AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0614390


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0614390 MtrunA17_Chr4g0050421 94.203 345 2 4 1 327 1 345 0.0 657
Msa0614390 MtrunA17_Chr5g0430001 64.497 338 94 5 1 327 1 323 2.07e-153 433
Msa0614390 MtrunA17_Chr5g0430011 67.628 312 79 5 29 327 22 324 4.25e-146 414
Msa0614390 MtrunA17_Chr5g0409121 65.233 279 84 3 62 327 52 330 1.03e-137 393
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0614390 AT5G64210.1 68.810 311 75 5 30 327 52 353 3.50e-153 434
Msa0614390 AT3G22370.1 64.333 300 84 4 48 327 58 354 8.68e-143 407
Msa0614390 AT3G22360.1 64.413 281 89 2 58 327 45 325 8.39e-137 391
Msa0614390 AT3G27620.1 67.300 263 75 2 76 327 67 329 9.70e-135 386
Msa0614390 AT1G32350.1 60.884 294 103 3 45 327 26 318 3.78e-133 382
Msa0614390 AT1G32350.2 61.172 273 100 2 45 312 26 297 6.56e-125 360
Msa0614390 AT4G22260.1 30.556 180 99 4 152 306 121 299 2.96e-15 75.9

Find 113 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTATGACATCTTTCAATT+TGG 0.225219 4_2:-63446337 None:intergenic
ACGTGGTTGTGTCGAGTTAT+TGG 0.242663 4_2:+63444900 Msa0614390:CDS
TTCTGGATAAAGTCGCTTAC+AGG 0.257073 4_2:+63445162 Msa0614390:CDS
AGCTCCTCTTGGTTATCATT+AGG 0.258014 4_2:+63448001 Msa0614390:CDS
ATCTTTCAATTTGGCATCCT+TGG 0.265673 4_2:-63446328 None:intergenic
CGTGGTTGTGTCGAGTTATT+GGG 0.294734 4_2:+63444901 Msa0614390:CDS
AACTTTGACGGTTAGAATTC+CGG 0.295362 4_2:-63444679 None:intergenic
GATAAGATCTGGAACATAAC+TGG 0.298266 4_2:+63448310 Msa0614390:three_prime_UTR
GCTCCTCTTGGTTATCATTA+GGG 0.299342 4_2:+63448002 Msa0614390:CDS
ATTCTGTATGATCAAAATAT+TGG 0.347173 4_2:-63448122 None:intergenic
GAAATGGTATGAGAGATTTC+TGG 0.357389 4_2:+63446110 Msa0614390:CDS
AGAAATCTCTCATACCATTT+CGG 0.371303 4_2:-63446108 None:intergenic
CAAGTTCTACCATAGTCATT+AGG 0.381374 4_2:-63446080 None:intergenic
GAGAAGAAGGAGGAGAGTTC+CGG 0.382377 4_2:+63444866 Msa0614390:CDS
CAACTCTATGAGCCACCTTT+GGG 0.383053 4_2:-63446188 None:intergenic
ACAACTCTATGAGCCACCTT+TGG 0.383957 4_2:-63446189 None:intergenic
ATCAAAATATTGGTGCTTAT+AGG 0.384018 4_2:-63448112 None:intergenic
AGCATCCCTCCAACCATTCC+AGG 0.387944 4_2:-63445970 None:intergenic
CTGCCATTGCAATAGACTAT+TGG 0.388788 4_2:+63446298 Msa0614390:CDS
AGGATGGAACAGAGTGGCCT+TGG 0.398321 4_2:+63444951 Msa0614390:CDS
CTCTACGCCGATGGCGGAAA+CGG 0.400110 4_2:+63444749 Msa0614390:CDS
AATGTATAGCTTCTTCTTCA+AGG 0.401405 4_2:-63446218 None:intergenic
TCACAACCGCCGAACTTTGA+CGG 0.414769 4_2:-63444691 None:intergenic
ACTGTTCTCTTGATAAGATC+TGG 0.421302 4_2:+63448299 Msa0614390:three_prime_UTR
TTCCTACACTGAGTATTTGA+AGG 0.429843 4_2:+63446239 Msa0614390:CDS
TCATTCGCGGCGGCGGAAAT+CGG 0.438546 4_2:+63444716 Msa0614390:CDS
GAAACAGTTGCAGCTGTCCC+TGG 0.444443 4_2:+63445952 Msa0614390:CDS
AACCACGTTATTCTTTGTTC+CGG 0.444667 4_2:-63444885 None:intergenic
TCTTTCAATTTGGCATCCTT+GGG 0.445531 4_2:-63446327 None:intergenic
CGCTGATGAGGCTCACCATC+GGG 0.449836 4_2:+63446368 Msa0614390:CDS
CCATCCTCTCTCATAATCTT+CGG 0.453617 4_2:-63444935 None:intergenic
AAGGTGGCTCATAGAGTTGT+TGG 0.454036 4_2:+63446192 Msa0614390:CDS
ATGATGCTTATTCAGATCAA+TGG 0.454262 4_2:-63445126 None:intergenic
GTGGCCTTGGAACTGCTTCA+TGG 0.462385 4_2:+63444964 Msa0614390:CDS
GAGGATGCACCTAATGACTA+TGG 0.466754 4_2:+63446071 Msa0614390:CDS
GAACCCTCCGTTTCCGCCAT+CGG 0.466915 4_2:-63444756 None:intergenic
GAATTCTAACCGTCAAAGTT+CGG 0.475373 4_2:+63444682 Msa0614390:CDS
ATTTCAGCATAGTGGTGGTT+GGG 0.477652 4_2:+63446017 Msa0614390:CDS
TTTCAAAATTAATGAACTGT+GGG 0.483872 4_2:-63448353 None:intergenic
GCAGTTCTTTACCGTGGAAG+TGG 0.484800 4_2:-63447968 None:intergenic
TAGAACTTGTGAAGCCGAAA+TGG 0.485630 4_2:+63446094 Msa0614390:CDS
TGTGAGGTCATTCGCGGCGG+CGG 0.486795 4_2:+63444709 Msa0614390:CDS
CCATTGCAATAGACTATTGG+AGG 0.495126 4_2:+63446301 Msa0614390:CDS
ACTTTATCCAGAAAATTCTT+CGG 0.501906 4_2:-63445152 None:intergenic
GCCTCCGTCTCTTCCGCTGA+CGG 0.506938 4_2:-63444824 None:intergenic
AATTTCAGCATAGTGGTGGT+TGG 0.511730 4_2:+63446016 Msa0614390:CDS
GCTGTCCCTGGAATGGTTGG+AGG 0.515427 4_2:+63445964 Msa0614390:CDS
TCTATTGCAATGGCAGGAGC+AGG 0.517572 4_2:-63446291 None:intergenic
CGGGACGCACCAGCTCCTCT+TGG 0.517676 4_2:+63447990 Msa0614390:CDS
CAATAGTCTATTGCAATGGC+AGG 0.522929 4_2:-63446297 None:intergenic
GTGGCTCGCCGAGCTTTGAT+CGG 0.523118 4_2:+63444653 Msa0614390:CDS
GCCGAGCTTTGATCGGTGGC+CGG 0.523135 4_2:+63444660 Msa0614390:CDS
GGCGGTTGTGAGGTCATTCG+CGG 0.528832 4_2:+63444703 Msa0614390:CDS
GACGGAGAAGAACGAGAAGA+AGG 0.529053 4_2:+63444853 Msa0614390:CDS
TAATGATAACCAAGAGGAGC+TGG 0.534076 4_2:-63447999 None:intergenic
GCATCCCTTAAAATAGAAAG+AGG 0.534522 4_2:+63448080 Msa0614390:three_prime_UTR
CCGAAGATTATGAGAGAGGA+TGG 0.536815 4_2:+63444935 Msa0614390:CDS
CTGGAACATAACTGGGTGAA+GGG 0.542432 4_2:+63448318 Msa0614390:three_prime_UTR
AGGTGGCTCATAGAGTTGTT+GGG 0.545630 4_2:+63446193 Msa0614390:CDS
TCCGGCCACCGATCAAAGCT+CGG 0.550176 4_2:-63444661 None:intergenic
ACGCCGATGGCGGAAACGGA+GGG 0.558279 4_2:+63444753 Msa0614390:CDS
AACAGTCATTCGCGCTGATG+AGG 0.563488 4_2:+63446356 Msa0614390:CDS
TACGCCGATGGCGGAAACGG+AGG 0.565606 4_2:+63444752 Msa0614390:CDS
CTTCCACGGTAAAGAACTGC+GGG 0.566723 4_2:+63447971 Msa0614390:CDS
TCTTCCGCTGACGGCTTCGA+CGG 0.570169 4_2:-63444815 None:intergenic
GTGGTTGTGTCGAGTTATTG+GGG 0.571030 4_2:+63444902 Msa0614390:CDS
GCAGCTGTCCCTGGAATGGT+TGG 0.572427 4_2:+63445961 Msa0614390:CDS
CAGAGGCATCTCTACGCCGA+TGG 0.573886 4_2:+63444740 Msa0614390:CDS
TTGAAGAAGCAGAGAATGAG+AGG 0.575067 4_2:+63446052 Msa0614390:CDS
AGTTTCGTAATGCAAACTAA+AGG 0.576464 4_2:-63448052 None:intergenic
ATAAGATCTGGAACATAACT+GGG 0.582846 4_2:+63448311 Msa0614390:three_prime_UTR
TATTTGAAGGACATTGATAG+TGG 0.587742 4_2:+63446252 Msa0614390:CDS
TTTGATTGATAAGTCTCCCA+TGG 0.588432 4_2:-63445098 None:intergenic
GCGCTGATGAGGCTCACCAT+CGG 0.590135 4_2:+63446367 Msa0614390:CDS
CGAAAATTTCAGCATAGTGG+TGG 0.590958 4_2:+63446012 Msa0614390:CDS
GAAGCCGTCAGCGGAAGAGA+CGG 0.591549 4_2:+63444820 Msa0614390:CDS
CTGTTTCGAGCATCATTGCA+CGG 0.591594 4_2:-63445936 None:intergenic
GTCAAAGTTCGGCGGTTGTG+AGG 0.592006 4_2:+63444693 Msa0614390:CDS
TTACATACTTTCCCCAAAGG+TGG 0.592089 4_2:+63446176 Msa0614390:CDS
CTGTCCCTGGAATGGTTGGA+GGG 0.593126 4_2:+63445965 Msa0614390:CDS
CTCCGAAAATTTCAGCATAG+TGG 0.594257 4_2:+63446009 Msa0614390:CDS
TCTGGAACATAACTGGGTGA+AGG 0.594436 4_2:+63448317 Msa0614390:three_prime_UTR
CGGCGGCGGAAATCGGCCAG+AGG 0.595135 4_2:+63444723 Msa0614390:CDS
AACTCTATGAGCCACCTTTG+GGG 0.595501 4_2:-63446187 None:intergenic
TTCAAAATTAATGAACTGTG+GGG 0.596562 4_2:-63448352 None:intergenic
ACTTTACATACTTTCCCCAA+AGG 0.601341 4_2:+63446173 Msa0614390:CDS
GCCGTCAGCGGAAGAGACGG+AGG 0.603586 4_2:+63444823 Msa0614390:CDS
CATCGGCGTAGAGATGCCTC+TGG 0.604415 4_2:-63444739 None:intergenic
ATGCAGGATATCCACTTCCA+CGG 0.604624 4_2:+63447957 Msa0614390:intron
AGGCATCTCTACGCCGATGG+CGG 0.606114 4_2:+63444743 Msa0614390:CDS
AGAGACGGAGGCGAAATCGA+CGG 0.606512 4_2:+63444835 Msa0614390:CDS
TGCGCCGTCGAAGCCGTCAG+CGG 0.609125 4_2:+63444811 Msa0614390:CDS
GAGGCCGAAGATTATGAGAG+AGG 0.612635 4_2:+63444931 Msa0614390:CDS
GGAGAAGAACGAGAAGAAGG+AGG 0.617945 4_2:+63444856 Msa0614390:CDS
TGGAACATAACTGGGTGAAG+GGG 0.619345 4_2:+63448319 Msa0614390:three_prime_UTR
GTTACCATGAAGCAGTTCCA+AGG 0.624690 4_2:-63444968 None:intergenic
GCTCGCCGAGCTTTGATCGG+TGG 0.625356 4_2:+63444656 Msa0614390:CDS
AGTTGCAGCTGTCCCTGGAA+TGG 0.626357 4_2:+63445957 Msa0614390:CDS
AGACTATTGGAGGCTTCCCA+AGG 0.628882 4_2:+63446311 Msa0614390:CDS
GCATCCCTCCAACCATTCCA+GGG 0.636143 4_2:-63445969 None:intergenic
GTCCTTCAAATACTCAGTGT+AGG 0.637701 4_2:-63446241 None:intergenic
CGTCCCGCAGTTCTTTACCG+TGG 0.639191 4_2:-63447974 None:intergenic
TGTAACTCTCACATTAAACA+TGG 0.640366 4_2:-63448271 None:intergenic
CCTCCAATAGTCTATTGCAA+TGG 0.640373 4_2:-63446301 None:intergenic
GCATTCAGCATTGTGTTACG+TGG 0.641705 4_2:+63444634 Msa0614390:CDS
TTCTAACCGTCAAAGTTCGG+CGG 0.651224 4_2:+63444685 Msa0614390:CDS
TGGTTGTGTCGAGTTATTGG+GGG 0.651952 4_2:+63444903 Msa0614390:CDS
CGAAGTGGTTCACATCCCGA+TGG 0.653019 4_2:-63446383 None:intergenic
AAGCCCTAATGATAACCAAG+AGG 0.665170 4_2:-63448005 None:intergenic
ACTTCCACGGTAAAGAACTG+CGG 0.706975 4_2:+63447970 Msa0614390:CDS
GGTTGTGAGGTCATTCGCGG+CGG 0.720769 4_2:+63444706 Msa0614390:CDS
TGAGAGAGGATGGAACAGAG+TGG 0.750950 4_2:+63444945 Msa0614390:CDS
TTCCGGAACAAAGAATAACG+TGG 0.755903 4_2:+63444883 Msa0614390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+GGG - chr4_2:63445727-63445746 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr4_2:63445728-63445747 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTTATTCC+TGG + chr4_2:63445821-63445840 Msa0614390:intron 10.0%
!! TTACAAAAAAATAGTATAAA+CGG - chr4_2:63448193-63448212 None:intergenic 10.0%
!! TATCATCTTACATTTATTTA+CGG + chr4_2:63446479-63446498 Msa0614390:intron 15.0%
!!! TCATAGTTGTTTTAAAATAA+AGG + chr4_2:63447808-63447827 Msa0614390:intron 15.0%
!!! TTTCTTTTTTATAATAATGC+TGG + chr4_2:63447881-63447900 Msa0614390:intron 15.0%
!!! TTTGCTATATATGAATGAAA+GGG + chr4_2:63445458-63445477 Msa0614390:intron 20.0%
!! TAGCGTCATATATATATATA+TGG + chr4_2:63445517-63445536 Msa0614390:intron 20.0%
!! AGCGTCATATATATATATAT+GGG + chr4_2:63445518-63445537 Msa0614390:intron 20.0%
!!! TAACAAAATTTTGTATTTCC+AGG - chr4_2:63445842-63445861 None:intergenic 20.0%
!! ATAAATGTAAGATGATATGT+TGG - chr4_2:63446476-63446495 None:intergenic 20.0%
!! ACATGAAAACTGTAAAATTT+AGG + chr4_2:63446588-63446607 Msa0614390:intron 20.0%
!! TAAGTAAAGCTTCATTATTT+GGG - chr4_2:63446839-63446858 None:intergenic 20.0%
!! ATAAGTAAAGCTTCATTATT+TGG - chr4_2:63446840-63446859 None:intergenic 20.0%
!!! TTTACTTATATCCAACTTTT+AGG + chr4_2:63446851-63446870 Msa0614390:intron 20.0%
!!! TTACTTATATCCAACTTTTA+GGG + chr4_2:63446852-63446871 Msa0614390:intron 20.0%
!! GGAATTGTATTATAAAAACA+GGG - chr4_2:63447929-63447948 None:intergenic 20.0%
!!! TTATCCTCTTTCTATTTTAA+GGG - chr4_2:63448087-63448106 None:intergenic 20.0%
!!! TTTATCCTCTTTCTATTTTA+AGG - chr4_2:63448088-63448107 None:intergenic 20.0%
!! ATTCTGTATGATCAAAATAT+TGG - chr4_2:63448125-63448144 None:intergenic 20.0%
!!! TTATGTTTTGATCATATGTT+TGG + chr4_2:63448147-63448166 Msa0614390:three_prime_UTR 20.0%
!!! TTAAACATGGTTTTCAAATT+AGG - chr4_2:63448261-63448280 None:intergenic 20.0%
!! TTTCAAAATTAATGAACTGT+GGG - chr4_2:63448356-63448375 None:intergenic 20.0%
!!! TTTTCAAAATTAATGAACTG+TGG - chr4_2:63448357-63448376 None:intergenic 20.0%
!!! CAGTTCATTAATTTTGAAAA+AGG + chr4_2:63448357-63448376 Msa0614390:three_prime_UTR 20.0%
!!! ATTGTTTTTTCGCTAATTCA+TGG + chr4_2:63445023-63445042 Msa0614390:intron 25.0%
! TAATTCATGGTTTCTATAAG+TGG + chr4_2:63445036-63445055 Msa0614390:intron 25.0%
! ACTTTATCCAGAAAATTCTT+CGG - chr4_2:63445155-63445174 None:intergenic 25.0%
!! TTTGTTATGGATCATACAAT+AGG - chr4_2:63445266-63445285 None:intergenic 25.0%
!! TCTTCTCTTTTCTTTTGTTA+TGG - chr4_2:63445279-63445298 None:intergenic 25.0%
!!! GTTTGCTATATATGAATGAA+AGG + chr4_2:63445457-63445476 Msa0614390:intron 25.0%
! TTTATGTGCTCTTAAGAAAT+TGG + chr4_2:63445488-63445507 Msa0614390:intron 25.0%
! ATAAAAGACACCTTCATAAA+AGG + chr4_2:63445686-63445705 Msa0614390:intron 25.0%
!!! TTTTGTTATGATGTTCTTCA+TGG + chr4_2:63445854-63445873 Msa0614390:intron 25.0%
! TGTTATGACATCTTTCAATT+TGG - chr4_2:63446340-63446359 None:intergenic 25.0%
! AACTTGTGATCTCAATATAT+TGG + chr4_2:63446541-63446560 Msa0614390:intron 25.0%
! AAAACTGTAAAATTTAGGCT+TGG + chr4_2:63446593-63446612 Msa0614390:intron 25.0%
!! TAAAATTTAGGCTTGGTATA+AGG + chr4_2:63446600-63446619 Msa0614390:intron 25.0%
! GTATAAGGTAATATACACAA+AGG + chr4_2:63446615-63446634 Msa0614390:intron 25.0%
! TGTTGCTATAATCTTTACAA+AGG + chr4_2:63446723-63446742 Msa0614390:intron 25.0%
! GTTGCTATAATCTTTACAAA+GGG + chr4_2:63446724-63446743 Msa0614390:intron 25.0%
!!! GTAAGAAATTTTAACCACTT+GGG + chr4_2:63446877-63446896 Msa0614390:intron 25.0%
! ATTCCAAATAACAATGCAAA+AGG + chr4_2:63447033-63447052 Msa0614390:intron 25.0%
!!! AATTATTTTAAGAGATGTCG+TGG + chr4_2:63447359-63447378 Msa0614390:intron 25.0%
!! TGTAGTGCTTAATTATGTTT+TGG + chr4_2:63447425-63447444 Msa0614390:intron 25.0%
! AAAAAAAATTGTAACCACCT+TGG + chr4_2:63447671-63447690 Msa0614390:intron 25.0%
! AGAACTTAGTTTAAAGAAAG+TGG + chr4_2:63447781-63447800 Msa0614390:intron 25.0%
! CGGAATTGTATTATAAAAAC+AGG - chr4_2:63447930-63447949 None:intergenic 25.0%
!! ATCAAAATATTGGTGCTTAT+AGG - chr4_2:63448115-63448134 None:intergenic 25.0%
! TTCAAAATTAATGAACTGTG+GGG - chr4_2:63448355-63448374 None:intergenic 25.0%
ATGATGCTTATTCAGATCAA+TGG - chr4_2:63445129-63445148 None:intergenic 30.0%
ACCTTAAAAAACACATCAGT+GGG - chr4_2:63445209-63445228 None:intergenic 30.0%
! TTTTAACAAGTCACACCTTA+AGG + chr4_2:63445571-63445590 Msa0614390:intron 30.0%
AAAGTGAAAATCACACCTTA+AGG - chr4_2:63445589-63445608 None:intergenic 30.0%
ACACCTTCATAAAAGTAAGT+TGG + chr4_2:63445631-63445650 Msa0614390:intron 30.0%
!! ACACCAACTTACTTTTATGA+AGG - chr4_2:63445637-63445656 None:intergenic 30.0%
! ATAGAAGACACCTTTTATGA+AGG - chr4_2:63445699-63445718 None:intergenic 30.0%
! AACGTCTCTGAAAATATTCA+TGG - chr4_2:63445909-63445928 None:intergenic 30.0%
! GAATATTTTCAGAGACGTTA+TGG + chr4_2:63445910-63445929 Msa0614390:intron 30.0%
AGAAATCTCTCATACCATTT+CGG - chr4_2:63446111-63446130 None:intergenic 30.0%
AATGTATAGCTTCTTCTTCA+AGG - chr4_2:63446221-63446240 None:intergenic 30.0%
TATTTGAAGGACATTGATAG+TGG + chr4_2:63446252-63446271 Msa0614390:CDS 30.0%
! AGAAGTATATGACTACCATA+AGG + chr4_2:63446751-63446770 Msa0614390:intron 30.0%
!! GGTAAGAAATTTTAACCACT+TGG + chr4_2:63446876-63446895 Msa0614390:intron 30.0%
!! CATCCTTTTGCATTGTTATT+TGG - chr4_2:63447039-63447058 None:intergenic 30.0%
TTGTAATCTTAGGAAAGTAG+TGG + chr4_2:63447260-63447279 Msa0614390:intron 30.0%
TGTAATCTTAGGAAAGTAGT+GGG + chr4_2:63447261-63447280 Msa0614390:intron 30.0%
!! GAGTAGTTTCTGTTTTATTG+TGG + chr4_2:63447485-63447504 Msa0614390:intron 30.0%
ATAACATCACAATTCGATCT+TGG - chr4_2:63447518-63447537 None:intergenic 30.0%
!!! GTTATGCATTAGTTTTCGTT+TGG + chr4_2:63447533-63447552 Msa0614390:intron 30.0%
!! TATTGCAGTACACCTTATTT+TGG + chr4_2:63447559-63447578 Msa0614390:intron 30.0%
!!! ATTGCAGTACACCTTATTTT+GGG + chr4_2:63447560-63447579 Msa0614390:intron 30.0%
TAAGTATATGTCATCTTCCA+AGG - chr4_2:63447691-63447710 None:intergenic 30.0%
!!! GTGCTTTGATTTGTTCTTTT+AGG + chr4_2:63447728-63447747 Msa0614390:intron 30.0%
TTTATAATAATGCTGGCCAT+TGG + chr4_2:63447888-63447907 Msa0614390:intron 30.0%
AGTTTCGTAATGCAAACTAA+AGG - chr4_2:63448055-63448074 None:intergenic 30.0%
! ACATGGTTTTCAAATTAGGT+GGG - chr4_2:63448257-63448276 None:intergenic 30.0%
! AACATGGTTTTCAAATTAGG+TGG - chr4_2:63448258-63448277 None:intergenic 30.0%
TGTAACTCTCACATTAAACA+TGG - chr4_2:63448274-63448293 None:intergenic 30.0%
! ATAAGATCTGGAACATAACT+GGG + chr4_2:63448311-63448330 Msa0614390:three_prime_UTR 30.0%
AACTTTGACGGTTAGAATTC+CGG - chr4_2:63444682-63444701 None:intergenic 35.0%
GAATTCTAACCGTCAAAGTT+CGG + chr4_2:63444682-63444701 Msa0614390:CDS 35.0%
AACCACGTTATTCTTTGTTC+CGG - chr4_2:63444888-63444907 None:intergenic 35.0%
TTTGATTGATAAGTCTCCCA+TGG - chr4_2:63445101-63445120 None:intergenic 35.0%
CCTTAAAAAACACATCAGTG+GGG - chr4_2:63445208-63445227 None:intergenic 35.0%
CACCTTAAAAAACACATCAG+TGG - chr4_2:63445210-63445229 None:intergenic 35.0%
!!! GATGTGTTTTTTAAGGTGTG+TGG + chr4_2:63445212-63445231 Msa0614390:intron 35.0%
GAAACGACACAACATTGAAA+CGG - chr4_2:63445407-63445426 None:intergenic 35.0%
! TTTTGTTACAAACCACCCTT+TGG + chr4_2:63445541-63445560 Msa0614390:intron 35.0%
TGTTAAAAGACACCACCAAA+GGG - chr4_2:63445559-63445578 None:intergenic 35.0%
TTGTTAAAAGACACCACCAA+AGG - chr4_2:63445560-63445579 None:intergenic 35.0%
! CACCACTATGCTGAAATTTT+CGG - chr4_2:63446014-63446033 None:intergenic 35.0%
CAAGTTCTACCATAGTCATT+AGG - chr4_2:63446083-63446102 None:intergenic 35.0%
GAAATGGTATGAGAGATTTC+TGG + chr4_2:63446110-63446129 Msa0614390:CDS 35.0%
ACTTTACATACTTTCCCCAA+AGG + chr4_2:63446173-63446192 Msa0614390:CDS 35.0%
TTCCTACACTGAGTATTTGA+AGG + chr4_2:63446239-63446258 Msa0614390:CDS 35.0%
TCTTTCAATTTGGCATCCTT+GGG - chr4_2:63446330-63446349 None:intergenic 35.0%
ATCTTTCAATTTGGCATCCT+TGG - chr4_2:63446331-63446350 None:intergenic 35.0%
ATTGAGATCACAAGTTCAAC+AGG - chr4_2:63446537-63446556 None:intergenic 35.0%
AAGTGCATGAGAGGAAATTA+GGG - chr4_2:63446674-63446693 None:intergenic 35.0%
ACACTACACTTTCGAATTCT+AGG - chr4_2:63446697-63446716 None:intergenic 35.0%
! AGAATTCGAAAGTGTAGTGT+AGG + chr4_2:63446697-63446716 Msa0614390:intron 35.0%
GCTATAATCTTTACAAAGGG+CGG + chr4_2:63446727-63446746 Msa0614390:intron 35.0%
GACAACAAATGTATGCCTTA+TGG - chr4_2:63446769-63446788 None:intergenic 35.0%
!! CTTATATCCAACTTTTAGGG+AGG + chr4_2:63446855-63446874 Msa0614390:intron 35.0%
TTTCTTACCTCCCTAAAAGT+TGG - chr4_2:63446865-63446884 None:intergenic 35.0%
!! AGAAATTTTAACCACTTGGG+AGG + chr4_2:63446880-63446899 Msa0614390:intron 35.0%
!! AAGGGAGTGATATGTCATTT+TGG + chr4_2:63446957-63446976 Msa0614390:intron 35.0%
AATGCAAAAGGATGCTAATG+TGG + chr4_2:63447045-63447064 Msa0614390:intron 35.0%
ATGCAAAAGGATGCTAATGT+GGG + chr4_2:63447046-63447065 Msa0614390:intron 35.0%
GTAATCTTAGGAAAGTAGTG+GGG + chr4_2:63447262-63447281 Msa0614390:intron 35.0%
TAATCTTAGGAAAGTAGTGG+GGG + chr4_2:63447263-63447282 Msa0614390:intron 35.0%
ATCTTCTTAGAATCTGGGTT+TGG - chr4_2:63447325-63447344 None:intergenic 35.0%
ACTGCATCTTCTTAGAATCT+GGG - chr4_2:63447330-63447349 None:intergenic 35.0%
!! ATTTTAAGAGATGTCGTGGA+TGG + chr4_2:63447363-63447382 Msa0614390:intron 35.0%
!! TTTTAAGAGATGTCGTGGAT+GGG + chr4_2:63447364-63447383 Msa0614390:intron 35.0%
!!! GTACACCTTATTTTGGGTAT+TGG + chr4_2:63447566-63447585 Msa0614390:intron 35.0%
GAGATCCAATACCCAAAATA+AGG - chr4_2:63447574-63447593 None:intergenic 35.0%
GATAACCAACATGCTAAATC+AGG - chr4_2:63447837-63447856 None:intergenic 35.0%
GCATCCCTTAAAATAGAAAG+AGG + chr4_2:63448080-63448099 Msa0614390:three_prime_UTR 35.0%
ACTGTTCTCTTGATAAGATC+TGG + chr4_2:63448299-63448318 Msa0614390:three_prime_UTR 35.0%
! GATAAGATCTGGAACATAAC+TGG + chr4_2:63448310-63448329 Msa0614390:three_prime_UTR 35.0%
AAAAAGGTAAAGATACCCTG+AGG + chr4_2:63448373-63448392 Msa0614390:three_prime_UTR 35.0%
TTCCGGAACAAAGAATAACG+TGG + chr4_2:63444883-63444902 Msa0614390:CDS 40.0%
CCATCCTCTCTCATAATCTT+CGG - chr4_2:63444938-63444957 None:intergenic 40.0%
! TTCGTTGTTGATTGTAGCCA+TGG + chr4_2:63445081-63445100 Msa0614390:intron 40.0%
! TCGTTGTTGATTGTAGCCAT+GGG + chr4_2:63445082-63445101 Msa0614390:intron 40.0%
! TCATGTGCCGAAGAATTTTC+TGG + chr4_2:63445145-63445164 Msa0614390:CDS 40.0%
TTCTGGATAAAGTCGCTTAC+AGG + chr4_2:63445162-63445181 Msa0614390:CDS 40.0%
!!! CCCCACTGATGTGTTTTTTA+AGG + chr4_2:63445205-63445224 Msa0614390:CDS 40.0%
TTGAATGCAATCACATGCGT+CGG - chr4_2:63445345-63445364 None:intergenic 40.0%
!! GTCGTTTCTAGTGTTCATGT+TGG + chr4_2:63445419-63445438 Msa0614390:intron 40.0%
! GAAATTTTCGGAGTGACTTG+AGG - chr4_2:63446002-63446021 None:intergenic 40.0%
CTCCGAAAATTTCAGCATAG+TGG + chr4_2:63446009-63446028 Msa0614390:CDS 40.0%
CGAAAATTTCAGCATAGTGG+TGG + chr4_2:63446012-63446031 Msa0614390:CDS 40.0%
AATTTCAGCATAGTGGTGGT+TGG + chr4_2:63446016-63446035 Msa0614390:CDS 40.0%
ATTTCAGCATAGTGGTGGTT+GGG + chr4_2:63446017-63446036 Msa0614390:CDS 40.0%
TTGAAGAAGCAGAGAATGAG+AGG + chr4_2:63446052-63446071 Msa0614390:CDS 40.0%
TAGAACTTGTGAAGCCGAAA+TGG + chr4_2:63446094-63446113 Msa0614390:CDS 40.0%
!! ATTTCTGGTTCTTGCTGTAC+AGG + chr4_2:63446125-63446144 Msa0614390:intron 40.0%
!! TTTCTGGTTCTTGCTGTACA+GGG + chr4_2:63446126-63446145 Msa0614390:intron 40.0%
TTACATACTTTCCCCAAAGG+TGG + chr4_2:63446176-63446195 Msa0614390:CDS 40.0%
GTCCTTCAAATACTCAGTGT+AGG - chr4_2:63446244-63446263 None:intergenic 40.0%
CAATAGTCTATTGCAATGGC+AGG - chr4_2:63446300-63446319 None:intergenic 40.0%
CTGCCATTGCAATAGACTAT+TGG + chr4_2:63446298-63446317 Msa0614390:CDS 40.0%
CCTCCAATAGTCTATTGCAA+TGG - chr4_2:63446304-63446323 None:intergenic 40.0%
CCATTGCAATAGACTATTGG+AGG + chr4_2:63446301-63446320 Msa0614390:CDS 40.0%
AATTAGGGGAAAATGCGATC+TGG - chr4_2:63446659-63446678 None:intergenic 40.0%
AGTGCATGAGAGGAAATTAG+GGG - chr4_2:63446673-63446692 None:intergenic 40.0%
GAAGTGCATGAGAGGAAATT+AGG - chr4_2:63446675-63446694 None:intergenic 40.0%
! AATTCTAGGAAGTGCATGAG+AGG - chr4_2:63446683-63446702 None:intergenic 40.0%
!!! TGTCATTTTGGAGTGATCCA+TGG + chr4_2:63446969-63446988 Msa0614390:intron 40.0%
!!! GTCATTTTGGAGTGATCCAT+GGG + chr4_2:63446970-63446989 Msa0614390:intron 40.0%
TGCAAAAGGATGCTAATGTG+GGG + chr4_2:63447047-63447066 Msa0614390:intron 40.0%
GAGAAAGTCAATCCATTGGA+AGG + chr4_2:63447120-63447139 Msa0614390:intron 40.0%
ATCAACCGTGAGAACTTCAA+GGG + chr4_2:63447170-63447189 Msa0614390:intron 40.0%
! GCTGGTTCTCTTGTAATCTT+AGG + chr4_2:63447250-63447269 Msa0614390:intron 40.0%
TAGAATCTGGGTTTGGACTT+TGG - chr4_2:63447318-63447337 None:intergenic 40.0%
CACTGCATCTTCTTAGAATC+TGG - chr4_2:63447331-63447350 None:intergenic 40.0%
TTTAAGAGATGTCGTGGATG+GGG + chr4_2:63447365-63447384 Msa0614390:intron 40.0%
CACTGATATCGGCATCAAAT+TGG - chr4_2:63447451-63447470 None:intergenic 40.0%
CAATTTGATGCCGATATCAG+TGG + chr4_2:63447449-63447468 Msa0614390:intron 40.0%
!! TTTGGGTATTGGATCTCGTT+TGG + chr4_2:63447577-63447596 Msa0614390:intron 40.0%
GTATATGTCATCTTCCAAGG+TGG - chr4_2:63447688-63447707 None:intergenic 40.0%
AACCAACATGCTAAATCAGG+TGG - chr4_2:63447834-63447853 None:intergenic 40.0%
ACAATTCCGTTCTTTCATGC+AGG + chr4_2:63447941-63447960 Msa0614390:intron 40.0%
GGATATCCTGCATGAAAGAA+CGG - chr4_2:63447950-63447969 None:intergenic 40.0%
TAATGATAACCAAGAGGAGC+TGG - chr4_2:63448002-63448021 None:intergenic 40.0%
AGCTCCTCTTGGTTATCATT+AGG + chr4_2:63448001-63448020 Msa0614390:CDS 40.0%
GCTCCTCTTGGTTATCATTA+GGG + chr4_2:63448002-63448021 Msa0614390:CDS 40.0%
AAGCCCTAATGATAACCAAG+AGG - chr4_2:63448008-63448027 None:intergenic 40.0%
GCATTCAGCATTGTGTTACG+TGG + chr4_2:63444634-63444653 Msa0614390:CDS 45.0%
TTCTAACCGTCAAAGTTCGG+CGG + chr4_2:63444685-63444704 Msa0614390:CDS 45.0%
! GAAACGGAGGGTTCTTTTAC+TGG + chr4_2:63444765-63444784 Msa0614390:intron 45.0%
! GAGGGTTCTTTTACTGGAAG+AGG + chr4_2:63444771-63444790 Msa0614390:intron 45.0%
ACGTGGTTGTGTCGAGTTAT+TGG + chr4_2:63444900-63444919 Msa0614390:CDS 45.0%
CGTGGTTGTGTCGAGTTATT+GGG + chr4_2:63444901-63444920 Msa0614390:CDS 45.0%
GTGGTTGTGTCGAGTTATTG+GGG + chr4_2:63444902-63444921 Msa0614390:CDS 45.0%
TGGTTGTGTCGAGTTATTGG+GGG + chr4_2:63444903-63444922 Msa0614390:CDS 45.0%
CCGAAGATTATGAGAGAGGA+TGG + chr4_2:63444935-63444954 Msa0614390:CDS 45.0%
GTTACCATGAAGCAGTTCCA+AGG - chr4_2:63444971-63444990 None:intergenic 45.0%
TGAAACGGACACAATGACAC+AGG - chr4_2:63445392-63445411 None:intergenic 45.0%
TGTTACAAACCACCCTTTGG+TGG + chr4_2:63445544-63445563 Msa0614390:intron 45.0%
TAAAAGACACCACCAAAGGG+TGG - chr4_2:63445556-63445575 None:intergenic 45.0%
CTGTTTCGAGCATCATTGCA+CGG - chr4_2:63445939-63445958 None:intergenic 45.0%
GAGGATGCACCTAATGACTA+TGG + chr4_2:63446071-63446090 Msa0614390:CDS 45.0%
AACTCTATGAGCCACCTTTG+GGG - chr4_2:63446190-63446209 None:intergenic 45.0%
CAACTCTATGAGCCACCTTT+GGG - chr4_2:63446191-63446210 None:intergenic 45.0%
ACAACTCTATGAGCCACCTT+TGG - chr4_2:63446192-63446211 None:intergenic 45.0%
AAGGTGGCTCATAGAGTTGT+TGG + chr4_2:63446192-63446211 Msa0614390:CDS 45.0%
AGGTGGCTCATAGAGTTGTT+GGG + chr4_2:63446193-63446212 Msa0614390:CDS 45.0%
! CTGGTTCTCTAGTAAGTGCA+GGG + chr4_2:63446922-63446941 Msa0614390:intron 45.0%
TAGTAAGTGCAGGGAAGTAG+TGG + chr4_2:63446931-63446950 Msa0614390:intron 45.0%
AGTAAGTGCAGGGAAGTAGT+GGG + chr4_2:63446932-63446951 Msa0614390:intron 45.0%
!!! TTTTGGAGTGATCCATGGGT+AGG + chr4_2:63446974-63446993 Msa0614390:intron 45.0%
! TTTGGAGTGATCCATGGGTA+GGG + chr4_2:63446975-63446994 Msa0614390:intron 45.0%
GCAAAAGGATGCTAATGTGG+GGG + chr4_2:63447048-63447067 Msa0614390:intron 45.0%
GTGTGGAACAAGTTCAGAGA+GGG + chr4_2:63447075-63447094 Msa0614390:intron 45.0%
TGTGGAACAAGTTCAGAGAG+GGG + chr4_2:63447076-63447095 Msa0614390:intron 45.0%
GGAGGAGAAAGTCAATCCAT+TGG + chr4_2:63447116-63447135 Msa0614390:intron 45.0%
GTCAATCCATTGGAAGGAGT+TGG + chr4_2:63447126-63447145 Msa0614390:intron 45.0%
CATTCACCAACTCCTTCCAA+TGG - chr4_2:63447135-63447154 None:intergenic 45.0%
GATCAACCGTGAGAACTTCA+AGG + chr4_2:63447169-63447188 Msa0614390:intron 45.0%
TCAACCGTGAGAACTTCAAG+GGG + chr4_2:63447171-63447190 Msa0614390:intron 45.0%
AGTACCCCTTGAAGTTCTCA+CGG - chr4_2:63447178-63447197 None:intergenic 45.0%
!! AGGGGTACTCAACAGACAAA+TGG + chr4_2:63447189-63447208 Msa0614390:intron 45.0%
! GGGGTACTCAACAGACAAAT+GGG + chr4_2:63447190-63447209 Msa0614390:intron 45.0%
ACTCAACAGACAAATGGGTC+TGG + chr4_2:63447195-63447214 Msa0614390:intron 45.0%
AGGAGGAGAATTAAACGAGC+TGG + chr4_2:63447232-63447251 Msa0614390:intron 45.0%
! AGGGGACTGATACGTTGTTT+TGG + chr4_2:63447286-63447305 Msa0614390:intron 45.0%
CCAGAAACAGCCACTGATAT+CGG - chr4_2:63447462-63447481 None:intergenic 45.0%
!! ATATCAGTGGCTGTTTCTGG+AGG + chr4_2:63447462-63447481 Msa0614390:intron 45.0%
!! TATCAGTGGCTGTTTCTGGA+GGG + chr4_2:63447463-63447482 Msa0614390:intron 45.0%
GAACACCAGTGTGAAACCAA+TGG - chr4_2:63447907-63447926 None:intergenic 45.0%
ATGCAGGATATCCACTTCCA+CGG + chr4_2:63447957-63447976 Msa0614390:intron 45.0%
ACTTCCACGGTAAAGAACTG+CGG + chr4_2:63447970-63447989 Msa0614390:CDS 45.0%
! TCTGGAACATAACTGGGTGA+AGG + chr4_2:63448317-63448336 Msa0614390:three_prime_UTR 45.0%
CTGGAACATAACTGGGTGAA+GGG + chr4_2:63448318-63448337 Msa0614390:three_prime_UTR 45.0%
TGGAACATAACTGGGTGAAG+GGG + chr4_2:63448319-63448338 Msa0614390:three_prime_UTR 45.0%
TCACAACCGCCGAACTTTGA+CGG - chr4_2:63444694-63444713 None:intergenic 50.0%
GACGGAGAAGAACGAGAAGA+AGG + chr4_2:63444853-63444872 Msa0614390:CDS 50.0%
GGAGAAGAACGAGAAGAAGG+AGG + chr4_2:63444856-63444875 Msa0614390:CDS 50.0%
GAGAAGAAGGAGGAGAGTTC+CGG + chr4_2:63444866-63444885 Msa0614390:CDS 50.0%
CGAGTTATTGGGGGATTTCG+AGG + chr4_2:63444912-63444931 Msa0614390:CDS 50.0%
GAGGCCGAAGATTATGAGAG+AGG + chr4_2:63444931-63444950 Msa0614390:CDS 50.0%
TGAGAGAGGATGGAACAGAG+TGG + chr4_2:63444945-63444964 Msa0614390:CDS 50.0%
TAAGTGTTCTCTGTCGCACG+AGG + chr4_2:63445301-63445320 Msa0614390:intron 50.0%
! CAATCACATGCGTCGGTGTA+AGG - chr4_2:63445338-63445357 None:intergenic 50.0%
TCTATTGCAATGGCAGGAGC+AGG - chr4_2:63446294-63446313 None:intergenic 50.0%
AGACTATTGGAGGCTTCCCA+AGG + chr4_2:63446311-63446330 Msa0614390:CDS 50.0%
! AACAGTCATTCGCGCTGATG+AGG + chr4_2:63446356-63446375 Msa0614390:CDS 50.0%
GAACACTCACTGAAGCGAAG+TGG - chr4_2:63446401-63446420 None:intergenic 50.0%
TTTAACCACTTGGGAGGACG+AGG + chr4_2:63446886-63446905 Msa0614390:intron 50.0%
ACGAGGAGAGTCAAACAAGC+TGG + chr4_2:63446903-63446922 Msa0614390:intron 50.0%
! GCTGGTTCTCTAGTAAGTGC+AGG + chr4_2:63446921-63446940 Msa0614390:intron 50.0%
GTAAGTGCAGGGAAGTAGTG+GGG + chr4_2:63446933-63446952 Msa0614390:intron 50.0%
TAAGTGCAGGGAAGTAGTGG+GGG + chr4_2:63446934-63446953 Msa0614390:intron 50.0%
AAAGGATGCTAATGTGGGGG+AGG + chr4_2:63447051-63447070 Msa0614390:intron 50.0%
CGTGTGGAACAAGTTCAGAG+AGG + chr4_2:63447074-63447093 Msa0614390:intron 50.0%
ACAAGTTCAGAGAGGGGTGA+AGG + chr4_2:63447082-63447101 Msa0614390:intron 50.0%
AGAGAGGGGTGAAGGAAAGT+GGG + chr4_2:63447090-63447109 Msa0614390:intron 50.0%
GTGAAGGAAAGTGGGATTGG+AGG + chr4_2:63447098-63447117 Msa0614390:intron 50.0%
! TCTTAGGAAAGTAGTGGGGG+AGG + chr4_2:63447266-63447285 Msa0614390:intron 50.0%
! CTTAGGAAAGTAGTGGGGGA+GGG + chr4_2:63447267-63447286 Msa0614390:intron 50.0%
! TTAGGAAAGTAGTGGGGGAG+GGG + chr4_2:63447268-63447287 Msa0614390:intron 50.0%
GATGTCGTGGATGGGGTTTA+TGG + chr4_2:63447372-63447391 Msa0614390:intron 50.0%
CGTGGATGGGGTTTATGGAA+TGG + chr4_2:63447377-63447396 Msa0614390:intron 50.0%
! CCGATATCAGTGGCTGTTTC+TGG + chr4_2:63447459-63447478 Msa0614390:intron 50.0%
!! GGGTATTGGATCTCGTTTGG+AGG + chr4_2:63447580-63447599 Msa0614390:intron 50.0%
GGCCACCTGATTTAGCATGT+TGG + chr4_2:63447829-63447848 Msa0614390:intron 50.0%
GCAGTTCTTTACCGTGGAAG+TGG - chr4_2:63447971-63447990 None:intergenic 50.0%
CTTCCACGGTAAAGAACTGC+GGG + chr4_2:63447971-63447990 Msa0614390:CDS 50.0%
GTCAAAGTTCGGCGGTTGTG+AGG + chr4_2:63444693-63444712 Msa0614390:CDS 55.0%
AGAGACGGAGGCGAAATCGA+CGG + chr4_2:63444835-63444854 Msa0614390:CDS 55.0%
AGGATGGAACAGAGTGGCCT+TGG + chr4_2:63444951-63444970 Msa0614390:CDS 55.0%
! GTGGCCTTGGAACTGCTTCA+TGG + chr4_2:63444964-63444983 Msa0614390:CDS 55.0%
GAAACAGTTGCAGCTGTCCC+TGG + chr4_2:63445952-63445971 Msa0614390:CDS 55.0%
AGTTGCAGCTGTCCCTGGAA+TGG + chr4_2:63445957-63445976 Msa0614390:CDS 55.0%
CTGTCCCTGGAATGGTTGGA+GGG + chr4_2:63445965-63445984 Msa0614390:CDS 55.0%
GCATCCCTCCAACCATTCCA+GGG - chr4_2:63445972-63445991 None:intergenic 55.0%
AGCATCCCTCCAACCATTCC+AGG - chr4_2:63445973-63445992 None:intergenic 55.0%
CGAAGTGGTTCACATCCCGA+TGG - chr4_2:63446386-63446405 None:intergenic 55.0%
AGTGATCCATGGGTAGGGCA+AGG + chr4_2:63446980-63446999 Msa0614390:intron 55.0%
GTGATCCATGGGTAGGGCAA+GGG + chr4_2:63446981-63447000 Msa0614390:intron 55.0%
TGATCCATGGGTAGGGCAAG+GGG + chr4_2:63446982-63447001 Msa0614390:intron 55.0%
CAGAGAGGGGTGAAGGAAAG+TGG + chr4_2:63447089-63447108 Msa0614390:intron 55.0%
GGGGTGAAGGAAAGTGGGAT+TGG + chr4_2:63447095-63447114 Msa0614390:intron 55.0%
CAGACAAATGGGTCTGGCTG+CGG + chr4_2:63447201-63447220 Msa0614390:intron 55.0%
AGACAAATGGGTCTGGCTGC+GGG + chr4_2:63447202-63447221 Msa0614390:intron 55.0%
!! GCTGGCCATTGGTTTCACAC+TGG + chr4_2:63447899-63447918 Msa0614390:intron 55.0%
! GTGGCTCGCCGAGCTTTGAT+CGG + chr4_2:63444653-63444672 Msa0614390:CDS 60.0%
TCCGGCCACCGATCAAAGCT+CGG - chr4_2:63444664-63444683 None:intergenic 60.0%
GGCGGTTGTGAGGTCATTCG+CGG + chr4_2:63444703-63444722 Msa0614390:CDS 60.0%
GGTTGTGAGGTCATTCGCGG+CGG + chr4_2:63444706-63444725 Msa0614390:CDS 60.0%
TCATTCGCGGCGGCGGAAAT+CGG + chr4_2:63444716-63444735 Msa0614390:CDS 60.0%
CATCGGCGTAGAGATGCCTC+TGG - chr4_2:63444742-63444761 None:intergenic 60.0%
!! CAGAGGCATCTCTACGCCGA+TGG + chr4_2:63444740-63444759 Msa0614390:CDS 60.0%
AGGCATCTCTACGCCGATGG+CGG + chr4_2:63444743-63444762 Msa0614390:CDS 60.0%
!! CTCTACGCCGATGGCGGAAA+CGG + chr4_2:63444749-63444768 Msa0614390:CDS 60.0%
GAACCCTCCGTTTCCGCCAT+CGG - chr4_2:63444759-63444778 None:intergenic 60.0%
TCTTCCGCTGACGGCTTCGA+CGG - chr4_2:63444818-63444837 None:intergenic 60.0%
GAAGCCGTCAGCGGAAGAGA+CGG + chr4_2:63444820-63444839 Msa0614390:CDS 60.0%
TCTGTCGCACGAGGCGTGTA+TGG + chr4_2:63445310-63445329 Msa0614390:intron 60.0%
GCAGCTGTCCCTGGAATGGT+TGG + chr4_2:63445961-63445980 Msa0614390:CDS 60.0%
GCTGTCCCTGGAATGGTTGG+AGG + chr4_2:63445964-63445983 Msa0614390:CDS 60.0%
! GCGCTGATGAGGCTCACCAT+CGG + chr4_2:63446367-63446386 Msa0614390:CDS 60.0%
CGCTGATGAGGCTCACCATC+GGG + chr4_2:63446368-63446387 Msa0614390:CDS 60.0%
ACTCTCCTCGTCCTCCCAAG+TGG - chr4_2:63446894-63446913 None:intergenic 60.0%
! TGCAGGGAAGTAGTGGGGGA+AGG + chr4_2:63446938-63446957 Msa0614390:intron 60.0%
! GCAGGGAAGTAGTGGGGGAA+GGG + chr4_2:63446939-63446958 Msa0614390:intron 60.0%
ATCTCCCCTTGCCCTACCCA+TGG - chr4_2:63446989-63447008 None:intergenic 60.0%
CGTCCCGCAGTTCTTTACCG+TGG - chr4_2:63447977-63447996 None:intergenic 60.0%
! GCTCGCCGAGCTTTGATCGG+TGG + chr4_2:63444656-63444675 Msa0614390:CDS 65.0%
! GCCGAGCTTTGATCGGTGGC+CGG + chr4_2:63444660-63444679 Msa0614390:CDS 65.0%
TGTGAGGTCATTCGCGGCGG+CGG + chr4_2:63444709-63444728 Msa0614390:CDS 65.0%
!! TACGCCGATGGCGGAAACGG+AGG + chr4_2:63444752-63444771 Msa0614390:CDS 65.0%
!! ACGCCGATGGCGGAAACGGA+GGG + chr4_2:63444753-63444772 Msa0614390:CDS 65.0%
GCCTCCGTCTCTTCCGCTGA+CGG - chr4_2:63444827-63444846 None:intergenic 65.0%
! GCTAATGTGGGGGAGGCGTG+TGG + chr4_2:63447058-63447077 Msa0614390:intron 65.0%
ATGGGTCTGGCTGCGGGTGA+AGG + chr4_2:63447208-63447227 Msa0614390:intron 65.0%
TGGGTCTGGCTGCGGGTGAA+GGG + chr4_2:63447209-63447228 Msa0614390:intron 65.0%
TGCGCCGTCGAAGCCGTCAG+CGG + chr4_2:63444811-63444830 Msa0614390:CDS 70.0%
GCCGTCAGCGGAAGAGACGG+AGG + chr4_2:63444823-63444842 Msa0614390:CDS 70.0%
GTCTGGCTGCGGGTGAAGGG+AGG + chr4_2:63447212-63447231 Msa0614390:intron 70.0%
TGGCTGCGGGTGAAGGGAGG+AGG + chr4_2:63447215-63447234 Msa0614390:intron 70.0%
CGGGACGCACCAGCTCCTCT+TGG + chr4_2:63447990-63448009 Msa0614390:CDS 70.0%
CGGCGGCGGAAATCGGCCAG+AGG + chr4_2:63444723-63444742 Msa0614390:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 63444629 63448396 63444629 ID=Msa0614390;Name=Msa0614390
chr4_2 mRNA 63444629 63448396 63444629 ID=Msa0614390-mRNA-1;Parent=Msa0614390;Name=Msa0614390-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.4|0.33|1|0.4|0.33|6|374|327
chr4_2 exon 63444629 63444774 63444629 ID=Msa0614390-mRNA-1:exon:17651;Parent=Msa0614390-mRNA-1
chr4_2 exon 63444793 63444985 63444793 ID=Msa0614390-mRNA-1:exon:17652;Parent=Msa0614390-mRNA-1
chr4_2 exon 63445098 63445226 63445098 ID=Msa0614390-mRNA-1:exon:17653;Parent=Msa0614390-mRNA-1
chr4_2 exon 63445922 63446131 63445922 ID=Msa0614390-mRNA-1:exon:17654;Parent=Msa0614390-mRNA-1
chr4_2 exon 63446147 63446392 63446147 ID=Msa0614390-mRNA-1:exon:17655;Parent=Msa0614390-mRNA-1
chr4_2 exon 63447963 63448396 63447963 ID=Msa0614390-mRNA-1:exon:17656;Parent=Msa0614390-mRNA-1
chr4_2 CDS 63444629 63444774 63444629 ID=Msa0614390-mRNA-1:cds;Parent=Msa0614390-mRNA-1
chr4_2 CDS 63444793 63444985 63444793 ID=Msa0614390-mRNA-1:cds;Parent=Msa0614390-mRNA-1
chr4_2 CDS 63445098 63445226 63445098 ID=Msa0614390-mRNA-1:cds;Parent=Msa0614390-mRNA-1
chr4_2 CDS 63445922 63446131 63445922 ID=Msa0614390-mRNA-1:cds;Parent=Msa0614390-mRNA-1
chr4_2 CDS 63446147 63446392 63446147 ID=Msa0614390-mRNA-1:cds;Parent=Msa0614390-mRNA-1
chr4_2 CDS 63447963 63448022 63447963 ID=Msa0614390-mRNA-1:cds;Parent=Msa0614390-mRNA-1
chr4_2 three_prime_UTR 63448023 63448396 63448023 ID=Msa0614390-mRNA-1:three_prime_utr;Parent=Msa0614390-mRNA-1
Gene Sequence

>Msa0614390

ATGAAGCATTCAGCATTGTGTTACGTGGCTCGCCGAGCTTTGATCGGTGGCCGGAATTCTAACCGTCAAAGTTCGGCGGTTGTGAGGTCATTCGCGGCGGCGGAAATCGGCCAGAGGCATCTCTACGCCGATGGCGGAAACGGAGGGATGATGTCTTCGCAAGCTGCGCCGTCGAAGCCGTCAGCGGAAGAGACGGAGGCGAAATCGACGGAGAAGAACGAGAAGAAGGAGGAGAGTTCCGGAACAAAGAATAACGTGGTTGTGTCGAGTTATTGGGGGATTTCGAGGCCGAAGATTATGAGAGAGGATGGAACAGAGTGGCCTTGGAACTGCTTCATGCCATGGGAGACTTATCAATCAAACGTTTCCATTGATCTGAATAAGCATCATGTGCCGAAGAATTTTCTGGATAAAGTCGCTTACAGGACAGTGAAGCTTCTCAGAATCCCCACTGATGTGTTTTTTAAGAGACGTTATGGTTGCCGTGCAATGATGCTCGAAACAGTTGCAGCTGTCCCTGGAATGGTTGGAGGGATGCTGTTGCACCTCAAGTCACTCCGAAAATTTCAGCATAGTGGTGGTTGGGTCAAAGCATTGCTTGAAGAAGCAGAGAATGAGAGGATGCACCTAATGACTATGGTAGAACTTGTGAAGCCGAAATGGTATGAGAGATTTCTGGGAGTTTTCTTCAATGCATTCTTTGTACTTTACATACTTTCCCCAAAGGTGGCTCATAGAGTTGTTGGGTACCTTGAAGAAGAAGCTATACATTCCTACACTGAGTATTTGAAGGACATTGATAGTGGTGCAATTGAAAATGTTCCTGCTCCTGCCATTGCAATAGACTATTGGAGGCTTCCCAAGGATGCCAAATTGAAAGATGTCATAACAGTCATTCGCGCTGATGAGGCTCACCATCGGGATGATATCCACTTCCACGGTAAAGAACTGCGGGACGCACCAGCTCCTCTTGGTTATCATTAG

Protein sequence

>Msa0614390

MKHSALCYVARRALIGGRNSNRQSSAVVRSFAAAEIGQRHLYADGGNGGMMSSQAAPSKPSAEETEAKSTEKNEKKEESSGTKNNVVVSSYWGISRPKIMREDGTEWPWNCFMPWETYQSNVSIDLNKHHVPKNFLDKVAYRTVKLLRIPTDVFFKRRYGCRAMMLETVAAVPGMVGGMLLHLKSLRKFQHSGGWVKALLEEAENERMHLMTMVELVKPKWYERFLGVFFNAFFVLYILSPKVAHRVVGYLEEEAIHSYTEYLKDIDSGAIENVPAPAIAIDYWRLPKDAKLKDVITVIRADEAHHRDDIHFHGKELRDAPAPLGYH*