AlfalfaGEDB | Msa0291140

M. sativa cultivar zhongmu-4 / Msa0291140

KEGG: K00430
GO: GO:0000902 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004601 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0006950 GO:0006952 GO:0006970 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009505 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009826 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010043 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016209 GO:0016491 GO:0016684 GO:0030312 GO:0031090 GO:0031347 GO:0031349 GO:0032502 GO:0032989 GO:0035821 GO:0040007 GO:0040008 GO:0042221 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044003 GO:0044237 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045088 GO:0045089 GO:0045926 GO:0048046 GO:0048518 GO:0048519 GO:0048583 GO:0048584 GO:0048589 GO:0048856 GO:0048869 GO:0050776 GO:0050778 GO:0050789 GO:0050832 GO:0050896 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052031 GO:0052033 GO:0052166 GO:0052167 GO:0052169 GO:0052173 GO:0052200 GO:0052255 GO:0052257 GO:0052305 GO:0052306 GO:0052308 GO:0052509 GO:0052510 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052564 GO:0052572 GO:0055114 GO:0060560 GO:0065007 GO:0070887 GO:0071840 GO:0071944 GO:0072593 GO:0075136 GO:0080134 GO:0097237 GO:0098542 GO:0098588 GO:0098754 GO:0098805 GO:0098869 GO:1990748
PFAM: PF00141.26

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0291140	XP_003594495.2	98.028	355	7	0	1	355	1	355	0.0	710

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0291140	sp\|Q9LEH3\|PER15_IPOBA	65.677	303	103	1	24	325	21	323	4.56e-138	398

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0291140	G7IJU3	98.028	355	7	0	1	355	1	355	0.0	710

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0046050	Msa0291140	0.804738	1.870636e-49	-8.615850e-47
Msa0136090	Msa0291140	-0.802955	4.387147e-49	-8.615850e-47
Msa0137010	Msa0291140	0.806915	6.522515e-50	-8.615850e-47
Msa0234180	Msa0291140	0.876059	1.886375e-68	-8.615850e-47
Msa0291140	Msa0316720	0.800780	1.227200e-48	-8.615850e-47
Msa0291140	Msa0318480	0.843769	1.143218e-58	-8.615850e-47
Msa0291140	Msa0437790	0.811368	7.250163e-51	-8.615850e-47
Msa0291140	Msa0532740	0.845613	3.641114e-59	-8.615850e-47
Msa0291140	Msa0583310	0.859380	4.304109e-63	-8.615850e-47
Msa0291140	Msa0614390	0.800153	1.647045e-48	-8.615850e-47
Msa0291140	Msa0711860	0.827181	1.802688e-54	-8.615850e-47
Msa0291140	Msa0754840	0.802173	6.360098e-49	-8.615850e-47
Msa0291140	Msa0783280	0.802334	5.894643e-49	-8.615850e-47
Msa0291140	Msa0848860	0.803419	3.518431e-49	-8.615850e-47
Msa0291140	Msa0981680	0.875812	2.292984e-68	-8.615850e-47
Msa0291140	Msa1057320	0.842305	2.805067e-58	-8.615850e-47
Msa0291140	Msa1057340	0.811029	8.589585e-51	-8.615850e-47
Msa0291140	Msa1082640	0.807520	4.856802e-50	-8.615850e-47
Msa0291140	Msa1140480	0.805808	1.116528e-49	-8.615850e-47
Msa0291140	Msa1202220	0.806744	7.089536e-50	-8.615850e-47
Msa0291140	Msa1358790	0.802061	6.707689e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0291140	MtrunA17_Chr2g0292251	98.028	355	7	0	1	355	1	355	0.0	710
Msa0291140	MtrunA17_Chr2g0292241	80.952	357	63	2	1	354	1	355	0.0	589
Msa0291140	MtrunA17_Chr2g0292211	82.759	348	59	1	1	347	12	359	0.0	588
Msa0291140	MtrunA17_Chr2g0292181	82.029	345	57	2	1	342	10	352	0.0	578
Msa0291140	MtrunA17_Chr2g0291751	71.508	358	96	3	1	355	1	355	0.0	517
Msa0291140	MtrunA17_Chr2g0292111	71.229	358	97	3	1	355	1	355	0.0	511
Msa0291140	MtrunA17_Chr2g0292151	70.670	358	98	3	1	355	1	354	0.0	509
Msa0291140	MtrunA17_Chr2g0292271	70.739	352	95	3	4	353	6	351	3.49e-179	500
Msa0291140	MtrunA17_Chr2g0292261	71.831	355	93	4	1	353	1	350	3.80e-179	500
Msa0291140	MtrunA17_Chr2g0292091	68.358	335	99	1	1	335	4	331	1.37e-166	468
Msa0291140	MtrunA17_Chr2g0292291	67.241	348	106	4	7	353	11	351	3.20e-165	465
Msa0291140	MtrunA17_Chr2g0292101	67.470	332	101	1	4	335	8	332	6.67e-163	459
Msa0291140	MtrunA17_Chr7g0258811	60.502	319	125	1	12	329	53	371	4.94e-134	387
Msa0291140	MtrunA17_Chr1g0175561	56.881	327	138	2	4	329	2	326	1.23e-130	376
Msa0291140	MtrunA17_Chr5g0404721	52.649	302	142	1	28	329	30	330	1.60e-111	328
Msa0291140	MtrunA17_Chr4g0070951	51.534	326	152	4	9	330	7	330	1.48e-108	320
Msa0291140	MtrunA17_Chr8g0372601	50.165	303	150	1	28	330	30	331	4.85e-108	319
Msa0291140	MtrunA17_Chr2g0299691	49.538	325	157	3	9	330	39	359	8.00e-105	312
Msa0291140	MtrunA17_Chr5g0402581	49.530	319	157	3	12	329	11	326	5.68e-104	308
Msa0291140	MtrunA17_Chr5g0402571	47.059	323	161	4	8	329	13	326	9.99e-101	300
Msa0291140	MtrunA17_Chr2g0320071	46.933	326	164	2	4	329	1	317	1.58e-100	299
Msa0291140	MtrunA17_Chr3g0114451	47.077	325	161	3	7	329	3	318	3.24e-99	296
Msa0291140	MtrunA17_Chr1g0155611	49.338	302	153	0	28	329	46	347	3.47e-99	297
Msa0291140	MtrunA17_Chr3g0129051	48.580	317	148	4	11	325	15	318	1.55e-97	292
Msa0291140	MtrunA17_Chr2g0320101	46.319	326	166	2	4	329	1	317	1.57e-97	292
Msa0291140	MtrunA17_Chr2g0320031	48.012	327	161	3	4	329	1	319	3.22e-97	291
Msa0291140	MtrunA17_Chr7g0244461	48.026	304	149	2	26	329	18	312	4.82e-97	290
Msa0291140	MtrunA17_Chr4g0043391	47.590	332	163	4	1	329	1	324	1.20e-96	290
Msa0291140	MtrunA17_Chr3g0106921	47.416	329	161	4	4	329	1	320	5.93e-96	288
Msa0291140	MtrunA17_Chr2g0320091	46.177	327	166	3	4	329	1	318	1.23e-95	287
Msa0291140	MtrunA17_Chr2g0292281	64.378	233	68	4	121	353	18	235	1.75e-95	284
Msa0291140	MtrunA17_Chr4g0013201	48.065	310	152	2	20	329	38	338	2.05e-95	287
Msa0291140	MtrunA17_Chr4g0038171	49.221	321	151	5	13	329	9	321	2.43e-95	286
Msa0291140	MtrunA17_Chr5g0432441	47.432	331	157	6	4	329	8	326	7.68e-95	285
Msa0291140	MtrunA17_Chr4g0013171	48.265	317	153	4	15	329	14	321	1.68e-94	284
Msa0291140	MtrunA17_Chr4g0038151	48.297	323	152	6	11	329	10	321	1.88e-94	284
Msa0291140	MtrunA17_Chr2g0320061	45.706	326	169	2	4	329	1	318	3.03e-94	283
Msa0291140	MtrunA17_Chr2g0320051	46.012	326	168	2	4	329	1	318	3.72e-94	283
Msa0291140	MtrunA17_Chr4g0038161	48.607	323	150	6	11	329	10	320	9.88e-94	282
Msa0291140	MtrunA17_Chr3g0129061	47.516	322	154	4	6	325	10	318	8.12e-93	280
Msa0291140	MtrunA17_Chr5g0438021	45.511	323	161	4	9	329	16	325	1.15e-92	280
Msa0291140	MtrunA17_Chr7g0244451	46.201	329	164	3	1	329	1	316	1.86e-92	279
Msa0291140	MtrunA17_Chr5g0432351	45.988	324	164	4	11	331	8	323	4.37e-92	278
Msa0291140	MtrunA17_Chr5g0432341	44.985	329	170	4	4	329	1	321	4.76e-92	278
Msa0291140	MtrunA17_Chr4g0013191	48.534	307	146	5	26	329	43	340	8.05e-91	275
Msa0291140	MtrunA17_Chr3g0129041	47.853	326	155	4	6	329	10	322	1.91e-90	274
Msa0291140	MtrunA17_Chr4g0013181	49.000	300	142	4	32	329	63	353	3.24e-90	274
Msa0291140	MtrunA17_Chr4g0068621	45.875	303	159	3	28	329	38	336	3.28e-90	274
Msa0291140	MtrunA17_Chr5g0432331	45.758	330	168	5	3	329	31	352	3.38e-90	274
Msa0291140	MtrunA17_Chr2g0322861	44.340	318	171	5	14	329	73	386	8.82e-89	272
Msa0291140	MtrunA17_Chr5g0400331	45.752	306	162	2	28	329	26	331	1.09e-88	270
Msa0291140	MtrunA17_Chr4g0024121	44.514	319	173	3	12	329	11	326	1.31e-88	269
Msa0291140	MtrunA17_Chr1g0213061	43.210	324	171	5	9	330	10	322	1.45e-88	269
Msa0291140	MtrunA17_Chr3g0106901	46.057	317	162	2	13	329	16	323	5.73e-88	268
Msa0291140	MtrunA17_Chr4g0063671	43.653	323	167	7	13	329	7	320	6.18e-87	265
Msa0291140	MtrunA17_Chr7g0268501	43.558	326	178	4	4	329	1	320	1.46e-86	264
Msa0291140	MtrunA17_Chr7g0268521	43.558	326	178	4	4	329	1	320	1.46e-86	264
Msa0291140	MtrunA17_Chr2g0279041	43.413	334	172	7	4	329	1	325	2.00e-86	264
Msa0291140	MtrunA17_Chr5g0421411	46.263	281	146	5	54	330	7	286	1.71e-85	260
Msa0291140	MtrunA17_Chr4g0013821	40.000	330	193	3	6	335	6	330	3.90e-84	258
Msa0291140	MtrunA17_Chr3g0107881	44.136	324	171	3	9	329	8	324	2.35e-83	256
Msa0291140	MtrunA17_Chr4g0013721	42.444	311	174	3	23	333	95	400	3.61e-82	256
Msa0291140	MtrunA17_Chr3g0128061	40.938	320	186	2	12	330	10	327	7.48e-81	249
Msa0291140	MtrunA17_Chr4g0076211	43.960	298	156	6	33	329	46	333	1.41e-80	249
Msa0291140	MtrunA17_Chr7g0224371	39.144	327	189	3	4	330	7	323	1.75e-80	248
Msa0291140	MtrunA17_Chr7g0254201	41.639	305	169	5	26	330	18	313	3.79e-79	244
Msa0291140	MtrunA17_Chr2g0296621	43.322	307	162	6	25	330	47	342	5.90e-79	245
Msa0291140	MtrunA17_Chr5g0405991	41.562	320	171	8	11	329	12	316	6.23e-79	244
Msa0291140	MtrunA17_Chr4g0046131	42.623	305	168	5	27	326	41	343	3.44e-78	243
Msa0291140	MtrunA17_Chr1g0204011	42.345	307	169	5	24	329	23	322	4.32e-78	242
Msa0291140	MtrunA17_Chr8g0371381	41.722	302	168	5	28	329	26	319	5.63e-78	242
Msa0291140	MtrunA17_Chr1g0148021	44.300	307	163	5	27	329	26	328	5.18e-77	239
Msa0291140	MtrunA17_Chr6g0467121	42.813	327	165	8	28	351	74	381	8.22e-77	241
Msa0291140	MtrunA17_Chr1g0194151	39.818	329	188	4	7	329	9	333	1.20e-76	239
Msa0291140	MtrunA17_Chr1g0164891	42.384	302	168	5	32	329	93	392	1.49e-76	241
Msa0291140	MtrunA17_Chr1g0194271	40.719	334	185	5	7	329	9	340	1.64e-76	239
Msa0291140	MtrunA17_Chr6g0467161	40.294	340	179	8	4	331	11	338	6.26e-76	237
Msa0291140	MtrunA17_Chr7g0225221	42.154	325	172	6	11	329	6	320	1.18e-75	236
Msa0291140	MtrunA17_Chr4g0053871	43.034	323	168	7	8	325	9	320	1.71e-74	233
Msa0291140	MtrunA17_Chr5g0401431	41.748	309	173	4	24	328	23	328	2.39e-74	233
Msa0291140	MtrunA17_Chr4g0075241	39.688	320	183	5	15	329	13	327	1.18e-73	231
Msa0291140	MtrunA17_Chr4g0072091	43.894	303	160	5	27	325	23	319	1.48e-73	231
Msa0291140	MtrunA17_Chr1g0157051	39.264	326	190	5	4	329	1	318	1.10e-72	228
Msa0291140	MtrunA17_Chr1g0197411	38.623	334	198	5	1	330	1	331	1.25e-72	229
Msa0291140	MtrunA17_Chr2g0278671	41.158	311	171	6	24	329	20	323	1.51e-70	223
Msa0291140	MtrunA17_Chr1g0188431	39.404	302	170	6	28	329	39	327	3.20e-70	222
Msa0291140	MtrunA17_Chr6g0460711	39.564	321	181	7	11	329	5	314	4.62e-70	221
Msa0291140	MtrunA17_Chr2g0279061	46.565	262	129	5	72	329	12	266	4.93e-70	219
Msa0291140	MtrunA17_Chr5g0413051	39.936	313	173	9	26	329	71	377	9.98e-70	223
Msa0291140	MtrunA17_Chr7g0254231	40.584	308	165	7	26	330	20	312	5.80e-69	218
Msa0291140	MtrunA17_Chr8g0364291	39.062	320	186	5	14	329	10	324	6.93e-68	216
Msa0291140	MtrunA17_Chr6g0467251	40.667	300	165	6	28	325	36	324	2.37e-67	216
Msa0291140	MtrunA17_Chr2g0329641	38.462	312	174	7	27	330	35	336	1.94e-66	213
Msa0291140	MtrunA17_Chr6g0477071	38.111	307	173	6	25	329	51	342	7.02e-66	211
Msa0291140	MtrunA17_Chr5g0432401	38.323	334	148	6	4	328	1	285	3.36e-65	208
Msa0291140	MtrunA17_Chr3g0136751	38.871	319	183	5	12	325	7	318	2.52e-64	207
Msa0291140	MtrunA17_Chr6g0451571	39.228	311	178	7	24	329	30	334	2.97e-64	207
Msa0291140	MtrunA17_Chr1g0181511	37.540	309	182	4	26	331	25	325	1.82e-62	202
Msa0291140	MtrunA17_Chr2g0316481	36.145	332	177	7	26	325	74	402	5.20e-61	201
Msa0291140	MtrunA17_Chr2g0316791	35.542	332	179	7	26	325	74	402	9.45e-61	200
Msa0291140	MtrunA17_Chr2g0316831	35.843	332	178	7	26	325	110	438	1.22e-59	198
Msa0291140	MtrunA17_Chr2g0311251	35.522	335	180	7	26	328	9	339	1.06e-58	193
Msa0291140	MtrunA17_Chr2g0316191	35.435	333	179	7	26	325	74	403	2.29e-58	194
Msa0291140	MtrunA17_Chr1g0181431	36.570	309	185	4	26	331	25	325	2.99e-58	191
Msa0291140	MtrunA17_Chr4g0074851	36.190	315	190	4	23	334	27	333	1.93e-57	189
Msa0291140	MtrunA17_Chr1g0181481	36.893	309	184	4	26	331	25	325	3.32e-57	189
Msa0291140	MtrunA17_Chr2g0311241	32.011	378	180	7	26	330	58	431	1.37e-54	185
Msa0291140	MtrunA17_Chr3g0114461	45.789	190	95	2	140	329	11	192	1.39e-49	164
Msa0291140	MtrunA17_Chr4g0004591	32.087	321	156	4	28	328	77	355	1.72e-46	161
Msa0291140	MtrunA17_Chr2g0316811	37.611	226	123	3	28	236	50	274	3.16e-42	150
Msa0291140	MtrunA17_Chr2g0316141	33.219	292	140	10	73	330	10	280	3.59e-37	135
Msa0291140	MtrunA17_Chr2g0316181	33.219	292	140	10	73	330	10	280	3.59e-37	135
Msa0291140	MtrunA17_Chr3g0114491	54.545	110	50	0	27	136	17	126	8.20e-36	127
Msa0291140	MtrunA17_Chr1g0181501	35.052	194	115	4	141	331	6	191	2.50e-28	109
Msa0291140	MtrunA17_Chr3g0104101	40.559	143	80	5	192	330	9	150	3.98e-25	99.4
Msa0291140	MtrunA17_Chr5g0432321	42.742	124	63	2	149	272	17	132	1.04e-23	95.1
Msa0291140	MtrunA17_Chr7g0254181	36.290	124	76	1	71	194	2	122	2.86e-19	83.6
Msa0291140	MtrunA17_Chr6g0468731	56.338	71	27	2	67	137	22	88	1.90e-18	79.3
Msa0291140	MtrunA17_Chr1g0181491	41.667	108	61	2	25	132	9	114	4.42e-18	80.1
Msa0291140	MtrunA17_Chr5g0432361	42.529	87	49	1	242	328	23	108	1.03e-15	72.4
Msa0291140	MtrunA17_Chr1g0196191	51.136	88	38	3	62	147	21	105	7.69e-15	71.2
Msa0291140	MtrunA17_Chr7g0268491	41.414	99	54	3	231	329	3	97	3.38e-14	67.8
Msa0291140	MtrunA17_Chr3g0124821	26.236	263	156	8	62	313	121	356	9.25e-14	71.6
Msa0291140	MtrunA17_Chr4g0013811	41.667	72	42	0	140	211	7	78	1.56e-12	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0291140	AT5G06730.1	54.624	346	153	1	9	354	14	355	1.39e-132	383
Msa0291140	AT5G06720.1	56.522	322	140	0	8	329	12	333	7.88e-131	377
Msa0291140	AT2G38380.1	55.988	334	136	3	23	355	26	349	3.92e-130	376
Msa0291140	AT2G38390.1	54.192	334	142	3	23	355	26	349	1.65e-127	370
Msa0291140	AT3G32980.1	55.491	346	147	4	7	347	9	352	7.39e-127	368
Msa0291140	AT3G49120.1	54.942	344	148	4	9	347	12	353	2.27e-126	367
Msa0291140	AT3G49110.1	55.233	344	147	4	9	347	13	354	4.05e-125	363
Msa0291140	AT4G08770.1	55.312	320	141	2	24	341	20	339	1.79e-123	359
Msa0291140	AT4G08780.1	54.062	320	145	2	24	341	20	339	1.61e-121	354
Msa0291140	AT5G19880.1	51.713	321	150	3	14	329	9	329	1.23e-111	328
Msa0291140	AT2G18140.1	51.987	302	144	1	28	329	35	335	3.91e-109	322
Msa0291140	AT5G66390.1	49.675	308	154	1	22	329	27	333	1.97e-107	318
Msa0291140	AT2G18150.1	50.329	304	150	1	26	329	34	336	2.04e-106	315
Msa0291140	AT4G36430.1	50.000	308	153	1	23	330	25	331	1.18e-105	313
Msa0291140	AT5G19890.1	53.268	306	135	4	26	329	28	327	7.98e-105	311
Msa0291140	AT3G50990.1	49.191	309	156	1	23	331	36	343	3.56e-103	307
Msa0291140	AT1G44970.1	49.342	304	154	0	26	329	43	346	7.08e-101	301
Msa0291140	AT1G14550.1	50.654	306	141	5	26	329	24	321	3.76e-99	296
Msa0291140	AT1G14540.1	50.789	317	147	5	14	329	7	315	5.41e-97	291
Msa0291140	AT5G05340.1	48.208	307	148	3	25	329	27	324	1.91e-96	290
Msa0291140	AT1G68850.1	46.154	312	162	5	24	330	26	336	2.65e-94	285
Msa0291140	AT1G49570.1	46.885	305	157	3	26	327	46	348	3.14e-93	282
Msa0291140	AT4G16270.1	46.980	298	155	2	32	329	54	348	3.07e-92	280
Msa0291140	AT2G35380.1	48.675	302	151	3	32	329	34	335	7.39e-91	276
Msa0291140	AT5G58390.1	46.273	322	161	5	11	329	4	316	1.91e-90	274
Msa0291140	AT5G58400.1	45.342	322	161	5	11	329	16	325	2.05e-87	266
Msa0291140	AT4G11290.1	41.745	321	183	3	11	329	8	326	7.69e-87	265
Msa0291140	AT2G41480.1	43.827	324	169	6	11	329	13	328	1.10e-85	262
Msa0291140	AT3G21770.1	42.405	316	176	4	17	330	18	329	5.19e-85	261
Msa0291140	AT5G15180.1	41.441	333	187	6	1	329	1	329	8.09e-85	260
Msa0291140	AT3G03670.1	43.421	304	169	2	26	329	21	321	9.01e-85	259
Msa0291140	AT1G71695.1	44.713	331	161	7	28	355	44	355	3.35e-84	259
Msa0291140	AT1G05260.1	41.265	332	187	6	1	330	1	326	4.60e-84	258
Msa0291140	AT5G64120.1	45.151	299	154	6	32	329	39	328	5.31e-82	253
Msa0291140	AT2G22420.1	41.346	312	178	3	28	339	23	329	1.10e-81	252
Msa0291140	AT4G30170.1	44.156	308	161	4	26	329	25	325	2.07e-81	251
Msa0291140	AT4G25980.1	43.689	309	163	5	26	329	24	326	8.15e-81	249
Msa0291140	AT2G18980.1	44.099	322	167	5	14	329	9	323	1.99e-80	249
Msa0291140	AT3G01190.1	41.925	322	179	6	8	329	8	321	2.65e-80	248
Msa0291140	AT5G17820.1	42.623	305	161	7	26	329	22	313	6.24e-79	244
Msa0291140	AT5G14130.1	42.593	324	175	6	12	329	12	330	1.32e-78	244
Msa0291140	AT5G14130.2	42.593	324	175	6	12	329	53	371	3.53e-78	244
Msa0291140	AT3G49960.1	42.025	326	182	4	8	329	7	329	5.33e-78	243
Msa0291140	AT5G67400.1	42.025	326	182	4	8	329	7	329	5.63e-78	243
Msa0291140	AT5G17820.2	42.623	305	161	7	26	329	75	366	8.05e-78	243
Msa0291140	AT4G37530.1	43.226	310	169	4	24	329	23	329	1.79e-77	241
Msa0291140	AT5G51890.1	40.248	323	184	6	8	329	8	322	2.00e-77	241
Msa0291140	AT1G05240.1	42.763	304	160	5	32	329	30	325	4.28e-77	240
Msa0291140	AT1G05250.1	42.763	304	160	5	32	329	30	325	4.28e-77	240
Msa0291140	AT5G39580.1	44.482	299	157	6	32	329	29	319	9.85e-76	236
Msa0291140	AT4G33420.1	40.000	325	181	7	5	329	15	325	6.92e-74	232
Msa0291140	AT4G33420.2	40.000	325	181	7	5	329	62	372	2.62e-73	232
Msa0291140	AT5G42180.1	39.394	330	184	8	1	328	1	316	7.23e-72	226
Msa0291140	AT2G34060.1	40.523	306	173	6	27	326	41	343	3.61e-71	226
Msa0291140	AT5G64110.1	43.709	302	157	7	32	329	38	330	7.09e-71	224
Msa0291140	AT4G37520.1	40.260	308	177	4	26	329	25	329	1.05e-70	224
Msa0291140	AT5G40150.1	39.873	316	173	5	20	329	24	328	1.10e-70	224
Msa0291140	AT2G39040.1	41.346	312	172	6	25	329	43	350	2.10e-69	221
Msa0291140	AT4G37520.2	39.935	308	175	5	26	329	25	326	3.11e-69	220
Msa0291140	AT3G28200.1	38.019	313	176	5	23	329	16	316	8.27e-69	219
Msa0291140	AT5G24070.1	40.260	308	165	7	34	333	43	339	3.57e-68	218
Msa0291140	AT4G31760.1	38.125	320	187	5	13	329	15	326	3.79e-68	217
Msa0291140	AT2G24800.1	39.935	308	174	5	26	329	29	329	3.79e-68	217
Msa0291140	AT1G77100.1	40.308	325	176	8	12	329	6	319	5.46e-68	216
Msa0291140	AT5G64100.1	40.864	301	165	7	32	329	41	331	9.40e-68	216
Msa0291140	AT1G24110.1	38.750	320	187	6	14	329	8	322	9.97e-68	216
Msa0291140	AT4G33870.1	35.030	334	171	6	32	326	72	398	1.42e-67	218
Msa0291140	AT4G26010.1	39.755	327	173	9	7	329	3	309	1.43e-67	215
Msa0291140	AT4G26010.2	39.755	327	173	9	7	329	31	337	1.54e-67	216
Msa0291140	AT4G37530.2	45.349	258	136	3	24	277	23	279	3.55e-67	213
Msa0291140	AT2G43480.1	40.728	302	160	7	36	329	45	335	1.47e-66	213
Msa0291140	AT2G35380.2	47.368	247	126	3	87	329	1	247	2.25e-66	210
Msa0291140	AT1G30870.1	38.608	316	177	7	22	332	45	348	2.49e-66	213
Msa0291140	AT4G17690.1	38.889	306	176	5	28	330	26	323	1.63e-65	210
Msa0291140	AT5G47000.1	36.503	326	196	6	9	330	13	331	1.20e-63	206
Msa0291140	AT1G34510.1	37.117	326	185	7	5	329	3	309	2.71e-60	196
Msa0291140	AT5G22410.1	36.570	309	176	9	26	326	26	322	4.68e-60	196
Msa0291140	AT4G21960.1	36.964	303	180	4	32	331	35	329	7.68e-59	193
Msa0291140	AT3G17070.1	36.283	339	197	8	2	329	9	339	4.31e-57	189
Msa0291140	AT2G37130.1	34.951	309	189	5	25	329	27	327	8.77e-54	180
Msa0291140	AT2G37130.2	35.430	302	183	5	32	329	3	296	1.74e-53	178
Msa0291140	AT4G25980.2	43.318	217	114	4	24	235	67	279	6.14e-51	171
Msa0291140	AT3G17070.2	36.194	268	154	8	70	329	18	276	1.39e-41	147
Msa0291140	AT5G39580.2	47.368	171	85	3	32	202	29	194	2.66e-40	142
Msa0291140	AT2G24800.2	41.279	172	97	1	26	197	29	196	3.89e-37	134
Msa0291140	AT4G08390.3	26.415	265	153	10	62	313	126	361	1.45e-14	74.7
Msa0291140	AT4G08390.2	26.415	265	153	10	62	313	127	362	1.47e-14	74.7
Msa0291140	AT4G08390.5	26.415	265	153	10	62	313	127	362	1.47e-14	74.7
Msa0291140	AT4G08390.1	26.415	265	153	10	62	313	127	362	1.47e-14	74.7
Msa0291140	AT1G77490.2	26.336	262	155	8	62	312	106	340	9.44e-14	72.4
Msa0291140	AT1G77490.1	26.236	263	156	8	62	313	106	341	1.04e-13	72.4
Msa0291140	AT3G09640.2	25.862	232	124	8	85	312	59	246	1.75e-13	70.1
Msa0291140	AT3G09640.1	25.862	232	124	8	85	312	59	246	1.75e-13	70.1
Msa0291140	AT3G42570.1	31.683	101	68	1	96	195	49	149	2.17e-11	62.0

Find 74 sgRNAs with CRISPR-Local

Find 127 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGCTTTCTTTGAGAGCTTTA+AGG	0.108597	2_3:-39268344	Msa0291140:CDS
CCTCTTAGAGAGTTGTTATT+TGG	0.135333	2_3:+39269323	None:intergenic
CTCCAATCTTCAAGTGAAAA+AGG	0.146920	2_3:-39268452	Msa0291140:CDS
TAAGGCTGCAATGATTAAAA+TGG	0.175071	2_3:-39268326	Msa0291140:CDS
GGCAATATTGGTGTGCTAAC+AGG	0.250866	2_3:-39268304	Msa0291140:CDS
CAAGAGTTGTTCTCAACTTC+TGG	0.284519	2_3:-39268412	Msa0291140:CDS
TCCGGCTCCATTCAATTCCT+TGG	0.334088	2_3:-39268828	Msa0291140:CDS
ATTTCAGGTGCTCATACATT+TGG	0.340486	2_3:-39268658	Msa0291140:intron
TAGTTCTTGTCAAATTTATC+AGG	0.341189	2_3:+39268478	None:intergenic
ATGAGAGGACGTGTTCTTCT+TGG	0.350836	2_3:-39268054	Msa0291140:three_prime_UTR
CCTAGTTGGACGGTTCCTTT+AGG	0.356265	2_3:-39268899	Msa0291140:CDS
AGGAGTCGTTGGATCGAAAT+TGG	0.358608	2_3:+39268498	None:intergenic
GTAGGCGACTCATAAAATTA+TGG	0.369547	2_3:+39267952	None:intergenic
AGTTATAACTTATTTATTAG+TGG	0.370052	2_3:+39268116	None:intergenic
TGCTCAAGCATCCTCTGTTC+TGG	0.373097	2_3:-39269216	Msa0291140:intron
ATGATTAAAATGGGCAATAT+TGG	0.376995	2_3:-39268316	Msa0291140:CDS
ATCCTCTAATGATTCTACTA+TGG	0.377320	2_3:+39268204	None:intergenic
CCAAATAACAACTCTCTAAG+AGG	0.382329	2_3:-39269323	Msa0291140:CDS
ATCCATAGTAGAATCATTAG+AGG	0.411122	2_3:-39268206	Msa0291140:CDS
TAACAACTCTCTAAGAGGTT+TGG	0.412916	2_3:-39269318	Msa0291140:CDS
AAGTTGTGCATCTGAGGAAA+AGG	0.427974	2_3:+39270449	None:intergenic
ATTTGCAAGTGTTCGGTTTG+CGG	0.429077	2_3:+39268859	None:intergenic
AGTTGATCCAAGGAATTGAA+TGG	0.434442	2_3:+39268821	None:intergenic
TTGTACAACTTCAGCAGTAC+TGG	0.437790	2_3:-39268604	Msa0291140:CDS
GAATTTGTTGACAATGCTAA+TGG	0.451627	2_3:+39268381	None:intergenic
AAGGCTGCAATGATTAAAAT+GGG	0.452725	2_3:-39268325	Msa0291140:CDS
GGACGGTTCCTTTAGGAAGA+AGG	0.460113	2_3:-39268892	Msa0291140:CDS
TACTGATCTAGTTGCACTCT+CGG	0.464956	2_3:-39268765	Msa0291140:CDS
AGAACAACTCTTGATCACTT+TGG	0.468970	2_3:+39268422	None:intergenic
AAACCATCCCTTCTTCCTAA+AGG	0.473767	2_3:+39268884	None:intergenic
TCAGCACAAGAAACTGTGTT+AGG	0.474603	2_3:+39269254	None:intergenic
AAGTAAGTTGTGTTAAGAGT+TGG	0.480928	2_3:+39268571	None:intergenic
GCATGCTTGCTAGTCTCGTC+AGG	0.492600	2_3:-39270341	Msa0291140:CDS
CTAATAAATAAGTTATAACT+AGG	0.500024	2_3:-39268113	Msa0291140:three_prime_UTR
TTTGTGCCAGGTCCACCATT+GGG	0.501871	2_3:+39268526	None:intergenic
ACTTGCAAATCAAAATCTTC+CGG	0.502470	2_3:-39268846	Msa0291140:CDS
GGTGTGCTAACAGGGACAAA+AGG	0.508960	2_3:-39268295	Msa0291140:CDS
TGTTAAAACGTTGCTAACAA+TGG	0.515318	2_3:+39270386	None:intergenic
AGTTGTGTTAAGAGTTGGAT+CGG	0.517053	2_3:+39268576	None:intergenic
TCAAATTTATCAGGAGTCGT+TGG	0.517441	2_3:+39268487	None:intergenic
TCCAAGGAATTGAATGGAGC+CGG	0.518137	2_3:+39268827	None:intergenic
GTTTGTGCCAGGTCCACCAT+TGG	0.522110	2_3:+39268525	None:intergenic
GCAATATTGGTGTGCTAACA+GGG	0.525835	2_3:-39268303	Msa0291140:CDS
CCTAAAGGAACCGTCCAACT+AGG	0.525895	2_3:+39268899	None:intergenic
TGATTCTACTATGGATGCTA+TGG	0.530449	2_3:+39268213	None:intergenic
TACAGGCACAAGGTCCTAGT+TGG	0.531508	2_3:-39268913	Msa0291140:intron
ATATGTCCCAATGGTGGACC+TGG	0.533119	2_3:-39268532	Msa0291140:CDS
AAAGCTGCATTTACTGCTCA+AGG	0.534506	2_3:-39268797	Msa0291140:CDS
GACGGTTCCTTTAGGAAGAA+GGG	0.540262	2_3:-39268891	Msa0291140:CDS
AGTTGTGCATCTGAGGAAAA+GGG	0.541172	2_3:+39270450	None:intergenic
TCGTTGGATCGAAATTGGTA+AGG	0.541757	2_3:+39268503	None:intergenic
TGCAGCTTTAAGTTGATCCA+AGG	0.550246	2_3:+39268811	None:intergenic
GTTGTGTTAAGAGTTGGATC+GGG	0.555195	2_3:+39268577	None:intergenic
ACACCACACCGAAGTTGCTA+AGG	0.567928	2_3:+39270503	None:intergenic
ACTGATCTAGTTGCACTCTC+GGG	0.568310	2_3:-39268764	Msa0291140:intron
CTAACAATGGAACTAACAGT+TGG	0.570134	2_3:+39270399	None:intergenic
CAACTAGATCAGTAGTATTG+AGG	0.571363	2_3:+39268774	None:intergenic
AATGAACTCCTTAGCAACTT+CGG	0.578201	2_3:-39270511	Msa0291140:CDS
TCCTATGCCTTGTATATGAG+AGG	0.580419	2_3:-39268069	Msa0291140:three_prime_UTR
GGGACTAAGTTGTGCATCTG+AGG	0.581590	2_3:+39270443	None:intergenic
TTCTACTATGGATGCTATGG+TGG	0.582608	2_3:+39268216	None:intergenic
AAATTGGTAAGGTTTGTGCC+AGG	0.593226	2_3:+39268514	None:intergenic
CGCACAATATGTCCCAATGG+TGG	0.595195	2_3:-39268538	Msa0291140:CDS
AACACGTCCTCTCATATACA+AGG	0.606360	2_3:+39268062	None:intergenic
GGCACAAGGTCCTAGTTGGA+CGG	0.608836	2_3:-39268909	Msa0291140:CDS
ATAGTAGAATCATTAGAGGA+TGG	0.616700	2_3:-39268202	Msa0291140:CDS
CTGCGCACAATATGTCCCAA+TGG	0.617077	2_3:-39268541	Msa0291140:CDS
GTTCCTTTAGGAAGAAGGGA+TGG	0.625949	2_3:-39268887	Msa0291140:CDS
TCCTCTCATATACAAGGCAT+AGG	0.636772	2_3:+39268068	None:intergenic
ACGAGACTAGCAAGCATGCG+AGG	0.661835	2_3:+39270345	None:intergenic
ACTCCTTAGCAACTTCGGTG+TGG	0.685852	2_3:-39270506	Msa0291140:CDS
AGTATTGTTCAGCAAAACTG+AGG	0.702311	2_3:+39269376	None:intergenic
ATATATATGTACCAGAACAG+AGG	0.710985	2_3:+39269205	None:intergenic
GCTGAAATAATACAGGCACA+AGG	0.714444	2_3:-39268923	Msa0291140:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAAAATATTATAATATAATA+TGG	-	chr2_3:39268323-39268342	Msa0291140:CDS	0.0%
!!!	TATAATTTTTCGAAAAAAAT+AGG	-	chr2_3:39268725-39268744	Msa0291140:intron	10.0%
!!!	ATAATTTTTCGAAAAAAATA+GGG	-	chr2_3:39268726-39268745	Msa0291140:intron	10.0%
!!!	TTTTTAGTTGTGTAATATAT+AGG	+	chr2_3:39268384-39268403	None:intergenic	15.0%
!!	ATATATTACACAACTAAAAA+TGG	-	chr2_3:39268384-39268403	Msa0291140:CDS	15.0%
!!	GAAATATATTCAAAGTATAA+CGG	-	chr2_3:39268952-39268971	Msa0291140:intron	15.0%
!!	AAATATATTCAAAGTATAAC+GGG	-	chr2_3:39268953-39268972	Msa0291140:intron	15.0%
!!!	CAGAAATATATTTAGAATTA+GGG	+	chr2_3:39269360-39269379	None:intergenic	15.0%
!!!	ACAGAAATATATTTAGAATT+AGG	+	chr2_3:39269361-39269380	None:intergenic	15.0%
!!	ATAAAAATATATATACGTTC+AGG	-	chr2_3:39269491-39269510	Msa0291140:intron	15.0%
!!!	TATATATTTTTCTCAATTTC+AGG	-	chr2_3:39269865-39269884	Msa0291140:intron	15.0%
!!	AGTTATAACTTATTTATTAG+TGG	+	chr2_3:39270425-39270444	None:intergenic	15.0%
!!	CTAATAAATAAGTTATAACT+AGG	-	chr2_3:39270425-39270444	Msa0291140:CDS	15.0%
!!!	TCCTTCTATTTTTAGTAAAT+GGG	+	chr2_3:39268530-39268549	None:intergenic	20.0%
!!!	TTCCTTCTATTTTTAGTAAA+TGG	+	chr2_3:39268531-39268550	None:intergenic	20.0%
!!	TGATATGTTGTTGATATAAA+AGG	-	chr2_3:39268639-39268658	Msa0291140:CDS	20.0%
!!	TAGTATTGTCTAAAAATTGA+AGG	-	chr2_3:39268805-39268824	Msa0291140:CDS	20.0%
!!	TTGAAATTTAATGATGAACA+AGG	+	chr2_3:39269393-39269412	None:intergenic	20.0%
!!!	TCTAATTTGACGTCTTTTTT+AGG	+	chr2_3:39268447-39268466	None:intergenic	25.0%
!	AAAAGACAAGTAATGTCAAA+AGG	+	chr2_3:39268485-39268504	None:intergenic	25.0%
!	TCCCATTTACTAAAAATAGA+AGG	-	chr2_3:39268526-39268545	Msa0291140:CDS	25.0%
!	ACTAAAAATAGAAGGAACAA+AGG	-	chr2_3:39268534-39268553	Msa0291140:CDS	25.0%
!!	AAAGTTGATTCATATACACT+TGG	+	chr2_3:39268831-39268850	None:intergenic	25.0%
!	TTTACTGAACTAGTAAAGTT+AGG	-	chr2_3:39268870-39268889	Msa0291140:CDS	25.0%
!!!	ACCTTTTTTAAACTTAACAG+TGG	-	chr2_3:39269001-39269020	Msa0291140:intron	25.0%
!	TCCACTGTTAAGTTTAAAAA+AGG	+	chr2_3:39269005-39269024	None:intergenic	25.0%
!!	GTTAGCAGTAACTTTTTAAT+AGG	-	chr2_3:39269050-39269069	Msa0291140:intron	25.0%
!	CGCATAAATTATAGAACATA+TGG	+	chr2_3:39269100-39269119	None:intergenic	25.0%
!!	ATGTGATCTATAATTTTCAC+AGG	-	chr2_3:39269130-39269149	Msa0291140:intron	25.0%
!!	TGTGATCTATAATTTTCACA+GGG	-	chr2_3:39269131-39269150	Msa0291140:intron	25.0%
!	CATAATATGTGCATTTGATA+TGG	-	chr2_3:39269458-39269477	Msa0291140:intron	25.0%
!	TAGTTCTTGTCAAATTTATC+AGG	+	chr2_3:39270063-39270082	None:intergenic	25.0%
!	ATGATTAAAATGGGCAATAT+TGG	-	chr2_3:39270222-39270241	Msa0291140:intron	25.0%
!!	CAAGTTTTGCTGTAAAAAGT+GGG	+	chr2_3:39268118-39268137	None:intergenic	30.0%
!!	ACAAGTTTTGCTGTAAAAAG+TGG	+	chr2_3:39268119-39268138	None:intergenic	30.0%
	TGTTAAAACGTTGCTAACAA+TGG	+	chr2_3:39268155-39268174	None:intergenic	30.0%
!	TTTAGTGGTAGAATGGTTTT+AGG	+	chr2_3:39268585-39268604	None:intergenic	30.0%
	TTTATTCCTTCTCTCTTTAG+TGG	+	chr2_3:39268600-39268619	None:intergenic	30.0%
!!	GTACTTCTCTTACTTTTCTT+AGG	+	chr2_3:39268700-39268719	None:intergenic	30.0%
	TTCGAAAAGACAATTTACAC+AGG	+	chr2_3:39268935-39268954	None:intergenic	30.0%
	AAAGGTCCTATAGAATACAA+GGG	+	chr2_3:39268987-39269006	None:intergenic	30.0%
	AAAAGGTCCTATAGAATACA+AGG	+	chr2_3:39268988-39269007	None:intergenic	30.0%
	ATATATATGTACCAGAACAG+AGG	+	chr2_3:39269336-39269355	None:intergenic	30.0%
	TACCTATGCTGAAATAATAC+AGG	-	chr2_3:39269608-39269627	Msa0291140:intron	30.0%
!!!	GATTTTGATTTGCAAGTGTT+CGG	+	chr2_3:39269689-39269708	None:intergenic	30.0%
	ACTTGCAAATCAAAATCTTC+CGG	-	chr2_3:39269692-39269711	Msa0291140:intron	30.0%
	AAGTAAGTTGTGTTAAGAGT+TGG	+	chr2_3:39269970-39269989	None:intergenic	30.0%
	TCCAATCTTCAAGTGAAAAA+GGG	-	chr2_3:39270087-39270106	Msa0291140:intron	30.0%
!!	GAATTTGTTGACAATGCTAA+TGG	+	chr2_3:39270160-39270179	None:intergenic	30.0%
	TAAGGCTGCAATGATTAAAA+TGG	-	chr2_3:39270212-39270231	Msa0291140:intron	30.0%
	AAGGCTGCAATGATTAAAAT+GGG	-	chr2_3:39270213-39270232	Msa0291140:intron	30.0%
	ATCCATAGTAGAATCATTAG+AGG	-	chr2_3:39270332-39270351	Msa0291140:CDS	30.0%
	ATCCTCTAATGATTCTACTA+TGG	+	chr2_3:39270337-39270356	None:intergenic	30.0%
	ATAGTAGAATCATTAGAGGA+TGG	-	chr2_3:39270336-39270355	Msa0291140:CDS	30.0%
	AATGAACTCCTTAGCAACTT+CGG	-	chr2_3:39268027-39268046	Msa0291140:intron	35.0%
!!!	GTTGTGTTTTTAGTTGTGCT+TGG	-	chr2_3:39268058-39268077	Msa0291140:three_prime_UTR	35.0%
	CTAACAATGGAACTAACAGT+TGG	+	chr2_3:39268142-39268161	None:intergenic	35.0%
!!	CTTTCATGACTGTTTTGTTC+TGG	-	chr2_3:39268225-39268244	Msa0291140:CDS	35.0%
	TAATATATAGGAGTTGCGCA+TGG	+	chr2_3:39268372-39268391	None:intergenic	35.0%
	TTCTCTCTTTAGTGGTAGAA+TGG	+	chr2_3:39268592-39268611	None:intergenic	35.0%
	ATTCTACCACTAAAGAGAGA+AGG	-	chr2_3:39268591-39268610	Msa0291140:CDS	35.0%
!	AGAGTACCCTTGTATTCTAT+AGG	-	chr2_3:39268978-39268997	Msa0291140:intron	35.0%
	AGTATTGTTCAGCAAAACTG+AGG	+	chr2_3:39269165-39269184	None:intergenic	35.0%
!	CCTCTTAGAGAGTTGTTATT+TGG	+	chr2_3:39269218-39269237	None:intergenic	35.0%
	CCAAATAACAACTCTCTAAG+AGG	-	chr2_3:39269215-39269234	Msa0291140:intron	35.0%
!	TAACAACTCTCTAAGAGGTT+TGG	-	chr2_3:39269220-39269239	Msa0291140:CDS	35.0%
	TATTTCGCGTGATATTCTCT+CGG	-	chr2_3:39269516-39269535	Msa0291140:intron	35.0%
	TGCCTGTATTATTTCAGCAT+AGG	+	chr2_3:39269613-39269632	None:intergenic	35.0%
	AGTTGATCCAAGGAATTGAA+TGG	+	chr2_3:39269720-39269739	None:intergenic	35.0%
	CAACTAGATCAGTAGTATTG+AGG	+	chr2_3:39269767-39269786	None:intergenic	35.0%
!	ATTTCAGGTGCTCATACATT+TGG	-	chr2_3:39269880-39269899	Msa0291140:intron	35.0%
	AGTTGTGTTAAGAGTTGGAT+CGG	+	chr2_3:39269965-39269984	None:intergenic	35.0%
	TCAAATTTATCAGGAGTCGT+TGG	+	chr2_3:39270054-39270073	None:intergenic	35.0%
	CTCCAATCTTCAAGTGAAAA+AGG	-	chr2_3:39270086-39270105	Msa0291140:intron	35.0%
!!	ACCCTTTTTCACTTGAAGAT+TGG	+	chr2_3:39270091-39270110	None:intergenic	35.0%
	AGAACAACTCTTGATCACTT+TGG	+	chr2_3:39270119-39270138	None:intergenic	35.0%
!!!	CTCAAAGAAAGCGTTTTGAT+CGG	+	chr2_3:39270187-39270206	None:intergenic	35.0%
	TGATTCTACTATGGATGCTA+TGG	+	chr2_3:39270328-39270347	None:intergenic	35.0%
!!!	GTGTTTTTAGTTGTGCTTGG+AGG	-	chr2_3:39268061-39268080	Msa0291140:three_prime_UTR	40.0%
	AGTTGTGCATCTGAGGAAAA+GGG	+	chr2_3:39268091-39268110	None:intergenic	40.0%
	AAGTTGTGCATCTGAGGAAA+AGG	+	chr2_3:39268092-39268111	None:intergenic	40.0%
	AGTAGTCAACTAAAGACGTG+TGG	+	chr2_3:39268263-39268282	None:intergenic	40.0%
	TCAGCACAAGAAACTGTGTT+AGG	+	chr2_3:39269287-39269306	None:intergenic	40.0%
	ATTTCGCGTGATATTCTCTC+GGG	-	chr2_3:39269517-39269536	Msa0291140:intron	40.0%
	GCTGAAATAATACAGGCACA+AGG	-	chr2_3:39269615-39269634	Msa0291140:intron	40.0%
	AAACCATCCCTTCTTCCTAA+AGG	+	chr2_3:39269657-39269676	None:intergenic	40.0%
!	ATTTGCAAGTGTTCGGTTTG+CGG	+	chr2_3:39269682-39269701	None:intergenic	40.0%
!!	TGCAGCTTTAAGTTGATCCA+AGG	+	chr2_3:39269730-39269749	None:intergenic	40.0%
	AAAGCTGCATTTACTGCTCA+AGG	-	chr2_3:39269741-39269760	Msa0291140:intron	40.0%
	TACTGATCTAGTTGCACTCT+CGG	-	chr2_3:39269773-39269792	Msa0291140:intron	40.0%
	TTGTACAACTTCAGCAGTAC+TGG	-	chr2_3:39269934-39269953	Msa0291140:intron	40.0%
	GTTGTGTTAAGAGTTGGATC+GGG	+	chr2_3:39269964-39269983	None:intergenic	40.0%
	AAATTGGTAAGGTTTGTGCC+AGG	+	chr2_3:39270027-39270046	None:intergenic	40.0%
	TCGTTGGATCGAAATTGGTA+AGG	+	chr2_3:39270038-39270057	None:intergenic	40.0%
	CAAGAGTTGTTCTCAACTTC+TGG	-	chr2_3:39270126-39270145	Msa0291140:intron	40.0%
!	CGCTTTCTTTGAGAGCTTTA+AGG	-	chr2_3:39270194-39270213	Msa0291140:intron	40.0%
	GCAATATTGGTGTGCTAACA+GGG	-	chr2_3:39270235-39270254	Msa0291140:intron	40.0%
	TTCTACTATGGATGCTATGG+TGG	+	chr2_3:39270325-39270344	None:intergenic	40.0%
	TCCTATGCCTTGTATATGAG+AGG	-	chr2_3:39270469-39270488	Msa0291140:CDS	40.0%
	TCCTCTCATATACAAGGCAT+AGG	+	chr2_3:39270473-39270492	None:intergenic	40.0%
	AACACGTCCTCTCATATACA+AGG	+	chr2_3:39270479-39270498	None:intergenic	40.0%
!	GACGGTTCCTTTAGGAAGAA+GGG	-	chr2_3:39269647-39269666	Msa0291140:intron	45.0%
!	GTTCCTTTAGGAAGAAGGGA+TGG	-	chr2_3:39269651-39269670	Msa0291140:intron	45.0%
	TCCAAGGAATTGAATGGAGC+CGG	+	chr2_3:39269714-39269733	None:intergenic	45.0%
	ACTGATCTAGTTGCACTCTC+GGG	-	chr2_3:39269774-39269793	Msa0291140:intron	45.0%
	AGGAGTCGTTGGATCGAAAT+TGG	+	chr2_3:39270043-39270062	None:intergenic	45.0%
	GGCAATATTGGTGTGCTAAC+AGG	-	chr2_3:39270234-39270253	Msa0291140:intron	45.0%
	ATGAGAGGACGTGTTCTTCT+TGG	-	chr2_3:39270484-39270503	Msa0291140:CDS	45.0%
!!	ATTTAATCATAATAAAAATA+AGG	+	chr2_3:39269557-39269576	None:intergenic	5.0%
	ACTCCTTAGCAACTTCGGTG+TGG	-	chr2_3:39268032-39268051	Msa0291140:intron	50.0%
	ACACCACACCGAAGTTGCTA+AGG	+	chr2_3:39268038-39268057	None:intergenic	50.0%
	GGGACTAAGTTGTGCATCTG+AGG	+	chr2_3:39268098-39268117	None:intergenic	50.0%
	TGCTCAAGCATCCTCTGTTC+TGG	-	chr2_3:39269322-39269341	Msa0291140:CDS	50.0%
	TACAGGCACAAGGTCCTAGT+TGG	-	chr2_3:39269625-39269644	Msa0291140:intron	50.0%
	CCTAAAGGAACCGTCCAACT+AGG	+	chr2_3:39269642-39269661	None:intergenic	50.0%
	CCTAGTTGGACGGTTCCTTT+AGG	-	chr2_3:39269639-39269658	Msa0291140:intron	50.0%
!	GGACGGTTCCTTTAGGAAGA+AGG	-	chr2_3:39269646-39269665	Msa0291140:intron	50.0%
	TCCGGCTCCATTCAATTCCT+TGG	-	chr2_3:39269710-39269729	Msa0291140:intron	50.0%
	CTGCGCACAATATGTCCCAA+TGG	-	chr2_3:39269997-39270016	Msa0291140:intron	50.0%
	CGCACAATATGTCCCAATGG+TGG	-	chr2_3:39270000-39270019	Msa0291140:intron	50.0%
!!	ATATGTCCCAATGGTGGACC+TGG	-	chr2_3:39270006-39270025	Msa0291140:intron	50.0%
	TTTGTGCCAGGTCCACCATT+GGG	+	chr2_3:39270015-39270034	None:intergenic	50.0%
	GGTGTGCTAACAGGGACAAA+AGG	-	chr2_3:39270243-39270262	Msa0291140:intron	50.0%
	ACGAGACTAGCAAGCATGCG+AGG	+	chr2_3:39268196-39268215	None:intergenic	55.0%
!	GCATGCTTGCTAGTCTCGTC+AGG	-	chr2_3:39268197-39268216	Msa0291140:CDS	55.0%
	GGCACAAGGTCCTAGTTGGA+CGG	-	chr2_3:39269629-39269648	Msa0291140:intron	55.0%
	GTTTGTGCCAGGTCCACCAT+TGG	+	chr2_3:39270016-39270035	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr2_3	gene	39267964	39270596	39267964	ID=Msa0291140;Name=Msa0291140
chr2_3	mRNA	39267964	39270596	39267964	ID=Msa0291140-mRNA-1;Parent=Msa0291140;Name=Msa0291140-mRNA-1;_AED=0.36;_eAED=0.36;_QI=64\|1\|1\|1\|0.75\|0.6\|5\|197\|355
chr2_3	exon	39267964	39268022	39267964	ID=Msa0291140-mRNA-1:exon:12753;Parent=Msa0291140-mRNA-1
chr2_3	exon	39268045	39268673	39268045	ID=Msa0291140-mRNA-1:exon:12752;Parent=Msa0291140-mRNA-1
chr2_3	exon	39268765	39268930	39268765	ID=Msa0291140-mRNA-1:exon:12751;Parent=Msa0291140-mRNA-1
chr2_3	exon	39269217	39269408	39269217	ID=Msa0291140-mRNA-1:exon:12750;Parent=Msa0291140-mRNA-1
chr2_3	exon	39270314	39270596	39270314	ID=Msa0291140-mRNA-1:exon:12749;Parent=Msa0291140-mRNA-1
chr2_3	five_prime_UTR	39270533	39270596	39270533	ID=Msa0291140-mRNA-1:five_prime_utr;Parent=Msa0291140-mRNA-1
chr2_3	CDS	39270314	39270532	39270314	ID=Msa0291140-mRNA-1:cds;Parent=Msa0291140-mRNA-1
chr2_3	CDS	39269217	39269408	39269217	ID=Msa0291140-mRNA-1:cds;Parent=Msa0291140-mRNA-1
chr2_3	CDS	39268765	39268930	39268765	ID=Msa0291140-mRNA-1:cds;Parent=Msa0291140-mRNA-1
chr2_3	CDS	39268183	39268673	39268183	ID=Msa0291140-mRNA-1:cds;Parent=Msa0291140-mRNA-1
chr2_3	three_prime_UTR	39268045	39268182	39268045	ID=Msa0291140-mRNA-1:three_prime_utr;Parent=Msa0291140-mRNA-1
chr2_3	three_prime_UTR	39267964	39268022	39267964	ID=Msa0291140-mRNA-1:three_prime_utr;Parent=Msa0291140-mRNA-1

Gene Sequence

>Msa0291140

ATGAACTCCTTAGCAACTTCGGTGTGGTGTGTTGTGTTTTTAGTTGTGCTTGGAGGACTACCCTTTTCCTCAGATGCACAACTTAGTCCCACTTTTTACAGCAAAACTTGTCCAACTGTTAGTTCCATTGTTAGCAACGTTTTAACAAATGTTTCTAAGACAGATCCTCGCATGCTTGCTAGTCTCGTCAGGCTTCACTTTCATGACTGTTTTGTTCTGGGATGTGATGCCTCAGTTTTGCTGAACAATACTGCTACAATCGTAAGCGAACAACAAGCTTTTCCAAATAACAACTCTCTAAGAGGTTTGGATGTTGTGAATCAGATCAAAACTGCTGTAGAAAGTGCTTGTCCTAACACAGTTTCTTGTGCTGATATTCTTGCACTTGCTGCTCAAGCATCCTCTGTTCTGGCACAAGGTCCTAGTTGGACGGTTCCTTTAGGAAGAAGGGATGGTTTAACCGCAAACCGAACACTTGCAAATCAAAATCTTCCGGCTCCATTCAATTCCTTGGATCAACTTAAAGCTGCATTTACTGCTCAAGGCCTCAATACTACTGATCTAGTTGCACTCTCGGGTGCTCATACATTTGGAAGAGCTCATTGCGCACAATTTGTTAGTCGATTGTACAACTTCAGCAGTACTGGAAGTCCCGATCCAACTCTTAACACAACTTACTTACAACAACTGCGCACAATATGTCCCAATGGTGGACCTGGCACAAACCTTACCAATTTCGATCCAACGACTCCTGATAAATTTGACAAGAACTATTACTCCAATCTTCAAGTGAAAAAGGGTTTGCTCCAAAGTGATCAAGAGTTGTTCTCAACTTCTGGTGCAGATACCATTAGCATTGTCAACAAATTCAGCACCGATCAAAACGCTTTCTTTGAGAGCTTTAAGGCTGCAATGATTAAAATGGGCAATATTGGTGTGCTAACAGGGACAAAAGGAGAGATTAGAAAACAATGCAACTTTGTGAACTCAAATTCTGCAGAACTAGATTTAGCCACCATAGCATCCATAGTAGAATCATTAGAGGATGGTATTGCTAGTGTAATATAA

Protein sequence

>Msa0291140

MNSLATSVWCVVFLVVLGGLPFSSDAQLSPTFYSKTCPTVSSIVSNVLTNVSKTDPRMLASLVRLHFHDCFVLGCDASVLLNNTATIVSEQQAFPNNNSLRGLDVVNQIKTAVESACPNTVSCADILALAAQASSVLAQGPSWTVPLGRRDGLTANRTLANQNLPAPFNSLDQLKAAFTAQGLNTTDLVALSGAHTFGRAHCAQFVSRLYNFSSTGSPDPTLNTTYLQQLRTICPNGGPGTNLTNFDPTTPDKFDKNYYSNLQVKKGLLQSDQELFSTSGADTISIVNKFSTDQNAFFESFKAAMIKMGNIGVLTGTKGEIRKQCNFVNSNSAELDLATIASIVESLEDGIASVI*