AlfalfaGEDB | Msa0318480

M. sativa cultivar zhongmu-4 / Msa0318480

KEGG: K00430
GO: GO:0000902 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0004601 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0006950 GO:0006952 GO:0006970 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009505 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009826 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010043 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016209 GO:0016491 GO:0016684 GO:0030312 GO:0031090 GO:0031347 GO:0031349 GO:0032502 GO:0032989 GO:0035821 GO:0040007 GO:0040008 GO:0042221 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044003 GO:0044237 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045088 GO:0045089 GO:0045926 GO:0048046 GO:0048518 GO:0048519 GO:0048583 GO:0048584 GO:0048589 GO:0048856 GO:0048869 GO:0050776 GO:0050778 GO:0050789 GO:0050832 GO:0050896 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052031 GO:0052033 GO:0052166 GO:0052167 GO:0052169 GO:0052173 GO:0052200 GO:0052255 GO:0052257 GO:0052305 GO:0052306 GO:0052308 GO:0052509 GO:0052510 GO:0052552 GO:0052553 GO:0052555 GO:0052556 GO:0052564 GO:0052572 GO:0055114 GO:0060560 GO:0065007 GO:0070887 GO:0071840 GO:0071944 GO:0072593 GO:0075136 GO:0080134 GO:0097237 GO:0098542 GO:0098588 GO:0098754 GO:0098805 GO:0098869 GO:1990748
PFAM: PF00141.26

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0318480	XP_003594495.2	99.155	355	3	0	1	355	1	355	0.0	717

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0318480	sp\|Q9LEH3\|PER15_IPOBA	65.347	303	104	1	24	325	21	323	1.30e-137	397

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0006700	Msa0318480	0.810322	1.221326e-50	-8.615850e-47
Msa0008850	Msa0318480	0.808715	2.702240e-50	-8.615850e-47
Msa0046360	Msa0318480	0.803593	3.237552e-49	-8.615850e-47
Msa0047470	Msa0318480	0.817960	2.514418e-52	-8.615850e-47
Msa0101060	Msa0318480	0.802561	5.290791e-49	-8.615850e-47
Msa0203180	Msa0318480	0.821339	4.256457e-53	-8.615850e-47
Msa0234180	Msa0318480	0.908017	2.705779e-81	-8.615850e-47
Msa0246300	Msa0318480	0.811469	6.893469e-51	-8.615850e-47
Msa0281940	Msa0318480	0.801133	1.039697e-48	-8.615850e-47
Msa0284870	Msa0318480	0.819566	1.085929e-52	-8.615850e-47
Msa0291140	Msa0318480	0.843769	1.143218e-58	-8.615850e-47
Msa0318480	Msa0323630	0.800158	1.643376e-48	-8.615850e-47
Msa0318480	Msa0362430	0.808997	2.351799e-50	-8.615850e-47
Msa0318480	Msa0417150	0.806719	7.176042e-50	-8.615850e-47
Msa0318480	Msa0549740	0.816096	6.594871e-52	-8.615850e-47
Msa0318480	Msa0553520	0.807996	3.847535e-50	-8.615850e-47
Msa0318480	Msa0558890	0.813654	2.294397e-51	-8.615850e-47
Msa0318480	Msa0583310	0.906460	1.449302e-80	-8.615850e-47
Msa0318480	Msa0607280	0.804577	2.020455e-49	-8.615850e-47
Msa0318480	Msa0615850	0.804423	2.175898e-49	-8.615850e-47
Msa0318480	Msa0620640	0.801212	1.001697e-48	-8.615850e-47
Msa0318480	Msa0643020	-0.809792	1.588077e-50	-8.615850e-47
Msa0318480	Msa0646390	0.811569	6.555800e-51	-8.615850e-47
Msa0318480	Msa0648300	0.800591	1.341576e-48	-8.615850e-47
Msa0318480	Msa0653710	0.815228	1.029539e-51	-8.615850e-47
Msa0318480	Msa0654060	0.817592	3.044901e-52	-8.615850e-47
Msa0318480	Msa0685880	0.810618	1.053740e-50	-8.615850e-47
Msa0318480	Msa0698900	0.817163	3.803042e-52	-8.615850e-47
Msa0318480	Msa0732200	0.806627	7.502397e-50	-8.615850e-47
Msa0318480	Msa0783270	0.820531	6.530001e-53	-8.615850e-47
Msa0318480	Msa0899700	0.827328	1.662659e-54	-8.615850e-47
Msa0318480	Msa0934830	0.815619	8.427143e-52	-8.615850e-47
Msa0318480	Msa0950410	0.802321	5.929597e-49	-8.615850e-47
Msa0318480	Msa0964680	0.825026	5.867723e-54	-8.615850e-47
Msa0318480	Msa0971860	0.809917	1.492945e-50	-8.615850e-47
Msa0318480	Msa0981680	0.910249	2.314063e-82	-8.615850e-47
Msa0318480	Msa1016130	0.808345	3.241857e-50	-8.615850e-47
Msa0318480	Msa1032350	0.807499	4.905655e-50	-8.615850e-47
Msa0318480	Msa1043870	0.801267	9.760024e-49	-8.615850e-47
Msa0318480	Msa1188820	0.804705	1.900127e-49	-8.615850e-47
Msa0318480	Msa1191390	0.819851	9.348382e-53	-8.615850e-47
Msa0318480	Msa1317710	0.800872	1.175715e-48	-8.615850e-47
Msa0318480	Msa1335720	0.807887	4.058263e-50	-8.615850e-47
Msa0318480	Msa1360380	0.803127	4.042788e-49	-8.615850e-47
Msa0318480	Msa1440180	0.812554	3.998619e-51	-8.615850e-47
Msa0318480	Msa1449740	0.813729	2.208354e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0318480	MtrunA17_Chr2g0292251	99.155	355	3	0	1	355	1	355	0.0	717
Msa0318480	MtrunA17_Chr2g0292241	80.392	357	65	2	1	354	1	355	0.0	587
Msa0318480	MtrunA17_Chr2g0292211	81.609	348	63	1	1	347	12	359	0.0	584
Msa0318480	MtrunA17_Chr2g0292181	81.739	345	58	2	1	342	10	352	0.0	578
Msa0318480	MtrunA17_Chr2g0291751	71.229	358	97	3	1	355	1	355	0.0	517
Msa0318480	MtrunA17_Chr2g0292111	70.950	358	98	3	1	355	1	355	0.0	511
Msa0318480	MtrunA17_Chr2g0292151	70.391	358	99	3	1	355	1	354	0.0	509
Msa0318480	MtrunA17_Chr2g0292271	70.455	352	96	3	4	353	6	351	4.69e-179	500
Msa0318480	MtrunA17_Chr2g0292261	71.629	356	92	4	1	353	1	350	6.94e-179	499
Msa0318480	MtrunA17_Chr2g0292091	68.358	335	99	1	1	335	4	331	6.15e-167	469
Msa0318480	MtrunA17_Chr2g0292291	67.529	348	105	4	7	353	11	351	1.70e-165	466
Msa0318480	MtrunA17_Chr2g0292101	67.470	332	101	1	4	335	8	332	4.03e-163	459
Msa0318480	MtrunA17_Chr7g0258811	59.259	324	127	2	7	329	52	371	1.07e-133	386
Msa0318480	MtrunA17_Chr1g0175561	56.575	327	139	2	4	329	2	326	2.61e-129	373
Msa0318480	MtrunA17_Chr5g0404721	52.318	302	143	1	28	329	30	330	4.13e-111	327
Msa0318480	MtrunA17_Chr4g0070951	51.057	331	157	3	2	330	3	330	5.77e-108	319
Msa0318480	MtrunA17_Chr8g0372601	50.165	303	150	1	28	330	30	331	7.02e-108	318
Msa0318480	MtrunA17_Chr5g0402581	48.916	323	155	4	8	329	13	326	7.22e-104	308
Msa0318480	MtrunA17_Chr2g0299691	48.773	326	160	3	8	330	38	359	8.94e-104	309
Msa0318480	MtrunA17_Chr2g0320071	46.933	326	164	2	4	329	1	317	2.65e-101	301
Msa0318480	MtrunA17_Chr5g0402571	47.059	323	161	4	8	329	13	326	1.56e-100	300
Msa0318480	MtrunA17_Chr1g0155611	49.338	302	153	0	28	329	46	347	5.60e-99	296
Msa0318480	MtrunA17_Chr3g0114451	46.462	325	163	3	7	329	3	318	4.46e-98	293
Msa0318480	MtrunA17_Chr3g0129051	48.287	321	152	4	7	325	10	318	1.05e-97	292
Msa0318480	MtrunA17_Chr2g0320101	46.012	326	167	2	4	329	1	317	2.18e-97	291
Msa0318480	MtrunA17_Chr3g0106921	47.853	326	155	5	7	329	7	320	6.60e-97	290
Msa0318480	MtrunA17_Chr2g0320031	47.706	327	162	3	4	329	1	319	9.35e-97	290
Msa0318480	MtrunA17_Chr7g0244461	48.026	304	149	2	26	329	18	312	9.88e-97	290
Msa0318480	MtrunA17_Chr4g0043391	47.305	334	161	5	1	329	1	324	7.77e-96	288
Msa0318480	MtrunA17_Chr4g0038151	48.297	323	152	6	11	329	10	321	1.41e-95	287
Msa0318480	MtrunA17_Chr4g0013201	48.387	310	151	2	20	329	38	338	1.98e-95	287
Msa0318480	MtrunA17_Chr2g0292281	64.378	233	68	4	121	353	18	235	2.77e-95	283
Msa0318480	MtrunA17_Chr5g0432441	46.970	330	160	5	4	329	8	326	4.32e-95	286
Msa0318480	MtrunA17_Chr2g0320091	45.872	327	167	3	4	329	1	318	4.33e-95	286
Msa0318480	MtrunA17_Chr4g0038171	48.607	323	151	6	11	329	10	321	8.67e-95	285
Msa0318480	MtrunA17_Chr4g0038161	48.607	323	150	6	11	329	10	320	9.16e-95	285
Msa0318480	MtrunA17_Chr4g0013171	47.950	317	154	4	15	329	14	321	3.72e-94	283
Msa0318480	MtrunA17_Chr2g0320051	45.706	326	169	2	4	329	1	318	4.53e-94	283
Msa0318480	MtrunA17_Chr2g0320061	45.399	326	170	2	4	329	1	318	6.91e-94	283
Msa0318480	MtrunA17_Chr5g0438021	45.679	324	163	4	8	329	13	325	4.27e-93	281
Msa0318480	MtrunA17_Chr3g0129061	47.095	327	162	3	1	325	1	318	1.66e-92	279
Msa0318480	MtrunA17_Chr7g0244451	45.897	329	165	3	1	329	1	316	6.99e-92	277
Msa0318480	MtrunA17_Chr5g0432351	45.370	324	166	4	11	331	8	323	7.42e-91	275
Msa0318480	MtrunA17_Chr5g0432341	45.342	322	165	4	11	329	8	321	1.04e-90	275
Msa0318480	MtrunA17_Chr4g0013191	48.534	307	146	5	26	329	43	340	1.15e-90	275
Msa0318480	MtrunA17_Chr3g0129041	47.734	331	159	4	1	329	4	322	1.68e-90	274
Msa0318480	MtrunA17_Chr4g0013181	48.667	300	143	4	32	329	63	353	7.39e-90	273
Msa0318480	MtrunA17_Chr4g0068621	45.545	303	160	3	28	329	38	336	9.59e-90	273
Msa0318480	MtrunA17_Chr1g0213061	43.385	325	171	5	8	330	9	322	3.74e-89	271
Msa0318480	MtrunA17_Chr2g0322861	43.925	321	171	6	11	329	73	386	1.19e-88	271
Msa0318480	MtrunA17_Chr4g0024121	44.514	319	173	3	12	329	11	326	1.62e-88	269
Msa0318480	MtrunA17_Chr5g0400331	45.752	306	162	2	28	329	26	331	1.65e-88	269
Msa0318480	MtrunA17_Chr3g0106901	46.057	317	162	2	13	329	16	323	2.49e-88	268
Msa0318480	MtrunA17_Chr5g0432331	47.557	307	150	5	26	329	54	352	3.20e-88	269
Msa0318480	MtrunA17_Chr7g0268501	43.558	326	178	4	4	329	1	320	1.09e-86	264
Msa0318480	MtrunA17_Chr7g0268521	43.558	326	178	4	4	329	1	320	1.09e-86	264
Msa0318480	MtrunA17_Chr2g0279041	46.026	302	152	5	32	329	31	325	3.16e-86	263
Msa0318480	MtrunA17_Chr4g0063671	43.478	322	169	6	13	329	7	320	5.12e-86	263
Msa0318480	MtrunA17_Chr5g0421411	45.552	281	148	5	54	330	7	286	1.33e-84	258
Msa0318480	MtrunA17_Chr4g0013821	41.883	308	174	3	28	335	28	330	9.78e-84	257
Msa0318480	MtrunA17_Chr3g0107881	44.136	324	171	3	9	329	8	324	2.59e-83	256
Msa0318480	MtrunA17_Chr4g0013721	42.444	311	174	3	23	333	95	400	3.61e-82	256
Msa0318480	MtrunA17_Chr7g0224371	39.450	327	188	3	4	330	7	323	2.61e-81	251
Msa0318480	MtrunA17_Chr3g0128061	40.938	320	186	2	12	330	10	327	4.55e-81	250
Msa0318480	MtrunA17_Chr4g0076211	43.960	298	156	6	33	329	46	333	1.75e-80	249
Msa0318480	MtrunA17_Chr7g0254201	41.639	305	169	5	26	330	18	313	7.66e-79	244
Msa0318480	MtrunA17_Chr5g0405991	42.208	308	168	7	23	329	18	316	1.01e-78	244
Msa0318480	MtrunA17_Chr2g0296621	42.997	307	163	6	25	330	47	342	1.49e-78	244
Msa0318480	MtrunA17_Chr1g0204011	42.345	307	169	5	24	329	23	322	4.56e-78	242
Msa0318480	MtrunA17_Chr8g0371381	41.722	302	168	5	28	329	26	319	5.16e-78	242
Msa0318480	MtrunA17_Chr4g0046131	42.295	305	169	5	27	326	41	343	1.18e-77	242
Msa0318480	MtrunA17_Chr1g0194151	40.122	329	187	4	7	329	9	333	8.51e-77	239
Msa0318480	MtrunA17_Chr1g0164891	42.384	302	168	5	32	329	93	392	1.19e-76	241
Msa0318480	MtrunA17_Chr1g0194271	41.018	334	184	5	7	329	9	340	1.37e-76	239
Msa0318480	MtrunA17_Chr1g0148021	43.974	307	164	5	27	329	26	328	1.85e-76	238
Msa0318480	MtrunA17_Chr6g0467121	42.508	327	166	8	28	351	74	381	2.14e-76	240
Msa0318480	MtrunA17_Chr7g0225221	41.667	324	174	5	11	329	7	320	2.31e-75	235
Msa0318480	MtrunA17_Chr6g0467161	42.157	306	163	6	28	331	45	338	2.52e-75	236
Msa0318480	MtrunA17_Chr4g0075241	40.000	320	182	5	15	329	13	327	8.49e-75	234
Msa0318480	MtrunA17_Chr4g0053871	43.034	323	168	7	8	325	9	320	1.20e-74	233
Msa0318480	MtrunA17_Chr5g0401431	41.424	309	174	4	24	328	23	328	3.41e-74	233
Msa0318480	MtrunA17_Chr4g0072091	43.564	303	161	5	27	325	23	319	2.92e-73	230
Msa0318480	MtrunA17_Chr1g0157051	39.571	326	189	5	4	329	1	318	5.24e-73	229
Msa0318480	MtrunA17_Chr1g0197411	39.144	327	193	4	8	330	7	331	2.16e-72	228
Msa0318480	MtrunA17_Chr2g0278671	41.158	311	171	6	24	329	20	323	1.30e-70	223
Msa0318480	MtrunA17_Chr1g0188431	39.404	302	170	6	28	329	39	327	2.97e-70	222
Msa0318480	MtrunA17_Chr6g0460711	39.564	321	181	7	11	329	5	314	3.14e-70	222
Msa0318480	MtrunA17_Chr2g0279061	46.565	262	129	5	72	329	12	266	5.61e-70	219
Msa0318480	MtrunA17_Chr5g0413051	39.936	313	173	9	26	329	71	377	1.65e-69	222
Msa0318480	MtrunA17_Chr7g0254231	40.584	308	165	8	26	330	20	312	2.08e-69	219
Msa0318480	MtrunA17_Chr8g0364291	38.226	327	187	5	7	329	9	324	3.75e-68	217
Msa0318480	MtrunA17_Chr6g0467251	40.333	300	166	6	28	325	36	324	4.02e-67	215
Msa0318480	MtrunA17_Chr2g0329641	38.462	312	174	7	27	330	35	336	2.43e-66	213
Msa0318480	MtrunA17_Chr6g0477071	36.556	331	187	7	7	329	27	342	9.79e-66	211
Msa0318480	MtrunA17_Chr3g0136751	39.934	303	172	4	26	325	23	318	2.82e-65	209
Msa0318480	MtrunA17_Chr5g0432401	37.654	324	152	4	8	328	9	285	2.49e-64	206
Msa0318480	MtrunA17_Chr6g0451571	38.907	311	179	7	24	329	30	334	9.18e-64	206
Msa0318480	MtrunA17_Chr1g0181511	37.217	309	183	4	26	331	25	325	4.39e-62	201
Msa0318480	MtrunA17_Chr2g0316481	35.843	332	178	7	26	325	74	402	1.56e-60	199
Msa0318480	MtrunA17_Chr2g0316791	35.241	332	180	7	26	325	74	402	2.44e-60	199
Msa0318480	MtrunA17_Chr2g0316831	35.542	332	179	7	26	325	110	438	3.67e-59	197
Msa0318480	MtrunA17_Chr2g0311251	35.224	335	181	7	26	328	9	339	2.45e-58	192
Msa0318480	MtrunA17_Chr1g0181431	36.570	309	185	4	26	331	25	325	2.96e-58	191
Msa0318480	MtrunA17_Chr2g0316191	35.030	334	181	7	26	326	74	404	6.99e-58	193
Msa0318480	MtrunA17_Chr4g0074851	35.873	315	191	4	23	334	27	333	5.33e-57	188
Msa0318480	MtrunA17_Chr1g0181481	36.570	309	185	4	26	331	25	325	5.60e-57	188
Msa0318480	MtrunA17_Chr2g0311241	31.746	378	181	7	26	330	58	431	3.35e-54	184
Msa0318480	MtrunA17_Chr3g0114461	45.789	190	95	2	140	329	11	192	1.53e-49	164
Msa0318480	MtrunA17_Chr4g0004591	32.087	321	156	4	28	328	77	355	1.31e-46	162
Msa0318480	MtrunA17_Chr2g0316811	37.168	226	124	3	28	236	50	274	8.38e-42	149
Msa0318480	MtrunA17_Chr2g0316141	32.877	292	141	10	73	330	10	280	6.06e-37	134
Msa0318480	MtrunA17_Chr2g0316181	32.877	292	141	10	73	330	10	280	6.06e-37	134
Msa0318480	MtrunA17_Chr3g0114491	53.636	110	51	0	27	136	17	126	1.19e-35	126
Msa0318480	MtrunA17_Chr1g0181501	35.052	194	115	4	141	331	6	191	3.20e-28	108
Msa0318480	MtrunA17_Chr3g0104101	39.860	143	81	5	192	330	9	150	1.97e-24	97.4
Msa0318480	MtrunA17_Chr5g0432321	42.742	124	63	2	149	272	17	132	1.33e-23	94.7
Msa0318480	MtrunA17_Chr7g0254181	37.097	124	75	1	71	194	2	122	1.53e-19	84.3
Msa0318480	MtrunA17_Chr6g0468731	56.338	71	27	2	67	137	22	88	1.36e-18	79.7
Msa0318480	MtrunA17_Chr1g0181491	40.741	108	62	2	25	132	9	114	6.48e-18	79.7
Msa0318480	MtrunA17_Chr5g0432361	42.529	87	49	1	242	328	23	108	1.04e-15	72.4
Msa0318480	MtrunA17_Chr1g0196191	50.000	88	39	3	62	147	21	105	1.35e-14	70.5
Msa0318480	MtrunA17_Chr7g0268491	41.414	99	54	3	231	329	3	97	3.28e-14	67.8
Msa0318480	MtrunA17_Chr3g0124821	26.236	263	156	8	62	313	121	356	8.20e-14	72.0
Msa0318480	MtrunA17_Chr4g0013811	41.667	72	42	0	140	211	7	78	3.68e-12	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0318480	AT5G06730.1	54.755	347	153	1	8	354	13	355	4.77e-133	384
Msa0318480	AT5G06720.1	56.832	322	139	0	8	329	12	333	1.71e-131	379
Msa0318480	AT2G38380.1	55.988	334	136	3	23	355	26	349	5.37e-130	376
Msa0318480	AT2G38390.1	54.655	333	140	3	24	355	27	349	1.99e-127	369
Msa0318480	AT3G32980.1	54.545	352	155	3	1	347	1	352	5.38e-127	369
Msa0318480	AT3G49120.1	55.000	340	148	3	13	347	14	353	3.19e-126	367
Msa0318480	AT3G49110.1	54.942	344	148	4	9	347	13	354	5.93e-125	363
Msa0318480	AT4G08770.1	55.000	320	142	2	24	341	20	339	2.79e-123	358
Msa0318480	AT4G08780.1	54.375	320	144	2	24	341	20	339	1.24e-121	355
Msa0318480	AT5G19880.1	50.152	329	159	3	4	329	3	329	9.98e-112	329
Msa0318480	AT2G18140.1	51.987	302	144	1	28	329	35	335	3.43e-109	323
Msa0318480	AT5G66390.1	49.675	308	154	1	22	329	27	333	2.70e-107	318
Msa0318480	AT2G18150.1	50.329	304	150	1	26	329	34	336	2.63e-106	315
Msa0318480	AT4G36430.1	50.000	308	153	1	23	330	25	331	2.01e-105	313
Msa0318480	AT5G19890.1	52.941	306	136	4	26	329	28	327	2.06e-104	310
Msa0318480	AT3G50990.1	49.191	309	156	1	23	331	36	343	3.52e-103	307
Msa0318480	AT1G44970.1	49.342	304	154	0	26	329	43	346	1.12e-100	301
Msa0318480	AT1G14550.1	50.327	306	142	5	26	329	24	321	8.78e-99	295
Msa0318480	AT1G14540.1	50.155	323	152	5	8	329	1	315	2.87e-98	294
Msa0318480	AT5G05340.1	47.883	307	149	3	25	329	27	324	4.59e-96	288
Msa0318480	AT1G68850.1	46.154	312	162	5	24	330	26	336	8.95e-94	283
Msa0318480	AT1G49570.1	47.213	305	156	3	26	327	46	348	2.15e-93	283
Msa0318480	AT4G16270.1	47.315	298	154	2	32	329	54	348	3.58e-92	280
Msa0318480	AT5G58390.1	46.154	325	163	5	8	329	1	316	5.02e-91	275
Msa0318480	AT2G35380.1	48.675	302	151	3	32	329	34	335	1.17e-90	275
Msa0318480	AT4G11290.1	41.745	321	183	3	11	329	8	326	3.80e-87	266
Msa0318480	AT5G58400.1	44.444	324	166	5	9	329	13	325	7.58e-86	263
Msa0318480	AT2G41480.1	43.827	324	169	6	11	329	13	328	8.79e-86	263
Msa0318480	AT3G03670.1	43.082	318	177	3	12	329	8	321	2.56e-85	261
Msa0318480	AT3G21770.1	42.405	316	176	4	17	330	18	329	8.82e-85	260
Msa0318480	AT1G71695.1	44.411	331	162	7	28	355	44	355	7.54e-84	258
Msa0318480	AT5G15180.1	41.141	333	188	6	1	329	1	329	1.70e-83	257
Msa0318480	AT1G05260.1	40.964	332	188	6	1	330	1	326	6.32e-83	255
Msa0318480	AT2G22420.1	40.060	332	188	4	8	339	9	329	5.54e-82	253
Msa0318480	AT5G64120.1	45.151	299	154	6	32	329	39	328	7.35e-82	253
Msa0318480	AT4G30170.1	43.831	308	162	4	26	329	25	325	5.24e-81	250
Msa0318480	AT2G18980.1	43.636	330	169	6	6	329	5	323	5.73e-81	250
Msa0318480	AT4G25980.1	43.689	309	163	5	26	329	24	326	1.24e-80	249
Msa0318480	AT3G01190.1	43.046	302	166	5	28	329	26	321	7.00e-80	247
Msa0318480	AT5G17820.1	42.138	318	169	8	13	329	10	313	4.51e-79	245
Msa0318480	AT5G14130.1	42.284	324	176	6	12	329	12	330	9.64e-79	244
Msa0318480	AT5G67400.1	42.415	323	179	4	11	329	10	329	2.06e-78	244
Msa0318480	AT3G49960.1	42.679	321	177	4	13	329	12	329	2.25e-78	243
Msa0318480	AT5G14130.2	42.284	324	176	6	12	329	53	371	2.82e-78	244
Msa0318480	AT5G17820.2	42.138	318	169	8	13	329	63	366	4.17e-78	244
Msa0318480	AT4G37530.1	42.903	310	170	4	24	329	23	329	3.21e-77	241
Msa0318480	AT5G51890.1	41.042	307	174	5	24	329	22	322	1.35e-76	239
Msa0318480	AT1G05240.1	42.434	304	161	5	32	329	30	325	1.53e-76	239
Msa0318480	AT1G05250.1	42.434	304	161	5	32	329	30	325	1.53e-76	239
Msa0318480	AT5G39580.1	44.482	299	157	6	32	329	29	319	1.38e-75	236
Msa0318480	AT4G33420.1	40.752	319	175	7	11	329	21	325	1.72e-74	233
Msa0318480	AT4G33420.2	40.752	319	175	7	11	329	68	372	7.11e-74	233
Msa0318480	AT5G42180.1	39.394	330	184	8	1	328	1	316	1.98e-72	228
Msa0318480	AT2G34060.1	40.523	306	173	6	27	326	41	343	1.09e-71	227
Msa0318480	AT5G64110.1	43.709	302	157	7	32	329	38	330	7.40e-71	224
Msa0318480	AT5G40150.1	39.873	316	173	5	20	329	24	328	8.66e-71	224
Msa0318480	AT4G37520.1	40.260	308	177	4	26	329	25	329	1.05e-70	224
Msa0318480	AT4G31760.1	39.062	320	184	5	13	329	15	326	4.43e-70	222
Msa0318480	AT3G28200.1	38.339	313	175	5	23	329	16	316	5.19e-70	222
Msa0318480	AT2G39040.1	41.346	312	172	6	25	329	43	350	2.97e-69	221
Msa0318480	AT4G37520.2	39.935	308	175	5	26	329	25	326	3.05e-69	220
Msa0318480	AT5G64100.1	41.196	301	164	7	32	329	41	331	8.43e-69	219
Msa0318480	AT1G77100.1	40.248	323	178	7	11	329	8	319	2.01e-68	218
Msa0318480	AT5G24070.1	40.260	308	165	7	34	333	43	339	4.29e-68	218
Msa0318480	AT2G24800.1	39.610	308	175	5	26	329	29	329	1.29e-67	216
Msa0318480	AT4G26010.1	40.514	311	163	8	23	329	17	309	1.49e-67	215
Msa0318480	AT4G33870.1	35.030	334	171	6	32	326	72	398	1.56e-67	218
Msa0318480	AT4G26010.2	40.584	308	161	8	26	329	48	337	2.66e-67	215
Msa0318480	AT1G24110.1	38.125	320	189	6	14	329	8	322	4.65e-67	214
Msa0318480	AT4G37530.2	44.961	258	137	3	24	277	23	279	7.46e-67	213
Msa0318480	AT2G43480.1	40.728	302	160	7	36	329	45	335	1.28e-66	214
Msa0318480	AT2G35380.2	47.368	247	126	3	87	329	1	247	2.73e-66	210
Msa0318480	AT1G30870.1	38.291	316	178	7	22	332	45	348	8.19e-66	212
Msa0318480	AT4G17690.1	38.889	306	176	5	28	330	26	323	1.96e-65	210
Msa0318480	AT5G47000.1	37.662	308	182	5	26	330	31	331	1.60e-63	206
Msa0318480	AT5G22410.1	36.000	325	186	10	12	326	10	322	4.30e-60	196
Msa0318480	AT1G34510.1	38.361	305	172	6	26	329	20	309	1.01e-59	195
Msa0318480	AT4G21960.1	36.964	303	180	4	32	331	35	329	7.21e-59	193
Msa0318480	AT3G17070.1	35.988	339	198	8	2	329	9	339	1.50e-56	187
Msa0318480	AT2G37130.1	34.951	309	189	5	25	329	27	327	7.64e-54	180
Msa0318480	AT2G37130.2	35.430	302	183	5	32	329	3	296	1.16e-53	179
Msa0318480	AT4G25980.2	42.857	217	115	4	24	235	67	279	2.16e-50	170
Msa0318480	AT3G17070.2	35.821	268	155	8	70	329	18	276	3.13e-41	146
Msa0318480	AT5G39580.2	47.368	171	85	3	32	202	29	194	1.82e-40	142
Msa0318480	AT2G24800.2	41.279	172	97	1	26	197	29	196	3.05e-37	134
Msa0318480	AT4G08390.3	25.974	308	179	11	26	313	83	361	1.46e-14	74.7
Msa0318480	AT4G08390.2	26.415	265	153	10	62	313	127	362	1.72e-14	74.3
Msa0318480	AT4G08390.5	26.415	265	153	10	62	313	127	362	1.72e-14	74.3
Msa0318480	AT4G08390.1	26.415	265	153	10	62	313	127	362	1.72e-14	74.3
Msa0318480	AT1G77490.2	26.336	262	155	8	62	312	106	340	8.77e-14	72.4
Msa0318480	AT3G09640.2	26.293	232	123	8	85	312	59	246	1.12e-13	70.5
Msa0318480	AT3G09640.1	26.293	232	123	8	85	312	59	246	1.12e-13	70.5
Msa0318480	AT1G77490.1	26.236	263	156	8	62	313	106	341	1.25e-13	72.0
Msa0318480	AT3G42570.1	31.683	101	68	1	96	195	49	149	1.75e-11	62.0

Find 70 sgRNAs with CRISPR-Local

Find 179 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCTCTTAAAGAGTTGTTATT+TGG	0.086448	2_4:-17452356	None:intergenic
CGCTTTCTTTGAGAGCTTTA+AGG	0.108597	2_4:+17453643	Msa0318480:CDS
CTCCAATCTTCAAGTGAAAA+AGG	0.168173	2_4:+17453535	Msa0318480:CDS
TAAGGCTGCAATGATTAAAA+TGG	0.175071	2_4:+17453661	Msa0318480:CDS
TAACAACTCTTTAAGAGGTT+TGG	0.292546	2_4:+17452361	Msa0318480:CDS
AGGAGTTGTTGGATCGAAAT+TGG	0.299793	2_4:-17453489	None:intergenic
CCAAATAACAACTCTTTAAG+AGG	0.326990	2_4:+17452356	Msa0318480:CDS
TCCGGCTCCATTCAATTCCT+TGG	0.334088	2_4:+17453158	Msa0318480:CDS
GGCAATATTGGTGTGCTAAC+GGG	0.337313	2_4:+17453683	Msa0318480:CDS
TAGTTCTTGTCAAATTTATC+AGG	0.341189	2_4:-17453509	None:intergenic
CTCTTAAAGAGTTGTTATTT+GGG	0.350081	2_4:-17452355	None:intergenic
ATGAGAGGACGTGTTCTTCT+TGG	0.350836	2_4:+17453933	Msa0318480:three_prime_UTR
ATTGAAATCTTGTGACTAGA+TGG	0.361275	2_4:+17453849	Msa0318480:three_prime_UTR
TGCTCAAGCATCCTCTGTTC+TGG	0.373097	2_4:+17452463	Msa0318480:CDS
ATGATTAAAATGGGCAATAT+TGG	0.376995	2_4:+17453671	Msa0318480:CDS
ATCCTCTAATGATTCTACTA+TGG	0.377320	2_4:-17453783	None:intergenic
CCTAGTTGGACAGTTCCTTT+AGG	0.383887	2_4:+17453087	Msa0318480:CDS
ATTTCAGGTGCTCATACGTT+TGG	0.396102	2_4:+17453329	Msa0318480:intron
ATCCATAGTAGAATCATTAG+AGG	0.411122	2_4:+17453781	Msa0318480:CDS
GCTCATTGCGCACAATTTGT+TGG	0.422197	2_4:+17453356	Msa0318480:CDS
TTCTACTATGGATGCTATAG+TGG	0.423866	2_4:-17453771	None:intergenic
AAGTTGTGCATCTGAGGAAA+AGG	0.427974	2_4:-17451187	None:intergenic
AGTTGATCCAAGGAATTGAA+TGG	0.434442	2_4:-17453165	None:intergenic
TTGTACAACTTCAGCAGTAC+TGG	0.437790	2_4:+17453383	Msa0318480:CDS
AAGGCTGCAATGATTAAAAT+GGG	0.452725	2_4:+17453662	Msa0318480:CDS
TCAAATTTATCAGGAGTTGT+TGG	0.456888	2_4:-17453500	None:intergenic
GGACAGTTCCTTTAGGAAGA+AGG	0.457817	2_4:+17453094	Msa0318480:CDS
GAATTTGTTGACAATACTAA+TGG	0.461765	2_4:-17453606	None:intergenic
TACTGATCTAGTTGCACTCT+CGG	0.464956	2_4:+17453221	Msa0318480:CDS
TTGCGCACAATATGTCCTAA+TGG	0.465521	2_4:+17453446	Msa0318480:CDS
CAAGAATTATTCTCAACATC+AGG	0.473757	2_4:+17453575	Msa0318480:CDS
TCAGCACAAGAAACTGTGTT+AGG	0.474603	2_4:-17452425	None:intergenic
AAACCATCCCTTCTTCCTAA+AGG	0.477418	2_4:-17453102	None:intergenic
AAGTAAGTTGTGTTAAGAGT+TGG	0.480928	2_4:-17453416	None:intergenic
GCATGCTTGCTAGTCTCGTC+AGG	0.492600	2_4:+17451295	Msa0318480:CDS
CTAATAAATAAGTTATAACT+AGG	0.500024	2_4:+17453874	Msa0318480:three_prime_UTR
TTCGTGCCAGGTCCACCATT+AGG	0.500527	2_4:-17453461	None:intergenic
ACTTGCAAATCAAAATCTTC+CGG	0.502470	2_4:+17453140	Msa0318480:CDS
GGGCAATATTGGTGTGCTAA+CGG	0.515401	2_4:+17453682	Msa0318480:CDS
AGTTGTGTTAAGAGTTGGAT+CGG	0.517053	2_4:-17453411	None:intergenic
TCCAAGGAATTGAATGGAGC+CGG	0.518137	2_4:-17453159	None:intergenic
TACAGGCACAAGGTCCTAGT+TGG	0.519137	2_4:+17453073	Msa0318480:intron
GACAGTTCCTTTAGGAAGAA+GGG	0.519926	2_4:+17453095	Msa0318480:CDS
CCTAAAGGAACTGTCCAACT+AGG	0.526146	2_4:-17453087	None:intergenic
TTGTTGGATCGAAATTGGTA+AGG	0.530982	2_4:-17453484	None:intergenic
AAAGCTGCATTTACTGCTCA+AGG	0.534506	2_4:+17453189	Msa0318480:CDS
AGTTGTGCATCTGAGGAAAA+GGG	0.541172	2_4:-17451186	None:intergenic
TGTTAAGACATTGCTAACAA+TGG	0.542625	2_4:-17451250	None:intergenic
ACTGATCTAGTTGCACTCTC+GGG	0.543472	2_4:+17453222	Msa0318480:CDS
TGCAGCTTTAAGTTGATCCA+AGG	0.550246	2_4:-17453175	None:intergenic
GTTGTGTTAAGAGTTGGATC+GGG	0.555195	2_4:-17453410	None:intergenic
CTAACAATGGAACTAACAGT+TGG	0.570134	2_4:-17451237	None:intergenic
GCAATATTGGTGTGCTAACG+GGG	0.571159	2_4:+17453684	Msa0318480:CDS
CAACTAGATCAGTAGTATTG+AGG	0.571363	2_4:-17453212	None:intergenic
ATATGTCCTAATGGTGGACC+TGG	0.579724	2_4:+17453455	Msa0318480:CDS
TCCTATGCCTTGTATATGAG+AGG	0.580419	2_4:+17453918	Msa0318480:three_prime_UTR
GGGACTAAGTTGTGCATCTG+AGG	0.581590	2_4:-17451193	None:intergenic
AAATTGGTAAGGTTCGTGCC+AGG	0.584556	2_4:-17453473	None:intergenic
GTTCCTTTAGGAAGAAGGGA+TGG	0.594643	2_4:+17453099	Msa0318480:CDS
ACACCACATAGAAGTTGCTA+AGG	0.602167	2_4:-17451133	None:intergenic
AACACGTCCTCTCATATACA+AGG	0.606360	2_4:-17453925	None:intergenic
GGTGTGCTAACGGGGACCAA+AGG	0.609621	2_4:+17453692	Msa0318480:CDS
ATAGTAGAATCATTAGAGGA+TGG	0.616700	2_4:+17453785	Msa0318480:CDS
CGCACAATATGTCCTAATGG+TGG	0.617356	2_4:+17453449	Msa0318480:CDS
ACTCCTTAGCAACTTCTATG+TGG	0.626841	2_4:+17451130	Msa0318480:CDS
TCCTCTCATATACAAGGCAT+AGG	0.636772	2_4:-17453919	None:intergenic
ACGAGACTAGCAAGCATGCG+AGG	0.661835	2_4:-17451291	None:intergenic
AGTATTGTTCAGCAAAACTG+AGG	0.702311	2_4:-17452303	None:intergenic
ATATATATGTACCAGAACAG+AGG	0.710985	2_4:-17452474	None:intergenic
GGTGAAATAATACAGGCACA+AGG	0.716926	2_4:+17453063	Msa0318480:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTTTTTTTTTTTTTTTT+AGG	-	chr2_4:17451562-17451581	None:intergenic	0.0%
!!	ATATAATATCATAATGATAA+TGG	+	chr2_4:17452590-17452609	Msa0318480:intron	10.0%
!!!	AGTGAAGTATTTTTTTTTTA+CGG	+	chr2_4:17452000-17452019	Msa0318480:intron	15.0%
!!!	TTATCTCATCTTTTATTTTA+TGG	+	chr2_4:17452058-17452077	Msa0318480:intron	15.0%
!!	ATATGAATATGAAATTGTAA+CGG	+	chr2_4:17452118-17452137	Msa0318480:intron	15.0%
!!	AAAACCTATTAAAAATTTAC+TGG	-	chr2_4:17452223-17452242	None:intergenic	15.0%
!!!	CAGAAATATATTTAGAATTA+GGG	-	chr2_4:17452501-17452520	None:intergenic	15.0%
!!!	ACAGAAATATATTTAGAATT+AGG	-	chr2_4:17452502-17452521	None:intergenic	15.0%
!!	AATGATCATATAGTTAATTA+AGG	+	chr2_4:17452628-17452647	Msa0318480:intron	15.0%
!!!	TTATCATCTTTGAAAATTAA+AGG	+	chr2_4:17452722-17452741	Msa0318480:intron	15.0%
!!!	TTTTGTAGTTTTTTTTTAGA+GGG	-	chr2_4:17452796-17452815	None:intergenic	15.0%
!!	CTAATAAATAAGTTATAACT+AGG	+	chr2_4:17453874-17453893	Msa0318480:three_prime_UTR	15.0%
!!!	AATGAAGATAGATCTTATTT+AGG	-	chr2_4:17451589-17451608	None:intergenic	20.0%
!!!	TCCTTCTATTTTTAGTAAAA+CGG	-	chr2_4:17451653-17451672	None:intergenic	20.0%
!!!	GTTACCAGTAAATTTTTAAT+AGG	+	chr2_4:17452216-17452235	Msa0318480:intron	20.0%
!!!	GTTTTGTAGTTTTTTTTTAG+AGG	-	chr2_4:17452797-17452816	None:intergenic	20.0%
!!	AAATAAAAAAAAATGACACG+TGG	-	chr2_4:17452909-17452928	None:intergenic	20.0%
!!!	TTTTTTTATTTTTTTCCCCT+TGG	+	chr2_4:17452918-17452937	Msa0318480:intron	20.0%
!!!	TTTTGTAGCTTTTTTTCTTA+GGG	+	chr2_4:17452948-17452967	Msa0318480:intron	20.0%
!!	TAAGCCAAAATTAAATACTA+AGG	+	chr2_4:17453016-17453035	Msa0318480:intron	20.0%
!!!	TTAGCCTTAGTATTTAATTT+TGG	-	chr2_4:17453023-17453042	None:intergenic	20.0%
!	TAATATATAGAAGTTGCGTA+AGG	-	chr2_4:17451493-17451512	None:intergenic	25.0%
!	TTAATTGAAGTTCGATCAAA+AGG	-	chr2_4:17451625-17451644	None:intergenic	25.0%
!!	TCCGTTTTACTAAAAATAGA+AGG	+	chr2_4:17451649-17451668	Msa0318480:intron	25.0%
!	AAATAGAAGGATTAGAACAA+AGG	+	chr2_4:17451662-17451681	Msa0318480:intron	25.0%
!!	TTTATTTCTTCTCTCTTTAG+TGG	-	chr2_4:17451720-17451739	None:intergenic	25.0%
!	CTAAAGAGAGAAGAAATAAA+TGG	+	chr2_4:17451720-17451739	Msa0318480:intron	25.0%
!	TAAAATGATACTTGTGTGAT+AGG	+	chr2_4:17451745-17451764	Msa0318480:intron	25.0%
!	TGATAGGTTGTTGAATTAAT+AGG	+	chr2_4:17451761-17451780	Msa0318480:intron	25.0%
!!	AGAAGTACAAATATAATTGC+TGG	+	chr2_4:17451836-17451855	Msa0318480:intron	25.0%
!	GAAGTACAAATATAATTGCT+GGG	+	chr2_4:17451837-17451856	Msa0318480:intron	25.0%
!	TAATTGCTGGGAAAAAAAAT+TGG	+	chr2_4:17451849-17451868	Msa0318480:intron	25.0%
!	AATTGCTGGGAAAAAAAATT+GGG	+	chr2_4:17451850-17451869	Msa0318480:intron	25.0%
!!!	TTTTGTTTTAGGGAATTCAT+AGG	+	chr2_4:17451900-17451919	Msa0318480:intron	25.0%
!!!	TTTGTTTTAGGGAATTCATA+GGG	+	chr2_4:17451901-17451920	Msa0318480:intron	25.0%
!	CGCATAAATTAAAGAACATA+TGG	-	chr2_4:17452267-17452286	None:intergenic	25.0%
!!!	CTCTTAAAGAGTTGTTATTT+GGG	-	chr2_4:17452358-17452377	None:intergenic	25.0%
!!!	GTTTTGTAGCTTTTTTTCTT+AGG	+	chr2_4:17452947-17452966	Msa0318480:intron	25.0%
!!!	TTTGTAGCTTTTTTTCTTAG+GGG	+	chr2_4:17452949-17452968	Msa0318480:intron	25.0%
!	TAGTTCTTGTCAAATTTATC+AGG	-	chr2_4:17453512-17453531	None:intergenic	25.0%
!!!	GAATTTGTTGACAATACTAA+TGG	-	chr2_4:17453609-17453628	None:intergenic	25.0%
!	ATGATTAAAATGGGCAATAT+TGG	+	chr2_4:17453671-17453690	Msa0318480:CDS	25.0%
!!	CAAGTTTTGCTGTAAAAAGT+GGG	-	chr2_4:17451216-17451235	None:intergenic	30.0%
!!	ACAAGTTTTGCTGTAAAAAG+TGG	-	chr2_4:17451217-17451236	None:intergenic	30.0%
	TGTTAAGACATTGCTAACAA+TGG	-	chr2_4:17451253-17451272	None:intergenic	30.0%
!!!	TTGCACTTCGTTTTGTTTTA+GGG	+	chr2_4:17451890-17451909	Msa0318480:intron	30.0%
	ACATTAACTAGTTGTCTTGA+AGG	+	chr2_4:17451950-17451969	Msa0318480:intron	30.0%
	TTTACGGAACTAGTAAAGTT+AGG	+	chr2_4:17452016-17452035	Msa0318480:intron	30.0%
	TCGAAAAAGACAATTTACAC+AGG	-	chr2_4:17452084-17452103	None:intergenic	30.0%
	AGAATACCCTTGTATTCTAT+AGG	+	chr2_4:17452144-17452163	Msa0318480:intron	30.0%
!	TTCTTTAATTTATGCGTCAC+AGG	+	chr2_4:17452271-17452290	Msa0318480:intron	30.0%
!	TCTTTAATTTATGCGTCACA+GGG	+	chr2_4:17452272-17452291	Msa0318480:intron	30.0%
!	CCTCTTAAAGAGTTGTTATT+TGG	-	chr2_4:17452359-17452378	None:intergenic	30.0%
	CCAAATAACAACTCTTTAAG+AGG	+	chr2_4:17452356-17452375	Msa0318480:CDS	30.0%
!	TAACAACTCTTTAAGAGGTT+TGG	+	chr2_4:17452361-17452380	Msa0318480:CDS	30.0%
	ATATATATGTACCAGAACAG+AGG	-	chr2_4:17452477-17452496	None:intergenic	30.0%
	TTAAGGTAGCTTCAAAATCT+AGG	+	chr2_4:17452645-17452664	Msa0318480:intron	30.0%
	TAAGGTAGCTTCAAAATCTA+GGG	+	chr2_4:17452646-17452665	Msa0318480:intron	30.0%
	AGATGATAAACTTCTCGAAA+TGG	-	chr2_4:17452711-17452730	None:intergenic	30.0%
!!!	TTTTATTTTTTTCCCCTTGG+AGG	+	chr2_4:17452921-17452940	Msa0318480:intron	30.0%
!!!	TTTATTTTTTTCCCCTTGGA+GGG	+	chr2_4:17452922-17452941	Msa0318480:intron	30.0%
	TACCTATGGTGAAATAATAC+AGG	+	chr2_4:17453056-17453075	Msa0318480:intron	30.0%
!!!	GATTTTGATTTGCAAGTGTT+CGG	-	chr2_4:17453137-17453156	None:intergenic	30.0%
	ACTTGCAAATCAAAATCTTC+CGG	+	chr2_4:17453140-17453159	Msa0318480:CDS	30.0%
	AAGTAAGTTGTGTTAAGAGT+TGG	-	chr2_4:17453419-17453438	None:intergenic	30.0%
	TCAAATTTATCAGGAGTTGT+TGG	-	chr2_4:17453503-17453522	None:intergenic	30.0%
	TCCAATCTTCAAGTGAAAAA+GGG	+	chr2_4:17453536-17453555	Msa0318480:CDS	30.0%
	CAAGAATTATTCTCAACATC+AGG	+	chr2_4:17453575-17453594	Msa0318480:CDS	30.0%
	TAAGGCTGCAATGATTAAAA+TGG	+	chr2_4:17453661-17453680	Msa0318480:CDS	30.0%
	AAGGCTGCAATGATTAAAAT+GGG	+	chr2_4:17453662-17453681	Msa0318480:CDS	30.0%
!	TTGTTTTCTAATCTCTCCTT+TGG	-	chr2_4:17453711-17453730	None:intergenic	30.0%
	ATCCATAGTAGAATCATTAG+AGG	+	chr2_4:17453781-17453800	Msa0318480:CDS	30.0%
	ATCCTCTAATGATTCTACTA+TGG	-	chr2_4:17453786-17453805	None:intergenic	30.0%
	ATAGTAGAATCATTAGAGGA+TGG	+	chr2_4:17453785-17453804	Msa0318480:CDS	30.0%
	ATTGAAATCTTGTGACTAGA+TGG	+	chr2_4:17453849-17453868	Msa0318480:three_prime_UTR	30.0%
	CTAACAATGGAACTAACAGT+TGG	-	chr2_4:17451240-17451259	None:intergenic	35.0%
!!	CTTTCATGACTGTTTTGTTC+TGG	+	chr2_4:17451323-17451342	Msa0318480:CDS	35.0%
	ATATAGAAGTTGCGTAAGGA+TGG	-	chr2_4:17451489-17451508	None:intergenic	35.0%
	GTTCGATCAAAAGGAAAGTA+AGG	-	chr2_4:17451616-17451635	None:intergenic	35.0%
	TTCTCTCTTTAGTGGTAGAA+TGG	-	chr2_4:17451712-17451731	None:intergenic	35.0%
!!!	CTTGCACTTCGTTTTGTTTT+AGG	+	chr2_4:17451889-17451908	Msa0318480:intron	35.0%
!	AGAAAGTTGATTCATACACC+TGG	-	chr2_4:17451976-17451995	None:intergenic	35.0%
	TCCACAGTTGAGTTTAAAAG+CGG	-	chr2_4:17452171-17452190	None:intergenic	35.0%
	AGTATTGTTCAGCAAAACTG+AGG	-	chr2_4:17452306-17452325	None:intergenic	35.0%
!	TCGCAACTTTGGAAAAGTTA+GGG	-	chr2_4:17452767-17452786	None:intergenic	35.0%
!	ATCGCAACTTTGGAAAAGTT+AGG	-	chr2_4:17452768-17452787	None:intergenic	35.0%
!	CTTTTCCAAAGTTGCGATTT+TGG	+	chr2_4:17452770-17452789	Msa0318480:intron	35.0%
	TGCCACAGTTACAAAACTTA+GGG	-	chr2_4:17452824-17452843	None:intergenic	35.0%
!	TTTTGTAACTGTGGCAGTTT+TGG	+	chr2_4:17452828-17452847	Msa0318480:intron	35.0%
	AGAGTAACACTCATTACCTA+TGG	+	chr2_4:17453042-17453061	Msa0318480:intron	35.0%
	TGCCTGTATTATTTCACCAT+AGG	-	chr2_4:17453061-17453080	None:intergenic	35.0%
	AGTTGATCCAAGGAATTGAA+TGG	-	chr2_4:17453168-17453187	None:intergenic	35.0%
	CAACTAGATCAGTAGTATTG+AGG	-	chr2_4:17453215-17453234	None:intergenic	35.0%
	ACATGATGTTTCTCGATTTC+AGG	+	chr2_4:17453314-17453333	Msa0318480:intron	35.0%
	AGTTGTGTTAAGAGTTGGAT+CGG	-	chr2_4:17453414-17453433	None:intergenic	35.0%
	TTGTTGGATCGAAATTGGTA+AGG	-	chr2_4:17453487-17453506	None:intergenic	35.0%
	CTCCAATCTTCAAGTGAAAA+AGG	+	chr2_4:17453535-17453554	Msa0318480:CDS	35.0%
	CCAATCTTCAAGTGAAAAAG+GGG	+	chr2_4:17453537-17453556	Msa0318480:CDS	35.0%
!!!	CTCAAAGAAAGCGTTTTGAT+CGG	-	chr2_4:17453636-17453655	None:intergenic	35.0%
	TTCTACTATGGATGCTATAG+TGG	-	chr2_4:17453774-17453793	None:intergenic	35.0%
	ACTCCTTAGCAACTTCTATG+TGG	+	chr2_4:17451130-17451149	Msa0318480:CDS	40.0%
	ACACCACATAGAAGTTGCTA+AGG	-	chr2_4:17451136-17451155	None:intergenic	40.0%
!!	GTTGTGCTTTTAGTTGTGCT+TGG	+	chr2_4:17451156-17451175	Msa0318480:CDS	40.0%
	AGTTGTGCATCTGAGGAAAA+GGG	-	chr2_4:17451189-17451208	None:intergenic	40.0%
	AAGTTGTGCATCTGAGGAAA+AGG	-	chr2_4:17451190-17451209	None:intergenic	40.0%
	AGCGGTCCTATAGAATACAA+GGG	-	chr2_4:17452153-17452172	None:intergenic	40.0%
	AAGCGGTCCTATAGAATACA+AGG	-	chr2_4:17452154-17452173	None:intergenic	40.0%
!!	ACCGCTTTTAAACTCAACTG+TGG	+	chr2_4:17452167-17452186	Msa0318480:intron	40.0%
	TCAGCACAAGAAACTGTGTT+AGG	-	chr2_4:17452428-17452447	None:intergenic	40.0%
!	GCAACTTTGGAAAAGTTAGG+GGG	-	chr2_4:17452765-17452784	None:intergenic	40.0%
!	CGCAACTTTGGAAAAGTTAG+GGG	-	chr2_4:17452766-17452785	None:intergenic	40.0%
	CCACAGTTACAAAACTTAGG+GGG	-	chr2_4:17452822-17452841	None:intergenic	40.0%
	GCCACAGTTACAAAACTTAG+GGG	-	chr2_4:17452823-17452842	None:intergenic	40.0%
	CTGCCACAGTTACAAAACTT+AGG	-	chr2_4:17452825-17452844	None:intergenic	40.0%
!!	ACCGAGTCAAAATTGGCTTT+GGG	-	chr2_4:17452856-17452875	None:intergenic	40.0%
!	CTTTCCCAAAGTTGCGATTT+TGG	-	chr2_4:17452975-17452994	None:intergenic	40.0%
!	ATCGCAACTTTGGGAAAGTT+AGG	+	chr2_4:17452977-17452996	Msa0318480:intron	40.0%
!	TCGCAACTTTGGGAAAGTTA+GGG	+	chr2_4:17452978-17452997	Msa0318480:intron	40.0%
	GGTGAAATAATACAGGCACA+AGG	+	chr2_4:17453063-17453082	Msa0318480:intron	40.0%
!	GACAGTTCCTTTAGGAAGAA+GGG	+	chr2_4:17453095-17453114	Msa0318480:CDS	40.0%
	AAACCATCCCTTCTTCCTAA+AGG	-	chr2_4:17453105-17453124	None:intergenic	40.0%
!!	TGCAGCTTTAAGTTGATCCA+AGG	-	chr2_4:17453178-17453197	None:intergenic	40.0%
	AAAGCTGCATTTACTGCTCA+AGG	+	chr2_4:17453189-17453208	Msa0318480:CDS	40.0%
	TACTGATCTAGTTGCACTCT+CGG	+	chr2_4:17453221-17453240	Msa0318480:CDS	40.0%
!	ATTTCAGGTGCTCATACGTT+TGG	+	chr2_4:17453329-17453348	Msa0318480:intron	40.0%
	TTGTACAACTTCAGCAGTAC+TGG	+	chr2_4:17453383-17453402	Msa0318480:CDS	40.0%
	GTTGTGTTAAGAGTTGGATC+GGG	-	chr2_4:17453413-17453432	None:intergenic	40.0%
	TTGCGCACAATATGTCCTAA+TGG	+	chr2_4:17453446-17453465	Msa0318480:CDS	40.0%
	AGGAGTTGTTGGATCGAAAT+TGG	-	chr2_4:17453492-17453511	None:intergenic	40.0%
!!	CCCCTTTTTCACTTGAAGAT+TGG	-	chr2_4:17453540-17453559	None:intergenic	40.0%
!	CGCTTTCTTTGAGAGCTTTA+AGG	+	chr2_4:17453643-17453662	Msa0318480:CDS	40.0%
	TCCTATGCCTTGTATATGAG+AGG	+	chr2_4:17453918-17453937	Msa0318480:three_prime_UTR	40.0%
	TCCTCTCATATACAAGGCAT+AGG	-	chr2_4:17453922-17453941	None:intergenic	40.0%
	AACACGTCCTCTCATATACA+AGG	-	chr2_4:17453928-17453947	None:intergenic	40.0%
!!	GTGCTTTTAGTTGTGCTTGG+AGG	+	chr2_4:17451159-17451178	Msa0318480:CDS	45.0%
	AGCAGTCAACTAAAGACGTG+TGG	-	chr2_4:17451361-17451380	None:intergenic	45.0%
	AACTAGTTGTCTTGAAGGCC+AGG	+	chr2_4:17451955-17451974	Msa0318480:intron	45.0%
	CAGTTACAAAACTTAGGGGG+CGG	-	chr2_4:17452819-17452838	None:intergenic	45.0%
!!	CCCCCTAAGTTTTGTAACTG+TGG	+	chr2_4:17452819-17452838	Msa0318480:intron	45.0%
!!	CCGAGTCAAAATTGGCTTTG+GGG	-	chr2_4:17452855-17452874	None:intergenic	45.0%
!!!	CCCCAAAGCCAATTTTGACT+CGG	+	chr2_4:17452852-17452871	Msa0318480:intron	45.0%
!	GACCGAGTCAAAATTGGCTT+TGG	-	chr2_4:17452857-17452876	None:intergenic	45.0%
	AGCGTAGACCGAGTCAAAAT+TGG	-	chr2_4:17452863-17452882	None:intergenic	45.0%
!!!	ATTTTTTTCCCCTTGGAGGG+CGG	+	chr2_4:17452925-17452944	Msa0318480:intron	45.0%
!	CGCAACTTTGGGAAAGTTAG+GGG	+	chr2_4:17452979-17452998	Msa0318480:intron	45.0%
!	GCAACTTTGGGAAAGTTAGG+GGG	+	chr2_4:17452980-17452999	Msa0318480:intron	45.0%
	CCTAAAGGAACTGTCCAACT+AGG	-	chr2_4:17453090-17453109	None:intergenic	45.0%
	CCTAGTTGGACAGTTCCTTT+AGG	+	chr2_4:17453087-17453106	Msa0318480:CDS	45.0%
!	GGACAGTTCCTTTAGGAAGA+AGG	+	chr2_4:17453094-17453113	Msa0318480:CDS	45.0%
!	GTTCCTTTAGGAAGAAGGGA+TGG	+	chr2_4:17453099-17453118	Msa0318480:CDS	45.0%
	TCCAAGGAATTGAATGGAGC+CGG	-	chr2_4:17453162-17453181	None:intergenic	45.0%
	ACTGATCTAGTTGCACTCTC+GGG	+	chr2_4:17453222-17453241	Msa0318480:CDS	45.0%
	CAGTAACGTCAACATCATCG+CGG	-	chr2_4:17453261-17453280	None:intergenic	45.0%
	GCTCATTGCGCACAATTTGT+TGG	+	chr2_4:17453356-17453375	Msa0318480:CDS	45.0%
	CGCACAATATGTCCTAATGG+TGG	+	chr2_4:17453449-17453468	Msa0318480:CDS	45.0%
!!	ATATGTCCTAATGGTGGACC+TGG	+	chr2_4:17453455-17453474	Msa0318480:CDS	45.0%
	AAATTGGTAAGGTTCGTGCC+AGG	-	chr2_4:17453476-17453495	None:intergenic	45.0%
	GGGCAATATTGGTGTGCTAA+CGG	+	chr2_4:17453682-17453701	Msa0318480:CDS	45.0%
	GGCAATATTGGTGTGCTAAC+GGG	+	chr2_4:17453683-17453702	Msa0318480:CDS	45.0%
	GCAATATTGGTGTGCTAACG+GGG	+	chr2_4:17453684-17453703	Msa0318480:CDS	45.0%
	ATGAGAGGACGTGTTCTTCT+TGG	+	chr2_4:17453933-17453952	Msa0318480:three_prime_UTR	45.0%
	GGGACTAAGTTGTGCATCTG+AGG	-	chr2_4:17451196-17451215	None:intergenic	50.0%
	TGCTCAAGCATCCTCTGTTC+TGG	+	chr2_4:17452463-17452482	Msa0318480:CDS	50.0%
	GAGGGCCAAAATCGCAACTT+TGG	-	chr2_4:17452778-17452797	None:intergenic	50.0%
	AGGGGCCAAAATCGCAACTT+TGG	+	chr2_4:17452967-17452986	Msa0318480:intron	50.0%
	GGGGCCAAAATCGCAACTTT+GGG	+	chr2_4:17452968-17452987	Msa0318480:intron	50.0%
	TACAGGCACAAGGTCCTAGT+TGG	+	chr2_4:17453073-17453092	Msa0318480:intron	50.0%
	TCCGGCTCCATTCAATTCCT+TGG	+	chr2_4:17453158-17453177	Msa0318480:CDS	50.0%
	ACGAGACTAGCAAGCATGCG+AGG	-	chr2_4:17451294-17451313	None:intergenic	55.0%
!	GCATGCTTGCTAGTCTCGTC+AGG	+	chr2_4:17451295-17451314	Msa0318480:CDS	55.0%
	GACACGTGGCACCTCACTTA+GGG	-	chr2_4:17452895-17452914	None:intergenic	55.0%
	TGACACGTGGCACCTCACTT+AGG	-	chr2_4:17452896-17452915	None:intergenic	55.0%
	CTACAAAACCGCCCTCCAAG+GGG	-	chr2_4:17452936-17452955	None:intergenic	55.0%
	GCTACAAAACCGCCCTCCAA+GGG	-	chr2_4:17452937-17452956	None:intergenic	55.0%
	AGCTACAAAACCGCCCTCCA+AGG	-	chr2_4:17452938-17452957	None:intergenic	55.0%
	TTCGTGCCAGGTCCACCATT+AGG	-	chr2_4:17453464-17453483	None:intergenic	55.0%
!!	TGACTCGGTCTACGCTGACG+TGG	+	chr2_4:17452867-17452886	Msa0318480:intron	60.0%
	CTGACGTGGCACCCTAAGTG+AGG	+	chr2_4:17452881-17452900	Msa0318480:intron	60.0%
	GGTGTGCTAACGGGGACCAA+AGG	+	chr2_4:17453692-17453711	Msa0318480:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr2_4	gene	17451066	17454009	17451066	ID=Msa0318480;Name=Msa0318480
chr2_4	mRNA	17451066	17454009	17451066	ID=Msa0318480-mRNA-1;Parent=Msa0318480;Name=Msa0318480-mRNA-1;_AED=0.39;_eAED=0.39;_QI=60\|1\|1\|1\|1\|1\|4\|183\|355
chr2_4	exon	17451066	17451344	17451066	ID=Msa0318480-mRNA-1:exon:6458;Parent=Msa0318480-mRNA-1
chr2_4	exon	17452293	17452484	17452293	ID=Msa0318480-mRNA-1:exon:6459;Parent=Msa0318480-mRNA-1
chr2_4	exon	17453078	17453243	17453078	ID=Msa0318480-mRNA-1:exon:6460;Parent=Msa0318480-mRNA-1
chr2_4	exon	17453336	17454009	17453336	ID=Msa0318480-mRNA-1:exon:6461;Parent=Msa0318480-mRNA-1
chr2_4	five_prime_UTR	17451066	17451125	17451066	ID=Msa0318480-mRNA-1:five_prime_utr;Parent=Msa0318480-mRNA-1
chr2_4	CDS	17451126	17451344	17451126	ID=Msa0318480-mRNA-1:cds;Parent=Msa0318480-mRNA-1
chr2_4	CDS	17452293	17452484	17452293	ID=Msa0318480-mRNA-1:cds;Parent=Msa0318480-mRNA-1
chr2_4	CDS	17453078	17453243	17453078	ID=Msa0318480-mRNA-1:cds;Parent=Msa0318480-mRNA-1
chr2_4	CDS	17453336	17453826	17453336	ID=Msa0318480-mRNA-1:cds;Parent=Msa0318480-mRNA-1
chr2_4	three_prime_UTR	17453827	17454009	17453827	ID=Msa0318480-mRNA-1:three_prime_utr;Parent=Msa0318480-mRNA-1

Gene Sequence

>Msa0318480

ATGAACTCCTTAGCAACTTCTATGTGGTGTGTTGTGCTTTTAGTTGTGCTTGGAGGACTACCCTTTTCCTCAGATGCACAACTTAGTCCCACTTTTTACAGCAAAACTTGTCCAACTGTTAGTTCCATTGTTAGCAATGTCTTAACAAATGTTTCTAAGACAGATCCTCGCATGCTTGCTAGTCTCGTCAGGCTTCACTTTCATGACTGTTTTGTTCTGGGATGTGATGCCTCAGTTTTGCTGAACAATACTGCTACGATCGTAAGTGAACAACAAGCTTTCCCAAATAACAACTCTTTAAGAGGTTTGGATGTTGTGAATCAGATCAAAACTGCTATAGAAAGTGCTTGTCCTAACACAGTTTCTTGTGCTGATATTCTTGCACTTGCTGCTCAAGCATCCTCTGTTCTGGCACAAGGTCCTAGTTGGACAGTTCCTTTAGGAAGAAGGGATGGTTTAACTGCAAACCGAACACTTGCAAATCAAAATCTTCCGGCTCCATTCAATTCCTTGGATCAACTTAAAGCTGCATTTACTGCTCAAGGCCTCAATACTACTGATCTAGTTGCACTCTCGGGTGCTCATACGTTTGGAAGAGCTCATTGCGCACAATTTGTTGGTCGATTGTACAACTTCAGCAGTACTGGAAGTCCCGATCCAACTCTTAACACAACTTACTTACAACAATTGCGCACAATATGTCCTAATGGTGGACCTGGCACGAACCTTACCAATTTCGATCCAACAACTCCTGATAAATTTGACAAGAACTATTACTCCAATCTTCAAGTGAAAAAGGGGTTGCTTCAAAGTGATCAAGAATTATTCTCAACATCAGGTGCAGATACCATTAGTATTGTCAACAAATTCAGCACCGATCAAAACGCTTTCTTTGAGAGCTTTAAGGCTGCAATGATTAAAATGGGCAATATTGGTGTGCTAACGGGGACCAAAGGAGAGATTAGAAAACAATGCAACTTTGTTAACTCAAATTCTGCAGAACTAGATTTAGCCACTATAGCATCCATAGTAGAATCATTAGAGGATGGTATTGCTAGTGTGATATAA

Protein sequence

>Msa0318480

MNSLATSMWCVVLLVVLGGLPFSSDAQLSPTFYSKTCPTVSSIVSNVLTNVSKTDPRMLASLVRLHFHDCFVLGCDASVLLNNTATIVSEQQAFPNNNSLRGLDVVNQIKTAIESACPNTVSCADILALAAQASSVLAQGPSWTVPLGRRDGLTANRTLANQNLPAPFNSLDQLKAAFTAQGLNTTDLVALSGAHTFGRAHCAQFVGRLYNFSSTGSPDPTLNTTYLQQLRTICPNGGPGTNLTNFDPTTPDKFDKNYYSNLQVKKGLLQSDQELFSTSGADTISIVNKFSTDQNAFFESFKAAMIKMGNIGVLTGTKGEIRKQCNFVNSNSAELDLATIASIVESLEDGIASVI*