AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0837460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0837460 MtrunA17_Chr5g0403921 95.709 769 14 1 1 769 1 750 0.0 1507
Msa0837460 MtrunA17_Chr4g0066741 47.667 493 229 7 177 665 181 648 2.67e-150 466
Msa0837460 MtrunA17_Chr2g0286291 42.122 622 292 11 50 665 92 651 1.00e-148 462
Msa0837460 MtrunA17_Chr5g0394201 44.578 498 243 8 178 665 357 831 7.66e-136 428
Msa0837460 MtrunA17_Chr1g0205891 43.574 498 249 8 178 665 370 845 2.50e-131 417
Msa0837460 MtrunA17_Chr4g0066651 43.320 494 255 8 178 660 983 1462 1.31e-124 412
Msa0837460 MtrunA17_Chr3g0095091 40.320 563 288 14 179 723 566 1098 9.72e-116 384
Msa0837460 MtrunA17_Chr5g0442141 42.974 491 250 8 179 657 612 1084 9.20e-115 382
Msa0837460 MtrunA17_Chr3g0137091 37.336 608 319 12 152 738 256 822 1.60e-107 358
Msa0837460 MtrunA17_Chr7g0232121 36.411 574 318 15 184 729 39 593 6.91e-100 328
Msa0837460 MtrunA17_Chr8g0348721 41.505 465 246 9 178 627 981 1434 2.75e-98 335
Msa0837460 MtrunA17_Chr4g0052341 40.040 502 261 11 179 663 740 1218 9.43e-96 327
Msa0837460 MtrunA17_Chr7g0248031 39.440 464 258 8 178 627 988 1442 2.98e-92 317
Msa0837460 MtrunA17_Chr1g0163011 34.310 580 268 18 155 656 175 719 3.16e-88 294
Msa0837460 MtrunA17_Chr1g0183681 30.471 594 342 14 115 659 316 887 1.51e-76 269
Msa0837460 MtrunA17_Chr7g0257101 34.269 499 272 12 51 501 416 906 4.28e-75 266
Msa0837460 MtrunA17_Chr7g0257101 39.773 264 139 4 484 742 1168 1416 9.27e-47 180
Msa0837460 MtrunA17_Chr8g0384531 32.486 551 303 14 184 681 384 918 3.28e-70 250
Msa0837460 MtrunA17_Chr1g0175191 39.233 339 176 9 173 506 510 823 2.33e-69 249
Msa0837460 MtrunA17_Chr1g0175191 46.409 181 94 2 494 674 1050 1227 7.37e-43 168
Msa0837460 MtrunA17_Chr4g0039561 93.333 105 7 0 461 565 41 145 4.48e-64 212
Msa0837460 MtrunA17_Chr5g0393461 31.008 516 299 12 184 654 184 687 1.09e-63 229
Msa0837460 MtrunA17_Chr4g0017211 29.693 522 309 11 184 655 1450 1963 7.23e-60 221
Msa0837460 MtrunA17_Chr4g0040301 28.681 523 282 13 212 655 18 528 1.05e-56 207
Msa0837460 MtrunA17_Chr7g0231521 43.868 212 107 6 184 385 39 248 1.39e-45 175
Msa0837460 MtrunA17_Chr7g0231521 33.220 295 171 6 450 729 231 514 4.73e-38 152
Msa0837460 MtrunA17_Chr8g0343171 95.312 64 3 0 462 525 42 105 8.99e-38 137
Msa0837460 MtrunA17_Chr4g0069451 25.479 522 324 18 151 649 133 612 1.04e-30 128
Msa0837460 MtrunA17_Chr7g0224051 26.014 715 407 27 10 637 375 1054 6.88e-30 127
Msa0837460 MtrunA17_Chr3g0114161 26.344 558 306 23 174 644 653 1192 1.10e-26 117
Msa0837460 MtrunA17_Chr2g0296421 24.897 486 326 12 181 637 508 983 1.01e-25 114
Msa0837460 MtrunA17_Chr1g0190381 34.946 186 108 2 502 674 184 369 6.72e-25 109
Msa0837460 MtrunA17_Chr2g0320751 35.632 174 110 2 467 640 812 983 8.42e-25 110
Msa0837460 MtrunA17_Chr2g0320751 26.230 366 181 11 197 494 391 735 6.39e-21 98.6
Msa0837460 MtrunA17_Chr7g0225791 24.366 513 301 16 206 655 752 1240 1.60e-24 110
Msa0837460 MtrunA17_Chr7g0233021 27.056 377 211 13 312 655 841 1186 2.10e-24 110
Msa0837460 MtrunA17_Chr1g0212331 42.029 138 77 2 524 661 887 1021 7.37e-24 108
Msa0837460 MtrunA17_Chr7g0232971 26.835 395 224 10 312 671 904 1268 8.78e-24 107
Msa0837460 MtrunA17_Chr4g0024921 41.176 119 69 1 524 642 784 901 2.01e-23 106
Msa0837460 MtrunA17_Chr1g0191141 24.815 540 320 18 206 673 557 1082 6.98e-23 105
Msa0837460 MtrunA17_Chr7g0233031 26.989 352 236 6 312 655 861 1199 3.10e-22 102
Msa0837460 MtrunA17_Chr7g0233001 25.205 365 235 10 312 655 128 475 1.72e-21 99.0
Msa0837460 MtrunA17_Chr2g0281601 38.983 118 71 1 524 641 1150 1266 6.39e-21 98.6
Msa0837460 MtrunA17_Chr1g0168031 34.868 152 98 1 499 650 980 1130 6.44e-21 98.6
Msa0837460 MtrunA17_Chr1g0168031 25.948 343 180 13 200 494 530 846 2.67e-19 93.6
Msa0837460 MtrunA17_Chr4g0047081 25.147 509 302 18 206 655 702 1190 6.46e-21 98.6
Msa0837460 MtrunA17_Chr8g0352361 23.377 539 325 17 181 665 358 862 1.20e-20 97.4
Msa0837460 MtrunA17_Chr7g0264371 24.954 541 343 15 132 651 227 725 1.44e-19 94.4
Msa0837460 MtrunA17_Chr1g0149871 42.593 108 59 3 157 263 217 322 1.29e-18 87.8
Msa0837460 MtrunA17_Chr7g0255821 23.975 317 190 10 205 494 251 543 3.21e-17 86.3
Msa0837460 MtrunA17_Chr7g0255821 38.655 119 72 1 524 641 668 786 7.65e-17 85.1
Msa0837460 MtrunA17_Chr7g0232991 32.051 156 102 1 520 671 475 630 3.86e-16 82.8
Msa0837460 MtrunA17_Chr5g0437621 34.266 143 88 2 507 644 1107 1248 1.66e-13 74.7
Msa0837460 MtrunA17_Chr2g0320781 31.618 136 88 2 507 637 94 229 1.82e-13 70.9
Msa0837460 MtrunA17_Chr5g0428401 27.429 175 115 3 507 671 1476 1648 2.67e-13 74.3
Msa0837460 MtrunA17_Chr3g0086111 34.286 105 68 1 524 628 552 655 4.39e-12 70.1
Msa0837460 MtrunA17_Chr3g0086111 24.419 258 169 11 184 431 187 428 5.67e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0837460 AT5G66750.1 69.560 772 191 11 11 769 24 764 0.0 1048
Msa0837460 AT3G06400.3 41.627 627 302 10 45 665 81 649 1.33e-148 462
Msa0837460 AT3G06400.2 41.627 627 302 10 45 665 81 649 1.53e-148 462
Msa0837460 AT3G06400.1 41.627 627 302 10 45 665 81 649 1.56e-148 462
Msa0837460 AT5G18620.1 47.870 493 228 7 177 665 187 654 3.42e-148 461
Msa0837460 AT5G18620.2 47.870 493 228 7 177 665 187 654 3.47e-148 461
Msa0837460 AT5G19310.2 45.582 498 238 8 178 665 116 590 7.67e-140 432
Msa0837460 AT5G19310.1 45.582 498 238 8 178 665 380 854 7.25e-137 431
Msa0837460 AT3G06010.1 44.177 498 246 8 178 665 397 872 1.97e-132 421
Msa0837460 AT2G28290.3 43.813 493 252 9 179 660 749 1227 7.47e-124 410
Msa0837460 AT2G28290.4 43.813 493 252 9 179 660 749 1227 7.47e-124 410
Msa0837460 AT2G28290.6 43.813 493 252 9 179 660 750 1228 7.55e-124 410
Msa0837460 AT2G28290.1 43.813 493 252 9 179 660 749 1227 1.14e-123 409
Msa0837460 AT2G28290.5 43.813 493 252 9 179 660 750 1228 1.14e-123 409
Msa0837460 AT2G28290.2 43.813 493 252 9 179 660 749 1227 1.27e-123 409
Msa0837460 AT2G13370.1 39.861 577 294 15 179 738 620 1160 2.26e-114 381
Msa0837460 AT2G13370.2 39.861 577 294 15 179 738 620 1160 2.26e-114 381
Msa0837460 AT2G13370.3 39.861 577 294 15 179 738 620 1160 2.26e-114 381
Msa0837460 AT2G44980.1 40.862 487 253 10 184 655 51 517 1.59e-109 353
Msa0837460 AT2G44980.3 40.040 502 254 12 184 655 51 535 2.45e-109 354
Msa0837460 AT2G25170.1 38.500 600 298 15 156 731 246 798 2.64e-108 360
Msa0837460 AT2G25170.4 38.500 600 298 15 156 731 246 798 2.64e-108 360
Msa0837460 AT2G25170.2 38.500 600 298 15 156 731 263 815 2.96e-108 360
Msa0837460 AT2G25170.3 38.500 600 298 15 156 731 272 824 3.34e-108 360
Msa0837460 AT2G44980.2 40.159 503 253 13 184 655 51 536 6.63e-108 350
Msa0837460 AT4G31900.2 39.645 507 271 9 163 663 163 640 1.59e-106 352
Msa0837460 AT4G31900.1 39.645 507 271 9 163 663 204 681 2.70e-106 352
Msa0837460 AT4G31900.3 39.645 507 271 9 163 663 204 681 3.28e-106 352
Msa0837460 AT2G46020.2 34.520 646 347 17 178 762 975 1605 2.13e-96 330
Msa0837460 AT2G46020.3 34.520 646 347 17 178 762 975 1605 2.13e-96 330
Msa0837460 AT2G46020.4 34.520 646 347 17 178 762 975 1605 2.13e-96 330
Msa0837460 AT2G46020.5 34.520 646 346 17 178 762 975 1604 5.42e-96 328
Msa0837460 AT2G46020.1 34.520 646 346 17 178 762 975 1604 5.42e-96 328
Msa0837460 AT2G46020.6 34.520 646 346 17 178 762 975 1604 5.42e-96 328
Msa0837460 AT5G44800.1 41.235 502 255 12 179 663 684 1162 9.35e-96 328
Msa0837460 AT2G02090.1 34.846 551 259 15 184 658 213 739 8.58e-88 293
Msa0837460 AT2G18760.4 32.094 511 298 9 183 659 384 879 4.27e-76 268
Msa0837460 AT2G18760.1 32.094 511 298 9 183 659 384 879 4.27e-76 268
Msa0837460 AT2G18760.2 32.094 511 298 9 183 659 384 879 4.27e-76 268
Msa0837460 AT2G18760.7 32.094 511 298 9 183 659 384 879 4.27e-76 268
Msa0837460 AT2G18760.5 32.094 511 298 9 183 659 384 879 4.27e-76 268
Msa0837460 AT2G18760.6 32.094 511 298 9 183 659 384 879 4.27e-76 268
Msa0837460 AT2G18760.3 32.094 511 298 9 183 659 443 938 1.18e-75 267
Msa0837460 AT3G57300.1 35.211 497 256 13 45 495 422 898 1.91e-75 267
Msa0837460 AT3G57300.1 51.250 160 77 1 500 659 1200 1358 5.74e-43 169
Msa0837460 AT3G57300.4 35.211 497 256 13 45 495 422 898 1.91e-75 267
Msa0837460 AT3G57300.4 51.250 160 77 1 500 659 1200 1358 5.74e-43 169
Msa0837460 AT3G57300.3 35.211 497 256 13 45 495 422 898 2.33e-75 266
Msa0837460 AT3G57300.2 33.208 530 255 13 45 495 422 931 1.00e-71 256
Msa0837460 AT3G57300.2 51.250 160 77 1 500 659 1233 1391 6.95e-43 169
Msa0837460 AT1G03750.1 27.417 631 360 18 176 723 131 746 1.34e-68 243
Msa0837460 AT3G12810.2 40.506 316 172 6 173 486 521 822 2.08e-68 246
Msa0837460 AT3G12810.2 45.856 181 95 2 494 674 1059 1236 1.12e-42 168
Msa0837460 AT3G12810.1 40.506 316 172 6 173 486 525 826 2.24e-68 246
Msa0837460 AT3G12810.1 45.856 181 95 2 494 674 1063 1240 1.09e-42 168
Msa0837460 AT5G63950.1 31.380 529 299 12 184 666 377 887 3.44e-68 244
Msa0837460 AT5G63950.2 31.274 518 297 11 184 666 377 870 1.23e-64 234
Msa0837460 AT3G54280.1 31.309 527 297 17 183 655 1450 1965 8.83e-62 227
Msa0837460 AT3G54280.2 31.309 527 297 17 183 655 1481 1996 1.41e-61 226
Msa0837460 AT3G19210.3 30.528 511 308 10 184 654 180 683 1.21e-60 219
Msa0837460 AT3G19210.1 30.528 511 308 10 184 654 180 683 2.45e-60 220
Msa0837460 AT3G19210.2 29.941 511 309 10 184 654 180 681 9.65e-58 212
Msa0837460 AT1G02670.6 26.161 646 326 23 107 641 23 628 3.40e-43 167
Msa0837460 AT1G02670.3 26.633 597 299 21 152 641 91 655 6.90e-43 166
Msa0837460 AT1G02670.5 26.066 633 317 23 107 628 23 615 2.08e-41 161
Msa0837460 AT1G02670.2 26.541 584 290 21 152 628 91 642 5.90e-41 160
Msa0837460 AT5G05130.1 24.717 530 276 16 236 664 361 868 1.79e-35 145
Msa0837460 AT1G48310.3 26.337 505 318 14 174 664 162 626 2.67e-32 134
Msa0837460 AT1G48310.2 26.230 488 307 13 174 648 167 614 3.54e-32 134
Msa0837460 AT1G48310.1 26.230 488 307 13 174 648 162 609 3.57e-32 134
Msa0837460 AT3G16600.1 23.744 577 293 18 170 641 39 573 1.97e-28 122
Msa0837460 AT1G05490.1 25.194 516 310 11 206 661 860 1359 3.67e-28 122
Msa0837460 AT3G24340.1 24.806 516 319 15 195 667 601 1090 1.73e-25 114
Msa0837460 AT5G07810.1 24.131 489 314 20 174 628 194 659 1.72e-24 110
Msa0837460 AT3G20010.3 44.538 119 65 1 524 642 628 745 5.35e-24 108
Msa0837460 AT3G20010.2 44.538 119 65 1 524 642 603 720 6.81e-24 108
Msa0837460 AT3G20010.1 44.538 119 65 1 524 642 894 1011 8.10e-24 108
Msa0837460 AT3G20010.5 44.538 119 65 1 524 642 894 1011 8.10e-24 108
Msa0837460 AT3G20010.7 44.538 119 65 1 524 642 894 1011 8.10e-24 108
Msa0837460 AT1G08600.1 35.955 178 101 2 506 670 1094 1271 2.61e-23 107
Msa0837460 AT1G08600.4 35.955 178 101 2 506 670 1115 1292 2.77e-23 107
Msa0837460 AT1G08600.3 35.955 178 101 2 506 670 1115 1292 2.77e-23 107
Msa0837460 AT1G08600.2 35.955 178 101 2 506 670 1115 1292 2.77e-23 107
Msa0837460 AT5G43530.1 42.017 119 68 1 522 640 1127 1244 1.05e-22 105
Msa0837460 AT5G43530.1 24.927 341 189 10 200 494 678 997 2.71e-20 97.1
Msa0837460 AT1G50410.2 42.373 118 67 1 524 641 828 944 1.69e-22 103
Msa0837460 AT1G50410.1 42.373 118 67 1 524 641 828 944 1.69e-22 103
Msa0837460 AT1G50410.3 42.373 118 67 1 524 641 828 944 1.69e-22 103
Msa0837460 AT1G11100.3 40.678 118 69 1 524 641 974 1090 4.80e-22 102
Msa0837460 AT1G05120.1 39.496 119 71 1 524 642 682 799 5.33e-22 102
Msa0837460 AT1G05120.1 30.435 184 86 8 157 314 113 280 8.66e-12 69.3
Msa0837460 AT1G11100.5 40.678 118 69 1 524 641 930 1046 5.66e-22 102
Msa0837460 AT1G11100.5 22.006 359 196 12 187 482 402 739 1.11e-12 72.4
Msa0837460 AT1G05120.2 39.496 119 71 1 524 642 725 842 5.90e-22 102
Msa0837460 AT1G05120.2 30.435 184 86 8 157 314 156 323 1.24e-11 68.9
Msa0837460 AT1G11100.2 40.678 118 69 1 524 641 1116 1232 6.19e-22 102
Msa0837460 AT1G11100.4 40.678 118 69 1 524 641 1117 1233 6.19e-22 102
Msa0837460 AT1G11100.1 40.678 118 69 1 524 641 1073 1189 6.57e-22 102
Msa0837460 AT1G11100.1 22.006 359 196 12 187 482 545 882 7.53e-13 73.2
Msa0837460 AT5G20420.1 24.908 546 319 18 206 676 714 1243 6.90e-22 102
Msa0837460 AT2G21450.2 23.349 651 393 21 48 637 157 762 7.51e-22 101
Msa0837460 AT2G21450.3 23.502 651 392 22 48 637 59 664 8.01e-22 101
Msa0837460 AT2G16390.2 23.404 564 350 20 144 647 301 842 9.07e-22 101
Msa0837460 AT5G22750.1 40.476 126 74 1 515 640 872 996 9.32e-22 101
Msa0837460 AT5G22750.1 24.466 421 226 14 141 494 353 748 1.03e-20 98.2
Msa0837460 AT2G16390.1 23.466 554 342 20 144 637 298 829 1.15e-21 101
Msa0837460 AT2G21450.1 23.349 651 393 21 48 637 150 755 1.51e-21 100
Msa0837460 AT1G02670.4 27.481 393 195 16 152 485 91 452 2.09e-21 99.4
Msa0837460 AT1G61140.3 38.983 118 71 1 524 641 967 1083 4.25e-21 99.8
Msa0837460 AT1G02670.1 38.136 118 72 1 524 641 527 643 4.52e-21 99.0
Msa0837460 AT1G02670.1 30.345 290 152 12 107 368 61 328 2.18e-20 96.7
Msa0837460 AT1G02670.7 38.136 118 72 1 524 641 516 632 4.98e-21 98.6
Msa0837460 AT1G02670.7 33.051 236 130 9 152 368 91 317 2.82e-20 96.3
Msa0837460 AT1G61140.1 38.983 118 71 1 524 641 1125 1241 5.94e-21 99.4
Msa0837460 AT3G42670.4 24.803 508 296 17 206 644 711 1201 1.38e-20 98.2
Msa0837460 AT3G42670.2 24.803 508 296 17 206 644 709 1199 1.43e-20 98.2
Msa0837460 AT3G42670.3 24.803 508 296 17 206 644 709 1199 1.43e-20 98.2
Msa0837460 AT3G42670.1 24.803 508 296 17 206 644 709 1199 1.43e-20 98.2
Msa0837460 AT2G40770.2 31.783 129 78 2 524 642 1451 1579 5.88e-12 70.1
Msa0837460 AT2G40770.1 31.783 129 78 2 524 642 1451 1579 5.88e-12 70.1
Msa0837460 AT2G40770.3 31.783 129 78 2 524 642 1451 1579 5.88e-12 70.1

Find 186 sgRNAs with CRISPR-Local

Find 439 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTATTACTAGAGGGAATTT+TGG 0.168192 5_4:-11434995 None:intergenic
TCCAACAAGTCTTAATAATT+TGG 0.194961 5_4:+11436588 Msa0837460:CDS
TGAGACACTGGAGAAATATT+TGG 0.241336 5_4:+11436416 Msa0837460:CDS
GCTCCTTAGTTTGTTGGATA+TGG 0.241351 5_4:+11439353 Msa0837460:three_prime_UTR
CAAAGCCTGTTCATGTTTAC+AGG 0.245028 5_4:+11438116 Msa0837460:CDS
GTCGTTCTTCACATTGTTCT+TGG 0.264553 5_4:-11433296 None:intergenic
TCCACCAGGGCTGGTGGGTT+GGG 0.265341 5_4:+11437904 Msa0837460:CDS
CCAAGCTTCATTCAATTCTT+AGG 0.276043 5_4:+11436274 Msa0837460:CDS
GAGAAAGAAACCCAATTGTT+TGG 0.304226 5_4:-11434695 None:intergenic
GAATCCTCAAATGGATTTAC+AGG 0.307703 5_4:+11438063 Msa0837460:intron
ACTCTACTCAGAGTTTCTTT+TGG 0.310547 5_4:+11433687 Msa0837460:CDS
CTCTTAGAATCAGTCTTTGA+TGG 0.316379 5_4:+11436646 Msa0837460:CDS
ATGATGCTAAGAAGTGTTTA+AGG 0.317013 5_4:+11435038 Msa0837460:CDS
TTCCACCAGGGCTGGTGGGT+TGG 0.318371 5_4:+11437903 Msa0837460:CDS
ATTGGATGAATGAGATTAAT+AGG 0.319332 5_4:+11434781 Msa0837460:CDS
CTTCGTATTTCAGTAAATCT+TGG 0.325431 5_4:-11438717 None:intergenic
AGAGGAGCAATTATCATATA+TGG 0.330903 5_4:-11434744 None:intergenic
AAGAAGAGAAAATGAGATTC+TGG 0.332887 5_4:-11433155 None:intergenic
TCACAGATACCTCTTCTTCT+AGG 0.335211 5_4:-11433348 None:intergenic
TCAATTGCTCGACCGATTGC+TGG 0.340852 5_4:+11436912 Msa0837460:CDS
GCGCACAAAGCCTTCCCTTA+TGG 0.344214 5_4:+11438337 Msa0837460:CDS
TTTCAGTAAATCTTGGAGTT+AGG 0.345267 5_4:-11438710 None:intergenic
ATATTAGGAAGAGGATGTTT+TGG 0.349530 5_4:+11438842 Msa0837460:intron
TTGATTTCCTTGTGGCAAAA+TGG 0.351243 5_4:+11434627 Msa0837460:CDS
TTCTTTAGATCTTGTAATCA+TGG 0.352463 5_4:-11434481 None:intergenic
ACCAAATTATTAAGACTTGT+TGG 0.352586 5_4:-11436589 None:intergenic
GGGAAGACAATCCAAACAAT+TGG 0.358044 5_4:+11434684 Msa0837460:CDS
TAAGCTGCTCCTTAGTTTGT+TGG 0.359492 5_4:+11439347 Msa0837460:three_prime_UTR
ATAGCTCAGCCAAGTTATTC+TGG 0.362438 5_4:-11435301 None:intergenic
GCTTCAGGGAAAAGCCAAAA+AGG 0.366302 5_4:+11434449 Msa0837460:intron
GCCTTCCCTTATGGATGAAA+TGG 0.367031 5_4:+11438346 Msa0837460:CDS
GACCAAAGTGCTAGATATAA+TGG 0.367410 5_4:+11437075 Msa0837460:CDS
CTTGCTGATCAAATGGGTCT+TGG 0.368472 5_4:+11434663 Msa0837460:CDS
TCAAGAGATGAGAATATATC+AGG 0.373285 5_4:-11435347 None:intergenic
AAGAAAGATTCTGCAGTTGC+TGG 0.373653 5_4:-11437878 None:intergenic
ATTAATCTCATTCATCCAAT+TGG 0.375683 5_4:-11434778 None:intergenic
TTCGAAGTTTGCAGGATTGA+TGG 0.389977 5_4:+11437121 Msa0837460:CDS
TGATTCACAGTTTAATAAGT+TGG 0.390841 5_4:+11433642 Msa0837460:CDS
CTACATCTAGTTCCGTTAGT+AGG 0.399297 5_4:-11439236 None:intergenic
CTCTATCAACCCTCTCCAAT+TGG 0.399370 5_4:+11434763 Msa0837460:CDS
GAAGGAAGTGGAGGTGAAAT+CGG 0.400005 5_4:+11433492 Msa0837460:intron
TTCTTTCCACCAGGGCTGGT+GGG 0.401539 5_4:+11437899 Msa0837460:CDS
TTTCTTCTTTCCACCAGGGC+TGG 0.404452 5_4:+11437895 Msa0837460:CDS
AAAAGGGTTTCGAAGTTTGC+AGG 0.409783 5_4:+11437113 Msa0837460:CDS
TTTCTCAGTTCTTTCTTCCT+CGG 0.414953 5_4:-11434532 None:intergenic
GTGGTGATGCCAACTGCGGC+AGG 0.417009 5_4:+11439029 Msa0837460:CDS
TTGCTGATCAAATGGGTCTT+GGG 0.417375 5_4:+11434664 Msa0837460:CDS
AAACCTCCATTTCATCCATA+AGG 0.417476 5_4:-11438352 None:intergenic
GAGCTGATGCCTTTACTAAC+TGG 0.418049 5_4:+11434564 Msa0837460:CDS
TGGGATTCTTGCTGATCAAA+TGG 0.425534 5_4:+11434656 Msa0837460:CDS
CTTCTTTCCACCAGGGCTGG+TGG 0.426111 5_4:+11437898 Msa0837460:CDS
AACTGTGAATCATTCAGATT+CGG 0.441376 5_4:-11433631 None:intergenic
GGAGGTGAAATCGGAGGAAG+AGG 0.441683 5_4:+11433501 Msa0837460:CDS
TTCATCCTACGCAACAGAAA+TGG 0.442959 5_4:-11436297 None:intergenic
GGAAGACAATCCAAACAATT+GGG 0.444585 5_4:+11434685 Msa0837460:CDS
AGTTTGCAGGATTGATGGTT+CGG 0.447412 5_4:+11437126 Msa0837460:CDS
GCGAGCCTGTAAACATGAAC+AGG 0.450451 5_4:-11438121 None:intergenic
AGTTTACTCTCTTCTTCATC+CGG 0.450638 5_4:-11434110 None:intergenic
GTTCGGTGAAGCTGGATGAT+AGG 0.450647 5_4:+11437143 Msa0837460:CDS
TCATCTAAAATCGAAAGGAT+TGG 0.454533 5_4:+11434716 Msa0837460:CDS
CCTTAGTTTGTTGGATATGG+TGG 0.455529 5_4:+11439356 Msa0837460:three_prime_UTR
TGAAGACCTGGAGAAGCTCT+TGG 0.461434 5_4:+11438923 Msa0837460:CDS
GATTGATGGTTCGGTGAAGC+TGG 0.464329 5_4:+11437135 Msa0837460:CDS
TTGTGGCAAAATGGATTGAA+TGG 0.465688 5_4:+11434636 Msa0837460:CDS
AACCTCCATTTCATCCATAA+GGG 0.465902 5_4:-11438351 None:intergenic
GAATCTTTCTTCTTTCCACC+AGG 0.466276 5_4:+11437890 Msa0837460:CDS
TCAAATGGATTTACAGGCCA+TGG 0.467434 5_4:+11438069 Msa0837460:CDS
TATTCCCAACCCACCAGCCC+TGG 0.468568 5_4:-11437908 None:intergenic
ATTACATCTCAAACCACAAA+AGG 0.469535 5_4:-11439132 None:intergenic
TGAGCATCAGAAGAACTTGC+AGG 0.472788 5_4:+11436380 Msa0837460:CDS
GGTGATGCCAACTGCGGCAG+GGG 0.474198 5_4:+11439031 Msa0837460:CDS
CTTAGTTTGTTGGATATGGT+GGG 0.475583 5_4:+11439357 Msa0837460:three_prime_UTR
TCCAGGCCCTTTAAGAGAAA+AGG 0.476786 5_4:-11439000 None:intergenic
ATCCATTATATCTAGCACTT+TGG 0.479735 5_4:-11437077 None:intergenic
TGCGGGTGAACAAGAGAAAC+CGG 0.480040 5_4:+11434091 Msa0837460:CDS
TTTCTCTTAAAGGGCCTGGA+TGG 0.482002 5_4:+11439003 Msa0837460:CDS
GGCATCACCACTTCCCATCC+AGG 0.482270 5_4:-11439017 None:intergenic
CAAATAGCCGCTCCAGCAAT+CGG 0.485889 5_4:-11436924 None:intergenic
CTGTCGGGAAAGAGCACTAC+TGG 0.491725 5_4:+11436118 Msa0837460:CDS
TTACCATGGTAGATAACAGC+AGG 0.494363 5_4:-11434920 None:intergenic
CAGTAGTGCTCTTTCCCGAC+AGG 0.496157 5_4:-11436117 None:intergenic
GTATTCTTTATGACAGTGAC+TGG 0.499135 5_4:+11437953 Msa0837460:CDS
GGGATTCTTGCTGATCAAAT+GGG 0.499534 5_4:+11434657 Msa0837460:CDS
TGGAGCAACAATGGAAGAGT+TGG 0.503178 5_4:+11436138 Msa0837460:CDS
AAGACTGATTCTAAGAGGTC+AGG 0.504261 5_4:-11436640 None:intergenic
CTTTCTCATCTAAAATCGAA+AGG 0.509899 5_4:+11434711 Msa0837460:CDS
AGTGTTTAAGGTCATACAGT+TGG 0.511185 5_4:+11435050 Msa0837460:CDS
TCTTCTTCTAGGACTGAAGT+TGG 0.512151 5_4:-11433337 None:intergenic
ATGGCCTGTAAATCCATTTG+AGG 0.512435 5_4:-11438067 None:intergenic
AGAGAAAGGACAATTTCATC+AGG 0.513981 5_4:+11438313 Msa0837460:CDS
ATCAACTGAAGGGTGTTAAG+TGG 0.517699 5_4:+11434604 Msa0837460:CDS
CTCTCTGATATTTGTTACCA+TGG 0.519080 5_4:-11434934 None:intergenic
GGATGAAGAAGAGAGTAAAC+TGG 0.520666 5_4:+11434112 Msa0837460:CDS
GAAGTTGGTGATTCCACTGC+AGG 0.522177 5_4:-11433322 None:intergenic
TGTACTCCAGAATCCTCAAA+TGG 0.523054 5_4:+11438054 Msa0837460:intron
CCACCATATCCAACAAACTA+AGG 0.523341 5_4:-11439356 None:intergenic
CTTCTGATGCTCAGTCATGT+TGG 0.524860 5_4:-11436370 None:intergenic
CTCATTCATCCAATTGGAGA+GGG 0.526511 5_4:-11434772 None:intergenic
ATGGATAGATGTCACAGAAT+CGG 0.529752 5_4:+11438088 Msa0837460:CDS
AAATGTGAAGACTGAGGATG+TGG 0.530087 5_4:+11434503 Msa0837460:CDS
TGCGATCCAAGAGCTTCTCC+AGG 0.531714 5_4:-11438929 None:intergenic
GAGCATGTGGTGATAGAGAA+AGG 0.531994 5_4:+11438299 Msa0837460:CDS
CTAAAATCGAAAGGATTGGA+TGG 0.533235 5_4:+11434720 Msa0837460:CDS
TTCTCTTAAAGGGCCTGGAT+GGG 0.540931 5_4:+11439004 Msa0837460:CDS
TAAAGGGCCTGGATGGGAAG+TGG 0.541437 5_4:+11439010 Msa0837460:CDS
GTGGGACTGCATTGATTCAA+AGG 0.541607 5_4:+11439375 Msa0837460:three_prime_UTR
TTAGGCCATTTCTGTTGCGT+AGG 0.541737 5_4:+11436292 Msa0837460:CDS
CCTAAGAATTGAATGAAGCT+TGG 0.544169 5_4:-11436274 None:intergenic
CATCAAAGACTGATTCTAAG+AGG 0.545515 5_4:-11436645 None:intergenic
ATTGAAATCTTATCAACTGA+AGG 0.547286 5_4:+11434593 Msa0837460:CDS
AACTTCAGTCCTAGAAGAAG+AGG 0.548276 5_4:+11433339 Msa0837460:CDS
TGCTGGAGCGGCTATTTGCA+CGG 0.548438 5_4:+11436929 Msa0837460:CDS
AGAATAACTTGGCTGAGCTA+TGG 0.550121 5_4:+11435303 Msa0837460:CDS
TACACCGCTCCAGAATAACT+TGG 0.551035 5_4:+11435292 Msa0837460:CDS
CTCTTGAAGAATTTGAGTCA+TGG 0.551617 5_4:+11435363 Msa0837460:CDS
GGGAAATTAGCTGTTGAGAG+TGG 0.553051 5_4:-11439063 None:intergenic
AGCTCGTGCAAAGGAAGAAG+AGG 0.554090 5_4:+11433591 Msa0837460:CDS
GAAGTATCTTGTTGTTGATG+AGG 0.554954 5_4:+11435072 Msa0837460:CDS
TGGTTGTATCATTGAAGTCC+TGG 0.555540 5_4:-11437858 None:intergenic
TGTGGCAAAATGGATTGAAT+GGG 0.556206 5_4:+11434637 Msa0837460:CDS
CAATTGGAGAGGGTTGATAG+AGG 0.557093 5_4:-11434762 None:intergenic
TAGATAACAGCAGGGAGCGT+TGG 0.559287 5_4:-11434911 None:intergenic
TGCTCGACCGATTGCTGGAG+CGG 0.560952 5_4:+11436917 Msa0837460:CDS
AAACATATGCCTAGAACAGT+TGG 0.561393 5_4:+11434971 Msa0837460:CDS
TTCCCTTATGGATGAAATGG+AGG 0.562107 5_4:+11438349 Msa0837460:CDS
GAGCACTACTGGAGCAACAA+TGG 0.565222 5_4:+11436129 Msa0837460:CDS
CATCCTCACTAATTTGCAGT+TGG 0.566871 5_4:-11435228 None:intergenic
TCCATTTCATCCATAAGGGA+AGG 0.568951 5_4:-11438347 None:intergenic
CATAAGAAGTTATTACTAGA+GGG 0.573729 5_4:-11435003 None:intergenic
TGAAGCTGGATGATAGGAAA+CGG 0.574761 5_4:+11437149 Msa0837460:CDS
TCATTTAATTAATGAGACAC+TGG 0.575085 5_4:+11436404 Msa0837460:CDS
TTGGACAAGAAACGATCAGT+TGG 0.576949 5_4:+11436435 Msa0837460:CDS
TCCCAACCCACCAGCCCTGG+TGG 0.577934 5_4:-11437905 None:intergenic
TTGAAATCTTATCAACTGAA+GGG 0.577947 5_4:+11434594 Msa0837460:CDS
TGTTAATAGTGTTGTGTGAG+TGG 0.581480 5_4:-11433096 None:intergenic
ACAAGCAAATATGAATTGAG+TGG 0.583572 5_4:-11439321 None:intergenic
AATCTTTCTTCTTTCCACCA+GGG 0.584100 5_4:+11437891 Msa0837460:CDS
GCTGGATGATAGGAAACGGC+AGG 0.584808 5_4:+11437153 Msa0837460:CDS
CCTCTGACAATTGACATCAC+TGG 0.585747 5_4:-11439181 None:intergenic
TCATAAGAAGTTATTACTAG+AGG 0.585764 5_4:-11435004 None:intergenic
ATTCTGGAAGAGAAGATGAA+AGG 0.590006 5_4:-11433139 None:intergenic
AAGAACTGAGAAAGAGCAGA+GGG 0.591530 5_4:+11434542 Msa0837460:CDS
AATTGTCAGAGGTAATGTCC+TGG 0.592810 5_4:+11439192 Msa0837460:three_prime_UTR
GTGATGCCAACTGCGGCAGG+GGG 0.593834 5_4:+11439032 Msa0837460:CDS
ATCAGAGAGATGAAATCAGA+AGG 0.593838 5_4:+11434948 Msa0837460:CDS
TGGTGATGCCAACTGCGGCA+GGG 0.594432 5_4:+11439030 Msa0837460:CDS
GAAAATGGATGATATTACAA+TGG 0.599478 5_4:+11433711 Msa0837460:CDS
AGGTTCTGATCTTCAGTCAG+TGG 0.599711 5_4:+11437053 Msa0837460:intron
AGATATTAGTGATGAAGACC+TGG 0.600162 5_4:+11438911 Msa0837460:CDS
TATTCTTTATGACAGTGACT+GGG 0.603626 5_4:+11437954 Msa0837460:CDS
TCTCATTCATCCAATTGGAG+AGG 0.606036 5_4:-11434773 None:intergenic
TAAAATCGAAAGGATTGGAT+GGG 0.606925 5_4:+11434721 Msa0837460:CDS
CTCCCTGCTGTTATCTACCA+TGG 0.607078 5_4:+11434917 Msa0837460:CDS
CTGATGCCTTTACTAACTGG+TGG 0.607326 5_4:+11434567 Msa0837460:CDS
CGCTACTGCACAATCAGTAG+AGG 0.608250 5_4:+11438141 Msa0837460:CDS
GGAAGTGGAGGTGAAATCGG+AGG 0.610191 5_4:+11433495 Msa0837460:intron
TCAATTATCTCATTCACAGG+AGG 0.610756 5_4:-11436874 None:intergenic
TGTGTATGTGAAGGAAGTGG+AGG 0.617706 5_4:+11433483 Msa0837460:intron
TTAAGTGGTTGATTTCCTTG+TGG 0.620476 5_4:+11434619 Msa0837460:CDS
CAAGTTGAAGCTTGAGCATG+TGG 0.621259 5_4:+11438286 Msa0837460:CDS
GTCAGAGGTAATGTCCTGGA+GGG 0.623098 5_4:+11439196 Msa0837460:three_prime_UTR
TGTACCGAAAACAATGGCTG+AGG 0.624038 5_4:+11433549 Msa0837460:CDS
GTTGCTGAAAGCTCGTGCAA+AGG 0.624525 5_4:+11433582 Msa0837460:CDS
GATTCTGTGACATCTATCCA+TGG 0.629171 5_4:-11438086 None:intergenic
AAAGAACTGAGAAAGAGCAG+AGG 0.631747 5_4:+11434541 Msa0837460:CDS
TGTAGAAATGAAGCAACTTG+TGG 0.631956 5_4:+11439254 Msa0837460:three_prime_UTR
ATGCCAACTGCAAATTAGTG+AGG 0.632322 5_4:+11435225 Msa0837460:CDS
CTGATTCTAAGAGGTCAGGA+TGG 0.643894 5_4:-11436636 None:intergenic
GAAGAACGACGATCCTGCAG+TGG 0.650078 5_4:+11433309 Msa0837460:CDS
GCTATTTGCACGGAATCACA+AGG 0.650119 5_4:+11436939 Msa0837460:CDS
TAAAGAAAATGTGAAGACTG+AGG 0.654292 5_4:+11434497 Msa0837460:CDS
CCAGTGATGTCAATTGTCAG+AGG 0.657399 5_4:+11439181 Msa0837460:three_prime_UTR
AGATTTACTGAAATACGAAG+AGG 0.665103 5_4:+11438720 Msa0837460:CDS
TCAGCCAAGTTATTCTGGAG+CGG 0.671648 5_4:-11435296 None:intergenic
CTATTCACAAATCCAGTGTG+TGG 0.671949 5_4:+11439295 Msa0837460:three_prime_UTR
TGTCAGAGGTAATGTCCTGG+AGG 0.681189 5_4:+11439195 Msa0837460:three_prime_UTR
ATGTTGAGCTAATGTTGCCA+CGG 0.684746 5_4:+11436325 Msa0837460:CDS
ATCGCTTGTACCGAAAACAA+TGG 0.696297 5_4:+11433543 Msa0837460:CDS
TCGAGATGAAGAAACCGCTG+AGG 0.697243 5_4:+11438872 Msa0837460:CDS
ATTGAGTGGATACCACACAC+TGG 0.698123 5_4:-11439307 None:intergenic
ATGATGATTTACTAAACCAG+CGG 0.702382 5_4:-11439418 None:intergenic
TACAAGTGTCAGCTGCAGTG+AGG 0.704555 5_4:-11437933 None:intergenic
TGAGGATGTGGATTTGACCG+AGG 0.709493 5_4:+11434515 Msa0837460:CDS
TACCATGGTAGATAACAGCA+GGG 0.711491 5_4:-11434919 None:intergenic
GGAAGTGGTGATGCCAACTG+CGG 0.740252 5_4:+11439025 Msa0837460:CDS
ACTCACAGTATTGCATTGTG+AGG 0.751205 5_4:-11434174 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATAAAGAACATTTTTA+GGG - chr5_4:11433206-11433225 None:intergenic 10.0%
!!! AAAATATAAAGAACATTTTT+AGG - chr5_4:11433207-11433226 None:intergenic 10.0%
!!! TTTTAAAGAAAATTCAAAAA+TGG + chr5_4:11437349-11437368 Msa0837460:intron 10.0%
!!! AAAATTTTTCAGAAAGTAAA+GGG + chr5_4:11434015-11434034 Msa0837460:intron 15.0%
!! TTTCCTTAATAAATGTAAAT+AGG + chr5_4:11434882-11434901 Msa0837460:intron 15.0%
!! AAACCTATTTACATTTATTA+AGG - chr5_4:11434888-11434907 None:intergenic 15.0%
!! TTTCATTTAAGTAAATTCAT+TGG - chr5_4:11435722-11435741 None:intergenic 15.0%
!! GCATAAAATAAGAAAAATAA+AGG - chr5_4:11436073-11436092 None:intergenic 15.0%
!!! AATTTTTCATTTGAAAGAAA+GGG + chr5_4:11436473-11436492 Msa0837460:intron 15.0%
!!! GATTATTATTTTAGTGAAAA+GGG + chr5_4:11437097-11437116 Msa0837460:CDS 15.0%
!! ATATTAACAAAAGTAATTTG+AGG - chr5_4:11437219-11437238 None:intergenic 15.0%
!!! GTTTTTATGATAATTTGATA+AGG + chr5_4:11437398-11437417 Msa0837460:intron 15.0%
!! TACAAATTGTTAAAATTCTA+TGG + chr5_4:11438612-11438631 Msa0837460:intron 15.0%
!!! ATTTTGATGTGTTTCTAAAA+TGG + chr5_4:11433454-11433473 Msa0837460:intron 20.0%
!!! TTTTGATGTGTTTCTAAAAT+GGG + chr5_4:11433455-11433474 Msa0837460:intron 20.0%
!! AACAAAACAAAAACACAAAA+GGG - chr5_4:11433752-11433771 None:intergenic 20.0%
!! AAACAAAACAAAAACACAAA+AGG - chr5_4:11433753-11433772 None:intergenic 20.0%
!!! GTTTTGTTTTTACTTTTTTC+CGG + chr5_4:11433764-11433783 Msa0837460:intron 20.0%
!! CAAAAACATGTATAATATTC+CGG - chr5_4:11433786-11433805 None:intergenic 20.0%
!! ACTAAAATATAGTTTATGAC+AGG + chr5_4:11433865-11433884 Msa0837460:intron 20.0%
!!! CTTAAAATAACACCAATTTT+TGG + chr5_4:11433980-11433999 Msa0837460:intron 20.0%
!!! CTATTTTCATTTCCAAAAAT+TGG - chr5_4:11433995-11434014 None:intergenic 20.0%
!!! GAAAATTTTTCAGAAAGTAA+AGG + chr5_4:11434014-11434033 Msa0837460:intron 20.0%
!!! AAATTTTTCAGAAAGTAAAG+GGG + chr5_4:11434016-11434035 Msa0837460:intron 20.0%
!!! ATTTTATTTTTTGTAACCTC+AGG + chr5_4:11435187-11435206 Msa0837460:intron 20.0%
!!! TTTTATTTTTTGTAACCTCA+GGG + chr5_4:11435188-11435207 Msa0837460:intron 20.0%
!! TTATTTCCTACTATATTGTT+CGG + chr5_4:11435490-11435509 Msa0837460:intron 20.0%
!! TGTTATCTACTTTGTTAATT+AGG - chr5_4:11435582-11435601 None:intergenic 20.0%
!!! AATGTCTTTTATCATATCAA+AGG + chr5_4:11435643-11435662 Msa0837460:intron 20.0%
!!! ATGTCTTTTATCATATCAAA+GGG + chr5_4:11435644-11435663 Msa0837460:intron 20.0%
!! TATTGAAATGTAATGACAAT+GGG - chr5_4:11435681-11435700 None:intergenic 20.0%
!! TTATTGAAATGTAATGACAA+TGG - chr5_4:11435682-11435701 None:intergenic 20.0%
!! ATATGAAGAATTGATACAAT+GGG - chr5_4:11435841-11435860 None:intergenic 20.0%
!! TATATGAAGAATTGATACAA+TGG - chr5_4:11435842-11435861 None:intergenic 20.0%
!! AAAAGATGTACATAACAAAA+GGG - chr5_4:11436007-11436026 None:intergenic 20.0%
!!! ATGCATTCAATTTTTTTTGT+AGG + chr5_4:11436089-11436108 Msa0837460:intron 20.0%
!!! CAATTTTTCATTTGAAAGAA+AGG + chr5_4:11436472-11436491 Msa0837460:intron 20.0%
!! AATGAGATAATTGAAAAATG+TGG + chr5_4:11436883-11436902 Msa0837460:CDS 20.0%
!!! GGATTATTATTTTAGTGAAA+AGG + chr5_4:11437096-11437115 Msa0837460:CDS 20.0%
!!! CTTTTGTTAATATGTTTTGT+TGG + chr5_4:11437226-11437245 Msa0837460:intron 20.0%
!! TTAATAATGAAGATCATGAA+AGG - chr5_4:11437280-11437299 None:intergenic 20.0%
!! CTGTCATAAATGATAATTTA+CGG + chr5_4:11437305-11437324 Msa0837460:intron 20.0%
!! TTTGAATATGAGACTAATTA+AGG - chr5_4:11438575-11438594 None:intergenic 20.0%
!!! TTTTAACAATTTGTAGTATG+AGG - chr5_4:11438607-11438626 None:intergenic 20.0%
!! AAATTGTTAAAATTCTATGG+AGG + chr5_4:11438615-11438634 Msa0837460:intron 20.0%
!!! TTTTATTTATTTAGGGTGAA+TGG + chr5_4:11438682-11438701 Msa0837460:intron 20.0%
!! TAAGTTTGATTATTGAGATT+TGG + chr5_4:11438765-11438784 Msa0837460:intron 20.0%
!!! TTTTTTACCATGTTTTAACA+TGG + chr5_4:11438800-11438819 Msa0837460:intron 20.0%
!!! TTTAAAAAATTTGCCTTTTG+TGG + chr5_4:11439119-11439138 Msa0837460:three_prime_UTR 20.0%
!!! CATTTTTAGGGTTTGAAAAA+TGG + chr5_4:11433270-11433289 Msa0837460:intron 25.0%
! TGATTCACAGTTTAATAAGT+TGG + chr5_4:11433642-11433661 Msa0837460:CDS 25.0%
! GAAAATGGATGATATTACAA+TGG + chr5_4:11433711-11433730 Msa0837460:CDS 25.0%
! AAAACACAAAAGGGTTAAAA+GGG - chr5_4:11433743-11433762 None:intergenic 25.0%
! AAAAACACAAAAGGGTTAAA+AGG - chr5_4:11433744-11433763 None:intergenic 25.0%
!! CGGAATATTATACATGTTTT+TGG + chr5_4:11433784-11433803 Msa0837460:intron 25.0%
!!! TTTGTTATCATTGTTTTGCT+AGG + chr5_4:11434067-11434086 Msa0837460:intron 25.0%
! AACTCCTAGACAAAATAATA+CGG - chr5_4:11434213-11434232 None:intergenic 25.0%
!! ATTATGTTTGAAATTGCTTC+AGG + chr5_4:11434434-11434453 Msa0837460:intron 25.0%
!! TTATGTTTGAAATTGCTTCA+GGG + chr5_4:11434435-11434454 Msa0837460:intron 25.0%
! TTCTTTAGATCTTGTAATCA+TGG - chr5_4:11434484-11434503 None:intergenic 25.0%
! ATTGAAATCTTATCAACTGA+AGG + chr5_4:11434593-11434612 Msa0837460:CDS 25.0%
! TTGAAATCTTATCAACTGAA+GGG + chr5_4:11434594-11434613 Msa0837460:CDS 25.0%
! ATTAATCTCATTCATCCAAT+TGG - chr5_4:11434781-11434800 None:intergenic 25.0%
! ATTGGATGAATGAGATTAAT+AGG + chr5_4:11434781-11434800 Msa0837460:CDS 25.0%
!! TTATTACTAGAGGGAATTTT+GGG - chr5_4:11434997-11435016 None:intergenic 25.0%
! CATAAGAAGTTATTACTAGA+GGG - chr5_4:11435006-11435025 None:intergenic 25.0%
! TCATAAGAAGTTATTACTAG+AGG - chr5_4:11435007-11435026 None:intergenic 25.0%
!! CTGTTTGAAATATAATGTCT+TGG + chr5_4:11435442-11435461 Msa0837460:intron 25.0%
! ATTAGTGCAATTTCCAAAAA+AGG + chr5_4:11435524-11435543 Msa0837460:intron 25.0%
! TATGAAGAATTGATACAATG+GGG - chr5_4:11435840-11435859 None:intergenic 25.0%
! GTATCAATTCTTCATATACA+AGG + chr5_4:11435844-11435863 Msa0837460:intron 25.0%
! TCATGGTTTATATTCTAACA+AGG + chr5_4:11435936-11435955 Msa0837460:intron 25.0%
! CAAAAGATGTACATAACAAA+AGG - chr5_4:11436008-11436027 None:intergenic 25.0%
!!! CTTTTGTTATGTACATCTTT+TGG + chr5_4:11436006-11436025 Msa0837460:intron 25.0%
!! ATTGATCGGTTTAATACAAA+AGG + chr5_4:11436033-11436052 Msa0837460:intron 25.0%
!! TTGATCGGTTTAATACAAAA+GGG + chr5_4:11436034-11436053 Msa0837460:intron 25.0%
!!! TTCTAGTTCATTTGAAGAAT+GGG - chr5_4:11436224-11436243 None:intergenic 25.0%
! TCATTTAATTAATGAGACAC+TGG + chr5_4:11436404-11436423 Msa0837460:CDS 25.0%
! TCCAACAAGTCTTAATAATT+TGG + chr5_4:11436588-11436607 Msa0837460:CDS 25.0%
! ACCAAATTATTAAGACTTGT+TGG - chr5_4:11436592-11436611 None:intergenic 25.0%
!! TTTTCAATTATCTCATTCAC+AGG - chr5_4:11436880-11436899 None:intergenic 25.0%
! CTGTTATTAAAAATGCTCAA+AGG + chr5_4:11437376-11437395 Msa0837460:intron 25.0%
!!! ACTTTTAGGATATAGTTTCT+TGG - chr5_4:11437465-11437484 None:intergenic 25.0%
!!! GCTTCAAAAAAAGTACTTTT+AGG - chr5_4:11437479-11437498 None:intergenic 25.0%
! TGGAATAATTTAATGCATAG+AGG - chr5_4:11437596-11437615 None:intergenic 25.0%
! TAATATATGTAGACAAACTC+TGG + chr5_4:11437672-11437691 Msa0837460:intron 25.0%
!!! CTAAATTGAGGTTTTTTTGT+TGG + chr5_4:11437811-11437830 Msa0837460:intron 25.0%
! ATACTTAGATGAACATGATA+TGG + chr5_4:11438226-11438245 Msa0837460:intron 25.0%
!!! TCTTCTGTGTTTTTTATGAA+TGG + chr5_4:11438403-11438422 Msa0837460:intron 25.0%
!!! TGTTGTTTTGGTTATTTACA+TGG + chr5_4:11438467-11438486 Msa0837460:intron 25.0%
! TAGGCAAGTTAAAAATTATC+TGG - chr5_4:11438493-11438512 None:intergenic 25.0%
! GAGACTAATTAAGGATTAAA+AGG - chr5_4:11438566-11438585 None:intergenic 25.0%
! TCTTCCTAATATCACAAATA+AGG - chr5_4:11438834-11438853 None:intergenic 25.0%
! TTATTTGTGATATTAGGAAG+AGG + chr5_4:11438833-11438852 Msa0837460:intron 25.0%
!! TTAGTACCTTTTCTCTTAAA+GGG + chr5_4:11438994-11439013 Msa0837460:CDS 25.0%
!! ATTTTTGTAAAGCCTACTAA+CGG + chr5_4:11439224-11439243 Msa0837460:three_prime_UTR 25.0%
AAGAAGAGAAAATGAGATTC+TGG - chr5_4:11433158-11433177 None:intergenic 30.0%
AACTGTGAATCATTCAGATT+CGG - chr5_4:11433634-11433653 None:intergenic 30.0%
!! AGAGTTTCTTTTGGAGAAAA+TGG + chr5_4:11433696-11433715 Msa0837460:CDS 30.0%
TGATTTCGAAATTCATGAGT+TGG + chr5_4:11433842-11433861 Msa0837460:intron 30.0%
TAATTTGATCCATGTGTTTC+TGG + chr5_4:11433899-11433918 Msa0837460:intron 30.0%
ATAACAAAACCAACAACCTA+AGG - chr5_4:11434043-11434062 None:intergenic 30.0%
TAAACTGGTTGCAAAAAAGA+AGG + chr5_4:11434127-11434146 Msa0837460:CDS 30.0%
AAACTGGTTGCAAAAAAGAA+GGG + chr5_4:11434128-11434147 Msa0837460:CDS 30.0%
!! TGTACCGTATTATTTTGTCT+AGG + chr5_4:11434206-11434225 Msa0837460:intron 30.0%
TAGTGAAAGATGTAAGTTTG+AGG + chr5_4:11434282-11434301 Msa0837460:intron 30.0%
ATAACAAATTCACAGGAGTT+AGG - chr5_4:11434374-11434393 None:intergenic 30.0%
TAAAGAAAATGTGAAGACTG+AGG + chr5_4:11434497-11434516 Msa0837460:CDS 30.0%
! AATTTTCCACCAGTTAGTAA+AGG - chr5_4:11434576-11434595 None:intergenic 30.0%
! CTTTCTCATCTAAAATCGAA+AGG + chr5_4:11434711-11434730 Msa0837460:CDS 30.0%
! TCATCTAAAATCGAAAGGAT+TGG + chr5_4:11434716-11434735 Msa0837460:CDS 30.0%
TAAAATCGAAAGGATTGGAT+GGG + chr5_4:11434721-11434740 Msa0837460:CDS 30.0%
AGAGGAGCAATTATCATATA+TGG - chr5_4:11434747-11434766 None:intergenic 30.0%
! GTTATTACTAGAGGGAATTT+TGG - chr5_4:11434998-11435017 None:intergenic 30.0%
!! ATGATGCTAAGAAGTGTTTA+AGG + chr5_4:11435038-11435057 Msa0837460:CDS 30.0%
! GAAAATAAGCTTCTTTTGAC+TGG + chr5_4:11435269-11435288 Msa0837460:CDS 30.0%
TCAAGAGATGAGAATATATC+AGG - chr5_4:11435350-11435369 None:intergenic 30.0%
AAGTGTGATCAATAACCAAT+AGG - chr5_4:11435402-11435421 None:intergenic 30.0%
!!! GGTCTATAATCATCCTTTTT+TGG - chr5_4:11435540-11435559 None:intergenic 30.0%
! GGTCAAGTTACTTGTTAATT+AGG - chr5_4:11435561-11435580 None:intergenic 30.0%
! AACAATGTAGTGCTTTGTTA+TGG + chr5_4:11435607-11435626 Msa0837460:intron 30.0%
! TTCCTTTTCATTTGAATCTG+TGG + chr5_4:11435784-11435803 Msa0837460:intron 30.0%
ATGAAGAATTGATACAATGG+GGG - chr5_4:11435839-11435858 None:intergenic 30.0%
AATATCTTATGAGCATAACC+TGG - chr5_4:11435974-11435993 None:intergenic 30.0%
GTACATAACAAAAGGGAAAA+GGG - chr5_4:11436000-11436019 None:intergenic 30.0%
TGTACATAACAAAAGGGAAA+AGG - chr5_4:11436001-11436020 None:intergenic 30.0%
! CATCTTTTGGCAATATTGAT+CGG + chr5_4:11436019-11436038 Msa0837460:intron 30.0%
! AAGAAAAATAAAGGCACACA+TGG - chr5_4:11436064-11436083 None:intergenic 30.0%
! TTTTTGTAGGTTTAACCTGT+CGG + chr5_4:11436102-11436121 Msa0837460:intron 30.0%
CAATCAAAGAACACATACTT+GGG - chr5_4:11436179-11436198 None:intergenic 30.0%
TCAATCAAAGAACACATACT+TGG - chr5_4:11436180-11436199 None:intergenic 30.0%
!! CTTCTAGTTCATTTGAAGAA+TGG - chr5_4:11436225-11436244 None:intergenic 30.0%
CATTCTTCAAATGAACTAGA+AGG + chr5_4:11436223-11436242 Msa0837460:intron 30.0%
AATTAGCTAAACCATCCAAT+CGG - chr5_4:11436688-11436707 None:intergenic 30.0%
AATTAGCTAAACCATCCAAT+CGG - chr5_4:11436688-11436707 None:intergenic 30.0%
AAGTTGTGTTATACAAGCAT+TGG - chr5_4:11437185-11437204 None:intergenic 30.0%
TGATAATTTACGGATCTGTT+TGG + chr5_4:11437315-11437334 Msa0837460:intron 30.0%
AACTTGTAAACATGCTTAAG+GGG - chr5_4:11437436-11437455 None:intergenic 30.0%
CAACTTGTAAACATGCTTAA+GGG - chr5_4:11437437-11437456 None:intergenic 30.0%
AAATTGAAGAGGCTAAATTG+AGG + chr5_4:11437799-11437818 Msa0837460:intron 30.0%
TATTCTTTATGACAGTGACT+GGG + chr5_4:11437954-11437973 Msa0837460:CDS 30.0%
! TAATTTGTACAACATGTGAC+TGG + chr5_4:11438194-11438213 Msa0837460:intron 30.0%
AATTTGTACAACATGTGACT+GGG + chr5_4:11438195-11438214 Msa0837460:intron 30.0%
CATAAAAAACACAGAAGAGA+AGG - chr5_4:11438401-11438420 None:intergenic 30.0%
AACAGTTAGGCAAAATTTCT+AGG - chr5_4:11438512-11438531 None:intergenic 30.0%
! GAAATTTTGCCTAACTGTTT+TGG + chr5_4:11438513-11438532 Msa0837460:intron 30.0%
TTTCAGTAAATCTTGGAGTT+AGG - chr5_4:11438713-11438732 None:intergenic 30.0%
CTTCGTATTTCAGTAAATCT+TGG - chr5_4:11438720-11438739 None:intergenic 30.0%
AGATTTACTGAAATACGAAG+AGG + chr5_4:11438720-11438739 Msa0837460:CDS 30.0%
AACTTATGTTAGTGCAACTT+TGG - chr5_4:11438751-11438770 None:intergenic 30.0%
ACAAACTCCATGTTAAAACA+TGG - chr5_4:11438810-11438829 None:intergenic 30.0%
!! TGTGCCTTATTTGTGATATT+AGG + chr5_4:11438827-11438846 Msa0837460:intron 30.0%
! ATATTAGGAAGAGGATGTTT+TGG + chr5_4:11438842-11438861 Msa0837460:intron 30.0%
! GTTAGTACCTTTTCTCTTAA+AGG + chr5_4:11438993-11439012 Msa0837460:CDS 30.0%
AAAAAGTTCTGTTGCAGATT+GGG - chr5_4:11439086-11439105 None:intergenic 30.0%
ATTACATCTCAAACCACAAA+AGG - chr5_4:11439135-11439154 None:intergenic 30.0%
!!! CTTGTGGTCATGTTTTTTTT+TGG + chr5_4:11439270-11439289 Msa0837460:three_prime_UTR 30.0%
ACAAGCAAATATGAATTGAG+TGG - chr5_4:11439324-11439343 None:intergenic 30.0%
!!! AGGCTATGTTTTGATTTTTG+TGG + chr5_4:11439395-11439414 Msa0837460:three_prime_UTR 30.0%
ATGATGATTTACTAAACCAG+CGG - chr5_4:11439421-11439440 None:intergenic 30.0%
TGTTAATAGTGTTGTGTGAG+TGG - chr5_4:11433099-11433118 None:intergenic 35.0%
! ATTCTGGAAGAGAAGATGAA+AGG - chr5_4:11433142-11433161 None:intergenic 35.0%
TGGGAATAATGTGTATGTGA+AGG + chr5_4:11433474-11433493 Msa0837460:intron 35.0%
TAATGTGTATGTGAAGGAAG+TGG + chr5_4:11433480-11433499 Msa0837460:intron 35.0%
! ACTCTACTCAGAGTTTCTTT+TGG + chr5_4:11433687-11433706 Msa0837460:CDS 35.0%
AAGCTCTCAGAGAAACTATT+AGG + chr5_4:11433817-11433836 Msa0837460:intron 35.0%
AGTTTACTCTCTTCTTCATC+CGG - chr5_4:11434113-11434132 None:intergenic 35.0%
TGCAAGCATAACAAATTCAC+AGG - chr5_4:11434381-11434400 None:intergenic 35.0%
TTTCTCAGTTCTTTCTTCCT+CGG - chr5_4:11434535-11434554 None:intergenic 35.0%
! TTAAGTGGTTGATTTCCTTG+TGG + chr5_4:11434619-11434638 Msa0837460:CDS 35.0%
TTGATTTCCTTGTGGCAAAA+TGG + chr5_4:11434627-11434646 Msa0837460:CDS 35.0%
! ATTCAATCCATTTTGCCACA+AGG - chr5_4:11434637-11434656 None:intergenic 35.0%
!! TTGTGGCAAAATGGATTGAA+TGG + chr5_4:11434636-11434655 Msa0837460:CDS 35.0%
!! TGTGGCAAAATGGATTGAAT+GGG + chr5_4:11434637-11434656 Msa0837460:CDS 35.0%
GGAAGACAATCCAAACAATT+GGG + chr5_4:11434685-11434704 Msa0837460:CDS 35.0%
GAGAAAGAAACCCAATTGTT+TGG - chr5_4:11434698-11434717 None:intergenic 35.0%
CTAAAATCGAAAGGATTGGA+TGG + chr5_4:11434720-11434739 Msa0837460:CDS 35.0%
! CTCTCTGATATTTGTTACCA+TGG - chr5_4:11434937-11434956 None:intergenic 35.0%
ATCAGAGAGATGAAATCAGA+AGG + chr5_4:11434948-11434967 Msa0837460:CDS 35.0%
AAACATATGCCTAGAACAGT+TGG + chr5_4:11434971-11434990 Msa0837460:CDS 35.0%
! AGTGTTTAAGGTCATACAGT+TGG + chr5_4:11435050-11435069 Msa0837460:CDS 35.0%
!! GAAGTATCTTGTTGTTGATG+AGG + chr5_4:11435072-11435091 Msa0837460:CDS 35.0%
CTCTTGAAGAATTTGAGTCA+TGG + chr5_4:11435363-11435382 Msa0837460:CDS 35.0%
! GGTTAGTGTTCTTTTCCTAT+TGG + chr5_4:11435384-11435403 Msa0837460:intron 35.0%
ATCTTGCCGAACAATATAGT+AGG - chr5_4:11435499-11435518 None:intergenic 35.0%
CATATCAAAGGGAAGCTATT+TGG + chr5_4:11435655-11435674 Msa0837460:intron 35.0%
! TGTTAGAAGAGCACATAACA+AGG - chr5_4:11435902-11435921 None:intergenic 35.0%
TGTTATGTGCTCTTCTAACA+TGG + chr5_4:11435902-11435921 Msa0837460:intron 35.0%
! TTTTGTAGGTTTAACCTGTC+GGG + chr5_4:11436103-11436122 Msa0837460:intron 35.0%
CCTAAGAATTGAATGAAGCT+TGG - chr5_4:11436277-11436296 None:intergenic 35.0%
CCAAGCTTCATTCAATTCTT+AGG + chr5_4:11436274-11436293 Msa0837460:CDS 35.0%
!!! ACAATGATCTCTTTTTTCCG+TGG - chr5_4:11436345-11436364 None:intergenic 35.0%
TGAGACACTGGAGAAATATT+TGG + chr5_4:11436416-11436435 Msa0837460:CDS 35.0%
! CATCAAAGACTGATTCTAAG+AGG - chr5_4:11436648-11436667 None:intergenic 35.0%
CTCTTAGAATCAGTCTTTGA+TGG + chr5_4:11436646-11436665 Msa0837460:CDS 35.0%
TCATGTAAGTAATGTCCGAT+TGG + chr5_4:11436670-11436689 Msa0837460:intron 35.0%
!! AGACTGATTCTAAGACTAAG+AGG - chr5_4:11436753-11436772 None:intergenic 35.0%
GTCTTAGAATCAGTCTTTGA+TGG + chr5_4:11436757-11436776 Msa0837460:intron 35.0%
TCATGTAAGTAATGTCCGAT+TGG + chr5_4:11436670-11436689 Msa0837460:intron 35.0%
TCAATTATCTCATTCACAGG+AGG - chr5_4:11436877-11436896 None:intergenic 35.0%
CCACAAAAAAGGAAGTAGAA+AGG - chr5_4:11436990-11437009 None:intergenic 35.0%
!!! CCTTTCTACTTCCTTTTTTG+TGG + chr5_4:11436987-11437006 Msa0837460:intron 35.0%
AACCTGATAGCAATTAGCAA+AGG - chr5_4:11437038-11437057 None:intergenic 35.0%
GCAACTTGTAAACATGCTTA+AGG - chr5_4:11437438-11437457 None:intergenic 35.0%
! AAAATCTCCTCTTAGCCTTT+AGG - chr5_4:11437512-11437531 None:intergenic 35.0%
! AACTATCACGCATAGCTTTA+AGG - chr5_4:11437559-11437578 None:intergenic 35.0%
CACTAATGCTTCAGTTTCAA+TGG - chr5_4:11437616-11437635 None:intergenic 35.0%
! CATTGAAACTGAAGCATTAG+TGG + chr5_4:11437614-11437633 Msa0837460:intron 35.0%
CCATGGTTTAAACAGAGATA+TGG - chr5_4:11437707-11437726 None:intergenic 35.0%
CCATATCTCTGTTTAAACCA+TGG + chr5_4:11437704-11437723 Msa0837460:intron 35.0%
TCACATGTCACAAATTGAAG+AGG + chr5_4:11437788-11437807 Msa0837460:intron 35.0%
AATCTTTCTTCTTTCCACCA+GGG + chr5_4:11437891-11437910 Msa0837460:CDS 35.0%
GTATTCTTTATGACAGTGAC+TGG + chr5_4:11437953-11437972 Msa0837460:CDS 35.0%
!!! ATGTTTTGACTTTTTCCTGC+TGG + chr5_4:11437978-11437997 Msa0837460:intron 35.0%
!!! TGTTTTGACTTTTTCCTGCT+GGG + chr5_4:11437979-11437998 Msa0837460:intron 35.0%
GTAAATCCATTTGAGGATTC+TGG - chr5_4:11438063-11438082 None:intergenic 35.0%
! GAATCCTCAAATGGATTTAC+AGG + chr5_4:11438063-11438082 Msa0837460:intron 35.0%
ATGGATAGATGTCACAGAAT+CGG + chr5_4:11438088-11438107 Msa0837460:CDS 35.0%
ATTTGTACAACATGTGACTG+GGG + chr5_4:11438196-11438215 Msa0837460:intron 35.0%
! ACATGATATGGTCCTTTTAC+AGG + chr5_4:11438238-11438257 Msa0837460:intron 35.0%
! CATGATATGGTCCTTTTACA+GGG + chr5_4:11438239-11438258 Msa0837460:intron 35.0%
AGAGAAAGGACAATTTCATC+AGG + chr5_4:11438313-11438332 Msa0837460:CDS 35.0%
AACCTCCATTTCATCCATAA+GGG - chr5_4:11438354-11438373 None:intergenic 35.0%
AAACCTCCATTTCATCCATA+AGG - chr5_4:11438355-11438374 None:intergenic 35.0%
AAAATGTTCCAACATGCCAT+TGG + chr5_4:11438435-11438454 Msa0837460:intron 35.0%
!! TTTGCCTAACTGTTTTGGAT+TGG + chr5_4:11438518-11438537 Msa0837460:intron 35.0%
TAAGCCAATCCAAAACAGTT+AGG - chr5_4:11438525-11438544 None:intergenic 35.0%
! ATTGGCTTAACTAGATGAAC+AGG + chr5_4:11438536-11438555 Msa0837460:intron 35.0%
! AAATTCTATGGAGGATTAGC+TGG + chr5_4:11438624-11438643 Msa0837460:intron 35.0%
AGATATTAGTGATGAAGACC+TGG + chr5_4:11438911-11438930 Msa0837460:CDS 35.0%
CAAAAAGTTCTGTTGCAGAT+TGG - chr5_4:11439087-11439106 None:intergenic 35.0%
! ATCTGCAACAGAACTTTTTG+AGG + chr5_4:11439087-11439106 Msa0837460:three_prime_UTR 35.0%
! TCTGCAACAGAACTTTTTGA+GGG + chr5_4:11439088-11439107 Msa0837460:three_prime_UTR 35.0%
TGTAGAAATGAAGCAACTTG+TGG + chr5_4:11439254-11439273 Msa0837460:three_prime_UTR 35.0%
!! CTTAGTTTGTTGGATATGGT+GGG + chr5_4:11439357-11439376 Msa0837460:three_prime_UTR 35.0%
GTCGTTCTTCACATTGTTCT+TGG - chr5_4:11433299-11433318 None:intergenic 40.0%
!! TCTTCTTCTAGGACTGAAGT+TGG - chr5_4:11433340-11433359 None:intergenic 40.0%
AACTTCAGTCCTAGAAGAAG+AGG + chr5_4:11433339-11433358 Msa0837460:CDS 40.0%
TCACAGATACCTCTTCTTCT+AGG - chr5_4:11433351-11433370 None:intergenic 40.0%
ATCGCTTGTACCGAAAACAA+TGG + chr5_4:11433543-11433562 Msa0837460:CDS 40.0%
! TCTTCCTCAGCCATTGTTTT+CGG - chr5_4:11433556-11433575 None:intergenic 40.0%
CTTGCATTTCCAGAAACACA+TGG - chr5_4:11433911-11433930 None:intergenic 40.0%
!! CATGTGTTTCTGGAAATGCA+AGG + chr5_4:11433909-11433928 Msa0837460:intron 40.0%
AACAGTGAAAAACGAGACAC+TGG - chr5_4:11433955-11433974 None:intergenic 40.0%
!! ATCATTGTTTTGCTAGGCTG+CGG + chr5_4:11434073-11434092 Msa0837460:intron 40.0%
GGATGAAGAAGAGAGTAAAC+TGG + chr5_4:11434112-11434131 Msa0837460:CDS 40.0%
! CTGCCTTTCTTTTTGATCCA+CGG - chr5_4:11434154-11434173 None:intergenic 40.0%
ACTCACAGTATTGCATTGTG+AGG - chr5_4:11434177-11434196 None:intergenic 40.0%
AAATGTGAAGACTGAGGATG+TGG + chr5_4:11434503-11434522 Msa0837460:CDS 40.0%
AAAGAACTGAGAAAGAGCAG+AGG + chr5_4:11434541-11434560 Msa0837460:CDS 40.0%
AAGAACTGAGAAAGAGCAGA+GGG + chr5_4:11434542-11434561 Msa0837460:CDS 40.0%
!! ATCAACTGAAGGGTGTTAAG+TGG + chr5_4:11434604-11434623 Msa0837460:CDS 40.0%
TGGGATTCTTGCTGATCAAA+TGG + chr5_4:11434656-11434675 Msa0837460:CDS 40.0%
GGGATTCTTGCTGATCAAAT+GGG + chr5_4:11434657-11434676 Msa0837460:CDS 40.0%
TTGCTGATCAAATGGGTCTT+GGG + chr5_4:11434664-11434683 Msa0837460:CDS 40.0%
GGGAAGACAATCCAAACAAT+TGG + chr5_4:11434684-11434703 Msa0837460:CDS 40.0%
CTCATTCATCCAATTGGAGA+GGG - chr5_4:11434775-11434794 None:intergenic 40.0%
TCTCATTCATCCAATTGGAG+AGG - chr5_4:11434776-11434795 None:intergenic 40.0%
TACCATGGTAGATAACAGCA+GGG - chr5_4:11434922-11434941 None:intergenic 40.0%
TTACCATGGTAGATAACAGC+AGG - chr5_4:11434923-11434942 None:intergenic 40.0%
! AATTTTGGGCCAACTGTTCT+AGG - chr5_4:11434983-11435002 None:intergenic 40.0%
ATGCCAACTGCAAATTAGTG+AGG + chr5_4:11435225-11435244 Msa0837460:CDS 40.0%
! CATCCTCACTAATTTGCAGT+TGG - chr5_4:11435231-11435250 None:intergenic 40.0%
ATAGCTCAGCCAAGTTATTC+TGG - chr5_4:11435304-11435323 None:intergenic 40.0%
AGAATAACTTGGCTGAGCTA+TGG + chr5_4:11435303-11435322 Msa0837460:CDS 40.0%
CGCCACAGATTCAAATGAAA+AGG - chr5_4:11435789-11435808 None:intergenic 40.0%
AGAATTGATACAATGGGGGA+GGG - chr5_4:11435835-11435854 None:intergenic 40.0%
AAGAATTGATACAATGGGGG+AGG - chr5_4:11435836-11435855 None:intergenic 40.0%
AGGTCAGTTTCTTTCAAACC+TGG + chr5_4:11435864-11435883 Msa0837460:intron 40.0%
TGCTCTTCTAACATGGTCAA+TGG + chr5_4:11435909-11435928 Msa0837460:intron 40.0%
ACATGGTCAATGGTTGTTCA+TGG + chr5_4:11435919-11435938 Msa0837460:intron 40.0%
TTCATCCTACGCAACAGAAA+TGG - chr5_4:11436300-11436319 None:intergenic 40.0%
ATGTTGAGCTAATGTTGCCA+CGG + chr5_4:11436325-11436344 Msa0837460:CDS 40.0%
TTGGACAAGAAACGATCAGT+TGG + chr5_4:11436435-11436454 Msa0837460:CDS 40.0%
! AAGACTGATTCTAAGAGGTC+AGG - chr5_4:11436643-11436662 None:intergenic 40.0%
GTAAGTAATGTCCGATTGGA+TGG + chr5_4:11436674-11436693 Msa0837460:intron 40.0%
!! GATTCTAAGACTAAGAGGTC+AGG - chr5_4:11436748-11436767 None:intergenic 40.0%
GTAAGTAATGTCCGATTGGA+TGG + chr5_4:11436674-11436693 Msa0837460:intron 40.0%
TGCCTTTGCTAATTGCTATC+AGG + chr5_4:11437033-11437052 Msa0837460:intron 40.0%
AAAAGGGTTTCGAAGTTTGC+AGG + chr5_4:11437113-11437132 Msa0837460:CDS 40.0%
TTCGAAGTTTGCAGGATTGA+TGG + chr5_4:11437121-11437140 Msa0837460:CDS 40.0%
! AGTTTGCAGGATTGATGGTT+CGG + chr5_4:11437126-11437145 Msa0837460:CDS 40.0%
TGAAGCTGGATGATAGGAAA+CGG + chr5_4:11437149-11437168 Msa0837460:CDS 40.0%
GAAGCTTGTACAACACCTAA+AGG + chr5_4:11437494-11437513 Msa0837460:intron 40.0%
TACAACACCTAAAGGCTAAG+AGG + chr5_4:11437502-11437521 Msa0837460:intron 40.0%
! ACTGAAGCATTAGTGGCAAT+TGG + chr5_4:11437621-11437640 Msa0837460:intron 40.0%
AGTGTTGCAACACAAATCCA+TGG - chr5_4:11437724-11437743 None:intergenic 40.0%
TGGTTGTATCATTGAAGTCC+TGG - chr5_4:11437861-11437880 None:intergenic 40.0%
AAGAAAGATTCTGCAGTTGC+TGG - chr5_4:11437881-11437900 None:intergenic 40.0%
GAATCTTTCTTCTTTCCACC+AGG + chr5_4:11437890-11437909 Msa0837460:CDS 40.0%
TGTACTCCAGAATCCTCAAA+TGG + chr5_4:11438054-11438073 Msa0837460:intron 40.0%
ATGGCCTGTAAATCCATTTG+AGG - chr5_4:11438070-11438089 None:intergenic 40.0%
! TCAAATGGATTTACAGGCCA+TGG + chr5_4:11438069-11438088 Msa0837460:CDS 40.0%
GATTCTGTGACATCTATCCA+TGG - chr5_4:11438089-11438108 None:intergenic 40.0%
CAAAGCCTGTTCATGTTTAC+AGG + chr5_4:11438116-11438135 Msa0837460:CDS 40.0%
! AATCAGTAGAGGTACGTACT+TGG + chr5_4:11438152-11438171 Msa0837460:intron 40.0%
TTTGTACAACATGTGACTGG+GGG + chr5_4:11438197-11438216 Msa0837460:intron 40.0%
! ATATGGTCCTTTTACAGGGT+CGG + chr5_4:11438243-11438262 Msa0837460:intron 40.0%
TCCATTTCATCCATAAGGGA+AGG - chr5_4:11438350-11438369 None:intergenic 40.0%
TTCCCTTATGGATGAAATGG+AGG + chr5_4:11438349-11438368 Msa0837460:CDS 40.0%
! CTGTATCATTTTGTCCTCAG+CGG - chr5_4:11438889-11438908 None:intergenic 40.0%
AATTGTCAGAGGTAATGTCC+TGG + chr5_4:11439192-11439211 Msa0837460:three_prime_UTR 40.0%
TACAAAAATGAATGCCCTCC+AGG - chr5_4:11439213-11439232 None:intergenic 40.0%
! CTACATCTAGTTCCGTTAGT+AGG - chr5_4:11439239-11439258 None:intergenic 40.0%
CTATTCACAAATCCAGTGTG+TGG + chr5_4:11439295-11439314 Msa0837460:three_prime_UTR 40.0%
!! TAAGCTGCTCCTTAGTTTGT+TGG + chr5_4:11439347-11439366 Msa0837460:three_prime_UTR 40.0%
!! GCTCCTTAGTTTGTTGGATA+TGG + chr5_4:11439353-11439372 Msa0837460:three_prime_UTR 40.0%
CCACCATATCCAACAAACTA+AGG - chr5_4:11439359-11439378 None:intergenic 40.0%
!! CCTTAGTTTGTTGGATATGG+TGG + chr5_4:11439356-11439375 Msa0837460:three_prime_UTR 40.0%
TGTGTATGTGAAGGAAGTGG+AGG + chr5_4:11433483-11433502 Msa0837460:intron 45.0%
GAAGGAAGTGGAGGTGAAAT+CGG + chr5_4:11433492-11433511 Msa0837460:intron 45.0%
TGTACCGAAAACAATGGCTG+AGG + chr5_4:11433549-11433568 Msa0837460:CDS 45.0%
GTGAAAAACGAGACACTGGA+AGG - chr5_4:11433951-11433970 None:intergenic 45.0%
CAGAAAGTAAAGGGGTCCTT+AGG + chr5_4:11434024-11434043 Msa0837460:intron 45.0%
! TAAAGGGGTCCTTAGGTTGT+TGG + chr5_4:11434031-11434050 Msa0837460:intron 45.0%
!! TCATTGTTTTGCTAGGCTGC+GGG + chr5_4:11434074-11434093 Msa0837460:intron 45.0%
GCTTCAGGGAAAAGCCAAAA+AGG + chr5_4:11434449-11434468 Msa0837460:intron 45.0%
! CATGGCTTCAACTGCCTTTT+TGG - chr5_4:11434466-11434485 None:intergenic 45.0%
GAGCTGATGCCTTTACTAAC+TGG + chr5_4:11434564-11434583 Msa0837460:CDS 45.0%
CTGATGCCTTTACTAACTGG+TGG + chr5_4:11434567-11434586 Msa0837460:CDS 45.0%
CTTGCTGATCAAATGGGTCT+TGG + chr5_4:11434663-11434682 Msa0837460:CDS 45.0%
!! CAATTGGAGAGGGTTGATAG+AGG - chr5_4:11434765-11434784 None:intergenic 45.0%
CTCTATCAACCCTCTCCAAT+TGG + chr5_4:11434763-11434782 Msa0837460:CDS 45.0%
! TTTTGTAACCTCAGGGACAC+AGG + chr5_4:11435195-11435214 Msa0837460:intron 45.0%
TACACCGCTCCAGAATAACT+TGG + chr5_4:11435292-11435311 Msa0837460:CDS 45.0%
! TCAGCCAAGTTATTCTGGAG+CGG - chr5_4:11435299-11435318 None:intergenic 45.0%
AATTGATACAATGGGGGAGG+GGG - chr5_4:11435833-11435852 None:intergenic 45.0%
GAATTGATACAATGGGGGAG+GGG - chr5_4:11435834-11435853 None:intergenic 45.0%
ACAAGGTACAAGCAACAACC+AGG - chr5_4:11435953-11435972 None:intergenic 45.0%
ACAAGGTACAAGCAACAACC+AGG + chr5_4:11435953-11435972 Msa0837460:intron 45.0%
TGGAGCAACAATGGAAGAGT+TGG + chr5_4:11436138-11436157 Msa0837460:CDS 45.0%
GCTAAATGACTGTCTCATGC+AGG + chr5_4:11436245-11436264 Msa0837460:intron 45.0%
TTAGGCCATTTCTGTTGCGT+AGG + chr5_4:11436292-11436311 Msa0837460:CDS 45.0%
CTTCTGATGCTCAGTCATGT+TGG - chr5_4:11436373-11436392 None:intergenic 45.0%
TGAGCATCAGAAGAACTTGC+AGG + chr5_4:11436380-11436399 Msa0837460:CDS 45.0%
! CTGATTCTAAGAGGTCAGGA+TGG - chr5_4:11436639-11436658 None:intergenic 45.0%
CTAAGACTAAGAGGTCAGGA+TGG - chr5_4:11436744-11436763 None:intergenic 45.0%
GCTATTTGCACGGAATCACA+AGG + chr5_4:11436939-11436958 Msa0837460:CDS 45.0%
TAGCAGCTTGGCCACAAAAA+AGG - chr5_4:11437001-11437020 None:intergenic 45.0%
! AGGTTCTGATCTTCAGTCAG+TGG + chr5_4:11437053-11437072 Msa0837460:intron 45.0%
! GAAGCATTAGTGGCAATTGG+CGG + chr5_4:11437624-11437643 Msa0837460:intron 45.0%
AAGCATTAGTGGCAATTGGC+GGG + chr5_4:11437625-11437644 Msa0837460:intron 45.0%
TCAATAGATAAACGCCCAGC+AGG - chr5_4:11437996-11438015 None:intergenic 45.0%
CTGGAGTACAACGAAGTCAT+AGG - chr5_4:11438044-11438063 None:intergenic 45.0%
TCAACATCCGACCCTGTAAA+AGG - chr5_4:11438253-11438272 None:intergenic 45.0%
! CAAGTTGAAGCTTGAGCATG+TGG + chr5_4:11438286-11438305 Msa0837460:CDS 45.0%
GAGCATGTGGTGATAGAGAA+AGG + chr5_4:11438299-11438318 Msa0837460:CDS 45.0%
GCCTTCCCTTATGGATGAAA+TGG + chr5_4:11438346-11438365 Msa0837460:CDS 45.0%
ATGTTCCAACATGCCATTGG+TGG + chr5_4:11438438-11438457 Msa0837460:intron 45.0%
TGTTCCAACATGCCATTGGT+GGG + chr5_4:11438439-11438458 Msa0837460:intron 45.0%
AACAACACTTTCCCCACCAA+TGG - chr5_4:11438454-11438473 None:intergenic 45.0%
!!! TGGTGGGGAAAGTGTTGTTT+TGG + chr5_4:11438455-11438474 Msa0837460:intron 45.0%
!! CTATGGAGGATTAGCTGGTA+TGG + chr5_4:11438629-11438648 Msa0837460:intron 45.0%
! ACCTTTTCTCTTAAAGGGCC+TGG + chr5_4:11438999-11439018 Msa0837460:CDS 45.0%
! TCCAGGCCCTTTAAGAGAAA+AGG - chr5_4:11439003-11439022 None:intergenic 45.0%
TTTCTCTTAAAGGGCCTGGA+TGG + chr5_4:11439003-11439022 Msa0837460:CDS 45.0%
TTCTCTTAAAGGGCCTGGAT+GGG + chr5_4:11439004-11439023 Msa0837460:CDS 45.0%
GGGAAATTAGCTGTTGAGAG+TGG - chr5_4:11439066-11439085 None:intergenic 45.0%
!! CAACAGAACTTTTTGAGGGC+TGG + chr5_4:11439092-11439111 Msa0837460:three_prime_UTR 45.0%
CCTCTGACAATTGACATCAC+TGG - chr5_4:11439184-11439203 None:intergenic 45.0%
CCAGTGATGTCAATTGTCAG+AGG + chr5_4:11439181-11439200 Msa0837460:three_prime_UTR 45.0%
ATTGAGTGGATACCACACAC+TGG - chr5_4:11439310-11439329 None:intergenic 45.0%
!! GTGGGACTGCATTGATTCAA+AGG + chr5_4:11439375-11439394 Msa0837460:three_prime_UTR 45.0%
!!! GTTTTGATTTTTGTGGCCGC+TGG + chr5_4:11439402-11439421 Msa0837460:three_prime_UTR 45.0%
!!! TTATTTTTTTTATCATTTTT+AGG + chr5_4:11433257-11433276 Msa0837460:intron 5.0%
!!! TATTTTTTTTATCATTTTTA+GGG + chr5_4:11433258-11433277 Msa0837460:intron 5.0%
!!! TATTGTATTTTTATTTATTT+AGG + chr5_4:11438674-11438693 Msa0837460:intron 5.0%
!!! ATTGTATTTTTATTTATTTA+GGG + chr5_4:11438675-11438694 Msa0837460:intron 5.0%
!! GAAGTTGGTGATTCCACTGC+AGG - chr5_4:11433325-11433344 None:intergenic 50.0%
GTTGCTGAAAGCTCGTGCAA+AGG + chr5_4:11433582-11433601 Msa0837460:CDS 50.0%
AGCTCGTGCAAAGGAAGAAG+AGG + chr5_4:11433591-11433610 Msa0837460:CDS 50.0%
TGCGGGTGAACAAGAGAAAC+CGG + chr5_4:11434091-11434110 Msa0837460:CDS 50.0%
GTTGCAAAAAAGAAGGGCCG+TGG + chr5_4:11434134-11434153 Msa0837460:CDS 50.0%
GGGCCGTGGATCAAAAAGAA+AGG + chr5_4:11434148-11434167 Msa0837460:CDS 50.0%
TGAGGATGTGGATTTGACCG+AGG + chr5_4:11434515-11434534 Msa0837460:CDS 50.0%
! TAGATAACAGCAGGGAGCGT+TGG - chr5_4:11434914-11434933 None:intergenic 50.0%
CTCCCTGCTGTTATCTACCA+TGG + chr5_4:11434917-11434936 Msa0837460:CDS 50.0%
!! TTTTTCAGCCTGTGTCCCTG+AGG - chr5_4:11435206-11435225 None:intergenic 50.0%
ATTGATACAATGGGGGAGGG+GGG - chr5_4:11435832-11435851 None:intergenic 50.0%
GAGCACTACTGGAGCAACAA+TGG + chr5_4:11436129-11436148 Msa0837460:CDS 50.0%
TGACTGTCTCATGCAGGTTG+TGG + chr5_4:11436251-11436270 Msa0837460:intron 50.0%
!! GTACTGTGCCGATTTGATGC+AGG + chr5_4:11436559-11436578 Msa0837460:intron 50.0%
GAGCACGTCCTGCATCAAAT+CGG - chr5_4:11436570-11436589 None:intergenic 50.0%
TCAATTGCTCGACCGATTGC+TGG + chr5_4:11436912-11436931 Msa0837460:CDS 50.0%
CAAATAGCCGCTCCAGCAAT+CGG - chr5_4:11436927-11436946 None:intergenic 50.0%
AGTGCACATGAGTAGCAGCT+TGG - chr5_4:11437013-11437032 None:intergenic 50.0%
!! GATTGATGGTTCGGTGAAGC+TGG + chr5_4:11437135-11437154 Msa0837460:CDS 50.0%
! GTTCGGTGAAGCTGGATGAT+AGG + chr5_4:11437143-11437162 Msa0837460:CDS 50.0%
AGCATTAGTGGCAATTGGCG+GGG + chr5_4:11437626-11437645 Msa0837460:intron 50.0%
TTTCTTCTTTCCACCAGGGC+TGG + chr5_4:11437895-11437914 Msa0837460:CDS 50.0%
TACAAGTGTCAGCTGCAGTG+AGG - chr5_4:11437936-11437955 None:intergenic 50.0%
GCGAGCCTGTAAACATGAAC+AGG - chr5_4:11438124-11438143 None:intergenic 50.0%
CGCTACTGCACAATCAGTAG+AGG + chr5_4:11438141-11438160 Msa0837460:CDS 50.0%
GTTCCAACATGCCATTGGTG+GGG + chr5_4:11438440-11438459 Msa0837460:intron 50.0%
TTTCCCCACCAATGGCATGT+TGG - chr5_4:11438446-11438465 None:intergenic 50.0%
TCGAGATGAAGAAACCGCTG+AGG + chr5_4:11438872-11438891 Msa0837460:CDS 50.0%
TGAAGACCTGGAGAAGCTCT+TGG + chr5_4:11438923-11438942 Msa0837460:CDS 50.0%
TGTCAGAGGTAATGTCCTGG+AGG + chr5_4:11439195-11439214 Msa0837460:three_prime_UTR 50.0%
GTCAGAGGTAATGTCCTGGA+GGG + chr5_4:11439196-11439215 Msa0837460:three_prime_UTR 50.0%
GAAGAACGACGATCCTGCAG+TGG + chr5_4:11433309-11433328 Msa0837460:CDS 55.0%
GGAAGTGGAGGTGAAATCGG+AGG + chr5_4:11433495-11433514 Msa0837460:intron 55.0%
GGAGGTGAAATCGGAGGAAG+AGG + chr5_4:11433501-11433520 Msa0837460:CDS 55.0%
CAGTAGTGCTCTTTCCCGAC+AGG - chr5_4:11436120-11436139 None:intergenic 55.0%
!! CTGTCGGGAAAGAGCACTAC+TGG + chr5_4:11436118-11436137 Msa0837460:CDS 55.0%
GCGCTCACTGTCAGCTATGT+GGG + chr5_4:11436516-11436535 Msa0837460:intron 55.0%
TGCTGGAGCGGCTATTTGCA+CGG + chr5_4:11436929-11436948 Msa0837460:CDS 55.0%
GCTGGATGATAGGAAACGGC+AGG + chr5_4:11437153-11437172 Msa0837460:CDS 55.0%
GCATTAGTGGCAATTGGCGG+GGG + chr5_4:11437627-11437646 Msa0837460:intron 55.0%
CATTAGTGGCAATTGGCGGG+GGG + chr5_4:11437628-11437647 Msa0837460:intron 55.0%
GAAGTCCTGGATCTGCTCGT+TGG - chr5_4:11437848-11437867 None:intergenic 55.0%
! TTCTTTCCACCAGGGCTGGT+GGG + chr5_4:11437899-11437918 Msa0837460:CDS 55.0%
GCGCACAAAGCCTTCCCTTA+TGG + chr5_4:11438337-11438356 Msa0837460:CDS 55.0%
TGCGATCCAAGAGCTTCTCC+AGG - chr5_4:11438932-11438951 None:intergenic 55.0%
TAAAGGGCCTGGATGGGAAG+TGG + chr5_4:11439010-11439029 Msa0837460:CDS 55.0%
! GGAAGTGGTGATGCCAACTG+CGG + chr5_4:11439025-11439044 Msa0837460:CDS 55.0%
CGCGCTCACTGTCAGCTATG+TGG + chr5_4:11436515-11436534 Msa0837460:intron 60.0%
TGCTCGACCGATTGCTGGAG+CGG + chr5_4:11436917-11436936 Msa0837460:CDS 60.0%
TTCCGCCAACGAGCAGATCC+AGG + chr5_4:11437840-11437859 Msa0837460:intron 60.0%
GTCCTGGATCTGCTCGTTGG+CGG - chr5_4:11437845-11437864 None:intergenic 60.0%
CTTCTTTCCACCAGGGCTGG+TGG + chr5_4:11437898-11437917 Msa0837460:CDS 60.0%
TATTCCCAACCCACCAGCCC+TGG - chr5_4:11437911-11437930 None:intergenic 60.0%
GGCATCACCACTTCCCATCC+AGG - chr5_4:11439020-11439039 None:intergenic 60.0%
! TGGTGATGCCAACTGCGGCA+GGG + chr5_4:11439030-11439049 Msa0837460:CDS 60.0%
AGGGGGGAGGATTGAGGGTG+GGG - chr5_4:11435816-11435835 None:intergenic 65.0%
GAGGGGGGAGGATTGAGGGT+GGG - chr5_4:11435817-11435836 None:intergenic 65.0%
GATACAATGGGGGAGGGGGG+AGG - chr5_4:11435829-11435848 None:intergenic 65.0%
! TTCCACCAGGGCTGGTGGGT+TGG + chr5_4:11437903-11437922 Msa0837460:CDS 65.0%
!! TCCACCAGGGCTGGTGGGTT+GGG + chr5_4:11437904-11437923 Msa0837460:CDS 65.0%
! GTGGTGATGCCAACTGCGGC+AGG + chr5_4:11439029-11439048 Msa0837460:CDS 65.0%
GGTGATGCCAACTGCGGCAG+GGG + chr5_4:11439031-11439050 Msa0837460:CDS 65.0%
GTGATGCCAACTGCGGCAGG+GGG + chr5_4:11439032-11439051 Msa0837460:CDS 65.0%
GGGGAGGATTGAGGGTGGGG+GGG - chr5_4:11435813-11435832 None:intergenic 70.0%
GGGGGAGGATTGAGGGTGGG+GGG - chr5_4:11435814-11435833 None:intergenic 70.0%
GGGGGGAGGATTGAGGGTGG+GGG - chr5_4:11435815-11435834 None:intergenic 70.0%
GGAGGGGGGAGGATTGAGGG+TGG - chr5_4:11435818-11435837 None:intergenic 70.0%
GGGGGAGGGGGGAGGATTGA+GGG - chr5_4:11435821-11435840 None:intergenic 70.0%
TGGGGGAGGGGGGAGGATTG+AGG - chr5_4:11435822-11435841 None:intergenic 70.0%
TCCCAACCCACCAGCCCTGG+TGG - chr5_4:11437908-11437927 None:intergenic 70.0%
AGCATGCCCCCTGCCGCAGT+TGG - chr5_4:11439041-11439060 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 11433084 11439440 11433084 ID=Msa0837460;Name=Msa0837460
chr5_4 mRNA 11433084 11439440 11433084 ID=Msa0837460-mRNA-1;Parent=Msa0837460;Name=Msa0837460-mRNA-1;_AED=0.11;_eAED=0.11;_QI=105|0.87|0.94|0.94|0.93|0.88|17|361|769
chr5_4 exon 11433084 11433178 11433084 ID=Msa0837460-mRNA-1:exon:4985;Parent=Msa0837460-mRNA-1
chr5_4 exon 11433279 11433360 11433279 ID=Msa0837460-mRNA-1:exon:4986;Parent=Msa0837460-mRNA-1
chr5_4 exon 11433496 11433732 11433496 ID=Msa0837460-mRNA-1:exon:4987;Parent=Msa0837460-mRNA-1
chr5_4 exon 11434089 11434190 11434089 ID=Msa0837460-mRNA-1:exon:4988;Parent=Msa0837460-mRNA-1
chr5_4 exon 11434456 11434802 11434456 ID=Msa0837460-mRNA-1:exon:4989;Parent=Msa0837460-mRNA-1
chr5_4 exon 11434904 11435093 11434904 ID=Msa0837460-mRNA-1:exon:4990;Parent=Msa0837460-mRNA-1
chr5_4 exon 11435209 11435384 11435209 ID=Msa0837460-mRNA-1:exon:4991;Parent=Msa0837460-mRNA-1
chr5_4 exon 11436111 11436180 11436111 ID=Msa0837460-mRNA-1:exon:4992;Parent=Msa0837460-mRNA-1
chr5_4 exon 11436267 11436456 11436267 ID=Msa0837460-mRNA-1:exon:4993;Parent=Msa0837460-mRNA-1
chr5_4 exon 11436581 11436673 11436581 ID=Msa0837460-mRNA-1:exon:4994;Parent=Msa0837460-mRNA-1
chr5_4 exon 11436866 11436960 11436866 ID=Msa0837460-mRNA-1:exon:4995;Parent=Msa0837460-mRNA-1
chr5_4 exon 11437055 11437174 11437055 ID=Msa0837460-mRNA-1:exon:4996;Parent=Msa0837460-mRNA-1
chr5_4 exon 11437856 11437975 11437856 ID=Msa0837460-mRNA-1:exon:4997;Parent=Msa0837460-mRNA-1
chr5_4 exon 11438064 11438162 11438064 ID=Msa0837460-mRNA-1:exon:4998;Parent=Msa0837460-mRNA-1
chr5_4 exon 11438260 11438370 11438260 ID=Msa0837460-mRNA-1:exon:4999;Parent=Msa0837460-mRNA-1
chr5_4 exon 11438696 11438752 11438696 ID=Msa0837460-mRNA-1:exon:5000;Parent=Msa0837460-mRNA-1
chr5_4 exon 11438849 11439440 11438849 ID=Msa0837460-mRNA-1:exon:5001;Parent=Msa0837460-mRNA-1
chr5_4 five_prime_UTR 11433084 11433178 11433084 ID=Msa0837460-mRNA-1:five_prime_utr;Parent=Msa0837460-mRNA-1
chr5_4 five_prime_UTR 11433279 11433288 11433279 ID=Msa0837460-mRNA-1:five_prime_utr;Parent=Msa0837460-mRNA-1
chr5_4 CDS 11433289 11433360 11433289 ID=Msa0837460-mRNA-1:cds;Parent=Msa0837460-mRNA-1
chr5_4 CDS 11433496 11433732 11433496 ID=Msa0837460-mRNA-1:cds;Parent=Msa0837460-mRNA-1
chr5_4 CDS 11434089 11434190 11434089 ID=Msa0837460-mRNA-1:cds;Parent=Msa0837460-mRNA-1
chr5_4 CDS 11434456 11434802 11434456 ID=Msa0837460-mRNA-1:cds;Parent=Msa0837460-mRNA-1
chr5_4 CDS 11434904 11435093 11434904 ID=Msa0837460-mRNA-1:cds;Parent=Msa0837460-mRNA-1
chr5_4 CDS 11435209 11435384 11435209 ID=Msa0837460-mRNA-1:cds;Parent=Msa0837460-mRNA-1
chr5_4 CDS 11436111 11436180 11436111 ID=Msa0837460-mRNA-1:cds;Parent=Msa0837460-mRNA-1
chr5_4 CDS 11436267 11436456 11436267 ID=Msa0837460-mRNA-1:cds;Parent=Msa0837460-mRNA-1
chr5_4 CDS 11436581 11436673 11436581 ID=Msa0837460-mRNA-1:cds;Parent=Msa0837460-mRNA-1
chr5_4 CDS 11436866 11436960 11436866 ID=Msa0837460-mRNA-1:cds;Parent=Msa0837460-mRNA-1
chr5_4 CDS 11437055 11437174 11437055 ID=Msa0837460-mRNA-1:cds;Parent=Msa0837460-mRNA-1
chr5_4 CDS 11437856 11437975 11437856 ID=Msa0837460-mRNA-1:cds;Parent=Msa0837460-mRNA-1
chr5_4 CDS 11438064 11438162 11438064 ID=Msa0837460-mRNA-1:cds;Parent=Msa0837460-mRNA-1
chr5_4 CDS 11438260 11438370 11438260 ID=Msa0837460-mRNA-1:cds;Parent=Msa0837460-mRNA-1
chr5_4 CDS 11438696 11438752 11438696 ID=Msa0837460-mRNA-1:cds;Parent=Msa0837460-mRNA-1
chr5_4 CDS 11438849 11439079 11438849 ID=Msa0837460-mRNA-1:cds;Parent=Msa0837460-mRNA-1
chr5_4 three_prime_UTR 11439080 11439440 11439080 ID=Msa0837460-mRNA-1:three_prime_utr;Parent=Msa0837460-mRNA-1
Gene Sequence

>Msa0837460

ATGGATTCCAAGAACAATGTGAAGAACGACGATCCTGCAGTGGAATCACCAACTTCAGTCCTAGAAGAAGAGGAAGTGGAGGTGAAATCGGAGGAAGAGGTGATTGCAGATGATGTGTCATCGCTTGTACCGAAAACAATGGCTGAGGAAGAAGAGAAGTTGCTGAAAGCTCGTGCAAAGGAAGAAGAGGAAAAGATTGAAGTTGCGCCGAATCTGAATGATTCACAGTTTAATAAGTTGGATGAGCTTTTGACACAGACTAAACTCTACTCAGAGTTTCTTTTGGAGAAAATGGATGATATTACAATGGCTGCGGGTGAACAAGAGAAACCGGATGAAGAAGAGAGTAAACTGGTTGCAAAAAAGAAGGGCCGTGGATCAAAAAGAAAGGCAGCCTCACAATGCAATACTGGAAAAGCCAAAAAGGCAGTTGAAGCCATGATTACAAGATCTAAAGAAAATGTGAAGACTGAGGATGTGGATTTGACCGAGGAAGAAAGAACTGAGAAAGAGCAGAGGGAGCTGATGCCTTTACTAACTGGTGGAAAATTGAAATCTTATCAACTGAAGGGTGTTAAGTGGTTGATTTCCTTGTGGCAAAATGGATTGAATGGGATTCTTGCTGATCAAATGGGTCTTGGGAAGACAATCCAAACAATTGGGTTTCTTTCTCATCTAAAATCGAAAGGATTGGATGGGCCATATATGATAATTGCTCCTCTATCAACCCTCTCCAATTGGATGAATGAGATTAATAGGTTTACACCAACGCTCCCTGCTGTTATCTACCATGGTAACAAATATCAGAGAGATGAAATCAGAAGGAAACATATGCCTAGAACAGTTGGCCCAAAATTCCCTCTAGTAATAACTTCTTATGAGATTGCTATGAATGATGCTAAGAAGTGTTTAAGGTCATACAGTTGGAAGTATCTTGTTGTTGATGAGGGACACAGGCTGAAAAATGCCAACTGCAAATTAGTGAGGATGTTGAAATACATCAGTGTTGAAAATAAGCTTCTTTTGACTGGTACACCGCTCCAGAATAACTTGGCTGAGCTATGGTCACTGCTGCACTTCATCTTACCTGATATATTCTCATCTCTTGAAGAATTTGAGTCATGGTTTAACCTGTCGGGAAAGAGCACTACTGGAGCAACAATGGAAGAGTTGGAAGAGAAAAGAAGAACCCAAGTTGTGGCCAAGCTTCATTCAATTCTTAGGCCATTTCTGTTGCGTAGGATGAAGTCTGATGTTGAGCTAATGTTGCCACGGAAAAAAGAGATCATTGTTTATGCCAACATGACTGAGCATCAGAAGAACTTGCAGGATCATTTAATTAATGAGACACTGGAGAAATATTTGGACAAGAAACGATCAGTTGGACGTGCTCCAACAAGTCTTAATAATTTGGTTATTCAGCTAAGAAAAGTCTGTAACCATCCTGACCTCTTAGAATCAGTCTTTGATGGTTCATATTTTTATCCTCCTGTGAATGAGATAATTGAAAAATGTGGAAAATTTCAATTGCTCGACCGATTGCTGGAGCGGCTATTTGCACGGAATCACAAGGTTCTGATCTTCAGTCAGTGGACCAAAGTGCTAGATATAATGGATTATTATTTTAGTGAAAAGGGTTTCGAAGTTTGCAGGATTGATGGTTCGGTGAAGCTGGATGATAGGAAACGGCAGATCCAGGACTTCAATGATACAACCAGCAACTGCAGAATCTTTCTTCTTTCCACCAGGGCTGGTGGGTTGGGAATAAACCTCACTGCAGCTGACACTTGTATTCTTTATGACAGTGACTGGAATCCTCAAATGGATTTACAGGCCATGGATAGATGTCACAGAATCGGTCAAACAAAGCCTGTTCATGTTTACAGGCTCGCTACTGCACAATCAGTAGAGGGTCGGATGTTGAAAAGAGCTTTCAGCAAGTTGAAGCTTGAGCATGTGGTGATAGAGAAAGGACAATTTCATCAGGAGCGCACAAAGCCTTCCCTTATGGATGAAATGGAGGGTGAATGGATCAGCCTAACTCCAAGATTTACTGAAATACGAAGAGGACAATCCAAAGAAGAGGATGTTTTGGCATTGCTTCGAGATGAAGAAACCGCTGAGGACAAAATGATACAGAAAGATATTAGTGATGAAGACCTGGAGAAGCTCTTGGATCGCAGCGATCTTGTTATCAATAGCTCAACTGATGATAAAGCTGCAGTTAGTACCTTTTCTCTTAAAGGGCCTGGATGGGAAGTGGTGATGCCAACTGCGGCAGGGGGCATGCTTTCCACTCTCAACAGCTAA
Protein sequence

>Msa0837460

MDSKNNVKNDDPAVESPTSVLEEEEVEVKSEEEVIADDVSSLVPKTMAEEEEKLLKARAKEEEEKIEVAPNLNDSQFNKLDELLTQTKLYSEFLLEKMDDITMAAGEQEKPDEEESKLVAKKKGRGSKRKAASQCNTGKAKKAVEAMITRSKENVKTEDVDLTEEERTEKEQRELMPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKSKGLDGPYMIIAPLSTLSNWMNEINRFTPTLPAVIYHGNKYQRDEIRRKHMPRTVGPKFPLVITSYEIAMNDAKKCLRSYSWKYLVVDEGHRLKNANCKLVRMLKYISVENKLLLTGTPLQNNLAELWSLLHFILPDIFSSLEEFESWFNLSGKSTTGATMEELEEKRRTQVVAKLHSILRPFLLRRMKSDVELMLPRKKEIIVYANMTEHQKNLQDHLINETLEKYLDKKRSVGRAPTSLNNLVIQLRKVCNHPDLLESVFDGSYFYPPVNEIIEKCGKFQLLDRLLERLFARNHKVLIFSQWTKVLDIMDYYFSEKGFEVCRIDGSVKLDDRKRQIQDFNDTTSNCRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRMLKRAFSKLKLEHVVIEKGQFHQERTKPSLMDEMEGEWISLTPRFTEIRRGQSKEEDVLALLRDEETAEDKMIQKDISDEDLEKLLDRSDLVINSSTDDKAAVSTFSLKGPGWEVVMPTAAGGMLSTLNS*