AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0280460

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0280460 MtrunA17_Chr2g0294361 96.664 1169 16 5 1 1163 1 1152 0.0 2326
Msa0280460 MtrunA17_Chr2g0303971 54.905 1162 469 7 5 1162 2 1112 0.0 1341
Msa0280460 MtrunA17_Chr1g0193441 51.878 1145 515 9 25 1157 1 1121 0.0 1173
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0280460 AT2G18790.1 73.639 1157 273 7 10 1157 21 1154 0.0 1799
Msa0280460 AT4G16250.1 72.117 1162 294 6 2 1154 15 1155 0.0 1753
Msa0280460 AT2G18790.2 74.767 1074 255 6 10 1074 21 1087 0.0 1689
Msa0280460 AT4G18130.1 57.307 1129 425 13 36 1152 11 1094 0.0 1319
Msa0280460 AT1G09570.3 51.047 1146 526 8 24 1157 4 1126 0.0 1181
Msa0280460 AT1G09570.4 51.092 1145 525 8 25 1157 1 1122 0.0 1181
Msa0280460 AT1G09570.5 51.092 1145 525 8 25 1157 1 1122 0.0 1181
Msa0280460 AT1G09570.1 51.092 1145 525 8 25 1157 1 1122 0.0 1181
Msa0280460 AT1G09570.6 51.092 1145 525 8 25 1157 1 1122 0.0 1181
Msa0280460 AT5G35840.1 51.475 1119 502 13 48 1154 21 1110 0.0 1179
Msa0280460 AT1G09570.2 52.554 1018 459 6 146 1157 15 1014 0.0 1090
Msa0280460 AT5G10720.1 26.295 251 168 8 918 1156 371 616 3.78e-14 77.8

Find 336 sgRNAs with CRISPR-Local

Find 557 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAACCGCCACGTTGGATTT+TGG 0.185386 2_3:+15164199 None:intergenic
GCTATGGCTGTTATTATTAA+TGG 0.196717 2_3:-15163387 Msa0280460:CDS
TATCCTACGAGACTCGTTTA+AGG 0.197702 2_3:-15162662 Msa0280460:CDS
TGCTCAGTATATGGCGAATA+TGG 0.211018 2_3:-15163427 Msa0280460:CDS
AACATTATCAGGAAAATTTC+AGG 0.213202 2_3:+15158359 None:intergenic
ATCAAGACATTGGCTGTTTA+TGG 0.214871 2_3:-15159638 Msa0280460:CDS
TTCATCTTCAAAACACAAAA+TGG 0.221368 2_3:-15164486 Msa0280460:exon
GCTTCATGATCTTGTGTATA+AGG 0.226995 2_3:-15162413 Msa0280460:CDS
TACTCAGAGTCCTAGTATTA+TGG 0.230852 2_3:-15163106 Msa0280460:CDS
TAATGGTCAACATGAGTAAT+AGG 0.236772 2_3:+15158581 None:intergenic
TTAGTCTTATGAATCCTATT+TGG 0.238076 2_3:-15163950 Msa0280460:CDS
ATACGGCAAAAGAGATTAAA+TGG 0.246609 2_3:-15162831 Msa0280460:CDS
CTCTTCTGCATGCTGAATTT+AGG 0.253412 2_3:-15159487 Msa0280460:intron
ATTGACATCAACGGCAAATA+TGG 0.260448 2_3:+15162513 None:intergenic
TATCCCGGGGCTGCTTCTCT+TGG 0.261141 2_3:-15162922 Msa0280460:CDS
GATCCTGCTCTTTCCATTGC+TGG 0.262725 2_3:-15163834 Msa0280460:CDS
GATTGATTTGGAGCCGTATA+TGG 0.265474 2_3:-15163625 Msa0280460:CDS
ATTGTAATGCTTCTCCTGTT+AGG 0.281262 2_3:-15163524 Msa0280460:CDS
GTGCAAAACAACAATCTAAT+TGG 0.292232 2_3:+15158441 None:intergenic
GCTCTTCACCACTTCTAAAA+AGG 0.296180 2_3:+15162738 None:intergenic
TGAACCCAAGGTTCTTATAA+AGG 0.296468 2_3:+15159383 None:intergenic
TTTGTTGGTCAGGATGTTAC+TGG 0.297776 2_3:-15161452 Msa0280460:CDS
GCCAATGTCTTGATTTCTTC+GGG 0.299683 2_3:+15159647 None:intergenic
TGCCTGTCAACAAATGAAAA+TGG 0.300170 2_3:+15161137 None:intergenic
TCTCAGCTTCAATCACTTCC+TGG 0.303003 2_3:-15163774 Msa0280460:CDS
GTACCCTAAGTTGTCTTGTT+AGG 0.309628 2_3:+15158520 None:intergenic
ATCCCGGGGCTGCTTCTCTT+GGG 0.310543 2_3:-15162921 Msa0280460:CDS
GAGTTTCTAATGCAGGCTTT+TGG 0.310885 2_3:-15163243 Msa0280460:CDS
CTATGGCTGTTATTATTAAT+GGG 0.311031 2_3:-15163386 Msa0280460:CDS
CTCTTGGGGATGCGGTTTGT+GGG 0.311504 2_3:-15162906 Msa0280460:CDS
CTCTTAGCAATAACATTACT+TGG 0.312544 2_3:+15159699 None:intergenic
AAGAAATTCTATGAGGCTTT+GGG 0.312740 2_3:-15163328 Msa0280460:CDS
ACGCTTTACAAACTCTCTTC+TGG 0.320871 2_3:-15160907 Msa0280460:CDS
TTCTGAATTGACGGGACTTC+TGG 0.320924 2_3:-15162461 Msa0280460:CDS
GAGTCCTAGTATTATGGATT+TGG 0.324779 2_3:-15163100 Msa0280460:CDS
GAAGAAATTCTATGAGGCTT+TGG 0.326500 2_3:-15163329 Msa0280460:CDS
GAGAATTGACTGGTTATGAT+AGG 0.328023 2_3:-15163707 Msa0280460:CDS
TTGCTTAGGGATTCTCCTAC+TGG 0.331601 2_3:-15163135 Msa0280460:CDS
GTCTCTGCCATAACATTATC+AGG 0.332357 2_3:+15158348 None:intergenic
CCCCGACCGAGTCTCAAATA+AGG 0.339325 2_3:-15163020 Msa0280460:CDS
ATTATTTGTATAATCCTTGC+TGG 0.347426 2_3:+15161490 None:intergenic
GCATCCTCGTTCTTCCTTCA+AGG 0.348997 2_3:-15162761 Msa0280460:CDS
GGCTGCTTCTCTTGGGGATG+CGG 0.351825 2_3:-15162914 Msa0280460:CDS
ATCCTGCTCTTTCCATTGCT+GGG 0.354965 2_3:-15163833 Msa0280460:CDS
TTGTAATGCTTCTCCTGTTA+GGG 0.355468 2_3:-15163523 Msa0280460:CDS
GCAACTCTAGTTCTGCCATA+TGG 0.355513 2_3:+15162602 None:intergenic
GAGTCACCCACTTACTGTTA+TGG 0.355851 2_3:+15158782 None:intergenic
CTATGAAGAATACCATAAAA+AGG 0.356979 2_3:+15163903 None:intergenic
TGGATTCATTCTAGATCTAC+TGG 0.359715 2_3:-15163930 Msa0280460:CDS
CTGATATGCGTGCACCTTCA+TGG 0.362163 2_3:-15158323 Msa0280460:three_prime_UTR
GACTGGTTATGATAGGGTTA+TGG 0.363361 2_3:-15163700 Msa0280460:CDS
GTTAGAGCCTGTTGAAGTTC+AGG 0.364329 2_3:+15161020 None:intergenic
TGGAGCCGTACAGATGTAAT+TGG 0.366605 2_3:-15161278 Msa0280460:CDS
GATCTAGAATGAATCCAAAT+AGG 0.366874 2_3:+15163936 None:intergenic
TGGTTGTCATGCTCAGTATA+TGG 0.371661 2_3:-15163436 Msa0280460:CDS
TGTTGTGTGATATGTTGCTT+AGG 0.373991 2_3:-15163149 Msa0280460:CDS
GGCGGTACAGTCTCAGAAAT+TGG 0.377744 2_3:-15163811 Msa0280460:CDS
AGCCAATGTCTTGATTTCTT+CGG 0.378125 2_3:+15159646 None:intergenic
TATGGGGTCGATTGCTTCGT+TGG 0.380706 2_3:-15163409 Msa0280460:CDS
TTGTAGTGATTTGAAGTTGA+TGG 0.382183 2_3:+15164408 None:intergenic
GGGTGACTCAAGAAGGTTTA+GGG 0.384076 2_3:-15158768 Msa0280460:CDS
TGTTGGTGTTGTCATTGATT+TGG 0.384606 2_3:-15163874 Msa0280460:CDS
ACTTCCTGGTGGTGATGTTA+AGG 0.387596 2_3:-15163760 Msa0280460:CDS
TGGAGTGTGCTTTGTTGGTC+AGG 0.388444 2_3:-15161462 Msa0280460:CDS
CCTTCCACATTTACTAAGAC+TGG 0.390711 2_3:+15159357 None:intergenic
TCTCTTGGGGATGCGGTTTG+TGG 0.391169 2_3:-15162907 Msa0280460:CDS
TGGTAGTTTCTGTCAGTTGA+AGG 0.391949 2_3:-15161231 Msa0280460:CDS
GAGTGGTTGTTGGCCTTTCA+TGG 0.392022 2_3:-15162988 Msa0280460:CDS
TGAGAGTAAGAGGATTGATT+TGG 0.394565 2_3:-15163637 Msa0280460:CDS
ACTTGTGCAGCCGGTTTGTT+TGG 0.398125 2_3:-15163484 Msa0280460:CDS
TTTACTAGAGAAAGCCTTCT+CGG 0.398638 2_3:-15163982 Msa0280460:CDS
TTGGCTGATGCTGGTTATCC+CGG 0.399685 2_3:-15162937 Msa0280460:CDS
TGGAAAACTGTTGGTGGGAG+AGG 0.401204 2_3:-15161258 Msa0280460:CDS
TGGCCCGGGGAATCAAAATA+AGG 0.403784 2_3:-15161540 Msa0280460:CDS
GGGTTTGAGTACTGATAGTT+TGG 0.404410 2_3:-15162956 Msa0280460:CDS
AGCAAATGTTAAAGATAATA+CGG 0.404557 2_3:-15160824 Msa0280460:CDS
AAGTTGTTGCTGAGAGTAAG+AGG 0.406941 2_3:-15163647 Msa0280460:CDS
TAAGCAGTGATCTGTTGTTC+AGG 0.408367 2_3:+15164227 None:intergenic
GCAGGATCCTCAGATCTTGC+AGG 0.408558 2_3:+15163849 None:intergenic
ATGGGAGGGATCAATGCATT+TGG 0.411895 2_3:+15161365 None:intergenic
GGATAATGCAAACCCATATA+CGG 0.412654 2_3:+15163612 None:intergenic
GCCGAATCAGCTTGTTCAAA+TGG 0.412731 2_3:+15158495 None:intergenic
AACATGTCTTGAATCAATTC+AGG 0.412981 2_3:+15158805 None:intergenic
CTTTCTTGACTGCAAATAAG+AGG 0.413952 2_3:-15161097 Msa0280460:CDS
TGGCTGATGCTGGTTATCCC+GGG 0.418262 2_3:-15162936 Msa0280460:CDS
CCCTTATTTGAGACTCGGTC+GGG 0.419443 2_3:+15163019 None:intergenic
GCACGAGCTGAGTATATAAA+TGG 0.420961 2_3:+15158546 None:intergenic
GTGCAGCCGGTTTGTTTGGT+GGG 0.425228 2_3:-15163480 Msa0280460:CDS
TTTATGTGGATGAAAATAGA+AGG 0.425284 2_3:+15164531 None:intergenic
TGTGAGTCCTGAACTTCAAC+AGG 0.425531 2_3:-15161027 Msa0280460:CDS
GCTCAGTATATGGCGAATAT+GGG 0.425898 2_3:-15163426 Msa0280460:CDS
TGGGTGACTCAAGAAGGTTT+AGG 0.429709 2_3:-15158769 Msa0280460:CDS
TGGGGATGCGGTTTGTGGGA+TGG 0.430270 2_3:-15162902 Msa0280460:CDS
TGCCCATCATCCTTATCCTC+CGG 0.431478 2_3:+15162790 None:intergenic
GAAAATGAGGACGTTTGGCC+CGG 0.434099 2_3:-15161555 Msa0280460:CDS
CAACTCTAGTTCTGCCATAT+GGG 0.434537 2_3:+15162603 None:intergenic
TGCTTGTGAGTTTCTAATGC+AGG 0.435256 2_3:-15163250 Msa0280460:CDS
GGCCTTTCATGGTGATTCGA+CGG 0.436669 2_3:-15162977 Msa0280460:CDS
GTCGATTGCTTCGTTGGCTA+TGG 0.437486 2_3:-15163403 Msa0280460:CDS
AATGGCAACAAACTATCTAA+TGG 0.437769 2_3:+15158564 None:intergenic
ATGAAAAGTGGTTGTTTATG+TGG 0.439533 2_3:+15164517 None:intergenic
TGTTTAAGCAGAATAGGGTT+AGG 0.440240 2_3:-15163557 Msa0280460:CDS
ATCCCCAAGAGAAGCAGCCC+CGG 0.441906 2_3:+15162918 None:intergenic
ACCATTTGAACAAGCTGATT+CGG 0.442368 2_3:-15158496 Msa0280460:three_prime_UTR
GATGTCAATGGCCGCATCAA+TGG 0.443595 2_3:-15162499 Msa0280460:CDS
AAAGCATCACCCGGAGGATA+AGG 0.445917 2_3:-15162800 Msa0280460:CDS
GAGTTCTGTGGCTAGAGAAA+TGG 0.449159 2_3:-15162563 Msa0280460:CDS
CAAGCATACCTAAGAGGAAA+AGG 0.449519 2_3:+15163267 None:intergenic
TGCACCATCTCCAGATGGTT+GGG 0.450878 2_3:-15159558 Msa0280460:CDS
ATGGCGAAGTCCAGTATGTC+AGG 0.451902 2_3:-15158711 Msa0280460:CDS
CATTGATAAATGAAAGTAGA+TGG 0.453443 2_3:-15157962 Msa0280460:three_prime_UTR
GATTATACAAATAATATAGT+TGG 0.453661 2_3:-15161482 Msa0280460:CDS
CAGTGATGGCGAAATAAATC+AGG 0.453968 2_3:+15158118 None:intergenic
AATGGTCAACATGAGTAATA+GGG 0.454133 2_3:+15158582 None:intergenic
AACTACTATCCTGTTGTCTC+TGG 0.454992 2_3:+15160994 None:intergenic
ACAGCCTTTATAAGAACCTT+GGG 0.456111 2_3:-15159387 Msa0280460:intron
AACATGGATGGTCAGATCAT+TGG 0.456366 2_3:-15161071 Msa0280460:CDS
TGAATCTCTACCCAACCATC+TGG 0.457981 2_3:+15159548 None:intergenic
ATAGTTGGAGTGTGCTTTGT+TGG 0.461446 2_3:-15161467 Msa0280460:CDS
GTTCTGCCTCCCTGACATAC+TGG 0.464134 2_3:+15158701 None:intergenic
CCTTATCTGTAGTTAGAGCT+AGG 0.464270 2_3:-15158085 Msa0280460:three_prime_UTR
ATTGATTTGGAGCCGTATAT+GGG 0.464793 2_3:-15163624 Msa0280460:CDS
GCCTTTCATGGTGATTCGAC+GGG 0.465038 2_3:-15162976 Msa0280460:CDS
GGATGAGGCACTTGTGCAGC+CGG 0.465118 2_3:-15163493 Msa0280460:CDS
TGCAAAGGTTTCTGAATTGA+CGG 0.465906 2_3:-15162470 Msa0280460:CDS
CCCGACCGAGTCTCAAATAA+GGG 0.466402 2_3:-15163019 Msa0280460:CDS
GCCCATCATCCTTATCCTCC+GGG 0.466910 2_3:+15162791 None:intergenic
TTTGTCATCATACTTCTGCT+AGG 0.467172 2_3:-15163296 Msa0280460:CDS
TACACAATTATTTGCAAACT+AGG 0.468250 2_3:+15158160 None:intergenic
ATATTTGCCGTTGATGTCAA+TGG 0.469357 2_3:-15162511 Msa0280460:CDS
GTTGTGTGATATGTTGCTTA+GGG 0.469955 2_3:-15163148 Msa0280460:CDS
AAGCCTCATAGAATTTCTTC+CGG 0.470679 2_3:+15163332 None:intergenic
GAAGGGTGAAAGTGAAGGGA+AGG 0.470903 2_3:+15164549 None:intergenic
GGCTGTTGTGCATACCCATA+TGG 0.471265 2_3:-15162617 Msa0280460:CDS
TACAGCCTTTATAAGAACCT+TGG 0.472241 2_3:-15159388 Msa0280460:intron
CACCCGGAGGATAAGGATGA+TGG 0.472296 2_3:-15162793 Msa0280460:CDS
CTGTTTATGGTGATCAATTG+AGG 0.475806 2_3:-15159625 Msa0280460:CDS
CTGTGGCTAGAGAAATGGTT+AGG 0.476994 2_3:-15162558 Msa0280460:CDS
TAAGCGAGAACGCGAAAAGA+AGG 0.480031 2_3:+15164140 None:intergenic
ATTGAGGATTCAACAAGTCT+TGG 0.481443 2_3:-15159609 Msa0280460:CDS
TTGATGGCGTTGAGAAATTG+AGG 0.481561 2_3:+15164424 None:intergenic
ACTGATAGTTTGGCTGATGC+TGG 0.481944 2_3:-15162946 Msa0280460:CDS
ATGGATTTGGTTAAGTGTGA+TGG 0.485856 2_3:-15163087 Msa0280460:CDS
TACGGCAAAAGAGATTAAAT+GGG 0.486565 2_3:-15162830 Msa0280460:CDS
CTTCTTTCTCATGCTTTGAA+AGG 0.487457 2_3:-15162367 Msa0280460:intron
AAGTGATTGAAGCTGAGAAA+TGG 0.487825 2_3:+15163779 None:intergenic
GGAATGATGAAGACGGTGTT+GGG 0.488931 2_3:-15163365 Msa0280460:CDS
GAGATGAAAATGAGGACGTT+TGG 0.489215 2_3:-15161560 Msa0280460:CDS
AGTACGCTTCGTGCTCCTCA+TGG 0.492653 2_3:-15163456 Msa0280460:CDS
GCAGTGGGACAATGCAGAAA+TGG 0.492893 2_3:-15162707 Msa0280460:CDS
TGCTCTTTCCATTGCTGGGG+CGG 0.493198 2_3:-15163829 Msa0280460:CDS
AGAATTGACTGGTTATGATA+GGG 0.493605 2_3:-15163706 Msa0280460:CDS
CTCACCTAACAAGACAACTT+AGG 0.496548 2_3:-15158524 Msa0280460:three_prime_UTR
TTGACATCAACGGCAAATAT+GGG 0.496938 2_3:+15162514 None:intergenic
AACTCACAAGCATACCTAAG+AGG 0.497763 2_3:+15163261 None:intergenic
GCTTGGTATTACTCCTCAAT+CGG 0.499073 2_3:-15164096 Msa0280460:CDS
TGGATTTGGTTAAGTGTGAT+GGG 0.499644 2_3:-15163086 Msa0280460:CDS
GATGAAGACGGTGTTGGGAT+TGG 0.500439 2_3:-15163360 Msa0280460:CDS
ACATGTTCCATAACAGTAAG+TGG 0.501404 2_3:-15158789 Msa0280460:CDS
GGTAGTTTCTGTCAGTTGAA+GGG 0.502944 2_3:-15161230 Msa0280460:CDS
TCCCCAAGAGAAGCAGCCCC+GGG 0.502960 2_3:+15162919 None:intergenic
TGCGTACATCATAGCTGTAA+TGG 0.505696 2_3:-15158266 Msa0280460:three_prime_UTR
TCCCGGGGCTGCTTCTCTTG+GGG 0.508202 2_3:-15162920 Msa0280460:CDS
TGCTTAGGGATTCTCCTACT+GGG 0.510110 2_3:-15163134 Msa0280460:CDS
TTAACCAAATCCATAATACT+AGG 0.513188 2_3:+15163096 None:intergenic
AGAATAAAACAAATTTCAGA+TGG 0.515276 2_3:-15159515 Msa0280460:CDS
TGCAAATAAGAGGGTTAACA+TGG 0.515853 2_3:-15161087 Msa0280460:CDS
AAAATGAGGACGTTTGGCCC+GGG 0.516904 2_3:-15161554 Msa0280460:CDS
TCAAGTGAAGGTACCGATTG+AGG 0.519265 2_3:+15164083 None:intergenic
GGATATTATAGAGTGGTTGT+TGG 0.519979 2_3:-15162998 Msa0280460:CDS
GTTTAGGGCTGAGCATGAGC+AGG 0.520717 2_3:-15158753 Msa0280460:CDS
TCACCTAACAAGACAACTTA+GGG 0.521262 2_3:-15158523 Msa0280460:three_prime_UTR
TTGTGAAGGATGGTGTGTCC+TGG 0.522280 2_3:-15158841 Msa0280460:intron
GGGAATGATGAAGACGGTGT+TGG 0.522377 2_3:-15163366 Msa0280460:CDS
ATCTTGACAGCATCGATGAC+GGG 0.522401 2_3:-15160794 Msa0280460:intron
ATGTCAATGGCCGCATCAAT+GGG 0.523002 2_3:-15162498 Msa0280460:CDS
CAGGGAAACTACTACCCGTT+GGG 0.525967 2_3:-15163048 Msa0280460:CDS
CCTAGCTCTAACTACAGATA+AGG 0.527107 2_3:+15158085 None:intergenic
ATGCACCATCTCCAGATGGT+TGG 0.527997 2_3:-15159559 Msa0280460:CDS
GATGATGAGTCATCGTCCTC+AGG 0.528943 2_3:-15164056 Msa0280460:CDS
GAATAGGGTTAGGATGATTG+TGG 0.528957 2_3:-15163547 Msa0280460:CDS
CATTGTCCCACTGCATACTA+CGG 0.530498 2_3:+15162716 None:intergenic
AGGATAGTAGTTGCTTTGCT+AGG 0.531396 2_3:-15160983 Msa0280460:CDS
TTTCTGGTTCAGATCGCATA+CGG 0.532736 2_3:-15162848 Msa0280460:CDS
ATTCTTCATAGGATTGATGT+TGG 0.533075 2_3:-15163891 Msa0280460:CDS
TTCAGTACAGAGGATAATGC+TGG 0.533572 2_3:+15158207 None:intergenic
AAGATTATAAAGTTAATGAA+TGG 0.533812 2_3:-15158730 Msa0280460:CDS
GTCTTGCACAATGCACTTGG+TGG 0.533962 2_3:-15161179 Msa0280460:CDS
TGGCAGAACTAGAGTTGCAA+GGG 0.534502 2_3:-15162597 Msa0280460:CDS
CGGTCGGGGTAACACCCAAC+GGG 0.534504 2_3:+15163034 None:intergenic
GCAAAGGTTTCTGAATTGAC+GGG 0.536706 2_3:-15162469 Msa0280460:CDS
GTACTCCCCACCAAACAAAC+CGG 0.537143 2_3:+15163474 None:intergenic
TGTGCAGCCGGTTTGTTTGG+TGG 0.540330 2_3:-15163481 Msa0280460:CDS
TGCAGCCGGTTTGTTTGGTG+GGG 0.540489 2_3:-15163479 Msa0280460:CDS
ACCCGTCGAATCACCATGAA+AGG 0.542768 2_3:+15162975 None:intergenic
TGTAAAGCGTATGCCACTCA+AGG 0.544982 2_3:+15160920 None:intergenic
AAGTTTCATGAGGATGAGCA+TGG 0.548236 2_3:-15163672 Msa0280460:CDS
TCTAACAGTCCAGAGACAAC+AGG 0.548303 2_3:-15161003 Msa0280460:CDS
AAATCCAGTCTTAGTAAATG+TGG 0.548848 2_3:-15159361 Msa0280460:CDS
CTTAGAGTGGAACAATGCTA+TGG 0.549461 2_3:-15161315 Msa0280460:CDS
CTTCTGGTAGAGGATGCTAT+GGG 0.549738 2_3:-15162445 Msa0280460:CDS
GGACACCCACTTGGCCATGA+AGG 0.550311 2_3:+15158309 None:intergenic
TCAGTTAGCCGCGCAGTCGT+TGG 0.551191 2_3:-15163199 Msa0280460:CDS
GGCAGATTTCTTAATGAATG+TGG 0.552534 2_3:-15159588 Msa0280460:CDS
TCCTGCTCTTTCCATTGCTG+GGG 0.553892 2_3:-15163832 Msa0280460:CDS
CTATGGAAAAGCTCAGCGGT+TGG 0.554620 2_3:-15161298 Msa0280460:CDS
ACTAATCTCTCGAGCCGAGA+AGG 0.556689 2_3:+15163968 None:intergenic
CACAAGCAGCACTAGTCTCA+AGG 0.557329 2_3:+15160850 None:intergenic
AATAGAAGGGTGAAAGTGAA+GGG 0.557375 2_3:+15164545 None:intergenic
GGTGTTGGGATTGGTGGTAC+CGG 0.558914 2_3:-15163351 Msa0280460:CDS
TGTTGCGTATATCACTGAAA+AGG 0.559174 2_3:-15162878 Msa0280460:CDS
AGTAAGTGGGTGACTCAAGA+AGG 0.559236 2_3:-15158775 Msa0280460:CDS
ACAGCGATCATTGAACCAAA+AGG 0.559415 2_3:+15164170 None:intergenic
CGCTATGCACCATCTCCAGA+TGG 0.560025 2_3:-15159563 Msa0280460:CDS
AATGGACTCCACTCCATGGT+TGG 0.561206 2_3:-15158248 Msa0280460:three_prime_UTR
TTTAAGCTTCTCCGCGTCAC+AGG 0.561496 2_3:+15158649 None:intergenic
GCAAATGTTAAAGATAATAC+GGG 0.561813 2_3:-15160823 Msa0280460:CDS
AATATCCCTTATTTGAGACT+CGG 0.561836 2_3:+15163014 None:intergenic
TTTGTCGCTGGACACCCACT+TGG 0.562564 2_3:+15158300 None:intergenic
GTCGCCGGATTGTTCGAAAA+CGG 0.563017 2_3:+15164295 None:intergenic
AGACTGTACCGCCCCAGCAA+TGG 0.563826 2_3:+15163821 None:intergenic
ATCAGGTAGGGAACACACCT+TGG 0.564239 2_3:+15158135 None:intergenic
TTTCTTGACTGCAAATAAGA+GGG 0.567164 2_3:-15161096 Msa0280460:CDS
TCCTGCTACTGATATACCGC+AGG 0.567521 2_3:-15163592 Msa0280460:CDS
TCCCTTATTTGAGACTCGGT+CGG 0.568120 2_3:+15163018 None:intergenic
TCCCGAAGAAATCAAGACAT+TGG 0.568553 2_3:-15159648 Msa0280460:CDS
GCCTGCGGTATATCAGTAGC+AGG 0.569063 2_3:+15163591 None:intergenic
AATAAGAGGGTTAACATGGA+TGG 0.569526 2_3:-15161083 Msa0280460:CDS
ACTTCTGGTAGAGGATGCTA+TGG 0.571188 2_3:-15162446 Msa0280460:CDS
TAACATACAAGGTGACTACA+AGG 0.571440 2_3:-15161402 Msa0280460:CDS
GAAGACGGTGTTGGGATTGG+TGG 0.571555 2_3:-15163357 Msa0280460:CDS
AGAATGTTGAGATGAAAATG+AGG 0.572138 2_3:-15161568 Msa0280460:CDS
AAGGGTGAAAGTGAAGGGAA+GGG 0.573129 2_3:+15164550 None:intergenic
TCAGGGAAACTACTACCCGT+TGG 0.573808 2_3:-15163049 Msa0280460:CDS
AGTGATCTGTTGTTCAGGTA+CGG 0.574139 2_3:+15164232 None:intergenic
ATTGTCTTGCACAATGCACT+TGG 0.574465 2_3:-15161182 Msa0280460:CDS
ATAACACATGTTGCTTAGAG+TGG 0.574941 2_3:-15161328 Msa0280460:CDS
CTGATATACCGCAGGCGTCG+AGG 0.576847 2_3:-15163584 Msa0280460:CDS
AAATAGAAGGGTGAAAGTGA+AGG 0.577498 2_3:+15164544 None:intergenic
ATGAAAGTAGATGGTCACAT+TGG 0.577539 2_3:-15157953 Msa0280460:three_prime_UTR
GCCCCAGCAATGGAAAGAGC+AGG 0.579994 2_3:+15163831 None:intergenic
AGCTGAGAATAACGATTCAA+AGG 0.580385 2_3:-15162638 Msa0280460:CDS
GGGTGGTGCAAAGCATCACC+CGG 0.581851 2_3:-15162809 Msa0280460:CDS
AGGATGGTGTGTCCTGGTGA+AGG 0.588431 2_3:-15158835 Msa0280460:CDS
GATCTTGACAGCATCGATGA+CGG 0.589327 2_3:-15160795 Msa0280460:CDS
AGAGTAATCGAAAGAGTCGC+CGG 0.589392 2_3:+15164280 None:intergenic
CTGTAATGGACTCCACTCCA+TGG 0.591766 2_3:-15158252 Msa0280460:three_prime_UTR
TTGCATTCCACCCATTGATG+CGG 0.592076 2_3:+15162488 None:intergenic
ACCCGGAGGATAAGGATGAT+GGG 0.595387 2_3:-15162792 Msa0280460:CDS
GGATTTGGTTAAGTGTGATG+GGG 0.597341 2_3:-15163085 Msa0280460:CDS
GACAAATTCATTAACATACA+AGG 0.597805 2_3:-15161413 Msa0280460:CDS
CATCAATGGGTGGAATGCAA+AGG 0.598600 2_3:-15162485 Msa0280460:CDS
TATGGTTTATAAGTTTCATG+AGG 0.599066 2_3:-15163682 Msa0280460:CDS
AGTTTCATGAGGATGAGCAT+GGG 0.599146 2_3:-15163671 Msa0280460:CDS
ATGGCGAAATAAATCAGGTA+GGG 0.599896 2_3:+15158123 None:intergenic
GGCAGTTACTTTCAGTACAG+AGG 0.601875 2_3:+15158197 None:intergenic
GCTCTAACTACAGATAAGGA+AGG 0.603234 2_3:+15158089 None:intergenic
GCAAATAATTGTGTATGCCA+AGG 0.604340 2_3:-15158152 Msa0280460:three_prime_UTR
GAGAGTGTTAGAGAATTGAC+TGG 0.605352 2_3:-15163717 Msa0280460:CDS
GAGAACGCACGTGATATGCT+TGG 0.606749 2_3:-15164113 Msa0280460:CDS
TCTACCCAACCATCTGGAGA+TGG 0.608343 2_3:+15159554 None:intergenic
CTTCCTTAAACGAGTCTCGT+AGG 0.609302 2_3:+15162659 None:intergenic
AACGGCAAATATGGGAGCAG+TGG 0.610002 2_3:+15162522 None:intergenic
GGATTCATTCTAGATCTACT+GGG 0.610800 2_3:-15163929 Msa0280460:CDS
TTTGGAGCCTGCAAGATCTG+AGG 0.611072 2_3:-15163856 Msa0280460:CDS
GAATAAAACAAATTTCAGAT+GGG 0.612225 2_3:-15159514 Msa0280460:CDS
CCAGTCTTAGTAAATGTGGA+AGG 0.613677 2_3:-15159357 Msa0280460:intron
CTCAGTATATGGCGAATATG+GGG 0.613946 2_3:-15163425 Msa0280460:CDS
ATTAATGGGAATGATGAAGA+CGG 0.614155 2_3:-15163372 Msa0280460:CDS
TCGGTCGGGGTAACACCCAA+CGG 0.614963 2_3:+15163033 None:intergenic
GATGGCGAAATAAATCAGGT+AGG 0.615828 2_3:+15158122 None:intergenic
TAAGACTGGATTTGAACCCA+AGG 0.615883 2_3:+15159371 None:intergenic
GGTGAATGCTTGCTCCAGCA+AGG 0.616372 2_3:-15161504 Msa0280460:CDS
ACAGAGGATAATGCTGGAGA+CGG 0.616712 2_3:+15158213 None:intergenic
CTCTAACTACAGATAAGGAA+GGG 0.617977 2_3:+15158090 None:intergenic
GAAGAGCCGTAGTATGCAGT+GGG 0.619503 2_3:-15162722 Msa0280460:CDS
AAAATGGCTTCAACTAGTAG+AGG 0.619765 2_3:-15164470 Msa0280460:CDS
ATGGCAGAACTAGAGTTGCA+AGG 0.619833 2_3:-15162598 Msa0280460:CDS
ATTGACGGGACTTCTGGTAG+AGG 0.621423 2_3:-15162455 Msa0280460:CDS
GTAAAGCGTATGCCACTCAA+GGG 0.622110 2_3:+15160921 None:intergenic
CCTTATTTGAGACTCGGTCG+GGG 0.625787 2_3:+15163020 None:intergenic
TGTAATTGGAAAACTGTTGG+TGG 0.626201 2_3:-15161264 Msa0280460:CDS
CAGCTTCAATCACTTCCTGG+TGG 0.627911 2_3:-15163771 Msa0280460:CDS
GGATGCTGTAGTAAGACGGA+TGG 0.627982 2_3:+15164253 None:intergenic
AGATGTAATTGGAAAACTGT+TGG 0.627994 2_3:-15161267 Msa0280460:CDS
ATGGCTTCAACTAGTAGAGG+AGG 0.628990 2_3:-15164467 Msa0280460:CDS
GAAGTAAAGAATCCCTTGAG+TGG 0.629207 2_3:-15160933 Msa0280460:CDS
GTCTCGTAGGATAAGCTGCA+AGG 0.629777 2_3:+15162672 None:intergenic
GATGCAGTTCAGTCCAACCA+TGG 0.631362 2_3:+15158235 None:intergenic
AGTATGTCAGGGAGGCAGAA+CGG 0.631400 2_3:-15158699 Msa0280460:CDS
AAGGAAGGGATGTACAGTGA+TGG 0.634624 2_3:+15158104 None:intergenic
GTACCGGAAGAAATTCTATG+AGG 0.634758 2_3:-15163335 Msa0280460:CDS
TTAATATAGGTACCGATGTG+AGG 0.635037 2_3:-15164031 Msa0280460:CDS
TCATCATCGTCCTCAAGTGA+AGG 0.635972 2_3:+15164071 None:intergenic
GGCTGATGCTGGTTATCCCG+GGG 0.637358 2_3:-15162935 Msa0280460:CDS
CTTGTTCAGTACAACATGAG+AGG 0.638302 2_3:-15158408 Msa0280460:three_prime_UTR
GTTGAATAAAACCGCCACGT+TGG 0.639029 2_3:+15164192 None:intergenic
GTACGGATGCTGTAGTAAGA+CGG 0.641187 2_3:+15164249 None:intergenic
TTATGTGGATGAAAATAGAA+GGG 0.642158 2_3:+15164532 None:intergenic
TGAAGAGCCGTAGTATGCAG+TGG 0.642940 2_3:-15162723 Msa0280460:CDS
AAATGAGGACGTTTGGCCCG+GGG 0.644552 2_3:-15161553 Msa0280460:CDS
CTCACAGAGTAGCAGTGAGT+GGG 0.645307 2_3:+15158000 None:intergenic
TGGCGAAGTCCAGTATGTCA+GGG 0.646664 2_3:-15158710 Msa0280460:CDS
TCAATGGCCGCATCAATGGG+TGG 0.647073 2_3:-15162495 Msa0280460:CDS
ACTCACAGAGTAGCAGTGAG+TGG 0.648090 2_3:+15157999 None:intergenic
CGTGCACCTTCATGGCCAAG+TGG 0.651950 2_3:-15158315 Msa0280460:three_prime_UTR
GTAATTGGAAAACTGTTGGT+GGG 0.653634 2_3:-15161263 Msa0280460:CDS
CATGTTCCATAACAGTAAGT+GGG 0.655307 2_3:-15158788 Msa0280460:CDS
TCAATCGGTACCTTCACTTG+AGG 0.657603 2_3:-15164081 Msa0280460:CDS
GTTTCATGAGGATGAGCATG+GGG 0.660547 2_3:-15163670 Msa0280460:CDS
TTCTTGAACTACCTGTGACG+CGG 0.663434 2_3:-15158660 Msa0280460:CDS
GATGCGGCCATTGACATCAA+CGG 0.668715 2_3:+15162504 None:intergenic
AGTTCAGTCCAACCATGGAG+TGG 0.671613 2_3:+15158240 None:intergenic
GCAAAAGAGATTAAATGGGG+TGG 0.673050 2_3:-15162826 Msa0280460:CDS
ATGTCTTGAATCAATTCAGG+CGG 0.675004 2_3:+15158808 None:intergenic
ATGGCGTTGAGAAATTGAGG+AGG 0.678261 2_3:+15164427 None:intergenic
GGTACCTATATTAAAACCTG+AGG 0.685576 2_3:+15164040 None:intergenic
TCAGGCGGAAGACCTTCACC+AGG 0.689959 2_3:+15158823 None:intergenic
GGCAGAACTAGAGTTGCAAG+GGG 0.691700 2_3:-15162596 Msa0280460:CDS
AAATAAGGGATATTATAGAG+TGG 0.691719 2_3:-15163005 Msa0280460:CDS
GTGCACCTTCATGGCCAAGT+GGG 0.699458 2_3:-15158314 Msa0280460:three_prime_UTR
AGAAATTCTATGAGGCTTTG+GGG 0.705305 2_3:-15163327 Msa0280460:CDS
CTCTGAGTAACAATCCCAGT+AGG 0.705488 2_3:+15163120 None:intergenic
AAAACCTTAACATCACCACC+AGG 0.705629 2_3:+15163756 None:intergenic
GGTTGATGAACTGAGTTCTG+TGG 0.705926 2_3:-15162575 Msa0280460:CDS
CGGATTGTTCGAAAACGGCG+TGG 0.709630 2_3:+15164300 None:intergenic
TTCTGGTAGAGGATGCTATG+GGG 0.712651 2_3:-15162444 Msa0280460:CDS
CGAAGTCCAGTATGTCAGGG+AGG 0.717565 2_3:-15158707 Msa0280460:CDS
ACGGCAAAAGAGATTAAATG+GGG 0.723663 2_3:-15162829 Msa0280460:CDS
TTAGCCAAAATCCAACGTGG+CGG 0.723858 2_3:-15164203 Msa0280460:CDS
TGGTGCAAAGCATCACCCGG+AGG 0.732735 2_3:-15162806 Msa0280460:CDS
TCGCTTCTCCAACGACTGCG+CGG 0.734360 2_3:+15163191 None:intergenic
TACTGAGCATGACAACCATG+AGG 0.748811 2_3:+15163441 None:intergenic
AATGCTATGGAAAAGCTCAG+CGG 0.756066 2_3:-15161302 Msa0280460:CDS
AAGGCCTTGAAGGAAGAACG+AGG 0.768118 2_3:+15162757 None:intergenic
TACTTAGCCAAAATCCAACG+TGG 0.768560 2_3:-15164206 Msa0280460:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAATAATAATAGCATAA+GGG + chr2_3:15162272-15162291 None:intergenic 10.0%
!! ATAATAATAATAATAGCATA+AGG + chr2_3:15162273-15162292 None:intergenic 10.0%
!!! ATTTCTTTTCTTTTTTATTT+AGG - chr2_3:15162728-15162747 Msa0280460:CDS 10.0%
!!! TAAAATGAATATTTTCTCTT+TGG - chr2_3:15160694-15160713 Msa0280460:intron 15.0%
!! GATTATACAAATAATATAGT+TGG - chr2_3:15161027-15161046 Msa0280460:CDS 15.0%
!!! AATTTTAGAGTTATATAATC+TGG - chr2_3:15161786-15161805 Msa0280460:intron 15.0%
!! TATTTGAGGAAAAATAATAA+TGG + chr2_3:15163075-15163094 None:intergenic 15.0%
!! TTATATTGTTAACAAGTATT+TGG + chr2_3:15163377-15163396 None:intergenic 15.0%
!!! ATTTTAAAGTATTTTGTATG+TGG - chr2_3:15163453-15163472 Msa0280460:CDS 15.0%
!!! TTTTAAAGTATTTTGTATGT+GGG - chr2_3:15163454-15163473 Msa0280460:CDS 15.0%
!! AAGATTATAAAGTTAATGAA+TGG - chr2_3:15163779-15163798 Msa0280460:CDS 15.0%
!! AAGCTTAAAAAATGTTAATT+AGG - chr2_3:15163874-15163893 Msa0280460:CDS 15.0%
!!! TAGTAGAATTTTATGTAATT+GGG + chr2_3:15164047-15164066 None:intergenic 15.0%
!! AGGTATTCTTTCTAAATTTA+TGG - chr2_3:15160162-15160181 Msa0280460:intron 20.0%
!! TATTAGAAAAAATTGCTTTG+AGG + chr2_3:15160358-15160377 None:intergenic 20.0%
!! TCTAGTAAAAAGTAAGATAT+TGG - chr2_3:15160862-15160881 Msa0280460:CDS 20.0%
!!! ACTTGAATTTAATTTAGTAC+AGG - chr2_3:15160907-15160926 Msa0280460:CDS 20.0%
!! AGCAAATGTTAAAGATAATA+CGG - chr2_3:15161685-15161704 Msa0280460:intron 20.0%
!!! AATATTTTGATTGTTCTAGA+AGG - chr2_3:15161762-15161781 Msa0280460:intron 20.0%
!!! ACTCCAGATTTTAAAATAAA+TGG - chr2_3:15161898-15161917 Msa0280460:intron 20.0%
!!! GTACCATTTATTTTAAAATC+TGG + chr2_3:15161904-15161923 None:intergenic 20.0%
!! AAACATACATGATTAAAACA+CGG + chr2_3:15162154-15162173 None:intergenic 20.0%
!!! TCTGAAATTTGTTTTATTCT+TGG + chr2_3:15162994-15163013 None:intergenic 20.0%
!! AGAATAAAACAAATTTCAGA+TGG - chr2_3:15162994-15163013 Msa0280460:CDS 20.0%
!! GAATAAAACAAATTTCAGAT+GGG - chr2_3:15162995-15163014 Msa0280460:CDS 20.0%
!!! TAATAATGGAAATGATTTGA+AGG + chr2_3:15163061-15163080 None:intergenic 20.0%
!!! ATTATTTTTCCTCAAATAAG+TGG - chr2_3:15163077-15163096 Msa0280460:CDS 20.0%
!! AGATTATTGCACAATAATAA+GGG + chr2_3:15163571-15163590 None:intergenic 20.0%
!! ATGATAATTCTATGGTATTT+GGG + chr2_3:15163594-15163613 None:intergenic 20.0%
!! AATGATAATTCTATGGTATT+TGG + chr2_3:15163595-15163614 None:intergenic 20.0%
!! AAATACCATAGAATTATCAT+TGG - chr2_3:15163594-15163613 Msa0280460:CDS 20.0%
!! AAATACCAATGATAATTCTA+TGG + chr2_3:15163602-15163621 None:intergenic 20.0%
!! AAATAAAACACTGTTAGATA+TGG + chr2_3:15163638-15163657 None:intergenic 20.0%
!!! ATTTCCATTTTTTATTGTGA+AGG - chr2_3:15163654-15163673 Msa0280460:CDS 20.0%
!!! CTAGTAGAATTTTATGTAAT+TGG + chr2_3:15164048-15164067 None:intergenic 20.0%
!!! AAATTTTCCTGATAATGTTA+TGG - chr2_3:15164154-15164173 Msa0280460:CDS 20.0%
! TTATGTGGATGAAAATAGAA+GGG + chr2_3:15157980-15157999 None:intergenic 25.0%
! TTTATGTGGATGAAAATAGA+AGG + chr2_3:15157981-15158000 None:intergenic 25.0%
! TGAAAGAGAAAAATGAAAAG+TGG + chr2_3:15158007-15158026 None:intergenic 25.0%
! TTCATCTTCAAAACACAAAA+TGG - chr2_3:15158023-15158042 Msa0280460:three_prime_UTR 25.0%
!!! TTAGTCTTATGAATCCTATT+TGG - chr2_3:15158559-15158578 Msa0280460:three_prime_UTR 25.0%
! CTATGAAGAATACCATAAAA+AGG + chr2_3:15158609-15158628 None:intergenic 25.0%
!! CTTTTTATGGTATTCTTCAT+AGG - chr2_3:15158607-15158626 Msa0280460:three_prime_UTR 25.0%
! TATGGTTTATAAGTTTCATG+AGG - chr2_3:15158827-15158846 Msa0280460:CDS 25.0%
!!! GTTTTTGTTTAAGCAGAATA+GGG - chr2_3:15158947-15158966 Msa0280460:intron 25.0%
! CTATGGCTGTTATTATTAAT+GGG - chr2_3:15159123-15159142 Msa0280460:intron 25.0%
! TTAACCAAATCCATAATACT+AGG + chr2_3:15159416-15159435 None:intergenic 25.0%
! AAATAAGGGATATTATAGAG+TGG - chr2_3:15159504-15159523 Msa0280460:CDS 25.0%
! AACTCCGAATAAACAATTAT+TGG - chr2_3:15160219-15160238 Msa0280460:intron 25.0%
! ACTCCGAATAAACAATTATT+GGG - chr2_3:15160220-15160239 Msa0280460:intron 25.0%
! CTTCCCAATAATTGTTTATT+CGG + chr2_3:15160226-15160245 None:intergenic 25.0%
! TTTGTTAATTACAGATAGGA+AGG + chr2_3:15160279-15160298 None:intergenic 25.0%
!! CATGTTTGTTAATTACAGAT+AGG + chr2_3:15160283-15160302 None:intergenic 25.0%
! TCTGTAATTAACAAACATGA+TGG - chr2_3:15160284-15160303 Msa0280460:intron 25.0%
! CTGTAATTAACAAACATGAT+GGG - chr2_3:15160285-15160304 Msa0280460:intron 25.0%
! AGAAATATATGCCCAAATTT+CGG + chr2_3:15160477-15160496 None:intergenic 25.0%
! CATGCTTATAAAAATGGAAA+AGG - chr2_3:15160512-15160531 Msa0280460:intron 25.0%
!!! ATGGTTTTTAACTGAAGTTA+GGG + chr2_3:15160721-15160740 None:intergenic 25.0%
!!! AATGGTTTTTAACTGAAGTT+AGG + chr2_3:15160722-15160741 None:intergenic 25.0%
!! AAAAGTAAGATATTGGTAAC+TGG - chr2_3:15160869-15160888 Msa0280460:CDS 25.0%
!! AAATAAGGCAGTTTTTATAG+TGG - chr2_3:15160984-15161003 Msa0280460:CDS 25.0%
! ATTATTTGTATAATCCTTGC+TGG + chr2_3:15161022-15161041 None:intergenic 25.0%
! GACAAATTCATTAACATACA+AGG - chr2_3:15161096-15161115 Msa0280460:CDS 25.0%
! GCAAATGTTAAAGATAATAC+GGG - chr2_3:15161686-15161705 Msa0280460:intron 25.0%
! TGAATGATACTGGATTTATA+TGG + chr2_3:15161812-15161831 None:intergenic 25.0%
! AAATAAATGGTACTTTCACA+TGG - chr2_3:15161911-15161930 Msa0280460:intron 25.0%
! AATAAATGGTACTTTCACAT+GGG - chr2_3:15161912-15161931 Msa0280460:intron 25.0%
! AAATCATAAACATCTAGTGT+TGG + chr2_3:15162019-15162038 None:intergenic 25.0%
!!! GATGTTTATGATTTGTTTGT+CGG - chr2_3:15162025-15162044 Msa0280460:intron 25.0%
! AAACATTTCTCAAACCAAAT+AGG + chr2_3:15162087-15162106 None:intergenic 25.0%
! TAAGGTAAATTTCACACTTT+GGG + chr2_3:15162307-15162326 None:intergenic 25.0%
! ATAAGGTAAATTTCACACTT+TGG + chr2_3:15162308-15162327 None:intergenic 25.0%
! TTCTTCTAAGTAAGTTTAGA+AGG + chr2_3:15162694-15162713 None:intergenic 25.0%
! TTCTAAACTTACTTAGAAGA+AGG - chr2_3:15162693-15162712 Msa0280460:CDS 25.0%
!!! TTCTTTTTTATTTAGGTCTC+TGG - chr2_3:15162735-15162754 Msa0280460:CDS 25.0%
! TAATTTATATTCCACACTGA+GGG + chr2_3:15163337-15163356 None:intergenic 25.0%
! ATAATTTATATTCCACACTG+AGG + chr2_3:15163338-15163357 None:intergenic 25.0%
! GTGTGGAATATAAATTATGA+CGG - chr2_3:15163340-15163359 Msa0280460:CDS 25.0%
! TTGTTAACAAGTATTTGGAT+CGG + chr2_3:15163372-15163391 None:intergenic 25.0%
! ACGTGTATTATTATTGATAC+AGG + chr2_3:15163543-15163562 None:intergenic 25.0%
! GAGATTATTGCACAATAATA+AGG + chr2_3:15163572-15163591 None:intergenic 25.0%
! AACATTATCAGGAAAATTTC+AGG + chr2_3:15164153-15164172 None:intergenic 25.0%
! AACTAGGAAAAACATGATAT+AGG + chr2_3:15164336-15164355 None:intergenic 25.0%
! TACACAATTATTTGCAAACT+AGG + chr2_3:15164352-15164371 None:intergenic 25.0%
! CATTGATAAATGAAAGTAGA+TGG - chr2_3:15164547-15164566 Msa0280460:five_prime_UTR 25.0%
ATGAAAAGTGGTTGTTTATG+TGG + chr2_3:15157995-15158014 None:intergenic 30.0%
! TTGTAGTGATTTGAAGTTGA+TGG + chr2_3:15158104-15158123 None:intergenic 30.0%
! GATCTAGAATGAATCCAAAT+AGG + chr2_3:15158576-15158595 None:intergenic 30.0%
ATTCTTCATAGGATTGATGT+TGG - chr2_3:15158618-15158637 Msa0280460:exon 30.0%
! AGAATTGACTGGTTATGATA+GGG - chr2_3:15158803-15158822 Msa0280460:CDS 30.0%
!! GGTTTTTGTTTAAGCAGAAT+AGG - chr2_3:15158946-15158965 Msa0280460:intron 30.0%
GCTATGGCTGTTATTATTAA+TGG - chr2_3:15159122-15159141 Msa0280460:intron 30.0%
ATTAATGGGAATGATGAAGA+CGG - chr2_3:15159137-15159156 Msa0280460:intron 30.0%
AAGAAATTCTATGAGGCTTT+GGG - chr2_3:15159181-15159200 Msa0280460:intron 30.0%
! AATATCCCTTATTTGAGACT+CGG + chr2_3:15159498-15159517 None:intergenic 30.0%
! CTGAAAAGGATTTTCTTTTC+TGG - chr2_3:15159645-15159664 Msa0280460:CDS 30.0%
ATACGGCAAAAGAGATTAAA+TGG - chr2_3:15159678-15159697 Msa0280460:CDS 30.0%
TACGGCAAAAGAGATTAAAT+GGG - chr2_3:15159679-15159698 Msa0280460:CDS 30.0%
GACAAATAAACCCAATGAAT+TGG + chr2_3:15160195-15160214 None:intergenic 30.0%
!! ATTAACAAACATGATGGGTA+AGG - chr2_3:15160290-15160309 Msa0280460:intron 30.0%
ATTCAGTAATGACCGAAATT+TGG - chr2_3:15160462-15160481 Msa0280460:intron 30.0%
TTCAGTAATGACCGAAATTT+GGG - chr2_3:15160463-15160482 Msa0280460:intron 30.0%
! ATATTTCTACTGTGTAACCA+TGG - chr2_3:15160489-15160508 Msa0280460:intron 30.0%
TAAATCACCTTACACTTGTT+CGG - chr2_3:15160643-15160662 Msa0280460:intron 30.0%
AAAGAGTAGGTGGATAATAT+AGG + chr2_3:15160770-15160789 None:intergenic 30.0%
AATCTGCTTGAATAAAGAGT+AGG + chr2_3:15160783-15160802 None:intergenic 30.0%
AGAATGTTGAGATGAAAATG+AGG - chr2_3:15160941-15160960 Msa0280460:CDS 30.0%
TACTGGTCAAAAAGTTGTAA+TGG - chr2_3:15161074-15161093 Msa0280460:CDS 30.0%
TTATCATCCGATGCAAAAAT+GGG + chr2_3:15161165-15161184 None:intergenic 30.0%
! GTTTTCCAATTACATCTGTA+CGG + chr2_3:15161239-15161258 None:intergenic 30.0%
AGATGTAATTGGAAAACTGT+TGG - chr2_3:15161242-15161261 Msa0280460:CDS 30.0%
!! TTCCATTTTCATTTGTTGAC+AGG - chr2_3:15161370-15161389 Msa0280460:CDS 30.0%
TTTCTTGACTGCAAATAAGA+GGG - chr2_3:15161413-15161432 Msa0280460:CDS 30.0%
!!! TACATGGTTATTTTGGTTCT+AGG + chr2_3:15161981-15162000 None:intergenic 30.0%
! ACAGCTTTACATGGTTATTT+TGG + chr2_3:15161988-15162007 None:intergenic 30.0%
GAAATAATCACAGCTTTACA+TGG + chr2_3:15161997-15162016 None:intergenic 30.0%
GGATATTCTTACACATATAG+TGG - chr2_3:15162046-15162065 Msa0280460:intron 30.0%
CTAAAATTCGAAACAGGAAA+TGG + chr2_3:15162117-15162136 None:intergenic 30.0%
GTGTAACTAAAATTCGAAAC+AGG + chr2_3:15162123-15162142 None:intergenic 30.0%
GTTAGATGAACGATATGAAA+AGG + chr2_3:15162207-15162226 None:intergenic 30.0%
!! TGCTGTTTGTTATCAAATCA+AGG + chr2_3:15162416-15162435 None:intergenic 30.0%
GTTATCAATCATGTAAAACC+AGG + chr2_3:15162480-15162499 None:intergenic 30.0%
TTTACATATGTAGTTCCTTC+TGG - chr2_3:15162518-15162537 Msa0280460:CDS 30.0%
TTAGCAAAGTATGGTAAACA+GGG + chr2_3:15162603-15162622 None:intergenic 30.0%
ATTAGCAAAGTATGGTAAAC+AGG + chr2_3:15162604-15162623 None:intergenic 30.0%
GTTTACCATACTTTGCTAAT+TGG - chr2_3:15162604-15162623 Msa0280460:CDS 30.0%
ATCAACCAATTAGCAAAGTA+TGG + chr2_3:15162612-15162631 None:intergenic 30.0%
TTAGAAGGACATTAAAGCAA+GGG + chr2_3:15162679-15162698 None:intergenic 30.0%
TTTAGAAGGACATTAAAGCA+AGG + chr2_3:15162680-15162699 None:intergenic 30.0%
CTCTTAGCAATAACATTACT+TGG + chr2_3:15162813-15162832 None:intergenic 30.0%
AAATCCAGTCTTAGTAAATG+TGG - chr2_3:15163148-15163167 Msa0280460:CDS 30.0%
TTATTGGGCAAAATCAATGT+GGG - chr2_3:15163213-15163232 Msa0280460:CDS 30.0%
AATTTATATTCCACACTGAG+GGG + chr2_3:15163336-15163355 None:intergenic 30.0%
TGTTAACAAGTATTTGGATC+GGG + chr2_3:15163371-15163390 None:intergenic 30.0%
!! TGTTGAAGAGAAGTTTTGAT+GGG + chr2_3:15163403-15163422 None:intergenic 30.0%
!! TTGTTGAAGAGAAGTTTTGA+TGG + chr2_3:15163404-15163423 None:intergenic 30.0%
CAAATATCACATGATCATAC+TGG + chr2_3:15163430-15163449 None:intergenic 30.0%
!! AAAGTATTTTGTATGTGGGT+TGG - chr2_3:15163458-15163477 Msa0280460:CDS 30.0%
CCATCCTTCACAATAAAAAA+TGG + chr2_3:15163661-15163680 None:intergenic 30.0%
!!! CCATTTTTTATTGTGAAGGA+TGG - chr2_3:15163658-15163677 Msa0280460:CDS 30.0%
AACATGTCTTGAATCAATTC+AGG + chr2_3:15163707-15163726 None:intergenic 30.0%
AATGGTCAACATGAGTAATA+GGG + chr2_3:15163930-15163949 None:intergenic 30.0%
TAATGGTCAACATGAGTAAT+AGG + chr2_3:15163931-15163950 None:intergenic 30.0%
AATGGCAACAAACTATCTAA+TGG + chr2_3:15163948-15163967 None:intergenic 30.0%
GTGCAAAACAACAATCTAAT+TGG + chr2_3:15164071-15164090 None:intergenic 30.0%
! ATTTTCTTGAAATTTGTCGC+TGG + chr2_3:15164224-15164243 None:intergenic 30.0%
! CTAGGTTATCATGTAGTTTT+TGG - chr2_3:15164442-15164461 Msa0280460:CDS 30.0%
AATAGAAGGGTGAAAGTGAA+GGG + chr2_3:15157967-15157986 None:intergenic 35.0%
AAATAGAAGGGTGAAAGTGA+AGG + chr2_3:15157968-15157987 None:intergenic 35.0%
AAAATGGCTTCAACTAGTAG+AGG - chr2_3:15158039-15158058 Msa0280460:three_prime_UTR 35.0%
!! TCGTCCTCAGGTTTTAATAT+AGG - chr2_3:15158465-15158484 Msa0280460:three_prime_UTR 35.0%
GGTACCTATATTAAAACCTG+AGG + chr2_3:15158472-15158491 None:intergenic 35.0%
!! TTAATATAGGTACCGATGTG+AGG - chr2_3:15158478-15158497 Msa0280460:three_prime_UTR 35.0%
!!! TCGCTTTTTACTCATTCTAG+TGG - chr2_3:15158501-15158520 Msa0280460:three_prime_UTR 35.0%
TTTACTAGAGAAAGCCTTCT+CGG - chr2_3:15158527-15158546 Msa0280460:three_prime_UTR 35.0%
TGGATTCATTCTAGATCTAC+TGG - chr2_3:15158579-15158598 Msa0280460:three_prime_UTR 35.0%
GGATTCATTCTAGATCTACT+GGG - chr2_3:15158580-15158599 Msa0280460:three_prime_UTR 35.0%
!! TGTTGGTGTTGTCATTGATT+TGG - chr2_3:15158635-15158654 Msa0280460:exon 35.0%
AAGTGATTGAAGCTGAGAAA+TGG + chr2_3:15158733-15158752 None:intergenic 35.0%
! GAGAATTGACTGGTTATGAT+AGG - chr2_3:15158802-15158821 Msa0280460:CDS 35.0%
TGAGAGTAAGAGGATTGATT+TGG - chr2_3:15158872-15158891 Msa0280460:intron 35.0%
!! ATTGATTTGGAGCCGTATAT+GGG - chr2_3:15158885-15158904 Msa0280460:intron 35.0%
GGATAATGCAAACCCATATA+CGG + chr2_3:15158900-15158919 None:intergenic 35.0%
TGTTTAAGCAGAATAGGGTT+AGG - chr2_3:15158952-15158971 Msa0280460:intron 35.0%
ATTGTAATGCTTCTCCTGTT+AGG - chr2_3:15158985-15159004 Msa0280460:intron 35.0%
TTGTAATGCTTCTCCTGTTA+GGG - chr2_3:15158986-15159005 Msa0280460:intron 35.0%
AAGCCTCATAGAATTTCTTC+CGG + chr2_3:15159180-15159199 None:intergenic 35.0%
GAAGAAATTCTATGAGGCTT+TGG - chr2_3:15159180-15159199 Msa0280460:intron 35.0%
AGAAATTCTATGAGGCTTTG+GGG - chr2_3:15159182-15159201 Msa0280460:intron 35.0%
TTTGTCATCATACTTCTGCT+AGG - chr2_3:15159213-15159232 Msa0280460:intron 35.0%
! AGTTTCTAATGCAGGCTTTT+GGG - chr2_3:15159267-15159286 Msa0280460:intron 35.0%
! TTTTGGGCTTCAGTTGAATA+TGG - chr2_3:15159283-15159302 Msa0280460:intron 35.0%
! TGTTGTGTGATATGTTGCTT+AGG - chr2_3:15159360-15159379 Msa0280460:CDS 35.0%
! GTTGTGTGATATGTTGCTTA+GGG - chr2_3:15159361-15159380 Msa0280460:CDS 35.0%
TACTCAGAGTCCTAGTATTA+TGG - chr2_3:15159403-15159422 Msa0280460:intron 35.0%
GAGTCCTAGTATTATGGATT+TGG - chr2_3:15159409-15159428 Msa0280460:intron 35.0%
! ATGGATTTGGTTAAGTGTGA+TGG - chr2_3:15159422-15159441 Msa0280460:intron 35.0%
! TGGATTTGGTTAAGTGTGAT+GGG - chr2_3:15159423-15159442 Msa0280460:intron 35.0%
GGATATTATAGAGTGGTTGT+TGG - chr2_3:15159511-15159530 Msa0280460:CDS 35.0%
TGTTGCGTATATCACTGAAA+AGG - chr2_3:15159631-15159650 Msa0280460:CDS 35.0%
ACGGCAAAAGAGATTAAATG+GGG - chr2_3:15159680-15159699 Msa0280460:CDS 35.0%
AGCTGAGAATAACGATTCAA+AGG - chr2_3:15159871-15159890 Msa0280460:intron 35.0%
TTGACATCAACGGCAAATAT+GGG + chr2_3:15159998-15160017 None:intergenic 35.0%
ATTGACATCAACGGCAAATA+TGG + chr2_3:15159999-15160018 None:intergenic 35.0%
ATATTTGCCGTTGATGTCAA+TGG - chr2_3:15159998-15160017 Msa0280460:intron 35.0%
TGCAAAGGTTTCTGAATTGA+CGG - chr2_3:15160039-15160058 Msa0280460:intron 35.0%
GCTTCATGATCTTGTGTATA+AGG - chr2_3:15160096-15160115 Msa0280460:intron 35.0%
! CTTCTTTCTCATGCTTTGAA+AGG - chr2_3:15160142-15160161 Msa0280460:intron 35.0%
ATAAACCCAATGAATTGGCA+TGG + chr2_3:15160190-15160209 None:intergenic 35.0%
ATTGTGCATTCATTTGTGGT+CGG + chr2_3:15160407-15160426 None:intergenic 35.0%
CATGATTGTGCATTCATTTG+TGG + chr2_3:15160411-15160430 None:intergenic 35.0%
ATTGTCTAAGTCGTAGTCAT+TGG - chr2_3:15160437-15160456 Msa0280460:intron 35.0%
!! CCATTTTTATAAGCATGCCA+TGG + chr2_3:15160509-15160528 None:intergenic 35.0%
CCATGGCATGCTTATAAAAA+TGG - chr2_3:15160506-15160525 Msa0280460:intron 35.0%
TGTTATACCGAACAAGTGTA+AGG + chr2_3:15160653-15160672 None:intergenic 35.0%
TAATATAGGTCAGTCAAAGG+TGG + chr2_3:15160756-15160775 None:intergenic 35.0%
GGATAATATAGGTCAGTCAA+AGG + chr2_3:15160759-15160778 None:intergenic 35.0%
ACAAGACATTCTATAGCAGT+AGG + chr2_3:15160837-15160856 None:intergenic 35.0%
! CTGCTATAGAATGTCTTGTT+TGG - chr2_3:15160838-15160857 Msa0280460:CDS 35.0%
! AGTAAGATATTGGTAACTGG+TGG - chr2_3:15160872-15160891 Msa0280460:CDS 35.0%
TAACATACAAGGTGACTACA+AGG - chr2_3:15161107-15161126 Msa0280460:CDS 35.0%
GTTATCATCCGATGCAAAAA+TGG + chr2_3:15161166-15161185 None:intergenic 35.0%
! ATAACACATGTTGCTTAGAG+TGG - chr2_3:15161181-15161200 Msa0280460:CDS 35.0%
TGTAATTGGAAAACTGTTGG+TGG - chr2_3:15161245-15161264 Msa0280460:CDS 35.0%
GTAATTGGAAAACTGTTGGT+GGG - chr2_3:15161246-15161265 Msa0280460:CDS 35.0%
TGCCTGTCAACAAATGAAAA+TGG + chr2_3:15161375-15161394 None:intergenic 35.0%
!! TTTTCATTTGTTGACAGGCA+TGG - chr2_3:15161375-15161394 Msa0280460:CDS 35.0%
CTTTCTTGACTGCAAATAAG+AGG - chr2_3:15161412-15161431 Msa0280460:CDS 35.0%
TGCAAATAAGAGGGTTAACA+TGG - chr2_3:15161422-15161441 Msa0280460:CDS 35.0%
AATAAGAGGGTTAACATGGA+TGG - chr2_3:15161426-15161445 Msa0280460:CDS 35.0%
! ATATAGTGGAAGAATACCAC+AGG - chr2_3:15162060-15162079 Msa0280460:intron 35.0%
!! TTTTAGAAGCTCTTTCTGAC+TGG - chr2_3:15162350-15162369 Msa0280460:intron 35.0%
!!! CAGGTATTTTAATAGCGCTA+CGG + chr2_3:15162461-15162480 None:intergenic 35.0%
AAAAGGACACAAAACATGAG+AGG + chr2_3:15162635-15162654 None:intergenic 35.0%
CGCTGAAGATAACATAGAAA+AGG + chr2_3:15162652-15162671 None:intergenic 35.0%
AGCCAATGTCTTGATTTCTT+CGG + chr2_3:15162866-15162885 None:intergenic 35.0%
! ATCAAGACATTGGCTGTTTA+TGG - chr2_3:15162871-15162890 Msa0280460:CDS 35.0%
CTGTTTATGGTGATCAATTG+AGG - chr2_3:15162884-15162903 Msa0280460:CDS 35.0%
ATTGAGGATTCAACAAGTCT+TGG - chr2_3:15162900-15162919 Msa0280460:CDS 35.0%
GGCAGATTTCTTAATGAATG+TGG - chr2_3:15162921-15162940 Msa0280460:CDS 35.0%
AAGTGTACACCACTTATTTG+AGG + chr2_3:15163089-15163108 None:intergenic 35.0%
TACAGCCTTTATAAGAACCT+TGG - chr2_3:15163121-15163140 Msa0280460:CDS 35.0%
ACAGCCTTTATAAGAACCTT+GGG - chr2_3:15163122-15163141 Msa0280460:CDS 35.0%
TGAACCCAAGGTTCTTATAA+AGG + chr2_3:15163129-15163148 None:intergenic 35.0%
! TGATTTTGCCCAATAAGACA+GGG + chr2_3:15163209-15163228 None:intergenic 35.0%
! TTGATTTTGCCCAATAAGAC+AGG + chr2_3:15163210-15163229 None:intergenic 35.0%
CTTATTGGGCAAAATCAATG+TGG - chr2_3:15163212-15163231 Msa0280460:CDS 35.0%
GAAATAAGTCCCACATAAAG+TGG - chr2_3:15163248-15163267 Msa0280460:CDS 35.0%
GTTAACAAGTATTTGGATCG+GGG + chr2_3:15163370-15163389 None:intergenic 35.0%
!!! ATTTTGTATGTGGGTTGGTT+TGG - chr2_3:15163463-15163482 Msa0280460:CDS 35.0%
!!! TTTTGTATGTGGGTTGGTTT+GGG - chr2_3:15163464-15163483 Msa0280460:CDS 35.0%
ATGTCTTGAATCAATTCAGG+CGG + chr2_3:15163704-15163723 None:intergenic 35.0%
ACATGTTCCATAACAGTAAG+TGG - chr2_3:15163720-15163739 Msa0280460:CDS 35.0%
CATGTTCCATAACAGTAAGT+GGG - chr2_3:15163721-15163740 Msa0280460:CDS 35.0%
TCACCTAACAAGACAACTTA+GGG - chr2_3:15163986-15164005 Msa0280460:CDS 35.0%
ACCATTTGAACAAGCTGATT+CGG - chr2_3:15164013-15164032 Msa0280460:CDS 35.0%
!! GTACTGAACAAGTTTTGTCA+GGG + chr2_3:15164093-15164112 None:intergenic 35.0%
!! TGTACTGAACAAGTTTTGTC+AGG + chr2_3:15164094-15164113 None:intergenic 35.0%
GCAAATAATTGTGTATGCCA+AGG - chr2_3:15164357-15164376 Msa0280460:CDS 35.0%
ATGGCGAAATAAATCAGGTA+GGG + chr2_3:15164389-15164408 None:intergenic 35.0%
CTCTAACTACAGATAAGGAA+GGG + chr2_3:15164422-15164441 None:intergenic 35.0%
ATGAAAGTAGATGGTCACAT+TGG - chr2_3:15164556-15164575 Msa0280460:five_prime_UTR 35.0%
!! TTGATGGCGTTGAGAAATTG+AGG + chr2_3:15158088-15158107 None:intergenic 40.0%
AGTGATCTGTTGTTCAGGTA+CGG + chr2_3:15158280-15158299 None:intergenic 40.0%
TAAGCAGTGATCTGTTGTTC+AGG + chr2_3:15158285-15158304 None:intergenic 40.0%
TACTTAGCCAAAATCCAACG+TGG - chr2_3:15158303-15158322 Msa0280460:three_prime_UTR 40.0%
!!! GGCGGTTTTATTCAACCTTT+TGG - chr2_3:15158324-15158343 Msa0280460:three_prime_UTR 40.0%
ACAGCGATCATTGAACCAAA+AGG + chr2_3:15158342-15158361 None:intergenic 40.0%
GCTTGGTATTACTCCTCAAT+CGG - chr2_3:15158413-15158432 Msa0280460:three_prime_UTR 40.0%
AGTAAAAAGCGACCTCACAT+CGG + chr2_3:15158493-15158512 None:intergenic 40.0%
! TCTACTGGGAAGCCTTTTTA+TGG - chr2_3:15158594-15158613 Msa0280460:three_prime_UTR 40.0%
AAAACCTTAACATCACCACC+AGG + chr2_3:15158756-15158775 None:intergenic 40.0%
!! GAGAGTGTTAGAGAATTGAC+TGG - chr2_3:15158792-15158811 Msa0280460:CDS 40.0%
! GACTGGTTATGATAGGGTTA+TGG - chr2_3:15158809-15158828 Msa0280460:CDS 40.0%
AAGTTTCATGAGGATGAGCA+TGG - chr2_3:15158837-15158856 Msa0280460:intron 40.0%
AGTTTCATGAGGATGAGCAT+GGG - chr2_3:15158838-15158857 Msa0280460:intron 40.0%
AAGTTGTTGCTGAGAGTAAG+AGG - chr2_3:15158862-15158881 Msa0280460:intron 40.0%
!! GATTGATTTGGAGCCGTATA+TGG - chr2_3:15158884-15158903 Msa0280460:intron 40.0%
GAATAGGGTTAGGATGATTG+TGG - chr2_3:15158962-15158981 Msa0280460:intron 40.0%
! TTCTCCTGTTAGGGTTTTTC+AGG - chr2_3:15158995-15159014 Msa0280460:intron 40.0%
TCATCCTGAAAAACCCTAAC+AGG + chr2_3:15159002-15159021 None:intergenic 40.0%
!!! TGTTAGGGTTTTTCAGGATG+AGG - chr2_3:15159001-15159020 Msa0280460:intron 40.0%
TGGTTGTCATGCTCAGTATA+TGG - chr2_3:15159073-15159092 Msa0280460:intron 40.0%
TGCTCAGTATATGGCGAATA+TGG - chr2_3:15159082-15159101 Msa0280460:intron 40.0%
GCTCAGTATATGGCGAATAT+GGG - chr2_3:15159083-15159102 Msa0280460:intron 40.0%
CTCAGTATATGGCGAATATG+GGG - chr2_3:15159084-15159103 Msa0280460:intron 40.0%
GTACCGGAAGAAATTCTATG+AGG - chr2_3:15159174-15159193 Msa0280460:intron 40.0%
! GGTGTATTCCTTTTCCTCTT+AGG - chr2_3:15159234-15159253 Msa0280460:intron 40.0%
CAAGCATACCTAAGAGGAAA+AGG + chr2_3:15159245-15159264 None:intergenic 40.0%
AACTCACAAGCATACCTAAG+AGG + chr2_3:15159251-15159270 None:intergenic 40.0%
TGCTTGTGAGTTTCTAATGC+AGG - chr2_3:15159259-15159278 Msa0280460:intron 40.0%
! GAGTTTCTAATGCAGGCTTT+TGG - chr2_3:15159266-15159285 Msa0280460:intron 40.0%
! GGATTTGGTTAAGTGTGATG+GGG - chr2_3:15159424-15159443 Msa0280460:intron 40.0%
!! GGGTTTGAGTACTGATAGTT+TGG - chr2_3:15159553-15159572 Msa0280460:CDS 40.0%
!! TTTCTGGTTCAGATCGCATA+CGG - chr2_3:15159661-15159680 Msa0280460:CDS 40.0%
GCAAAAGAGATTAAATGGGG+TGG - chr2_3:15159683-15159702 Msa0280460:CDS 40.0%
! CACTTCTAAAAAGGCCTTGA+AGG + chr2_3:15159765-15159784 None:intergenic 40.0%
!! CTTCAAGGCCTTTTTAGAAG+TGG - chr2_3:15159763-15159782 Msa0280460:intron 40.0%
! GCTCTTCACCACTTCTAAAA+AGG + chr2_3:15159774-15159793 None:intergenic 40.0%
TATCCTACGAGACTCGTTTA+AGG - chr2_3:15159847-15159866 Msa0280460:intron 40.0%
!! CAACTCTAGTTCTGCCATAT+GGG + chr2_3:15159909-15159928 None:intergenic 40.0%
GCAAAGGTTTCTGAATTGAC+GGG - chr2_3:15160040-15160059 Msa0280460:intron 40.0%
ATGGTTCCATGCCAATTCAT+TGG - chr2_3:15160181-15160200 Msa0280460:intron 40.0%
TGGTTCCATGCCAATTCATT+GGG - chr2_3:15160182-15160201 Msa0280460:intron 40.0%
TTGTGCATTCATTTGTGGTC+GGG + chr2_3:15160406-15160425 None:intergenic 40.0%
ATCCAATCCAGATGTCATGA+TGG - chr2_3:15160558-15160577 Msa0280460:intron 40.0%
AACCATCATGACATCTGGAT+TGG + chr2_3:15160563-15160582 None:intergenic 40.0%
AATCCAGATGTCATGATGGT+TGG - chr2_3:15160562-15160581 Msa0280460:intron 40.0%
ATCCAGATGTCATGATGGTT+GGG - chr2_3:15160563-15160582 Msa0280460:intron 40.0%
TATGTGGGAAGGTGGAAAAT+TGG - chr2_3:15160615-15160634 Msa0280460:intron 40.0%
ATGTGGGAAGGTGGAAAATT+GGG - chr2_3:15160616-15160635 Msa0280460:intron 40.0%
AAGGTGGAGGAAAGTGAAAA+TGG + chr2_3:15160740-15160759 None:intergenic 40.0%
CTGCTTGAATAAAGAGTAGG+TGG + chr2_3:15160780-15160799 None:intergenic 40.0%
GAGATGAAAATGAGGACGTT+TGG - chr2_3:15160949-15160968 Msa0280460:CDS 40.0%
!!! ACTGCCTTATTTTGATTCCC+CGG + chr2_3:15160976-15160995 None:intergenic 40.0%
ATAGTTGGAGTGTGCTTTGT+TGG - chr2_3:15161042-15161061 Msa0280460:CDS 40.0%
TTTGTTGGTCAGGATGTTAC+TGG - chr2_3:15161057-15161076 Msa0280460:CDS 40.0%
CTTAGAGTGGAACAATGCTA+TGG - chr2_3:15161194-15161213 Msa0280460:CDS 40.0%
AATGCTATGGAAAAGCTCAG+CGG - chr2_3:15161207-15161226 Msa0280460:CDS 40.0%
TGGTAGTTTCTGTCAGTTGA+AGG - chr2_3:15161278-15161297 Msa0280460:CDS 40.0%
GGTAGTTTCTGTCAGTTGAA+GGG - chr2_3:15161279-15161298 Msa0280460:CDS 40.0%
ATTGTCTTGCACAATGCACT+TGG - chr2_3:15161327-15161346 Msa0280460:CDS 40.0%
AACATGGATGGTCAGATCAT+TGG - chr2_3:15161438-15161457 Msa0280460:CDS 40.0%
AACTACTATCCTGTTGTCTC+TGG + chr2_3:15161518-15161537 None:intergenic 40.0%
! AGGATAGTAGTTGCTTTGCT+AGG - chr2_3:15161526-15161545 Msa0280460:CDS 40.0%
GAAGTAAAGAATCCCTTGAG+TGG - chr2_3:15161576-15161595 Msa0280460:CDS 40.0%
ACGCTTTACAAACTCTCTTC+TGG - chr2_3:15161602-15161621 Msa0280460:intron 40.0%
GGCTTTCACATGAATGATAC+TGG + chr2_3:15161822-15161841 None:intergenic 40.0%
TGGTACTTTCACATGGGATT+AGG - chr2_3:15161918-15161937 Msa0280460:intron 40.0%
GGTACTTTCACATGGGATTA+GGG - chr2_3:15161919-15161938 Msa0280460:intron 40.0%
!!! ATTTTGGTTCTAGGACTGTG+CGG + chr2_3:15161972-15161991 None:intergenic 40.0%
AGAATACCACAGGACCTATT+TGG - chr2_3:15162070-15162089 Msa0280460:intron 40.0%
GGTAAATTTCACACTTTGGG+AGG + chr2_3:15162304-15162323 None:intergenic 40.0%
TACCTTATGCAGCAAACACA+AGG - chr2_3:15162320-15162339 Msa0280460:intron 40.0%
! TACCTTGTGTTTGCTGCATA+AGG + chr2_3:15162325-15162344 None:intergenic 40.0%
CGCTACGGATAATCAAGATA+TGG + chr2_3:15162446-15162465 None:intergenic 40.0%
CGTAGCGCTATTAAAATACC+TGG - chr2_3:15162459-15162478 Msa0280460:CDS 40.0%
! ATATGTAGTTCCTTCTGGCT+AGG - chr2_3:15162523-15162542 Msa0280460:CDS 40.0%
TCCCGAAGAAATCAAGACAT+TGG - chr2_3:15162861-15162880 Msa0280460:CDS 40.0%
GCCAATGTCTTGATTTCTTC+GGG + chr2_3:15162865-15162884 None:intergenic 40.0%
CTCTTCTGCATGCTGAATTT+AGG - chr2_3:15163022-15163041 Msa0280460:CDS 40.0%
CATGCTGAATTTAGGTATGC+AGG - chr2_3:15163030-15163049 Msa0280460:CDS 40.0%
TAAGACTGGATTTGAACCCA+AGG + chr2_3:15163141-15163160 None:intergenic 40.0%
CCTTCCACATTTACTAAGAC+TGG + chr2_3:15163155-15163174 None:intergenic 40.0%
CCAGTCTTAGTAAATGTGGA+AGG - chr2_3:15163152-15163171 Msa0280460:CDS 40.0%
GGGACTTATTTCCAAAGTGT+TGG + chr2_3:15163240-15163259 None:intergenic 40.0%
CAACTGGATTAAACCGAAGT+GGG + chr2_3:15163279-15163298 None:intergenic 40.0%
CTAGACTCTCTAATTCCTAG+AGG - chr2_3:15163492-15163511 Msa0280460:CDS 40.0%
ACTCTCTAATTCCTAGAGGT+TGG - chr2_3:15163496-15163515 Msa0280460:CDS 40.0%
CAGAAAAGTAACCAACCTCT+AGG + chr2_3:15163510-15163529 None:intergenic 40.0%
GCACGAGCTGAGTATATAAA+TGG + chr2_3:15163966-15163985 None:intergenic 40.0%
CTCACCTAACAAGACAACTT+AGG - chr2_3:15163985-15164004 Msa0280460:CDS 40.0%
! GTACCCTAAGTTGTCTTGTT+AGG + chr2_3:15163992-15164011 None:intergenic 40.0%
CTTGTTCAGTACAACATGAG+AGG - chr2_3:15164101-15164120 Msa0280460:CDS 40.0%
GTCTCTGCCATAACATTATC+AGG + chr2_3:15164164-15164183 None:intergenic 40.0%
TGCGTACATCATAGCTGTAA+TGG - chr2_3:15164243-15164262 Msa0280460:CDS 40.0%
TTCAGTACAGAGGATAATGC+TGG + chr2_3:15164305-15164324 None:intergenic 40.0%
GATGGCGAAATAAATCAGGT+AGG + chr2_3:15164390-15164409 None:intergenic 40.0%
! CAGTGATGGCGAAATAAATC+AGG + chr2_3:15164394-15164413 None:intergenic 40.0%
GCTCTAACTACAGATAAGGA+AGG + chr2_3:15164423-15164442 None:intergenic 40.0%
!! CCTAGCTCTAACTACAGATA+AGG + chr2_3:15164427-15164446 None:intergenic 40.0%
CCTTATCTGTAGTTAGAGCT+AGG - chr2_3:15164424-15164443 Msa0280460:CDS 40.0%
AAGGGTGAAAGTGAAGGGAA+GGG + chr2_3:15157962-15157981 None:intergenic 45.0%
ATGGCTTCAACTAGTAGAGG+AGG - chr2_3:15158042-15158061 Msa0280460:three_prime_UTR 45.0%
! ATGGCGTTGAGAAATTGAGG+AGG + chr2_3:15158085-15158104 None:intergenic 45.0%
AGAGTAATCGAAAGAGTCGC+CGG + chr2_3:15158232-15158251 None:intergenic 45.0%
GTACGGATGCTGTAGTAAGA+CGG + chr2_3:15158263-15158282 None:intergenic 45.0%
TTAGCCAAAATCCAACGTGG+CGG - chr2_3:15158306-15158325 Msa0280460:three_prime_UTR 45.0%
! AAAACCGCCACGTTGGATTT+TGG + chr2_3:15158313-15158332 None:intergenic 45.0%
GTTGAATAAAACCGCCACGT+TGG + chr2_3:15158320-15158339 None:intergenic 45.0%
TAAGCGAGAACGCGAAAAGA+AGG + chr2_3:15158372-15158391 None:intergenic 45.0%
!! TCAAGTGAAGGTACCGATTG+AGG + chr2_3:15158429-15158448 None:intergenic 45.0%
TCAATCGGTACCTTCACTTG+AGG - chr2_3:15158428-15158447 Msa0280460:three_prime_UTR 45.0%
TCATCATCGTCCTCAAGTGA+AGG + chr2_3:15158441-15158460 None:intergenic 45.0%
ATCCTGCTCTTTCCATTGCT+GGG - chr2_3:15158676-15158695 Msa0280460:CDS 45.0%
TCTCAGCTTCAATCACTTCC+TGG - chr2_3:15158735-15158754 Msa0280460:CDS 45.0%
! ACTTCCTGGTGGTGATGTTA+AGG - chr2_3:15158749-15158768 Msa0280460:CDS 45.0%
GTTTCATGAGGATGAGCATG+GGG - chr2_3:15158839-15158858 Msa0280460:intron 45.0%
TACTGAGCATGACAACCATG+AGG + chr2_3:15159071-15159090 None:intergenic 45.0%
GGAATGATGAAGACGGTGTT+GGG - chr2_3:15159144-15159163 Msa0280460:intron 45.0%
! CGTTGGAGAAGCGAGTTTTA+AGG - chr2_3:15159327-15159346 Msa0280460:intron 45.0%
TTGCTTAGGGATTCTCCTAC+TGG - chr2_3:15159374-15159393 Msa0280460:CDS 45.0%
TGCTTAGGGATTCTCCTACT+GGG - chr2_3:15159375-15159394 Msa0280460:CDS 45.0%
CTCTGAGTAACAATCCCAGT+AGG + chr2_3:15159392-15159411 None:intergenic 45.0%
!!! TGGGGCTGCTTTGTTTTATC+AGG - chr2_3:15159442-15159461 Msa0280460:intron 45.0%
!!! GGGGCTGCTTTGTTTTATCA+GGG - chr2_3:15159443-15159462 Msa0280460:intron 45.0%
! TCCCTTATTTGAGACTCGGT+CGG + chr2_3:15159494-15159513 None:intergenic 45.0%
ACTGATAGTTTGGCTGATGC+TGG - chr2_3:15159563-15159582 Msa0280460:CDS 45.0%
CATTGTCCCACTGCATACTA+CGG + chr2_3:15159796-15159815 None:intergenic 45.0%
CTTCCTTAAACGAGTCTCGT+AGG + chr2_3:15159853-15159872 None:intergenic 45.0%
!! GCAACTCTAGTTCTGCCATA+TGG + chr2_3:15159910-15159929 None:intergenic 45.0%
ATGGCAGAACTAGAGTTGCA+AGG - chr2_3:15159911-15159930 Msa0280460:intron 45.0%
TGGCAGAACTAGAGTTGCAA+GGG - chr2_3:15159912-15159931 Msa0280460:intron 45.0%
!! GGTTGATGAACTGAGTTCTG+TGG - chr2_3:15159934-15159953 Msa0280460:intron 45.0%
GAGTTCTGTGGCTAGAGAAA+TGG - chr2_3:15159946-15159965 Msa0280460:intron 45.0%
CTGTGGCTAGAGAAATGGTT+AGG - chr2_3:15159951-15159970 Msa0280460:intron 45.0%
ATGTCAATGGCCGCATCAAT+GGG - chr2_3:15160011-15160030 Msa0280460:intron 45.0%
TTGCATTCCACCCATTGATG+CGG + chr2_3:15160024-15160043 None:intergenic 45.0%
CATCAATGGGTGGAATGCAA+AGG - chr2_3:15160024-15160043 Msa0280460:intron 45.0%
TTCTGAATTGACGGGACTTC+TGG - chr2_3:15160048-15160067 Msa0280460:intron 45.0%
ACTTCTGGTAGAGGATGCTA+TGG - chr2_3:15160063-15160082 Msa0280460:intron 45.0%
CTTCTGGTAGAGGATGCTAT+GGG - chr2_3:15160064-15160083 Msa0280460:intron 45.0%
TTCTGGTAGAGGATGCTATG+GGG - chr2_3:15160065-15160084 Msa0280460:intron 45.0%
GTCATGATGGTTGGGCTTTA+TGG - chr2_3:15160571-15160590 Msa0280460:intron 45.0%
TTGAGTACGACTATGTGGGA+AGG - chr2_3:15160604-15160623 Msa0280460:intron 45.0%
TATAGGTCAGTCAAAGGTGG+AGG + chr2_3:15160753-15160772 None:intergenic 45.0%
!!! CTGCCTTATTTTGATTCCCC+GGG + chr2_3:15160975-15160994 None:intergenic 45.0%
ATGGGAGGGATCAATGCATT+TGG + chr2_3:15161147-15161166 None:intergenic 45.0%
!! GATCCCTCCCATTTTTGCAT+CGG - chr2_3:15161155-15161174 Msa0280460:CDS 45.0%
CATCCGATGCAAAAATGGGA+GGG + chr2_3:15161161-15161180 None:intergenic 45.0%
TCATCCGATGCAAAAATGGG+AGG + chr2_3:15161162-15161181 None:intergenic 45.0%
TGGAGCCGTACAGATGTAAT+TGG - chr2_3:15161231-15161250 Msa0280460:CDS 45.0%
TGTGAGTCCTGAACTTCAAC+AGG - chr2_3:15161482-15161501 Msa0280460:CDS 45.0%
GTTAGAGCCTGTTGAAGTTC+AGG + chr2_3:15161492-15161511 None:intergenic 45.0%
TCTAACAGTCCAGAGACAAC+AGG - chr2_3:15161506-15161525 Msa0280460:CDS 45.0%
GTAAAGCGTATGCCACTCAA+GGG + chr2_3:15161591-15161610 None:intergenic 45.0%
TGTAAAGCGTATGCCACTCA+AGG + chr2_3:15161592-15161611 None:intergenic 45.0%
!!! GCTGCTTTTGTTCATCAGTC+AGG + chr2_3:15161638-15161657 None:intergenic 45.0%
!! GATCTTGACAGCATCGATGA+CGG - chr2_3:15161714-15161733 Msa0280460:intron 45.0%
!! ATCTTGACAGCATCGATGAC+GGG - chr2_3:15161715-15161734 Msa0280460:intron 45.0%
CATTCATGTGAAAGCCTCCT+AGG - chr2_3:15161826-15161845 Msa0280460:intron 45.0%
CTTTCACATGGGATTAGGGT+AGG - chr2_3:15161923-15161942 Msa0280460:intron 45.0%
CTCAAACCAAATAGGTCCTG+TGG + chr2_3:15162079-15162098 None:intergenic 45.0%
! TCCTTCTGGCTAGGATATGT+AGG - chr2_3:15162532-15162551 Msa0280460:CDS 45.0%
ACCTACATATCCTAGCCAGA+AGG + chr2_3:15162536-15162555 None:intergenic 45.0%
TGAATCTCTACCCAACCATC+TGG + chr2_3:15162964-15162983 None:intergenic 45.0%
TCCAACACTCCCTGTCTTAT+TGG - chr2_3:15163197-15163216 Msa0280460:CDS 45.0%
! CCAACACTCCCTGTCTTATT+GGG - chr2_3:15163198-15163217 Msa0280460:CDS 45.0%
TCAATGTGGGTCCAACACTT+TGG - chr2_3:15163226-15163245 Msa0280460:CDS 45.0%
TGGGTCTCACCACTTTATGT+GGG + chr2_3:15163260-15163279 None:intergenic 45.0%
TAAAGTGGTGAGACCCACTT+CGG - chr2_3:15163263-15163282 Msa0280460:CDS 45.0%
CCAACTGGATTAAACCGAAG+TGG + chr2_3:15163280-15163299 None:intergenic 45.0%
CCACTTCGGTTTAATCCAGT+TGG - chr2_3:15163277-15163296 Msa0280460:CDS 45.0%
GAGTCACCCACTTACTGTTA+TGG + chr2_3:15163730-15163749 None:intergenic 45.0%
AGTAAGTGGGTGACTCAAGA+AGG - chr2_3:15163734-15163753 Msa0280460:CDS 45.0%
TGGGTGACTCAAGAAGGTTT+AGG - chr2_3:15163740-15163759 Msa0280460:CDS 45.0%
GGGTGACTCAAGAAGGTTTA+GGG - chr2_3:15163741-15163760 Msa0280460:CDS 45.0%
TTCTTGAACTACCTGTGACG+CGG - chr2_3:15163849-15163868 Msa0280460:CDS 45.0%
! GCCGAATCAGCTTGTTCAAA+TGG + chr2_3:15164017-15164036 None:intergenic 45.0%
ACAGAGGATAATGCTGGAGA+CGG + chr2_3:15164299-15164318 None:intergenic 45.0%
! GGCAGTTACTTTCAGTACAG+AGG + chr2_3:15164315-15164334 None:intergenic 45.0%
AAGGAAGGGATGTACAGTGA+TGG + chr2_3:15164408-15164427 None:intergenic 45.0%
GAAGGGTGAAAGTGAAGGGA+AGG + chr2_3:15157963-15157982 None:intergenic 50.0%
!! CACGCCGTTTTCGAACAATC+CGG - chr2_3:15158210-15158229 Msa0280460:three_prime_UTR 50.0%
GTCGCCGGATTGTTCGAAAA+CGG + chr2_3:15158217-15158236 None:intergenic 50.0%
GGATGCTGTAGTAAGACGGA+TGG + chr2_3:15158259-15158278 None:intergenic 50.0%
GAGAACGCACGTGATATGCT+TGG - chr2_3:15158396-15158415 Msa0280460:three_prime_UTR 50.0%
GATGATGAGTCATCGTCCTC+AGG - chr2_3:15158453-15158472 Msa0280460:three_prime_UTR 50.0%
ACTAATCTCTCGAGCCGAGA+AGG + chr2_3:15158544-15158563 None:intergenic 50.0%
! TTTGGAGCCTGCAAGATCTG+AGG - chr2_3:15158653-15158672 Msa0280460:CDS 50.0%
GATCCTGCTCTTTCCATTGC+TGG - chr2_3:15158675-15158694 Msa0280460:CDS 50.0%
TCCTGCTCTTTCCATTGCTG+GGG - chr2_3:15158677-15158696 Msa0280460:CDS 50.0%
GGCGGTACAGTCTCAGAAAT+TGG - chr2_3:15158698-15158717 Msa0280460:CDS 50.0%
CAGCTTCAATCACTTCCTGG+TGG - chr2_3:15158738-15158757 Msa0280460:CDS 50.0%
TCCTGCTACTGATATACCGC+AGG - chr2_3:15158917-15158936 Msa0280460:intron 50.0%
AACAAAAACCTCGACGCCTG+CGG + chr2_3:15158936-15158955 None:intergenic 50.0%
!! ACTTGTGCAGCCGGTTTGTT+TGG - chr2_3:15159025-15159044 Msa0280460:intron 50.0%
GTACTCCCCACCAAACAAAC+CGG + chr2_3:15159038-15159057 None:intergenic 50.0%
TATGGGGTCGATTGCTTCGT+TGG - chr2_3:15159100-15159119 Msa0280460:intron 50.0%
! GTCGATTGCTTCGTTGGCTA+TGG - chr2_3:15159106-15159125 Msa0280460:intron 50.0%
GGGAATGATGAAGACGGTGT+TGG - chr2_3:15159143-15159162 Msa0280460:intron 50.0%
! GATGAAGACGGTGTTGGGAT+TGG - chr2_3:15159149-15159168 Msa0280460:intron 50.0%
TCAGGGAAACTACTACCCGT+TGG - chr2_3:15159460-15159479 Msa0280460:intron 50.0%
CAGGGAAACTACTACCCGTT+GGG - chr2_3:15159461-15159480 Msa0280460:intron 50.0%
! CCTTATTTGAGACTCGGTCG+GGG + chr2_3:15159492-15159511 None:intergenic 50.0%
! CCCTTATTTGAGACTCGGTC+GGG + chr2_3:15159493-15159512 None:intergenic 50.0%
CCCGACCGAGTCTCAAATAA+GGG - chr2_3:15159490-15159509 Msa0280460:CDS 50.0%
!! GAGTGGTTGTTGGCCTTTCA+TGG - chr2_3:15159521-15159540 Msa0280460:CDS 50.0%
GGCCTTTCATGGTGATTCGA+CGG - chr2_3:15159532-15159551 Msa0280460:CDS 50.0%
GCCTTTCATGGTGATTCGAC+GGG - chr2_3:15159533-15159552 Msa0280460:CDS 50.0%
ACCCGTCGAATCACCATGAA+AGG + chr2_3:15159537-15159556 None:intergenic 50.0%
! TTGGCTGATGCTGGTTATCC+CGG - chr2_3:15159572-15159591 Msa0280460:CDS 50.0%
! AAAGCATCACCCGGAGGATA+AGG - chr2_3:15159709-15159728 Msa0280460:CDS 50.0%
ACCCGGAGGATAAGGATGAT+GGG - chr2_3:15159717-15159736 Msa0280460:CDS 50.0%
TGCCCATCATCCTTATCCTC+CGG + chr2_3:15159722-15159741 None:intergenic 50.0%
GCATCCTCGTTCTTCCTTCA+AGG - chr2_3:15159748-15159767 Msa0280460:CDS 50.0%
AAGGCCTTGAAGGAAGAACG+AGG + chr2_3:15159755-15159774 None:intergenic 50.0%
TGAAGAGCCGTAGTATGCAG+TGG - chr2_3:15159786-15159805 Msa0280460:intron 50.0%
GAAGAGCCGTAGTATGCAGT+GGG - chr2_3:15159787-15159806 Msa0280460:intron 50.0%
GCAGTGGGACAATGCAGAAA+TGG - chr2_3:15159802-15159821 Msa0280460:intron 50.0%
GTCTCGTAGGATAAGCTGCA+AGG + chr2_3:15159840-15159859 None:intergenic 50.0%
GGCTGTTGTGCATACCCATA+TGG - chr2_3:15159892-15159911 Msa0280460:intron 50.0%
GGCAGAACTAGAGTTGCAAG+GGG - chr2_3:15159913-15159932 Msa0280460:intron 50.0%
AACGGCAAATATGGGAGCAG+TGG + chr2_3:15159990-15160009 None:intergenic 50.0%
GATGCGGCCATTGACATCAA+CGG + chr2_3:15160008-15160027 None:intergenic 50.0%
GATGTCAATGGCCGCATCAA+TGG - chr2_3:15160010-15160029 Msa0280460:intron 50.0%
ATTGACGGGACTTCTGGTAG+AGG - chr2_3:15160054-15160073 Msa0280460:intron 50.0%
AGGAAGGACTCGACAAGACA+TGG + chr2_3:15160263-15160282 None:intergenic 50.0%
AGCCCAACCATCATGACATC+TGG + chr2_3:15160568-15160587 None:intergenic 50.0%
! GTTGGGCTTTATGGTCTGCA+CGG - chr2_3:15160580-15160599 Msa0280460:intron 50.0%
! TTGGGCTTTATGGTCTGCAC+GGG - chr2_3:15160581-15160600 Msa0280460:intron 50.0%
! ACGGGTTGAGTACGACTATG+TGG - chr2_3:15160599-15160618 Msa0280460:intron 50.0%
! CGGGTTGAGTACGACTATGT+GGG - chr2_3:15160600-15160619 Msa0280460:intron 50.0%
AGTACGACTATGTGGGAAGG+TGG - chr2_3:15160607-15160626 Msa0280460:intron 50.0%
GAAAATGAGGACGTTTGGCC+CGG - chr2_3:15160954-15160973 Msa0280460:CDS 50.0%
AAAATGAGGACGTTTGGCCC+GGG - chr2_3:15160955-15160974 Msa0280460:CDS 50.0%
TGGCCCGGGGAATCAAAATA+AGG - chr2_3:15160969-15160988 Msa0280460:CDS 50.0%
! TGGAGTGTGCTTTGTTGGTC+AGG - chr2_3:15161047-15161066 Msa0280460:CDS 50.0%
CTATGGAAAAGCTCAGCGGT+TGG - chr2_3:15161211-15161230 Msa0280460:CDS 50.0%
! TGGAAAACTGTTGGTGGGAG+AGG - chr2_3:15161251-15161270 Msa0280460:CDS 50.0%
!! CTGTTGGTGGGAGAGGTTTT+TGG - chr2_3:15161258-15161277 Msa0280460:CDS 50.0%
GTCTTGCACAATGCACTTGG+TGG - chr2_3:15161330-15161349 Msa0280460:CDS 50.0%
! CACAAGCAGCACTAGTCTCA+AGG + chr2_3:15161662-15161681 None:intergenic 50.0%
ATGTGAAAGCCTCCTAGGCT+TGG - chr2_3:15161831-15161850 Msa0280460:intron 50.0%
GGTCTCTGGCGCTTGAAAAA+CGG - chr2_3:15162749-15162768 Msa0280460:CDS 50.0%
GTCTCTGGCGCTTGAAAAAC+GGG - chr2_3:15162750-15162769 Msa0280460:CDS 50.0%
ATGCACCATCTCCAGATGGT+TGG - chr2_3:15162950-15162969 Msa0280460:CDS 50.0%
TGCACCATCTCCAGATGGTT+GGG - chr2_3:15162951-15162970 Msa0280460:CDS 50.0%
TCTACCCAACCATCTGGAGA+TGG + chr2_3:15162958-15162977 None:intergenic 50.0%
AAATGTGGAAGGTGAGCGCT+AGG - chr2_3:15163163-15163182 Msa0280460:CDS 50.0%
! CCCAATAAGACAGGGAGTGT+TGG + chr2_3:15163201-15163220 None:intergenic 50.0%
GTGGGTCTCACCACTTTATG+TGG + chr2_3:15163261-15163280 None:intergenic 50.0%
TTCGACACTCACTCTCCAAC+TGG + chr2_3:15163295-15163314 None:intergenic 50.0%
TTGTGAAGGATGGTGTGTCC+TGG - chr2_3:15163668-15163687 Msa0280460:CDS 50.0%
ATGGCGAAGTCCAGTATGTC+AGG - chr2_3:15163798-15163817 Msa0280460:CDS 50.0%
TGGCGAAGTCCAGTATGTCA+GGG - chr2_3:15163799-15163818 Msa0280460:CDS 50.0%
AGTATGTCAGGGAGGCAGAA+CGG - chr2_3:15163810-15163829 Msa0280460:CDS 50.0%
TTTAAGCTTCTCCGCGTCAC+AGG + chr2_3:15163863-15163882 None:intergenic 50.0%
CTGATATGCGTGCACCTTCA+TGG - chr2_3:15164186-15164205 Msa0280460:CDS 50.0%
!! CTGTAATGGACTCCACTCCA+TGG - chr2_3:15164257-15164276 Msa0280460:CDS 50.0%
! AATGGACTCCACTCCATGGT+TGG - chr2_3:15164261-15164280 Msa0280460:CDS 50.0%
AGTTCAGTCCAACCATGGAG+TGG + chr2_3:15164272-15164291 None:intergenic 50.0%
GATGCAGTTCAGTCCAACCA+TGG + chr2_3:15164277-15164296 None:intergenic 50.0%
ATCAGGTAGGGAACACACCT+TGG + chr2_3:15164377-15164396 None:intergenic 50.0%
CTCACAGAGTAGCAGTGAGT+GGG + chr2_3:15164512-15164531 None:intergenic 50.0%
ACTCACAGAGTAGCAGTGAG+TGG + chr2_3:15164513-15164532 None:intergenic 50.0%
CGGATTGTTCGAAAACGGCG+TGG + chr2_3:15158212-15158231 None:intergenic 55.0%
GCAGGATCCTCAGATCTTGC+AGG + chr2_3:15158663-15158682 None:intergenic 55.0%
TGCTCTTTCCATTGCTGGGG+CGG - chr2_3:15158680-15158699 Msa0280460:CDS 55.0%
GCCTGCGGTATATCAGTAGC+AGG + chr2_3:15158921-15158940 None:intergenic 55.0%
!! TGTGCAGCCGGTTTGTTTGG+TGG - chr2_3:15159028-15159047 Msa0280460:intron 55.0%
!! GTGCAGCCGGTTTGTTTGGT+GGG - chr2_3:15159029-15159048 Msa0280460:intron 55.0%
!! TGCAGCCGGTTTGTTTGGTG+GGG - chr2_3:15159030-15159049 Msa0280460:intron 55.0%
AGTACGCTTCGTGCTCCTCA+TGG - chr2_3:15159053-15159072 Msa0280460:intron 55.0%
! GAAGACGGTGTTGGGATTGG+TGG - chr2_3:15159152-15159171 Msa0280460:intron 55.0%
! GGTGTTGGGATTGGTGGTAC+CGG - chr2_3:15159158-15159177 Msa0280460:intron 55.0%
CCCCGACCGAGTCTCAAATA+AGG - chr2_3:15159489-15159508 Msa0280460:CDS 55.0%
! TGGCTGATGCTGGTTATCCC+GGG - chr2_3:15159573-15159592 Msa0280460:CDS 55.0%
TCTCTTGGGGATGCGGTTTG+TGG - chr2_3:15159602-15159621 Msa0280460:CDS 55.0%
CTCTTGGGGATGCGGTTTGT+GGG - chr2_3:15159603-15159622 Msa0280460:CDS 55.0%
CACCCGGAGGATAAGGATGA+TGG - chr2_3:15159716-15159735 Msa0280460:CDS 55.0%
GCCCATCATCCTTATCCTCC+GGG + chr2_3:15159721-15159740 None:intergenic 55.0%
TCAATGGCCGCATCAATGGG+TGG - chr2_3:15160014-15160033 Msa0280460:intron 55.0%
AAATGAGGACGTTTGGCCCG+GGG - chr2_3:15160956-15160975 Msa0280460:CDS 55.0%
GGTGAATGCTTGCTCCAGCA+AGG - chr2_3:15161005-15161024 Msa0280460:CDS 55.0%
GTTCGTCATGCTCCAAGCCT+AGG + chr2_3:15161846-15161865 None:intergenic 55.0%
CGCTATGCACCATCTCCAGA+TGG - chr2_3:15162946-15162965 Msa0280460:CDS 55.0%
!! ATTCCACACTGAGGGGTGCT+AGG + chr2_3:15163329-15163348 None:intergenic 55.0%
AGGATGGTGTGTCCTGGTGA+AGG - chr2_3:15163674-15163693 Msa0280460:CDS 55.0%
! GTTTAGGGCTGAGCATGAGC+AGG - chr2_3:15163756-15163775 Msa0280460:CDS 55.0%
CGAAGTCCAGTATGTCAGGG+AGG - chr2_3:15163802-15163821 Msa0280460:CDS 55.0%
GTTCTGCCTCCCTGACATAC+TGG + chr2_3:15163811-15163830 None:intergenic 55.0%
GTGCACCTTCATGGCCAAGT+GGG - chr2_3:15164195-15164214 Msa0280460:CDS 55.0%
TTTGTCGCTGGACACCCACT+TGG + chr2_3:15164212-15164231 None:intergenic 55.0%
GCCCCAGCAATGGAAAGAGC+AGG + chr2_3:15158681-15158700 None:intergenic 60.0%
AGACTGTACCGCCCCAGCAA+TGG + chr2_3:15158691-15158710 None:intergenic 60.0%
! CTGATATACCGCAGGCGTCG+AGG - chr2_3:15158925-15158944 Msa0280460:intron 60.0%
! GGATGAGGCACTTGTGCAGC+CGG - chr2_3:15159016-15159035 Msa0280460:intron 60.0%
TCAGTTAGCCGCGCAGTCGT+TGG - chr2_3:15159310-15159329 Msa0280460:intron 60.0%
TCGCTTCTCCAACGACTGCG+CGG + chr2_3:15159321-15159340 None:intergenic 60.0%
TCGGTCGGGGTAACACCCAA+CGG + chr2_3:15159479-15159498 None:intergenic 60.0%
! GGCTGATGCTGGTTATCCCG+GGG - chr2_3:15159574-15159593 Msa0280460:CDS 60.0%
TATCCCGGGGCTGCTTCTCT+TGG - chr2_3:15159587-15159606 Msa0280460:CDS 60.0%
ATCCCGGGGCTGCTTCTCTT+GGG - chr2_3:15159588-15159607 Msa0280460:CDS 60.0%
ATCCCCAAGAGAAGCAGCCC+CGG + chr2_3:15159594-15159613 None:intergenic 60.0%
GGCTGCTTCTCTTGGGGATG+CGG - chr2_3:15159595-15159614 Msa0280460:CDS 60.0%
TGGGGATGCGGTTTGTGGGA+TGG - chr2_3:15159607-15159626 Msa0280460:CDS 60.0%
! GGGTGGTGCAAAGCATCACC+CGG - chr2_3:15159700-15159719 Msa0280460:CDS 60.0%
! TGGTGCAAAGCATCACCCGG+AGG - chr2_3:15159703-15159722 Msa0280460:CDS 60.0%
CGTCATGCTCCAAGCCTAGG+AGG + chr2_3:15161843-15161862 None:intergenic 60.0%
GTTCCTAGCACCCCTCAGTG+TGG - chr2_3:15163323-15163342 Msa0280460:CDS 60.0%
TCAGGCGGAAGACCTTCACC+AGG + chr2_3:15163689-15163708 None:intergenic 60.0%
CGTGCACCTTCATGGCCAAG+TGG - chr2_3:15164194-15164213 Msa0280460:CDS 60.0%
GGACACCCACTTGGCCATGA+AGG + chr2_3:15164203-15164222 None:intergenic 60.0%
CGGTCGGGGTAACACCCAAC+GGG + chr2_3:15159478-15159497 None:intergenic 65.0%
TCCCGGGGCTGCTTCTCTTG+GGG - chr2_3:15159589-15159608 Msa0280460:CDS 65.0%
TCCCCAAGAGAAGCAGCCCC+GGG + chr2_3:15159593-15159612 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 15157951 15164580 15157951 ID=Msa0280460;Name=Msa0280460
chr2_3 mRNA 15157951 15164580 15157951 ID=Msa0280460-mRNA-1;Parent=Msa0280460;Name=Msa0280460-mRNA-1;_AED=0.07;_eAED=0.07;_QI=91|0.5|0.8|0.8|1|1|5|685|1163
chr2_3 exon 15157951 15158855 15157951 ID=Msa0280460-mRNA-1:exon:6324;Parent=Msa0280460-mRNA-1
chr2_3 exon 15159358 15159405 15159358 ID=Msa0280460-mRNA-1:exon:6323;Parent=Msa0280460-mRNA-1
chr2_3 exon 15159488 15159781 15159488 ID=Msa0280460-mRNA-1:exon:6322;Parent=Msa0280460-mRNA-1
chr2_3 exon 15160795 15161602 15160795 ID=Msa0280460-mRNA-1:exon:6321;Parent=Msa0280460-mRNA-1
chr2_3 exon 15162368 15164580 15162368 ID=Msa0280460-mRNA-1:exon:6320;Parent=Msa0280460-mRNA-1
chr2_3 five_prime_UTR 15164490 15164580 15164490 ID=Msa0280460-mRNA-1:five_prime_utr;Parent=Msa0280460-mRNA-1
chr2_3 CDS 15162368 15164489 15162368 ID=Msa0280460-mRNA-1:cds;Parent=Msa0280460-mRNA-1
chr2_3 CDS 15160795 15161602 15160795 ID=Msa0280460-mRNA-1:cds;Parent=Msa0280460-mRNA-1
chr2_3 CDS 15159488 15159781 15159488 ID=Msa0280460-mRNA-1:cds;Parent=Msa0280460-mRNA-1
chr2_3 CDS 15159358 15159405 15159358 ID=Msa0280460-mRNA-1:cds;Parent=Msa0280460-mRNA-1
chr2_3 CDS 15158636 15158855 15158636 ID=Msa0280460-mRNA-1:cds;Parent=Msa0280460-mRNA-1
chr2_3 three_prime_UTR 15157951 15158635 15157951 ID=Msa0280460-mRNA-1:three_prime_utr;Parent=Msa0280460-mRNA-1
Gene Sequence

>Msa0280460

ATGGCTTCAACTAGTAGAGGAGGAGCAGAAAAAACTACATCCTCCTCAATTTCTCAACGCCATCAACTTCAAATCACTACAACAAAAGAAACTGAACAACAAAATAACAACGTAAACAACAAATCAATGAAGAAAGCAATTGCACAATACACTGAAGACGCACGTCTCCACGCCGTTTTCGAACAATCCGGCGACTCTTTCGATTACTCTCAATCCATCCGTCTTACTACAGCATCCGTACCTGAACAACAGATCACTGCTTACTTAGCCAAAATCCAACGTGGCGGTTTTATTCAACCTTTTGGTTCAATGATCGCTGTTGATGAACCTTCTTTTCGCGTTCTCGCTTATAGCGAGAACGCACGTGATATGCTTGGTATTACTCCTCAATCGGTACCTTCACTTGAGGACGATGATGAGTCATCGTCCTCAGGTTTTAATATAGGTACCGATGTGAGGTCGCTTTTTACTCATTCTAGTGGTGTTTTACTAGAGAAAGCCTTCTCGGCTCGAGAGATTAGTCTTATGAATCCTATTTGGATTCATTCTAGATCTACTGGGAAGCCTTTTTATGGTATTCTTCATAGGATTGATGTTGGTGTTGTCATTGATTTGGAGCCTGCAAGATCTGAGGATCCTGCTCTTTCCATTGCTGGGGCGGTACAGTCTCAGAAATTGGCTGTACGCGCCATTTCTCAGCTTCAATCACTTCCTGGTGGTGATGTTAAGGTTTTATGTGATGCTGTTGTTGAGAGTGTTAGAGAATTGACTGGTTATGATAGGGTTATGGTTTATAAGTTTCATGAGGATGAGCATGGGGAAGTTGTTGCTGAGAGTAAGAGGATTGATTTGGAGCCGTATATGGGTTTGCATTATCCTGCTACTGATATACCGCAGGCGTCGAGGTTTTTGTTTAAGCAGAATAGGGTTAGGATGATTGTGGATTGTAATGCTTCTCCTGTTAGGGTTTTTCAGGATGAGGCACTTGTGCAGCCGGTTTGTTTGGTGGGGAGTACGCTTCGTGCTCCTCATGGTTGTCATGCTCAGTATATGGCGAATATGGGGTCGATTGCTTCGTTGGCTATGGCTGTTATTATTAATGGGAATGATGAAGACGGTGTTGGGATTGGTGGTACCGGAAGAAATTCTATGAGGCTTTGGGGTCTTGTTGTTTGTCATCATACTTCTGCTAGGTGTATTCCTTTTCCTCTTAGGTATGCTTGTGAGTTTCTAATGCAGGCTTTTGGGCTTCAGTTGAATATGGAGCTTCAGTTAGCCGCGCAGTCGTTGGAGAAGCGAGTTTTAAGGACGCAGACTCTGTTGTGTGATATGTTGCTTAGGGATTCTCCTACTGGGATTGTTACTCAGAGTCCTAGTATTATGGATTTGGTTAAGTGTGATGGGGCTGCTTTGTTTTATCAGGGAAACTACTACCCGTTGGGTGTTACCCCGACCGAGTCTCAAATAAGGGATATTATAGAGTGGTTGTTGGCCTTTCATGGTGATTCGACGGGTTTGAGTACTGATAGTTTGGCTGATGCTGGTTATCCCGGGGCTGCTTCTCTTGGGGATGCGGTTTGTGGGATGGCTGTTGCGTATATCACTGAAAAGGATTTTCTTTTCTGGTTCAGATCGCATACGGCAAAAGAGATTAAATGGGGTGGTGCAAAGCATCACCCGGAGGATAAGGATGATGGGCAGAGAATGCATCCTCGTTCTTCCTTCAAGGCCTTTTTAGAAGTGGTGAAGAGCCGTAGTATGCAGTGGGACAATGCAGAAATGGATGCAATTCACTCCTTGCAGCTTATCCTACGAGACTCGTTTAAGGAAGCTGAGAATAACGATTCAAAGGCTGTTGTGCATACCCATATGGCAGAACTAGAGTTGCAAGGGGTTGATGAACTGAGTTCTGTGGCTAGAGAAATGGTTAGGTTGATAGAAACTGCCACTGCTCCCATATTTGCCGTTGATGTCAATGGCCGCATCAATGGGTGGAATGCAAAGGTTTCTGAATTGACGGGACTTCTGGTAGAGGATGCTATGGGGAAGTCTTTGCTTCATGATCTTGTGTATAAGGAGTCTCAAGAAACTGTAGACAAGCTTCTTTCTCATGCTTTGAAAGGTGAAGAAGATAAGAATGTTGAGATGAAAATGAGGACGTTTGGCCCGGGGAATCAAAATAAGGCAGTTTTTATAGTGGTGAATGCTTGCTCCAGCAAGGATTATACAAATAATATAGTTGGAGTGTGCTTTGTTGGTCAGGATGTTACTGGTCAAAAAGTTGTAATGGACAAATTCATTAACATACAAGGTGACTACAAGGCTATTGTACATAGTCCAAATGCATTGATCCCTCCCATTTTTGCATCGGATGATAACACATGTTGCTTAGAGTGGAACAATGCTATGGAAAAGCTCAGCGGTTGGAGCCGTACAGATGTAATTGGAAAACTGTTGGTGGGAGAGGTTTTTGGTAGTTTCTGTCAGTTGAAGGGTTCAGATGCTATGACAAAGTTTATGATTGTCTTGCACAATGCACTTGGTGGACAAGACACAGACAAATTTCCATTTTCATTTGTTGACAGGCATGGAAAGTATGTGCAGACTTTCTTGACTGCAAATAAGAGGGTTAACATGGATGGTCAGATCATTGGCGCTTTTTGCTTTTTGCAAATTGTGAGTCCTGAACTTCAACAGGCTCTAACAGTCCAGAGACAACAGGATAGTAGTTGCTTTGCTAGGATGAAAGAGTTAGCTTATATTTGTCAAGAAGTAAAGAATCCCTTGAGTGGCATACGCTTTACAAACTCTCTTCTGGAGTCTACATGCCTGACTGATGAACAAAAGCAGCTCCTTGAGACTAGTGCTGCTTGTGAGAAGCAAATGTTAAAGATAATACGGGACATTGATCTTGACAGCATCGATGACGGGTCTCTGGCGCTTGAAAAACGGGAATTCTTGCTCGAGAATGTCATAAATGCAGTTGTTAGCCAAGTAATGTTATTGCTAAGAGAAAGAAATTTACAGTTGATTCGTGATATTCCCGAAGAAATCAAGACATTGGCTGTTTATGGTGATCAATTGAGGATTCAACAAGTCTTGGCAGATTTCTTAATGAATGTGGTGCGCTATGCACCATCTCCAGATGGTTGGGTAGAGATTCATGTATTTCCAAGAATAAAACAAATTTCAGATGGGCTCACTCTTCTGCATGCTGAATTTAGCCTTTATAAGAACCTTGGGTTCAAATCCAGTCTTAGTAAATGTGGAAGGATGGTGTGTCCTGGTGAAGGTCTTCCGCCTGAATTGATTCAAGACATGTTCCATAACAGTAAGTGGGTGACTCAAGAAGGTTTAGGGCTGAGCATGAGCAGGAAGATTATAAAGTTAATGAATGGCGAAGTCCAGTATGTCAGGGAGGCAGAACGGTGCTACTTCTTAGTTGTTCTTGAACTACCTGTGACGCGGAGAAGCTTAAAAAATGTTAATTAG
Protein sequence

>Msa0280460

MASTSRGGAEKTTSSSISQRHQLQITTTKETEQQNNNVNNKSMKKAIAQYTEDARLHAVFEQSGDSFDYSQSIRLTTASVPEQQITAYLAKIQRGGFIQPFGSMIAVDEPSFRVLAYSENARDMLGITPQSVPSLEDDDESSSSGFNIGTDVRSLFTHSSGVLLEKAFSAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYDRVMVYKFHEDEHGEVVAESKRIDLEPYMGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGVGIGGTGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALFYQGNYYPLGVTPTESQIRDIIEWLLAFHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSMQWDNAEMDAIHSLQLILRDSFKEAENNDSKAVVHTHMAELELQGVDELSSVAREMVRLIETATAPIFAVDVNGRINGWNAKVSELTGLLVEDAMGKSLLHDLVYKESQETVDKLLSHALKGEEDKNVEMKMRTFGPGNQNKAVFIVVNACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFINIQGDYKAIVHSPNALIPPIFASDDNTCCLEWNNAMEKLSGWSRTDVIGKLLVGEVFGSFCQLKGSDAMTKFMIVLHNALGGQDTDKFPFSFVDRHGKYVQTFLTANKRVNMDGQIIGAFCFLQIVSPELQQALTVQRQQDSSCFARMKELAYICQEVKNPLSGIRFTNSLLESTCLTDEQKQLLETSAACEKQMLKIIRDIDLDSIDDGSLALEKREFLLENVINAVVSQVMLLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLADFLMNVVRYAPSPDGWVEIHVFPRIKQISDGLTLLHAEFSLYKNLGFKSSLSKCGRMVCPGEGLPPELIQDMFHNSKWVTQEGLGLSMSRKIIKLMNGEVQYVREAERCYFLVVLELPVTRRSLKNVN*