 45.0%
! CTGTCTAAGACGCATGACAA+GGG + chr5_1:335693-335712 None:intergenic 45.0%
ACATCTGGATACCCTTTGTC+TGG - chr5_1:335853-335872 Msa0709200:CDS 45.0%
TAATTACAGTTCCGTGGAGG+AGG - chr5_1:336056-336075 Msa0709200:intron 45.0%
! TGATCGTGATAGATGATGGC+AGG - chr5_1:336226-336245 Msa0709200:intron 45.0%
GTCCCAATATTGCAGCAACT+TGG - chr5_1:336390-336409 Msa0709200:CDS 45.0%
CCACCAAGTTGCTGCAATAT+TGG + chr5_1:336396-336415 None:intergenic 45.0%
CCAATATTGCAGCAACTTGG+TGG - chr5_1:336393-336412 Msa0709200:CDS 45.0%
! CTTGAGCTGCAAGCTTTTCT+TGG - chr5_1:336426-336445 Msa0709200:intron 45.0%
!!! TATGAATAATATAAAATTTT+TGG - chr5_1:333061-333080 Msa0709200:CDS 5.0%
!! GCGAAAATGGAAGCATTCGG+TGG - chr5_1:331281-331300 Msa0709200:three_prime_UTR 50.0%
ACTTGCAGAATGCCTGCAAG+AGG - chr5_1:331743-331762 Msa0709200:intron 50.0%
TGATTAGGTCTGTCGGTGTG+AGG - chr5_1:331945-331964 Msa0709200:intron 50.0%
GATTAGGTCTGTCGGTGTGA+GGG - chr5_1:331946-331965 Msa0709200:intron 50.0%
CTGTAACAGGAGTGGTGACA+AGG - chr5_1:332051-332070 Msa0709200:intron 50.0%
AGTGGTGACAAGGACAAGTG+AGG - chr5_1:332061-332080 Msa0709200:intron 50.0%
TTGGCAAAGGGTCAGAATGC+AGG - chr5_1:332369-332388 Msa0709200:intron 50.0%
ACGTCCAATGAGATACCTGC+TGG - chr5_1:332394-332413 Msa0709200:CDS 50.0%
AGAGCCAGCAGGTATCTCAT+TGG + chr5_1:332401-332420 None:intergenic 50.0%
CGACATTCTGATCTCTCTCC+AGG + chr5_1:332656-332675 None:intergenic 50.0%
TAGGGAAGCTTCTCAACGCA+AGG - chr5_1:332676-332695 Msa0709200:intron 50.0%
AGGGAAGCTTCTCAACGCAA+GGG - chr5_1:332677-332696 Msa0709200:intron 50.0%
!! AACGCAAGGGTGCTTCATCT+GGG - chr5_1:332690-332709 Msa0709200:intron 50.0%
GGTGCTTCATCTGGGAATGA+AGG - chr5_1:332698-332717 Msa0709200:intron 50.0%
! CATCTGGGAATGAAGGTGTG+AGG - chr5_1:332705-332724 Msa0709200:intron 50.0%
! TCTGGGAATGAAGGTGTGAG+GGG - chr5_1:332707-332726 Msa0709200:intron 50.0%
AGCTGTCATGACCAACTGAC+TGG - chr5_1:333020-333039 Msa0709200:CDS 50.0%
!! CATGAAGGCATCAGCCTTAG+AGG - chr5_1:333429-333448 Msa0709200:intron 50.0%
!! TGAAGGCATCAGCCTTAGAG+GGG - chr5_1:333431-333450 Msa0709200:intron 50.0%
GGAAAGTCATCATCTGCTGC+TGG - chr5_1:333631-333650 Msa0709200:intron 50.0%
GTTGACTGCAACTGTTGCCA+AGG - chr5_1:333654-333673 Msa0709200:intron 50.0%
GTTGCCAAGGAACCAGAAAC+TGG - chr5_1:333667-333686 Msa0709200:intron 50.0%
!! CTCTCCAGTTTCTGGTTCCT+TGG + chr5_1:333674-333693 None:intergenic 50.0%
TATCATACCGTCCTCCAGCA+GGG + chr5_1:334581-334600 None:intergenic 50.0%
TTATCATACCGTCCTCCAGC+AGG + chr5_1:334582-334601 None:intergenic 50.0%
GTACAATGTGGCTCTTCCAC+CGG - chr5_1:334705-334724 Msa0709200:intron 50.0%
CTGGCAGTAGGGTTGCATAT+CGG - chr5_1:335061-335080 Msa0709200:intron 50.0%
TCGGATGACAGTTAGGCAGT+TGG - chr5_1:335080-335099 Msa0709200:intron 50.0%
! AGCTTTAATCAGGCTGTCGG+AGG - chr5_1:335104-335123 Msa0709200:intron 50.0%
TCACTTGACTCCACTCTGCA+AGG + chr5_1:335383-335402 None:intergenic 50.0%
GAAGAAGCAGGTAGTGACGA+TGG - chr5_1:335440-335459 Msa0709200:CDS 50.0%
AACGATGCTGATGGTCAAGC+TGG - chr5_1:335473-335492 Msa0709200:CDS 50.0%
AGCTGGAAACTCTACTGCTC+AGG - chr5_1:335490-335509 Msa0709200:CDS 50.0%
CTTGCAGAAAAACCAGCCGA+TGG - chr5_1:335605-335624 Msa0709200:CDS 50.0%
! GCTGTCTAAGACGCATGACA+AGG + chr5_1:335694-335713 None:intergenic 50.0%
GAGGAGACCGTAATGCAAGA+AGG - chr5_1:335716-335735 Msa0709200:intron 50.0%
! TCAAAGGTGCGCCAGACAAA+GGG + chr5_1:335867-335886 None:intergenic 50.0%
ATTGCAGGAAGTGGCTTAGC+TGG - chr5_1:335979-335998 Msa0709200:intron 50.0%
TTGCAGGAAGTGGCTTAGCT+GGG - chr5_1:335980-335999 Msa0709200:intron 50.0%
GCTTAGCTGGGATGAAGCAA+CGG - chr5_1:335992-336011 Msa0709200:intron 50.0%
CTTAGCTGGGATGAAGCAAC+GGG - chr5_1:335993-336012 Msa0709200:intron 50.0%
TTCAACTTTCGCCTCCTCCA+CGG + chr5_1:336070-336089 None:intergenic 50.0%
AAGCTTGCAGCTCAAGACAC+AGG + chr5_1:336422-336441 None:intergenic 50.0%
GTTCGACCTGAGCTTCTCCA+AGG - chr5_1:332083-332102 Msa0709200:intron 55.0%
TGGCTCTCTGCCTAGGTCAT+TGG - chr5_1:332414-332433 Msa0709200:CDS 55.0%
!! ATATTGGCGTTGGCTTCCCC+TGG - chr5_1:332635-332654 Msa0709200:CDS 55.0%
!! CAACGCAAGGGTGCTTCATC+TGG - chr5_1:332689-332708 Msa0709200:intron 55.0%
! ATGAAGGTGTGAGGGGCCTT+AGG - chr5_1:332714-332733 Msa0709200:intron 55.0%
! TGAAGGTGTGAGGGGCCTTA+GGG - chr5_1:332715-332734 Msa0709200:intron 55.0%
CTCTGACTCCCAAAGCCCTA+AGG + chr5_1:332733-332752 None:intergenic 55.0%
GTCAGCAAGCATCAAAGCGC+CGG + chr5_1:334330-334349 None:intergenic 55.0%
GGCATTTGAGGGTCATGGAC+TGG - chr5_1:334425-334444 Msa0709200:CDS 55.0%
CGATATGCAACCCTACTGCC+AGG + chr5_1:335063-335082 None:intergenic 55.0%
! GGCCATTGCAAGGTGTCATC+TGG - chr5_1:335125-335144 Msa0709200:CDS 55.0%
!! CACCTCACCATTGGTTCCAG+CGG + chr5_1:335519-335538 None:intergenic 55.0%
GGTAGGAGACACCTCACCAT+TGG + chr5_1:335528-335547 None:intergenic 55.0%
AAGACGCATGACAAGGGCCT+TGG + chr5_1:335687-335706 None:intergenic 55.0%
CATGCGTCTTAGACAGCACG+AGG - chr5_1:335697-335716 Msa0709200:intron 55.0%
! CTCAAAGGTGCGCCAGACAA+AGG + chr5_1:335868-335887 None:intergenic 55.0%
CAAGCAGCATCAGAAGCTGC+TGG - chr5_1:336249-336268 Msa0709200:intron 55.0%
ATTGGGACGGCGAAACAACG+TGG + chr5_1:336378-336397 None:intergenic 55.0%
!! TACCTGCTGGCTCTCTGCCT+AGG - chr5_1:332407-332426 Msa0709200:CDS 60.0%
TGTGAGGGGCCTTAGGGCTT+TGG - chr5_1:332721-332740 Msa0709200:intron 60.0%
GTGAGGGGCCTTAGGGCTTT+GGG - chr5_1:332722-332741 Msa0709200:intron 60.0%
! AGGGTTGGCAGCGGCAAGAA+TGG + chr5_1:334562-334581 None:intergenic 60.0%
ATACCGTCCTCCAGCAGGGT+TGG + chr5_1:334577-334596 None:intergenic 60.0%
TCTACTGCTCAGGAAGCCGC+TGG - chr5_1:335500-335519 Msa0709200:CDS 60.0%
CAGGAAGCCGCTGGAACCAA+TGG - chr5_1:335509-335528 Msa0709200:CDS 60.0%
AGCCGCTGGAACCAATGGTG+AGG - chr5_1:335514-335533 Msa0709200:CDS 60.0%
TGGGGGTTAGATCCATCGGC+TGG + chr5_1:335620-335639 None:intergenic 60.0%
GACCTAGGCAGAGAGCCAGC+AGG + chr5_1:332412-332431 None:intergenic 65.0%
! TCCTCCAGCAGGGTTGGCAG+CGG + chr5_1:334571-334590 None:intergenic 65.0%
CTGCCAACCCTGCTGGAGGA+CGG - chr5_1:334571-334590 Msa0709200:CDS 65.0%
GGCTGTCGGAGGCCATTGCA+AGG - chr5_1:335115-335134 Msa0709200:intron 65.0%
CTTGCCGCTGCCAACCCTGC+TGG - chr5_1:334564-334583 Msa0709200:CDS 70.0%
GCCGCTGCCAACCCTGCTGG+AGG - chr5_1:334567-334586 Msa0709200:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 331203 336714 331203 ID=Msa0709200;Name=Msa0709200
chr5_1 mRNA 331203 336714 331203 ID=Msa0709200-mRNA-1;Parent=Msa0709200;Name=Msa0709200-mRNA-1;_AED=0.10;_eAED=0.10;_QI=84|1|1|1|1|1|18|370|835
chr5_1 exon 331203 331716 331203 ID=Msa0709200-mRNA-1:exon:118;Parent=Msa0709200-mRNA-1
chr5_1 exon 331801 331931 331801 ID=Msa0709200-mRNA-1:exon:117;Parent=Msa0709200-mRNA-1
chr5_1 exon 332180 332305 332180 ID=Msa0709200-mRNA-1:exon:116;Parent=Msa0709200-mRNA-1
chr5_1 exon 332387 332529 332387 ID=Msa0709200-mRNA-1:exon:115;Parent=Msa0709200-mRNA-1
chr5_1 exon 332618 332673 332618 ID=Msa0709200-mRNA-1:exon:114;Parent=Msa0709200-mRNA-1
chr5_1 exon 332762 332923 332762 ID=Msa0709200-mRNA-1:exon:113;Parent=Msa0709200-mRNA-1
chr5_1 exon 333008 333211 333008 ID=Msa0709200-mRNA-1:exon:112;Parent=Msa0709200-mRNA-1
chr5_1 exon 333300 333440 333300 ID=Msa0709200-mRNA-1:exon:111;Parent=Msa0709200-mRNA-1
chr5_1 exon 333517 333591 333517 ID=Msa0709200-mRNA-1:exon:110;Parent=Msa0709200-mRNA-1
chr5_1 exon 334212 334326 334212 ID=Msa0709200-mRNA-1:exon:109;Parent=Msa0709200-mRNA-1
chr5_1 exon 334409 334638 334409 ID=Msa0709200-mRNA-1:exon:108;Parent=Msa0709200-mRNA-1
chr5_1 exon 334961 335035 334961 ID=Msa0709200-mRNA-1:exon:107;Parent=Msa0709200-mRNA-1
chr5_1 exon 335124 335319 335124 ID=Msa0709200-mRNA-1:exon:106;Parent=Msa0709200-mRNA-1
chr5_1 exon 335432 335625 335432 ID=Msa0709200-mRNA-1:exon:105;Parent=Msa0709200-mRNA-1
chr5_1 exon 335745 335907 335745 ID=Msa0709200-mRNA-1:exon:104;Parent=Msa0709200-mRNA-1
chr5_1 exon 336060 336185 336060 ID=Msa0709200-mRNA-1:exon:103;Parent=Msa0709200-mRNA-1
chr5_1 exon 336289 336438 336289 ID=Msa0709200-mRNA-1:exon:102;Parent=Msa0709200-mRNA-1
chr5_1 exon 336554 336714 336554 ID=Msa0709200-mRNA-1:exon:101;Parent=Msa0709200-mRNA-1
chr5_1 five_prime_UTR 336631 336714 336631 ID=Msa0709200-mRNA-1:five_prime_utr;Parent=Msa0709200-mRNA-1
chr5_1 CDS 336554 336630 336554 ID=Msa0709200-mRNA-1:cds;Parent=Msa0709200-mRNA-1
chr5_1 CDS 336289 336438 336289 ID=Msa0709200-mRNA-1:cds;Parent=Msa0709200-mRNA-1
chr5_1 CDS 336060 336185 336060 ID=Msa0709200-mRNA-1:cds;Parent=Msa0709200-mRNA-1
chr5_1 CDS 335745 335907 335745 ID=Msa0709200-mRNA-1:cds;Parent=Msa0709200-mRNA-1
chr5_1 CDS 335432 335625 335432 ID=Msa0709200-mRNA-1:cds;Parent=Msa0709200-mRNA-1
chr5_1 CDS 335124 335319 335124 ID=Msa0709200-mRNA-1:cds;Parent=Msa0709200-mRNA-1
chr5_1 CDS 334961 335035 334961 ID=Msa0709200-mRNA-1:cds;Parent=Msa0709200-mRNA-1
chr5_1 CDS 334409 334638 334409 ID=Msa0709200-mRNA-1:cds;Parent=Msa0709200-mRNA-1
chr5_1 CDS 334212 334326 334212 ID=Msa0709200-mRNA-1:cds;Parent=Msa0709200-mRNA-1
chr5_1 CDS 333517 333591 333517 ID=Msa0709200-mRNA-1:cds;Parent=Msa0709200-mRNA-1
chr5_1 CDS 333300 333440 333300 ID=Msa0709200-mRNA-1:cds;Parent=Msa0709200-mRNA-1
chr5_1 CDS 333008 333211 333008 ID=Msa0709200-mRNA-1:cds;Parent=Msa0709200-mRNA-1
chr5_1 CDS 332762 332923 332762 ID=Msa0709200-mRNA-1:cds;Parent=Msa0709200-mRNA-1
chr5_1 CDS 332618 332673 332618 ID=Msa0709200-mRNA-1:cds;Parent=Msa0709200-mRNA-1
chr5_1 CDS 332387 332529 332387 ID=Msa0709200-mRNA-1:cds;Parent=Msa0709200-mRNA-1
chr5_1 CDS 332180 332305 332180 ID=Msa0709200-mRNA-1:cds;Parent=Msa0709200-mRNA-1
chr5_1 CDS 331801 331931 331801 ID=Msa0709200-mRNA-1:cds;Parent=Msa0709200-mRNA-1
chr5_1 CDS 331573 331716 331573 ID=Msa0709200-mRNA-1:cds;Parent=Msa0709200-mRNA-1
chr5_1 three_prime_UTR 331203 331572 331203 ID=Msa0709200-mRNA-1:three_prime_utr;Parent=Msa0709200-mRNA-1
Gene Sequence

>Msa0709200

ATGGAAGCATTCGGTGGTTATTTGGTTGATGAGAAAGCCGTTAGGGTTGAAAACGCTTTCTTAGATTTTCTCAAAAGTTTCAGATCTGGACAAAGGAATGAACTTTATTACGAAGCGGAGATTGAAGTCATGAGAGCTAACGAATCCAACACCATGTTCATTGATTTTGAACATGTGATTAGATTCAGTGATGTTCTTCAGAAAGCTATCTCTGATGAATATTTGAGGTTCGAACCTTACTTGCAGAATGCCTGCAAGAGGTTTGTTATGGAGCTTAAGCCGACATTCATTTCTGATGATAACCCTAACAAGGATATCAACGTTGCCTTCTATAACATTCCAATTGTCAAGAGGCTAAGGGAATTGGCTACATCAGAGATTGGTAGGCTTGTATCTGTAACAGGAGTGGTGACAAGGACAAGTGAGGTTCGACCTGAGCTTCTCCAAGGAACTTTCAAGTGTCTAGAATGTGGTGGGGTTATAAAGAATGTTGAACAGCAATTCAAGTATACTGAGCCAACAATTTGTCCAAATGCTACATGTAACAACAGAGCAAAGTGGGCACTGCTTCGCCAAGAGAGCAAATTTACTGATTGGCAAAGGGTCAGAATGCAGGAGACGTCCAATGAGATACCTGCTGGCTCTCTGCCTAGGTCATTGGATGTTATTCTTCGTCATGAGATTGTAGAACATGCTAGGGCTGGTGACACGGTGATTTTTACTGGAACTGTAATTGTCATACCTGATATATTGGCGTTGGCTTCCCCTGGAGAGAGATCAGAATGTCGTAGGGAAGCTTCTCAACGCAAGGGTGCTTCATCTGGGAATGAAGGTGTGAGGGGCCTTAGGGCTTTGGGAGTCAGAGACCTCTCCTACCGACTTGCTTTTATTGCCAACTCTGTTCAGATTTGTGATGGTAGAAGAGAAATAGACATCAGGAATAGAAAGAAGGATTCAGATGAAGATGATCTGCAATTCACTGCTCAGGAACTGGATGAAGTTCAAAGAATGAGGAACACTCCAGATTTCTTCACCAAGCTTGTTGAAAGTGTAGCTCCAACTATTTTTGGTCATCAAGATATTAAGCGAGCAATCCTTCTTATGCTAATGAGTGGGGTTCACAAATCTACTCATGAAGGCATCAGCCTTAGAGGGGACATAAACGTTTGTATTGTTGGAGATCCTAGCTGTGCAAAGTCTCAATTTCTTAAGTATACTTCAAGCATTGTTCCAAGATCTGTGTATACATCTGGAAAGTCATCATCTGCTGCTGGGTTGACTGCAACTGTTGCCAAGGAACCAGAAACTGGAGAGTTTTGTATTGAGGCCGGCGCTTTGATGCTTGCTGACAATGGCATTTGCTGCATTGATGAATTTGACAAGATGGACATAAGAGATCAGGTTGCAATTCATGAGGCTATGGAACAACAAACTATTAGTATCACAAAAGCAGGAATACAAGCAACACTCAATGCTCGTACTTCCATTCTTGCCGCTGCCAACCCTGCTGGAGGACGGTATGATAAGTCTAAACCACTGAAGTACAATGTGGCTCTTCCACCGGCTATACTTTCAAGGTTTGATCTTGTATACATTATGATTGATGACCCAGACGATGTTACAGATTACCACATAGCTTCTCATATTGTGCGAGTTCATCAAAAGCGCGAAGAAGCTCTTGCTCCAACGTTCACTACAGCAGAACTGAAGCGTTATATAGCCTATGCAAAAACTCTTAAACCAAAGCTAACGTCAGATGCAAGAAAACTACTGGTAGACTCTTATGTTTCTCTCCGTAGAGCTGATACAAATCCTGGCAGTAGGGTTGCATATCGGATGACAGTTAGGCAGTTGGAAGCTTTAATCAGGCTGTCGGAGGCCATTGCAAGGTGTCATCTGGATAATCAGGTACAACCTCGTCATGTTCGTTTAGCAGTAAAACTGCTGCAAACTTCTATAATAAGAGTGGAGTCAAGTGAGATCGATTTATCTGAGTTTCAAGATCAAGATATGGACGAAGAAGCAGGTAGTGACGATGGAAATGATAATAACGATGCTGATGGTCAAGCTGGAAACTCTACTGCTCAGGAAGCCGCTGGAACCAATGAAAAACCAGCCGATGGATCTAACCCCCAAAGAAAAAAATCTACTGTAACTGATGAATACTTTCAAAGGATCACCAAGGCCCTTGTCATGCGTCTTAGACAGCACGAGGAGACCGTAATGCAAGAAGGAAGTGGCTTAGCTGGGATGAAGCAACGGGATTTGATTAAATGGTATGTAGACCAGCAAAATGAGAAAAATAATTACAGTTCCGTGGAGGAGGCGAAAGTTGAAATTTCCCAAATTAAAGCAATTATAGAGATTTTAATTCGAAGAGAGGGGCATTTGATCGTGATAGATGATGGCAGGCAAGCAGCATCAGAAGCTGCTGGTGCAGAACAATCAGAGTCTGCTGCTAGAAATGATAGAACTTTGGCTGTGGCTCCTAATTATGTTGTTGATTAG
Protein sequence

>Msa0709200

MEAFGGYLVDEKAVRVENAFLDFLKSFRSGQRNELYYEAEIEVMRANESNTMFIDFEHVIRFSDVLQKAISDEYLRFEPYLQNACKRFVMELKPTFISDDNPNKDINVAFYNIPIVKRLRELATSEIGRLVSVTGVVTRTSEVRPELLQGTFKCLECGGVIKNVEQQFKYTEPTICPNATCNNRAKWALLRQESKFTDWQRVRMQETSNEIPAGSLPRSLDVILRHEIVEHARAGDTVIFTGTVIVIPDILALASPGERSECRREASQRKGASSGNEGVRGLRALGVRDLSYRLAFIANSVQICDGRREIDIRNRKKDSDEDDLQFTAQELDEVQRMRNTPDFFTKLVESVAPTIFGHQDIKRAILLMLMSGVHKSTHEGISLRGDINVCIVGDPSCAKSQFLKYTSSIVPRSVYTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGICCIDEFDKMDIRDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPAGGRYDKSKPLKYNVALPPAILSRFDLVYIMIDDPDDVTDYHIASHIVRVHQKREEALAPTFTTAELKRYIAYAKTLKPKLTSDARKLLVDSYVSLRRADTNPGSRVAYRMTVRQLEALIRLSEAIARCHLDNQVQPRHVRLAVKLLQTSIIRVESSEIDLSEFQDQDMDEEAGSDDGNDNNDADGQAGNSTAQEAAGTNEKPADGSNPQRKKSTVTDEYFQRITKALVMRLRQHEETVMQEGSGLAGMKQRDLIKWYVDQQNEKNNYSSVEEAKVEISQIKAIIEILIRREGHLIVIDDGRQAASEAAGAEQSESAARNDRTLAVAPNYVVD*