AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0754840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0754840 MtrunA17_Chr5g0399661 92.111 431 12 1 263 671 1 431 0.0 810
Msa0754840 MtrunA17_Chr5g0399661 81.818 264 27 5 1 249 3 260 8.86e-141 418
Msa0754840 MtrunA17_Chr5g0399671 82.809 413 42 5 265 648 1 413 0.0 672
Msa0754840 MtrunA17_Chr5g0399671 89.015 264 14 1 1 249 1 264 3.89e-159 464
Msa0754840 MtrunA17_Chr1g0211181 39.848 394 205 5 300 664 8 398 6.31e-87 278
Msa0754840 MtrunA17_Chr1g0211181 40.851 235 121 4 43 261 9 241 7.11e-49 176
Msa0754840 MtrunA17_Chr1g0211141 38.579 394 209 5 301 664 2 392 1.29e-74 245
Msa0754840 MtrunA17_Chr1g0211141 41.553 219 111 3 43 245 2 219 1.57e-41 155
Msa0754840 MtrunA17_Chr1g0197161 38.500 400 209 6 299 664 4 400 6.85e-73 241
Msa0754840 MtrunA17_Chr1g0197161 34.641 306 172 6 41 319 4 308 2.91e-40 152
Msa0754840 MtrunA17_Chr1g0211171 37.688 398 208 5 304 664 9 403 4.39e-72 239
Msa0754840 MtrunA17_Chr1g0211171 41.553 219 108 4 46 245 9 226 1.80e-38 147
Msa0754840 MtrunA17_Chr1g0211151 36.957 368 197 5 298 631 3 369 3.40e-60 207
Msa0754840 MtrunA17_Chr1g0211151 38.462 221 118 4 41 244 4 223 3.53e-33 132
Msa0754840 MtrunA17_Chr4g0017991 42.424 132 73 2 300 428 5 136 4.85e-24 100
Msa0754840 MtrunA17_Chr4g0017991 35.385 130 49 2 43 157 6 115 1.72e-14 72.4
Msa0754840 MtrunA17_Chr4g0018001 27.143 210 143 3 441 640 2 211 1.18e-21 94.7
Msa0754840 MtrunA17_Chr8g0375081 26.016 369 216 13 296 619 75 431 1.26e-21 99.8
Msa0754840 MtrunA17_Chr4g0010391 29.231 260 169 9 379 633 166 415 3.67e-21 97.1
Msa0754840 MtrunA17_Chr5g0402211 25.833 360 212 14 304 619 78 426 3.75e-19 92.0
Msa0754840 MtrunA17_Chr4g0017951 52.632 76 35 1 296 371 2 76 4.58e-19 82.0
Msa0754840 MtrunA17_Chr4g0017951 45.070 71 24 1 43 98 6 76 8.31e-11 58.5
Msa0754840 MtrunA17_Chr4g0017981 30.328 122 79 1 519 634 4 125 3.37e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0754840 AT2G35660.1 69.898 392 96 1 300 669 43 434 0.0 577
Msa0754840 AT2G35660.1 61.024 254 83 2 11 249 13 265 1.88e-98 309
Msa0754840 AT2G35660.2 73.000 300 81 0 370 669 21 320 1.21e-165 478
Msa0754840 AT2G35660.2 70.199 151 45 0 99 249 1 151 4.64e-71 234
Msa0754840 AT2G35660.3 73.000 300 81 0 370 669 21 320 1.21e-165 478
Msa0754840 AT2G35660.3 70.199 151 45 0 99 249 1 151 4.64e-71 234
Msa0754840 AT2G29720.1 62.745 357 111 1 314 648 55 411 2.41e-164 478
Msa0754840 AT2G29720.1 61.628 258 81 3 8 249 8 263 2.98e-94 298
Msa0754840 AT5G05320.1 34.160 363 202 5 302 630 7 366 3.93e-69 231
Msa0754840 AT5G05320.1 35.371 229 130 4 44 256 7 233 7.80e-40 151
Msa0754840 AT4G38540.1 32.918 401 230 5 304 669 9 405 5.20e-65 220
Msa0754840 AT4G38540.1 34.956 226 129 4 46 255 9 232 1.19e-32 130
Msa0754840 AT4G15760.1 31.198 359 203 9 312 634 39 389 6.79e-45 166
Msa0754840 AT4G15760.1 29.545 220 134 4 54 256 39 254 4.59e-22 99.8
Msa0754840 AT4G15760.2 30.458 371 202 10 312 634 39 401 2.73e-43 162
Msa0754840 AT4G15760.2 28.947 228 137 4 54 256 39 266 6.07e-22 99.8
Msa0754840 AT4G15765.1 28.169 284 176 5 299 575 1 263 5.12e-26 108
Msa0754840 AT4G15765.1 29.817 218 127 5 46 261 6 199 1.19e-20 92.8
Msa0754840 AT5G67030.1 26.331 338 195 13 300 596 79 403 1.79e-21 99.8
Msa0754840 AT5G67030.2 26.844 339 192 14 300 596 79 403 2.13e-21 99.4

Find 217 sgRNAs with CRISPR-Local

Find 589 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAGCCTTGATTGTTAATT+TGG 0.116957 5_2:+8545970 None:intergenic
ATGTCTCAACAGATTGTAAT+AGG 0.209668 5_2:-8544237 Msa0754840:intron
GGATACCTTATTGGAATTCT+TGG 0.212200 5_2:-8539833 Msa0754840:CDS
GGATACCTTCTTGGAATTCT+TGG 0.225203 5_2:-8544555 Msa0754840:CDS
AGATTGAGCCTTGATTAATT+TGG 0.234422 5_2:+8540885 None:intergenic
ATGTCTAAACAGATTGTAAT+AGG 0.240740 5_2:-8539522 Msa0754840:intron
CGATTACAACATGTTCCTTT+TGG 0.248040 5_2:+8540857 None:intergenic
AGAAATACCATGACCATTAT+AGG 0.249032 5_2:-8538551 Msa0754840:three_prime_UTR
TCCAAATGGGGATACCTTAT+TGG 0.254372 5_2:-8539842 Msa0754840:CDS
TACACTTTGGTTGGAGAAAC+AGG 0.298074 5_2:+8544051 None:intergenic
TGCCCAAGATTTGGAGTCAT+TGG 0.307226 5_2:+8538999 None:intergenic
CATGCTCCTTGCCCAAGATT+TGG 0.307845 5_2:+8538990 None:intergenic
TTCATTATGTTTAGTAGCTC+TGG 0.317013 5_2:+8539137 None:intergenic
TGAATATTGTGTATATATTC+AGG 0.322784 5_2:+8538586 None:intergenic
TAGACTTTGGTTGGAGAAAC+AGG 0.332821 5_2:+8539336 None:intergenic
TTGCCTTGTCGTACCAGAAT+TGG 0.332839 5_2:-8546007 Msa0754840:CDS
CAATTCAGTTTGTGTTTGAT+AGG 0.339791 5_2:+8546087 None:intergenic
TCCAAATGGGGATACCTTCT+TGG 0.343769 5_2:-8544564 Msa0754840:CDS
AGTGGAGAGGAGGGTACTTT+TGG 0.353165 5_2:-8539935 Msa0754840:CDS
AGTGGAGAGGAGGGTACTTT+TGG 0.353165 5_2:-8544657 Msa0754840:CDS
CACCCAATGACTCCAAATCT+TGG 0.354503 5_2:-8539002 Msa0754840:CDS
CCAACTTGTCATACCAGAAT+TGG 0.356587 5_2:-8540922 Msa0754840:CDS
TCCAATAAGGTATCCCCATT+TGG 0.359215 5_2:+8539841 None:intergenic
CCACAGGTGAATTACATCTA+TGG 0.363265 5_2:-8544099 Msa0754840:CDS
ATCGTGGGTGGTGGCATTGC+AGG 0.363319 5_2:-8540838 Msa0754840:CDS
TCTCCACTGCACGCACCTCT+TGG 0.364886 5_2:+8539950 None:intergenic
TCTCCACTGCACGCACCTCT+TGG 0.364886 5_2:+8544672 None:intergenic
ATATCGTAGGGATCCAATTC+TGG 0.369127 5_2:+8545994 None:intergenic
GTGAATTACATCTATGGAAA+AGG 0.372345 5_2:-8544093 Msa0754840:CDS
GCCCAAGATTTGGAGTCATT+GGG 0.380043 5_2:+8539000 None:intergenic
TTGTTGTGATTTCAAGAGTT+GGG 0.381370 5_2:-8538660 Msa0754840:three_prime_UTR
CCCATCCAAGAATTCCAATA+AGG 0.383303 5_2:+8539828 None:intergenic
CTAAGGATCTAGTGGAAAAC+TGG 0.384760 5_2:-8539163 Msa0754840:CDS
GTGAATTACATCTACGGAAA+AGG 0.386225 5_2:-8539378 Msa0754840:CDS
CGATTACAACATGTTCCTTT+CGG 0.387738 5_2:+8545936 None:intergenic
ACTTCTGAGAGCTCCAATTC+TGG 0.395076 5_2:+8540909 None:intergenic
ATTAAGTTTATATCCTATAA+TGG 0.396976 5_2:+8538538 None:intergenic
TCCAAGAAGGTATCCCCATT+TGG 0.398453 5_2:+8544563 None:intergenic
AGTAAGGCTTGGTCCATTGC+TGG 0.401844 5_2:-8538751 Msa0754840:CDS
TGGTGTTCGGTCTCTTGTGC+TGG 0.403207 5_2:-8540704 Msa0754840:CDS
GAATTCTCAGGCTTGGTGTT+CGG 0.408757 5_2:-8540717 Msa0754840:intron
GAAGAATATTGAATGCTATC+AGG 0.408814 5_2:+8539889 None:intergenic
ATAGCATTCAATATTCTTCA+CGG 0.412492 5_2:-8539885 Msa0754840:CDS
TGCTTTGAATTTCAAAGAAA+AGG 0.412896 5_2:-8545364 Msa0754840:CDS
TGGAGGGCACTTGATTCAAT+TGG 0.413951 5_2:-8545562 Msa0754840:CDS
CACTCCACCCATTCTTGAAA+AGG 0.414267 5_2:+8540641 None:intergenic
ATGTTTGCCCGTATGGTTAG+TGG 0.417439 5_2:+8538846 None:intergenic
ACCTTCTTGGAATTCTTGGA+TGG 0.417941 5_2:-8544551 Msa0754840:CDS
CGTTGGTGGATCGATGGCTT+TGG 0.417946 5_2:-8539082 Msa0754840:CDS
AAAAGGTTGTCCATCTGAAT+AGG 0.421657 5_2:+8539410 None:intergenic
TTTCTCCAACCAAAGTGTAT+TGG 0.421909 5_2:-8544047 Msa0754840:CDS
ACGGGCAAACATTGTGGGTT+CGG 0.430334 5_2:-8538835 Msa0754840:CDS
ACCTGCAGATGAACTATTGA+AGG 0.430789 5_2:+8544017 None:intergenic
AAAAGGCTGTCCATCTGAAT+AGG 0.436611 5_2:+8544125 None:intergenic
ACCCACAATGTTTGCCCGTA+TGG 0.441085 5_2:+8538839 None:intergenic
TTGTCATACCTAAGCTAGTA+AGG 0.446445 5_2:-8538767 Msa0754840:CDS
AAGATTGAACCAAGTCCAAA+TGG 0.447760 5_2:-8539856 Msa0754840:CDS
AAGATTGAACCAAGTCCAAA+TGG 0.447760 5_2:-8544578 Msa0754840:CDS
ACTCAATATTTAGAAATTCA+AGG 0.453429 5_2:-8540583 Msa0754840:CDS
ACTCAATATTTAGAAATTCA+AGG 0.453429 5_2:-8545520 Msa0754840:CDS
ATATTATTAAGATTAAGATA+TGG 0.453695 5_2:+8538499 None:intergenic
ATCGTGGGTGGTGGCATAGC+AGG 0.462878 5_2:-8545917 Msa0754840:CDS
AAGGTATCCCCATTTGGACT+TGG 0.464282 5_2:+8539847 None:intergenic
ACAACTCTACCTGCAGAAAC+AGG 0.465698 5_2:+8539044 None:intergenic
TTGTTAATTTGGAATATCGT+AGG 0.467403 5_2:+8545981 None:intergenic
TAATTCACCCGTGCTTCAAA+AGG 0.468928 5_2:+8539393 None:intergenic
ACCTTATTGGAATTCTTGGA+TGG 0.470171 5_2:-8539829 Msa0754840:CDS
TTTCTCCAACCAAAGTCTAC+TGG 0.470585 5_2:-8539332 Msa0754840:CDS
CAACTGCTCTATCCCTTCAC+AGG 0.470796 5_2:-8540810 Msa0754840:intron
CAACTGCTCTATCCCTTCAC+AGG 0.470796 5_2:-8545889 Msa0754840:intron
GCACAATAACCAACGTACTT+TGG 0.472989 5_2:+8544165 None:intergenic
TGTCTAAACAGATTGTAATA+GGG 0.475468 5_2:-8539521 Msa0754840:intron
AAGGTATCCCCATTTGGACT+TGG 0.476269 5_2:+8544569 None:intergenic
ATACCATTCAATATTCTTCA+CGG 0.476649 5_2:-8544607 Msa0754840:CDS
ACCTTCAATAGTTCATCTGC+AGG 0.477018 5_2:-8544018 Msa0754840:intron
TGCTTCAACAGTTCATCTCC+AGG 0.477142 5_2:-8539303 Msa0754840:intron
GGCTCAATCTTCAGTCCAAA+AGG 0.477210 5_2:-8540872 Msa0754840:CDS
GGACCAAGCCTTACTAGCTT+AGG 0.477240 5_2:+8538759 None:intergenic
CACCGGATGACACTATAATC+AGG 0.478910 5_2:-8539109 Msa0754840:CDS
TGAATTACATCTACGGAAAA+GGG 0.482581 5_2:-8539377 Msa0754840:CDS
ACCCAATGACTCCAAATCTT+GGG 0.482693 5_2:-8539001 Msa0754840:CDS
TGGAGTGTACTTGATTCAAT+TGG 0.482722 5_2:-8540625 Msa0754840:CDS
ACCATACGGGCAAACATTGT+GGG 0.483763 5_2:-8538840 Msa0754840:CDS
AGGTGCGTGCAGTGGAGAGG+AGG 0.485424 5_2:-8539945 Msa0754840:CDS
AGGTGCGTGCAGTGGAGAGG+AGG 0.485424 5_2:-8544667 Msa0754840:CDS
GCTTGCTTCTTTAGCACCGA+TGG 0.486635 5_2:+8539185 None:intergenic
ACAAACCAATACACTTTGGT+TGG 0.487139 5_2:+8544042 None:intergenic
CTTCTTTAGCACCGATGGCT+CGG 0.487707 5_2:+8539190 None:intergenic
ACCCGCTGGTGTGTTCTGTT+AGG 0.488168 5_2:-8538797 Msa0754840:CDS
AGATTGAACCAAGTCCAAAT+GGG 0.490772 5_2:-8539855 Msa0754840:CDS
AGATTGAACCAAGTCCAAAT+GGG 0.490772 5_2:-8544577 Msa0754840:CDS
GCACAATGACCAACAAACTT+TGG 0.492071 5_2:+8539450 None:intergenic
CAGAAGTTCCAAATTAATCA+AGG 0.492791 5_2:-8540893 Msa0754840:CDS
ATTGTTGTGATTTCAAGAGT+TGG 0.493147 5_2:-8538661 Msa0754840:three_prime_UTR
GAAGAATATTGAATGGTATC+CGG 0.493585 5_2:+8544611 None:intergenic
TGTCTCAACAGATTGTAATA+GGG 0.495956 5_2:-8544236 Msa0754840:intron
CCTTCTTGGAATTCTTGGAT+GGG 0.498261 5_2:-8544550 Msa0754840:CDS
TGTTAATTTGGAATATCGTA+GGG 0.498991 5_2:+8545982 None:intergenic
CATTCAATATTCTTCACGGT+TGG 0.499725 5_2:-8539881 Msa0754840:CDS
GAAACAGGTGGACTTATTGA+TGG 0.501429 5_2:+8539059 None:intergenic
TGAATTACATCTATGGAAAA+GGG 0.502725 5_2:-8544092 Msa0754840:CDS
GCAGATAAACCAGTAGACTT+TGG 0.503117 5_2:+8539323 None:intergenic
CAGTCAGAGTCACTTCGAAC+AGG 0.503637 5_2:-8540679 Msa0754840:CDS
CTCAATATTTAGAAATTCAA+GGG 0.504248 5_2:-8540582 Msa0754840:intron
CTCAATATTTAGAAATTCAA+GGG 0.504248 5_2:-8545519 Msa0754840:intron
ATAAACCAGTAGACTTTGGT+TGG 0.504282 5_2:+8539327 None:intergenic
CATTCAATATTCTTCACGGT+TGG 0.508130 5_2:-8544603 Msa0754840:CDS
CCAATTCTGGTATGACAAGT+TGG 0.517736 5_2:+8540922 None:intergenic
TTTGCAGTGGGACAACCCGC+TGG 0.518391 5_2:-8538811 Msa0754840:CDS
TAATTCACCTGTGGTTGAAA+AGG 0.519491 5_2:+8544108 None:intergenic
CTTGGCTGGTCAACTACCTC+CGG 0.520068 5_2:-8544630 Msa0754840:CDS
CGGAGGTAGTTGACCAGCCA+AGG 0.521455 5_2:+8544631 None:intergenic
AACCATACGGGCAAACATTG+TGG 0.523320 5_2:-8538841 Msa0754840:CDS
TATAATCAGGACTCCGTTGG+TGG 0.527265 5_2:-8539096 Msa0754840:CDS
ATAAGTCCACCTGTTTCTGC+AGG 0.528684 5_2:-8539053 Msa0754840:CDS
GCATATTTCCACTAACCATA+CGG 0.529804 5_2:-8538854 Msa0754840:CDS
TTGTGGGTTCGGCTTTGCAG+TGG 0.533335 5_2:-8538824 Msa0754840:CDS
GTCCTGATTATAGTGTCATC+CGG 0.533366 5_2:+8539107 None:intergenic
ATATTCCAAATTAACAATCA+AGG 0.535648 5_2:-8545975 Msa0754840:CDS
GTCTACAAAGATGAAAATCA+AGG 0.539074 5_2:-8538704 Msa0754840:exon
GAGCATATGGCAATGAAAGA+TGG 0.539119 5_2:-8538881 Msa0754840:CDS
TCCTAACAGAACACACCAGC+GGG 0.539378 5_2:+8538796 None:intergenic
CCTTATTGGAATTCTTGGAT+GGG 0.539919 5_2:-8539828 Msa0754840:CDS
AGGAGCATGTTGTGCTCTTG+AGG 0.544378 5_2:-8538976 Msa0754840:CDS
GTATATATTCAGGTATACAT+AGG 0.544796 5_2:+8538596 None:intergenic
GCAGGTAGAGTTGTACTCGT+TGG 0.545159 5_2:-8539035 Msa0754840:CDS
CAACCGTGAAGAATATTGAA+TGG 0.545947 5_2:+8544604 None:intergenic
GAAGCAAGCTAAGGATCTAG+TGG 0.546205 5_2:-8539171 Msa0754840:CDS
TCCTAAAATAACCGAGCCAT+CGG 0.546688 5_2:-8539201 Msa0754840:CDS
TGTGGGTTCGGCTTTGCAGT+GGG 0.549726 5_2:-8538823 Msa0754840:CDS
AAGAGGTGCGTGCAGTGGAG+AGG 0.550530 5_2:-8539948 Msa0754840:CDS
AAGAGGTGCGTGCAGTGGAG+AGG 0.550530 5_2:-8544670 Msa0754840:CDS
GGTGACAAACCAATACACTT+TGG 0.550671 5_2:+8544038 None:intergenic
ACTCCACCCATTCTTGAAAA+GGG 0.552204 5_2:+8540642 None:intergenic
TGTTGTGATTTCAAGAGTTG+GGG 0.553078 5_2:-8538659 Msa0754840:three_prime_UTR
CAGCCAAGAGGTGCGTGCAG+TGG 0.558479 5_2:-8539953 Msa0754840:CDS
CAGCCAAGAGGTGCGTGCAG+TGG 0.558479 5_2:-8544675 Msa0754840:CDS
GTTGGTTATTGTGCTTTCCG+TGG 0.559926 5_2:-8544156 Msa0754840:CDS
TATTCAGGTATACATAGGGT+GGG 0.560382 5_2:+8538601 None:intergenic
TTTATATCCTATAATGGTCA+TGG 0.560462 5_2:+8538544 None:intergenic
TATGGAAAAGGGTTACGTGC+AGG 0.561657 5_2:-8544081 Msa0754840:CDS
GGACTCCGTTGGTGGATCGA+TGG 0.562109 5_2:-8539088 Msa0754840:CDS
TGGGTCTAAAATACTTGCAA+AGG 0.566510 5_2:-8544531 Msa0754840:intron
AAGGCTAACAACACAATGAA+AGG 0.567151 5_2:-8538685 Msa0754840:three_prime_UTR
TTGTACTCGTTGGAGACGCT+TGG 0.567714 5_2:-8539025 Msa0754840:CDS
TTCGATCGCCGATAGCTAAG+TGG 0.571348 5_2:-8544203 Msa0754840:CDS
AGACGAGGTTGTTGTAGCCA+TGG 0.572720 5_2:+8540963 None:intergenic
AAGGAACATGTTGTAATCGT+GGG 0.573031 5_2:-8540853 Msa0754840:CDS
AAAGGAACATGTTGTAATCG+TGG 0.573135 5_2:-8540854 Msa0754840:CDS
TATATATTCAGGTATACATA+GGG 0.573689 5_2:+8538597 None:intergenic
GTACGACAAGGCAATGATGT+AGG 0.573750 5_2:+8546016 None:intergenic
AAATTAGTGTGCTCCAGCAA+TGG 0.574226 5_2:+8538738 None:intergenic
AATCCCATCCACTTAGCTAT+CGG 0.574558 5_2:+8544195 None:intergenic
GGACTTGCCTCCTATTCAGA+TGG 0.575892 5_2:-8539420 Msa0754840:CDS
GGACTTGCCTCCTATTCAGA+TGG 0.575892 5_2:-8544135 Msa0754840:CDS
GCACGGGTGAATTACATCTA+CGG 0.577218 5_2:-8539384 Msa0754840:CDS
TGGGTCTAAACTAGTTGCAA+AGG 0.577733 5_2:-8539809 Msa0754840:intron
CACTATAATCAGGACTCCGT+TGG 0.584665 5_2:-8539099 Msa0754840:CDS
ATTATGTTTAGTAGCTCTGG+AGG 0.585207 5_2:+8539140 None:intergenic
CCATAGATGTAATTCACCTG+TGG 0.586219 5_2:+8544099 None:intergenic
AATCCCATCCACTTAGCTAT+CGG 0.586271 5_2:+8539480 None:intergenic
AAAGGAACATGTTGTAATCG+TGG 0.586526 5_2:-8545933 Msa0754840:CDS
AGGCTGTCCATCTGAATAGG+AGG 0.586613 5_2:+8544128 None:intergenic
AAGGAACATGTTGTAATCGT+GGG 0.588781 5_2:-8545932 Msa0754840:CDS
ATCGCCGATAGCTAAGTGGA+TGG 0.589305 5_2:-8544199 Msa0754840:CDS
GGTGCGTGCAGTGGAGAGGA+GGG 0.589579 5_2:-8539944 Msa0754840:CDS
GGTGCGTGCAGTGGAGAGGA+GGG 0.589579 5_2:-8544666 Msa0754840:CDS
ATCACCGATAGCTAAGTGGA+TGG 0.589651 5_2:-8539484 Msa0754840:CDS
ATTCAGGTATACATAGGGTG+GGG 0.591010 5_2:+8538602 None:intergenic
CCCATCCAAGAATTCCAAGA+AGG 0.591085 5_2:+8544550 None:intergenic
CATATTTCCACTAACCATAC+GGG 0.594920 5_2:-8538853 Msa0754840:CDS
ATGACTCCAAATCTTGGGCA+AGG 0.595031 5_2:-8538996 Msa0754840:CDS
TCAGAGTCACTTAGAACTGG+TGG 0.596903 5_2:-8545613 Msa0754840:intron
AGGTTGTCCATCTGAATAGG+AGG 0.597237 5_2:+8539413 None:intergenic
TACGGAAAAGGGTTACGCGC+AGG 0.600680 5_2:-8539366 Msa0754840:CDS
GTTGGTCATTGTGCTTTCCG+TGG 0.600904 5_2:-8539441 Msa0754840:CDS
CATGTTGTAATCGTGGGTGG+TGG 0.604156 5_2:-8540847 Msa0754840:CDS
CATGTTGTAATCGTGGGTGG+TGG 0.604156 5_2:-8545926 Msa0754840:CDS
CAGATTGTAATAGGGTGCGA+CGG 0.604784 5_2:-8539513 Msa0754840:CDS
AAACATAATGAATTCTACAC+CGG 0.605859 5_2:-8539126 Msa0754840:CDS
TTGTGCTCTTGAGGATGCAG+TGG 0.611787 5_2:-8538967 Msa0754840:CDS
ACTAGAGTTGAAACCTGTGA+AGG 0.613474 5_2:+8545876 None:intergenic
ATATTCAGGTATACATAGGG+TGG 0.615654 5_2:+8538600 None:intergenic
TTCGATCACCGATAGCTAAG+TGG 0.615756 5_2:-8539488 Msa0754840:CDS
TCAATCTTCTGATGTCCGAA+AGG 0.615839 5_2:-8545951 Msa0754840:CDS
CAGATTGTAATAGGGTGCGA+CGG 0.616990 5_2:-8544228 Msa0754840:CDS
CTAGAGTTGAAACCTGTGAA+GGG 0.619680 5_2:+8545877 None:intergenic
TCAGAGTCACTTCGAACAGG+TGG 0.621486 5_2:-8540676 Msa0754840:CDS
ATCTGAATTGAACATGTCCA+TGG 0.625416 5_2:-8540980 Msa0754840:CDS
CTAGAGTTGAAACCTGTGAA+GGG 0.625644 5_2:+8540798 None:intergenic
TCGCCGATAGCTAAGTGGAT+GGG 0.626839 5_2:-8544198 Msa0754840:CDS
TCACCGATAGCTAAGTGGAT+GGG 0.628133 5_2:-8539483 Msa0754840:CDS
GGTGCTAAAGAAGCAAGCTA+AGG 0.629803 5_2:-8539180 Msa0754840:CDS
GAGTCTATAACGTTGAGTGG+TGG 0.632438 5_2:+8546109 None:intergenic
TAGGAGTCTATAACGTTGAG+TGG 0.635567 5_2:+8546106 None:intergenic
GCTAGAGTTGAAACCTGTGA+AGG 0.639052 5_2:+8540797 None:intergenic
CAAAGCCATCGATCCACCAA+CGG 0.639408 5_2:+8539083 None:intergenic
GATTGAACCAAGTCCAAATG+GGG 0.644561 5_2:-8539854 Msa0754840:CDS
GATTGAACCAAGTCCAAATG+GGG 0.644561 5_2:-8544576 Msa0754840:CDS
ATTTCAAAGAAAAGGACGAA+AGG 0.644711 5_2:-8545356 Msa0754840:intron
ACGGATATTGTGCAGCCAAG+AGG 0.645003 5_2:-8539965 Msa0754840:intron
CTGAATAGGAGGCAAGTCCA+CGG 0.650582 5_2:+8539424 None:intergenic
CTGAATAGGAGGCAAGTCCA+CGG 0.650582 5_2:+8544139 None:intergenic
GAATATTGAATGCTATCAGG+AGG 0.654073 5_2:+8539892 None:intergenic
TGGGCTATTGTGCAGCCAAG+AGG 0.656706 5_2:-8544687 Msa0754840:intron
ATTGTGTTGAAATCTGAGGA+TGG 0.657886 5_2:-8545399 Msa0754840:CDS
GAAGGGATAGAGCAGTTGCA+AGG 0.666482 5_2:+8540815 None:intergenic
GAAGGGATAGAGCAGTTGCA+AGG 0.666482 5_2:+8545894 None:intergenic
ACTCTACCTGCAGAAACAGG+TGG 0.672264 5_2:+8539047 None:intergenic
CAGGATTGTGTTGAAATCTG+AGG 0.674897 5_2:-8545403 Msa0754840:CDS
GAATATTGAATGGTATCCGG+AGG 0.679865 5_2:+8544614 None:intergenic
GATCCAATTCTGGTACGACA+AGG 0.683776 5_2:+8546004 None:intergenic
TTTAAGAATCATAAAAGACG+AGG 0.685989 5_2:+8540948 None:intergenic
TTCCTAACAGAACACACCAG+CGG 0.695061 5_2:+8538795 None:intergenic
ATGGTTAGTGGAAATATGCG+CGG 0.713230 5_2:+8538858 None:intergenic
GAACATGTTGTAATCGTGGG+TGG 0.726429 5_2:-8540850 Msa0754840:CDS
GAACATGTTGTAATCGTGGG+TGG 0.726429 5_2:-8545929 Msa0754840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTTATGAAATGTATA+TGG - chr5_2:8539935-8539954 Msa0754840:CDS 10.0%
!! AATATTTATGAAATGTATAT+GGG - chr5_2:8539936-8539955 Msa0754840:CDS 10.0%
!! GTTTAATTATATATATGTGT+TGG - chr5_2:8538870-8538889 Msa0754840:CDS 15.0%
!!! GAAAGGTATATAATTATATA+TGG - chr5_2:8539303-8539322 Msa0754840:intron 15.0%
!! TCATAGATATTTATCATTAT+TGG - chr5_2:8539347-8539366 Msa0754840:CDS 15.0%
!!! TCTAAATAATGTAAGTTTTA+TGG + chr5_2:8539392-8539411 None:intergenic 15.0%
!!! ATATATTTGTCTTTTGTAAA+AGG + chr5_2:8539622-8539641 None:intergenic 15.0%
!! AACTTAGTTGAAAAAATATT+TGG - chr5_2:8540211-8540230 Msa0754840:intron 15.0%
!! TCTTTCATTTAACAAAAATA+AGG + chr5_2:8541573-8541592 None:intergenic 15.0%
!! TAAATGAAAGAAAAGAAAAA+AGG - chr5_2:8541582-8541601 Msa0754840:intron 15.0%
!!! AATTTTAACATAAATTTCAG+GGG + chr5_2:8541739-8541758 None:intergenic 15.0%
!!! CAATTTTAACATAAATTTCA+GGG + chr5_2:8541740-8541759 None:intergenic 15.0%
!!! AAATTTTAACATCGTAAATT+TGG - chr5_2:8541804-8541823 Msa0754840:intron 15.0%
!!! ATCTTTTCTTATGTAAAATA+TGG + chr5_2:8542274-8542293 None:intergenic 15.0%
!! TTACATAAGAAAAGATTATT+TGG - chr5_2:8542278-8542297 Msa0754840:intron 15.0%
!! TTACAATTTCATTATGAAAA+AGG + chr5_2:8542783-8542802 None:intergenic 15.0%
!!! TCTAAAATTCATATAGAATT+AGG + chr5_2:8542888-8542907 None:intergenic 15.0%
!!! TAGCTTTTAAAAAATAACAA+TGG - chr5_2:8543062-8543081 Msa0754840:intron 15.0%
!!! AGCTTTTAAAAAATAACAAT+GGG - chr5_2:8543063-8543082 Msa0754840:intron 15.0%
!!! ATTTTCTATTTAAATTTTCC+CGG - chr5_2:8543158-8543177 Msa0754840:intron 15.0%
!! TTTCATTGTTAAATTATTGT+TGG - chr5_2:8544632-8544651 Msa0754840:CDS 15.0%
!! AATATTTATGAAATGCATAA+CGG - chr5_2:8544658-8544677 Msa0754840:CDS 15.0%
!! ATTAAGTTTATATCCTATAA+TGG + chr5_2:8546107-8546126 None:intergenic 15.0%
!! ATATTCCAAATTAACAATCA+AGG - chr5_2:8538667-8538686 Msa0754840:three_prime_UTR 20.0%
!! ATATGTTATCAAAGTAATGA+TGG + chr5_2:8538813-8538832 None:intergenic 20.0%
!!! TAATTTTCTCAAACTATTAG+CGG + chr5_2:8538850-8538869 None:intergenic 20.0%
!! ACTCAATATTTAGAAATTCA+AGG - chr5_2:8539122-8539141 Msa0754840:CDS 20.0%
!! CTCAATATTTAGAAATTCAA+GGG - chr5_2:8539123-8539142 Msa0754840:CDS 20.0%
!! AAATTCATTTCTAAATTGTG+GGG + chr5_2:8539451-8539470 None:intergenic 20.0%
!! GAAATTCATTTCTAAATTGT+GGG + chr5_2:8539452-8539471 None:intergenic 20.0%
!! TGAAATTCATTTCTAAATTG+TGG + chr5_2:8539453-8539472 None:intergenic 20.0%
!!! CTTTACATTCACTTTTTATT+AGG + chr5_2:8539511-8539530 None:intergenic 20.0%
!! TTACAAAAGACAAATATATG+AGG - chr5_2:8539623-8539642 Msa0754840:intron 20.0%
!! TACAAAAGACAAATATATGA+GGG - chr5_2:8539624-8539643 Msa0754840:intron 20.0%
!! AGTTCGTAAAAAATTAATCA+CGG + chr5_2:8540195-8540214 None:intergenic 20.0%
!! AAAAAGTTTATTAGTGTAGT+TGG - chr5_2:8541424-8541443 Msa0754840:intron 20.0%
!!! AAAAGGTAATCAATTTTCTA+AGG - chr5_2:8541599-8541618 Msa0754840:intron 20.0%
!!! ATTTTCTAAGGTGAATTTTA+TGG - chr5_2:8541611-8541630 Msa0754840:intron 20.0%
!!! GCAATTTTAACATAAATTTC+AGG + chr5_2:8541741-8541760 None:intergenic 20.0%
!! TATATATTCAAGTGTACATA+CGG + chr5_2:8542106-8542125 None:intergenic 20.0%
!! ACAAATCAAAATACATTGTT+TGG - chr5_2:8542637-8542656 Msa0754840:intron 20.0%
!!! TTCGGATAAACTTTTTAAAT+TGG + chr5_2:8543455-8543474 None:intergenic 20.0%
!! ATTTAAAAAGTTTATCCGAA+CGG - chr5_2:8543455-8543474 Msa0754840:intron 20.0%
!!! TTTGTTTTGGAAAATTACTA+CGG + chr5_2:8543535-8543554 None:intergenic 20.0%
!! ACTCAATATTTAGAAATTCA+AGG - chr5_2:8539122-8539141 Msa0754840:CDS 20.0%
!! CTCAATATTTAGAAATTCAA+GGG - chr5_2:8539123-8539142 Msa0754840:CDS 20.0%
!!! TTTTCACTTCTTAATACAAT+GGG + chr5_2:8544533-8544552 None:intergenic 20.0%
!!! TTTTTCACTTCTTAATACAA+TGG + chr5_2:8544534-8544553 None:intergenic 20.0%
!! TATTAAGAAGTGAAAAATTG+TGG - chr5_2:8544537-8544556 Msa0754840:CDS 20.0%
!! ATTAAGAAGTGAAAAATTGT+GGG - chr5_2:8544538-8544557 Msa0754840:CDS 20.0%
!! TTGCAAATCTAATAAAATCA+TGG + chr5_2:8544909-8544928 None:intergenic 20.0%
!!! TTTTATTAGATTTGCAAACT+TGG - chr5_2:8544912-8544931 Msa0754840:intron 20.0%
!!! TCAATTTGTTAACACTTTTT+AGG + chr5_2:8545096-8545115 None:intergenic 20.0%
!! TATATATTCAGGTATACATA+GGG + chr5_2:8546048-8546067 None:intergenic 20.0%
!! TGAATATTGTGTATATATTC+AGG + chr5_2:8546059-8546078 None:intergenic 20.0%
!! TGTTAATTTGGAATATCGTA+GGG + chr5_2:8538663-8538682 None:intergenic 25.0%
!! TTGTTAATTTGGAATATCGT+AGG + chr5_2:8538664-8538683 None:intergenic 25.0%
!! TTATATATATGTGTTGGTGT+TGG - chr5_2:8538876-8538895 Msa0754840:CDS 25.0%
!! TGCTTTGAATTTCAAAGAAA+AGG - chr5_2:8539278-8539297 Msa0754840:intron 25.0%
!!! TATCATTATTGGTTTTTGTC+TGG - chr5_2:8539358-8539377 Msa0754840:CDS 25.0%
! AAAGAAAGACAAAAATCTGA+AGG - chr5_2:8539541-8539560 Msa0754840:intron 25.0%
! AATCATTTATAAACTATCCC+TGG + chr5_2:8539822-8539841 None:intergenic 25.0%
! TTTAGTCATTGATACATAGT+TGG - chr5_2:8539910-8539929 Msa0754840:CDS 25.0%
! ATACCATTCAATATTCTTCA+CGG - chr5_2:8540035-8540054 Msa0754840:intron 25.0%
! AAAGGATCTTACAAACATAA+TGG - chr5_2:8540336-8540355 Msa0754840:intron 25.0%
!!! TCAATTTGTTAGCAGTTTTT+AGG + chr5_2:8540381-8540400 None:intergenic 25.0%
! TGAATTACATCTATGGAAAA+GGG - chr5_2:8540550-8540569 Msa0754840:intron 25.0%
! TTTCATCTGAACAATAAACT+CGG + chr5_2:8540687-8540706 None:intergenic 25.0%
! TGAAAAATAGTTGAGTTCTA+TGG - chr5_2:8540702-8540721 Msa0754840:CDS 25.0%
!!! TATTTCATTTGAGTTGCTTA+CGG - chr5_2:8541315-8541334 Msa0754840:intron 25.0%
!! AAGAGTGAGTAAAAATGTTT+TGG - chr5_2:8541678-8541697 Msa0754840:intron 25.0%
!!! TACTCAGAATTTTTTACCTT+TGG - chr5_2:8541885-8541904 Msa0754840:intron 25.0%
!!! ACTCAGAATTTTTTACCTTT+GGG - chr5_2:8541886-8541905 Msa0754840:intron 25.0%
! TAAGTTAAATTTGTGAGCTA+TGG - chr5_2:8542141-8542160 Msa0754840:intron 25.0%
! CATAAGAAAAGATTATTTGG+CGG - chr5_2:8542281-8542300 Msa0754840:intron 25.0%
!! AAAATACATTGTTTGGTCTT+TGG - chr5_2:8542644-8542663 Msa0754840:intron 25.0%
!!! TGTAAATTGTGTTGTTTGTA+AGG - chr5_2:8542798-8542817 Msa0754840:intron 25.0%
!!! AATGTATTTTTGATGTGTGT+TGG + chr5_2:8542968-8542987 None:intergenic 25.0%
! AAAACAAAGAAAGTTACTCT+TGG - chr5_2:8543328-8543347 Msa0754840:intron 25.0%
!! GAAATTTATCTTTTCCTTTC+TGG - chr5_2:8543358-8543377 Msa0754840:intron 25.0%
! TTTAAGAATCATAAAAGACG+AGG + chr5_2:8543697-8543716 None:intergenic 25.0%
! AATATATGCATTGTGCAATA+AGG + chr5_2:8544125-8544144 None:intergenic 25.0%
! TTATCCACACATCATATATA+TGG + chr5_2:8544420-8544439 None:intergenic 25.0%
!! ATCTTAGATATTTTCACTAC+TGG - chr5_2:8544451-8544470 Msa0754840:intron 25.0%
! TCAAATGATAAAATGATGCA+TGG + chr5_2:8544585-8544604 None:intergenic 25.0%
!!! TATCATTTGAGTTGTACTAA+TGG - chr5_2:8544595-8544614 Msa0754840:CDS 25.0%
!!! ATCATTTGAGTTGTACTAAT+GGG - chr5_2:8544596-8544615 Msa0754840:CDS 25.0%
! ATAGCATTCAATATTCTTCA+CGG - chr5_2:8544757-8544776 Msa0754840:intron 25.0%
!! AGGTTAGTCATTGTAATTTA+TGG - chr5_2:8544853-8544872 Msa0754840:intron 25.0%
! ATTGTAATTTATGGTGTGTT+TGG - chr5_2:8544862-8544881 Msa0754840:intron 25.0%
! GAATTATGTTTAAACACAGT+CGG + chr5_2:8544962-8544981 None:intergenic 25.0%
! TATTAATCTAACCACATGAT+TGG - chr5_2:8545002-8545021 Msa0754840:intron 25.0%
! TATTACAATCTGTTTAGACA+TGG + chr5_2:8545121-8545140 None:intergenic 25.0%
! ATGTCTAAACAGATTGTAAT+AGG - chr5_2:8545120-8545139 Msa0754840:intron 25.0%
! TGTCTAAACAGATTGTAATA+GGG - chr5_2:8545121-8545140 Msa0754840:intron 25.0%
! GTTACTAATAAGTCCATATA+TGG - chr5_2:8545364-8545383 Msa0754840:CDS 25.0%
! TCAGGTAATTTAACCATATA+TGG + chr5_2:8545380-8545399 None:intergenic 25.0%
! TTCATATGAACAATAAACTC+AGG + chr5_2:8545398-8545417 None:intergenic 25.0%
! TGAAAAATAGTTGAGTTCAA+TGG - chr5_2:8545414-8545433 Msa0754840:intron 25.0%
! AAACATAATGAATTCTACAC+CGG - chr5_2:8545516-8545535 Msa0754840:intron 25.0%
! GTATATATTCAGGTATACAT+AGG + chr5_2:8546049-8546068 None:intergenic 25.0%
! TTTATATCCTATAATGGTCA+TGG + chr5_2:8546101-8546120 None:intergenic 25.0%
CAATTCAGTTTGTGTTTGAT+AGG + chr5_2:8538558-8538577 None:intergenic 30.0%
TTGAGCCTTGATTGTTAATT+TGG + chr5_2:8538675-8538694 None:intergenic 30.0%
TGGTGATAAAGAATAGATTG+AGG + chr5_2:8538793-8538812 None:intergenic 30.0%
GATATAAGAATTGTGCAACA+AGG + chr5_2:8539184-8539203 None:intergenic 30.0%
GTTCATAAATTTGGCTATAC+AGG - chr5_2:8539220-8539239 Msa0754840:intron 30.0%
ATTTCAAAGAAAAGGACGAA+AGG - chr5_2:8539286-8539305 Msa0754840:intron 30.0%
GAAATGAATTTCACATGAAG+TGG - chr5_2:8539460-8539479 Msa0754840:CDS 30.0%
!! GAAGTATTGTGCTTTGTAAA+AGG + chr5_2:8539864-8539883 None:intergenic 30.0%
AGCACAATACTTCGAAAATT+TGG - chr5_2:8539871-8539890 Msa0754840:CDS 30.0%
AATACTTCGAAAATTTGGCT+TGG - chr5_2:8539876-8539895 Msa0754840:CDS 30.0%
! ATACTTCGAAAATTTGGCTT+GGG - chr5_2:8539877-8539896 Msa0754840:CDS 30.0%
GAAGAATATTGAATGGTATC+CGG + chr5_2:8540034-8540053 None:intergenic 30.0%
!! CATTGACTCATTGTGATTTA+TGG - chr5_2:8540139-8540158 Msa0754840:intron 30.0%
CTAAAAACATAGTGCACAAA+AGG - chr5_2:8540318-8540337 Msa0754840:intron 30.0%
ATGTCTCAACAGATTGTAAT+AGG - chr5_2:8540405-8540424 Msa0754840:intron 30.0%
TGTCTCAACAGATTGTAATA+GGG - chr5_2:8540406-8540425 Msa0754840:intron 30.0%
GTGAATTACATCTATGGAAA+AGG - chr5_2:8540549-8540568 Msa0754840:intron 30.0%
CATATTTCCAATAACCATAC+TGG - chr5_2:8541077-8541096 Msa0754840:intron 30.0%
ATGTTAGGAACAATATTGTC+AGG - chr5_2:8541148-8541167 Msa0754840:intron 30.0%
TGTTAGGAACAATATTGTCA+GGG - chr5_2:8541149-8541168 Msa0754840:intron 30.0%
ATCATTGAAATCAACATGAG+TGG + chr5_2:8541356-8541375 None:intergenic 30.0%
! ATACTATGATGATGCCTTAT+CGG - chr5_2:8541654-8541673 Msa0754840:intron 30.0%
! TTTTGGATAGATCACATAGA+AGG - chr5_2:8541695-8541714 Msa0754840:intron 30.0%
!!! AGAATTTTTTACCTTTGGGA+TGG - chr5_2:8541890-8541909 Msa0754840:intron 30.0%
! TTTTCATCTTTGTAGACTCT+CGG + chr5_2:8542016-8542035 None:intergenic 30.0%
GTCTACAAAGATGAAAATCA+AGG - chr5_2:8542019-8542038 Msa0754840:intron 30.0%
CCATTAAATTACTCAATCTG+CGG - chr5_2:8542197-8542216 Msa0754840:intron 30.0%
CATTAAATTACTCAATCTGC+GGG - chr5_2:8542198-8542217 Msa0754840:intron 30.0%
ATTAAATTACTCAATCTGCG+GGG - chr5_2:8542199-8542218 Msa0754840:intron 30.0%
TCATTTGAACTTGGAAAGTT+GGG + chr5_2:8542352-8542371 None:intergenic 30.0%
TCATCATTCTCATTTGAACT+TGG + chr5_2:8542361-8542380 None:intergenic 30.0%
! TAGTTAGAGAGCATGAATAA+GGG - chr5_2:8542382-8542401 Msa0754840:intron 30.0%
TACGGAACATAATCATCTTT+AGG - chr5_2:8542446-8542465 Msa0754840:intron 30.0%
!! CCAAATTAAATGCTTTTTGG+TGG + chr5_2:8542495-8542514 None:intergenic 30.0%
!! CCACCAAAAAGCATTTAATT+TGG - chr5_2:8542492-8542511 Msa0754840:intron 30.0%
! CCACCAAATTAAATGCTTTT+TGG + chr5_2:8542498-8542517 None:intergenic 30.0%
!! CCAAAAAGCATTTAATTTGG+TGG - chr5_2:8542495-8542514 Msa0754840:intron 30.0%
CTTTGACTATTGACAATGAT+GGG + chr5_2:8542562-8542581 None:intergenic 30.0%
TCTTTGACTATTGACAATGA+TGG + chr5_2:8542563-8542582 None:intergenic 30.0%
AGCATGATATATAGCTCAAA+AGG - chr5_2:8542582-8542601 Msa0754840:intron 30.0%
GCATGATATATAGCTCAAAA+GGG - chr5_2:8542583-8542602 Msa0754840:intron 30.0%
AAAAAGGTTATTTGTCGTGA+AGG + chr5_2:8542767-8542786 None:intergenic 30.0%
ATACATTCTGCCTACAATAT+CGG + chr5_2:8542843-8542862 None:intergenic 30.0%
CAGTGAATATGTAAGAATCA+CGG - chr5_2:8543011-8543030 Msa0754840:intron 30.0%
TTGTCAATGTAACCTATGTT+TGG + chr5_2:8543112-8543131 None:intergenic 30.0%
AAGAAGAAAAAAAGTCAAGC+AGG + chr5_2:8543202-8543221 None:intergenic 30.0%
!!! TAACTTTCTTTGTTTTGAGG+TGG + chr5_2:8543324-8543343 None:intergenic 30.0%
!!! GAGTAACTTTCTTTGTTTTG+AGG + chr5_2:8543327-8543346 None:intergenic 30.0%
CAGAAGTTCCAAATTAATCA+AGG - chr5_2:8543749-8543768 Msa0754840:intron 30.0%
AGATTGAGCCTTGATTAATT+TGG + chr5_2:8543760-8543779 None:intergenic 30.0%
!! ATCCTCTTCTTTGAAATTGA+AGG + chr5_2:8544224-8544243 None:intergenic 30.0%
ATTTCAAAGAAGAGGATGAA+AGG - chr5_2:8544227-8544246 Msa0754840:CDS 30.0%
GTTAGTGCAGTATTTGATAT+TGG - chr5_2:8544358-8544377 Msa0754840:intron 30.0%
! ATTTGATATTGGTGCTTGAT+AGG - chr5_2:8544369-8544388 Msa0754840:intron 30.0%
!!! TATATGGATGGACCTTTTTT+TGG + chr5_2:8544404-8544423 None:intergenic 30.0%
ATAAAATGATGCATGGACAT+CGG + chr5_2:8544578-8544597 None:intergenic 30.0%
GAAGAATATTGAATGCTATC+AGG + chr5_2:8544756-8544775 None:intergenic 30.0%
AACTTGGTTGACAAAACATT+TGG - chr5_2:8544928-8544947 Msa0754840:intron 30.0%
! TTTTGTGCAGTATGTTTTCA+GGG + chr5_2:8545034-8545053 None:intergenic 30.0%
TGAATTACATCTACGGAAAA+GGG - chr5_2:8545265-8545284 Msa0754840:intron 30.0%
TTCATTATGTTTAGTAGCTC+TGG + chr5_2:8545508-8545527 None:intergenic 30.0%
GTCTACAAAGATGAAAATCA+AGG - chr5_2:8542019-8542038 Msa0754840:intron 30.0%
ATTGTTGTGATTTCAAGAGT+TGG - chr5_2:8545981-8546000 Msa0754840:CDS 30.0%
TTGTTGTGATTTCAAGAGTT+GGG - chr5_2:8545982-8546001 Msa0754840:CDS 30.0%
AGAAATACCATGACCATTAT+AGG - chr5_2:8546091-8546110 Msa0754840:five_prime_UTR 30.0%
CGATTACAACATGTTCCTTT+CGG + chr5_2:8538709-8538728 None:intergenic 35.0%
AAAGGAACATGTTGTAATCG+TGG - chr5_2:8538709-8538728 Msa0754840:exon 35.0%
AAGGAACATGTTGTAATCGT+GGG - chr5_2:8538710-8538729 Msa0754840:exon 35.0%
!! GTTGAACTTGTTGAATTTCC+AGG - chr5_2:8538976-8538995 Msa0754840:CDS 35.0%
! CTTGAGCTGGTTCATAAATT+TGG - chr5_2:8539211-8539230 Msa0754840:intron 35.0%
ATTGTGTTGAAATCTGAGGA+TGG - chr5_2:8539243-8539262 Msa0754840:intron 35.0%
TGGTTAGATCCATATGACAT+TGG - chr5_2:8539480-8539499 Msa0754840:CDS 35.0%
TAGGTGAAACCAATGTCATA+TGG + chr5_2:8539492-8539511 None:intergenic 35.0%
!! TGTCTTTTGTAAAAGGTGCA+CGG + chr5_2:8539615-8539634 None:intergenic 35.0%
!! ATACCCTTTAGCCTTAACTA+GGG - chr5_2:8539747-8539766 Msa0754840:intron 35.0%
!!! TGAGAGGTTTTTTAGTCTAC+TGG + chr5_2:8539782-8539801 None:intergenic 35.0%
!! TTTGTAAAAGGCGTCTTCAT+AGG + chr5_2:8539852-8539871 None:intergenic 35.0%
CAACCGTGAAGAATATTGAA+TGG + chr5_2:8540041-8540060 None:intergenic 35.0%
CATTCAATATTCTTCACGGT+TGG - chr5_2:8540039-8540058 Msa0754840:intron 35.0%
AAGATTGAACCAAGTCCAAA+TGG - chr5_2:8540064-8540083 Msa0754840:intron 35.0%
AGATTGAACCAAGTCCAAAT+GGG - chr5_2:8540065-8540084 Msa0754840:intron 35.0%
! TGGGTCTAAAATACTTGCAA+AGG - chr5_2:8540111-8540130 Msa0754840:intron 35.0%
AAGCTAACCACATACATGAT+TGG - chr5_2:8540287-8540306 Msa0754840:intron 35.0%
GTCATAACCAATCATGTATG+TGG + chr5_2:8540297-8540316 None:intergenic 35.0%
TAATTCACCTGTGGTTGAAA+AGG + chr5_2:8540537-8540556 None:intergenic 35.0%
TTTCTCCAACCAAAGTGTAT+TGG - chr5_2:8540595-8540614 Msa0754840:CDS 35.0%
ACAAACCAATACACTTTGGT+TGG + chr5_2:8540603-8540622 None:intergenic 35.0%
AAATAGTTGAGTTCTATGGC+AGG - chr5_2:8540706-8540725 Msa0754840:CDS 35.0%
CTAAGGATCTAGTAGAAAAC+TGG - chr5_2:8540767-8540786 Msa0754840:intron 35.0%
TCCATTATGTTTAGTAGCTC+CGG + chr5_2:8540796-8540815 None:intergenic 35.0%
!! AAACATAATGGATTCTACGC+CGG - chr5_2:8540804-8540823 Msa0754840:intron 35.0%
! TATAGTCTTGACTCCATTGA+TGG - chr5_2:8540834-8540853 Msa0754840:CDS 35.0%
! GAAACAGGTGGATTTATCAA+TGG + chr5_2:8540874-8540893 None:intergenic 35.0%
!! ATAAATCCACCTGTTTCTAG+AGG - chr5_2:8540877-8540896 Msa0754840:CDS 35.0%
ATCCAATGACTCCAAATCTT+GGG - chr5_2:8540929-8540948 Msa0754840:CDS 35.0%
! GAAGACGCTTTTAGATCATA+TGG - chr5_2:8541036-8541055 Msa0754840:intron 35.0%
GATCATATGGCAATGAAAGA+TGG - chr5_2:8541049-8541068 Msa0754840:intron 35.0%
AGAGCGAGGAAAAATAGTTA+AGG - chr5_2:8541174-8541193 Msa0754840:intron 35.0%
GAGCGAGGAAAAATAGTTAA+GGG - chr5_2:8541175-8541194 Msa0754840:intron 35.0%
TTTACTCACTCTTTCCGATA+AGG + chr5_2:8541671-8541690 None:intergenic 35.0%
TCCCCTAATTCTATGTACTT+TGG - chr5_2:8541918-8541937 Msa0754840:intron 35.0%
CCCAAAGTACATAGAATTAG+GGG + chr5_2:8541922-8541941 None:intergenic 35.0%
CCCCTAATTCTATGTACTTT+GGG - chr5_2:8541919-8541938 Msa0754840:intron 35.0%
CCCCAAAGTACATAGAATTA+GGG + chr5_2:8541923-8541942 None:intergenic 35.0%
CCCTAATTCTATGTACTTTG+GGG - chr5_2:8541920-8541939 Msa0754840:intron 35.0%
ACCCCAAAGTACATAGAATT+AGG + chr5_2:8541924-8541943 None:intergenic 35.0%
TGTTGTGATGTCAAGAGTTA+AGG - chr5_2:8542061-8542080 Msa0754840:intron 35.0%
ATTCAAGTGTACATACGGTA+GGG + chr5_2:8542101-8542120 None:intergenic 35.0%
TATTCAAGTGTACATACGGT+AGG + chr5_2:8542102-8542121 None:intergenic 35.0%
AAATTTGTGAGCTATGGCTT+TGG - chr5_2:8542147-8542166 Msa0754840:intron 35.0%
AATTTGTGAGCTATGGCTTT+GGG - chr5_2:8542148-8542167 Msa0754840:intron 35.0%
CCGCAGATTGAGTAATTTAA+TGG + chr5_2:8542200-8542219 None:intergenic 35.0%
TTAAATTACTCAATCTGCGG+GGG - chr5_2:8542200-8542219 Msa0754840:intron 35.0%
CTCATTTGAACTTGGAAAGT+TGG + chr5_2:8542353-8542372 None:intergenic 35.0%
! CTAGTTAGAGAGCATGAATA+AGG - chr5_2:8542381-8542400 Msa0754840:intron 35.0%
TCAAGTTAGCAAGTTTCATG+GGG + chr5_2:8542411-8542430 None:intergenic 35.0%
CTCAAGTTAGCAAGTTTCAT+GGG + chr5_2:8542412-8542431 None:intergenic 35.0%
!! AAACTTGCTAACTTGAGGAA+AGG - chr5_2:8542415-8542434 Msa0754840:intron 35.0%
GATGATTATGTTCCGTAAGA+GGG + chr5_2:8542443-8542462 None:intergenic 35.0%
AGATGATTATGTTCCGTAAG+AGG + chr5_2:8542444-8542463 None:intergenic 35.0%
AAGAAATTAAGGTGCGATAG+TGG + chr5_2:8542531-8542550 None:intergenic 35.0%
ACATTTAGTCTGTGTGTGTT+TGG - chr5_2:8542983-8543002 Msa0754840:intron 35.0%
TAGCATGTGATACCAAACAT+AGG - chr5_2:8543097-8543116 Msa0754840:intron 35.0%
ATTGGGCATGTTTGTGAAAT+GGG + chr5_2:8543295-8543314 None:intergenic 35.0%
!!! TTTTGAGGTGGTTGAACATT+GGG + chr5_2:8543312-8543331 None:intergenic 35.0%
ACTATCATCGAAGAGTTGAA+TGG + chr5_2:8543398-8543417 None:intergenic 35.0%
AAAATATATCCGGTACCGTT+CGG + chr5_2:8543473-8543492 None:intergenic 35.0%
CGCAAAGACCAAAATATATC+CGG + chr5_2:8543483-8543502 None:intergenic 35.0%
!!! CGGATATATTTTGGTCTTTG+CGG - chr5_2:8543481-8543500 Msa0754840:intron 35.0%
!!! GGATATATTTTGGTCTTTGC+GGG - chr5_2:8543482-8543501 Msa0754840:intron 35.0%
!!! GTAGTGGATACGTTTTGTTT+TGG + chr5_2:8543548-8543567 None:intergenic 35.0%
ATCTGAATTGAACATGTCCA+TGG - chr5_2:8543662-8543681 Msa0754840:intron 35.0%
! CGATTACAACATGTTCCTTT+TGG + chr5_2:8538709-8538728 None:intergenic 35.0%
AAAGGAACATGTTGTAATCG+TGG - chr5_2:8538709-8538728 Msa0754840:exon 35.0%
AAGGAACATGTTGTAATCGT+GGG - chr5_2:8538710-8538729 Msa0754840:exon 35.0%
TGGAGTGTACTTGATTCAAT+TGG - chr5_2:8544017-8544036 Msa0754840:intron 35.0%
GTTCATAATATCAGCTGTAC+AGG - chr5_2:8544161-8544180 Msa0754840:CDS 35.0%
ATAATATCAGCTGTACAGGA+TGG - chr5_2:8544165-8544184 Msa0754840:CDS 35.0%
TGCCTTCAATTTCAAAGAAG+AGG - chr5_2:8544219-8544238 Msa0754840:CDS 35.0%
! ACATATTCAGTCAGAAGTGT+TGG + chr5_2:8544273-8544292 None:intergenic 35.0%
ACTTCTGACTGAATATGTGT+TGG - chr5_2:8544275-8544294 Msa0754840:intron 35.0%
CCACACATCATATATATGGA+TGG + chr5_2:8544416-8544435 None:intergenic 35.0%
CCATCCATATATATGATGTG+TGG - chr5_2:8544413-8544432 Msa0754840:intron 35.0%
! TTTTCTTCCTCCTACCAAAT+AGG - chr5_2:8544489-8544508 Msa0754840:intron 35.0%
TAAAATGATGCATGGACATC+GGG + chr5_2:8544577-8544596 None:intergenic 35.0%
TTGTACTAATGGGACGTTAT+TGG - chr5_2:8544606-8544625 Msa0754840:CDS 35.0%
GAATATTGAATGCTATCAGG+AGG + chr5_2:8544753-8544772 None:intergenic 35.0%
CATTCAATATTCTTCACGGT+TGG - chr5_2:8540039-8540058 Msa0754840:intron 35.0%
AAGATTGAACCAAGTCCAAA+TGG - chr5_2:8540064-8540083 Msa0754840:intron 35.0%
AGATTGAACCAAGTCCAAAT+GGG - chr5_2:8540065-8540084 Msa0754840:intron 35.0%
GGATACCTTATTGGAATTCT+TGG - chr5_2:8544809-8544828 Msa0754840:intron 35.0%
ACCTTATTGGAATTCTTGGA+TGG - chr5_2:8544813-8544832 Msa0754840:intron 35.0%
CCTTATTGGAATTCTTGGAT+GGG - chr5_2:8544814-8544833 Msa0754840:intron 35.0%
! TCTAACCACATGATTGGTTA+TGG - chr5_2:8545008-8545027 Msa0754840:intron 35.0%
! CTTTTGTGCAGTATGTTTTC+AGG + chr5_2:8545035-8545054 None:intergenic 35.0%
CTGAAAACATACTGCACAAA+AGG - chr5_2:8545033-8545052 Msa0754840:intron 35.0%
TAGGACTAAAGCTTCAGAAT+TGG + chr5_2:8545077-8545096 None:intergenic 35.0%
! TTTTCTGAGCCAAAGTTTGT+TGG - chr5_2:8545183-8545202 Msa0754840:intron 35.0%
AAAAGGTTGTCCATCTGAAT+AGG + chr5_2:8545235-8545254 None:intergenic 35.0%
GTGAATTACATCTACGGAAA+AGG - chr5_2:8545264-8545283 Msa0754840:intron 35.0%
ATAAACCAGTAGACTTTGGT+TGG + chr5_2:8545318-8545337 None:intergenic 35.0%
TGGACTTATTAGTAACAACC+TGG + chr5_2:8545360-8545379 None:intergenic 35.0%
AAATAGTTGAGTTCAATGGC+AGG - chr5_2:8545418-8545437 Msa0754840:intron 35.0%
!! ATTATGTTTAGTAGCTCTGG+AGG + chr5_2:8545505-8545524 None:intergenic 35.0%
GCATATTTCCACTAACCATA+CGG - chr5_2:8545788-8545807 Msa0754840:intron 35.0%
CATATTTCCACTAACCATAC+GGG - chr5_2:8545789-8545808 Msa0754840:intron 35.0%
TTGTCATACCTAAGCTAGTA+AGG - chr5_2:8545875-8545894 Msa0754840:intron 35.0%
AAGGCTAACAACACAATGAA+AGG - chr5_2:8545957-8545976 Msa0754840:CDS 35.0%
TGTTGTGATTTCAAGAGTTG+GGG - chr5_2:8545983-8546002 Msa0754840:CDS 35.0%
TATTCAGGTATACATAGGGT+GGG + chr5_2:8546044-8546063 None:intergenic 35.0%
ATATTCAGGTATACATAGGG+TGG + chr5_2:8546045-8546064 None:intergenic 35.0%
TAGGAGTCTATAACGTTGAG+TGG + chr5_2:8538539-8538558 None:intergenic 40.0%
ATATCGTAGGGATCCAATTC+TGG + chr5_2:8538651-8538670 None:intergenic 40.0%
TCAATCTTCTGATGTCCGAA+AGG - chr5_2:8538691-8538710 Msa0754840:three_prime_UTR 40.0%
CTAGAGTTGAAACCTGTGAA+GGG + chr5_2:8538768-8538787 None:intergenic 40.0%
ACTAGAGTTGAAACCTGTGA+AGG + chr5_2:8538769-8538788 None:intergenic 40.0%
TCTCAAACTATTAGCGGTGT+CGG + chr5_2:8538844-8538863 None:intergenic 40.0%
GTGTTATCAGCTATGAAGCA+CGG + chr5_2:8538948-8538967 None:intergenic 40.0%
! ACTTGTTGAATTTCCAGGCT+TGG - chr5_2:8538981-8539000 Msa0754840:CDS 40.0%
TCACTCACCCTTTCCAAAAA+TGG - chr5_2:8539056-8539075 Msa0754840:CDS 40.0%
CACTCACCCTTTCCAAAAAT+GGG - chr5_2:8539057-8539076 Msa0754840:CDS 40.0%
CAGGATTGTGTTGAAATCTG+AGG - chr5_2:8539239-8539258 Msa0754840:intron 40.0%
AGAAACTGAGACTAAGTCGT+CGG - chr5_2:8539409-8539428 Msa0754840:CDS 40.0%
!! GTCTTTTGTAAAAGGTGCAC+GGG + chr5_2:8539614-8539633 None:intergenic 40.0%
! TGAGGGTTTTTACAACTCTG+TGG - chr5_2:8539641-8539660 Msa0754840:intron 40.0%
!! CATACCCTTTAGCCTTAACT+AGG - chr5_2:8539746-8539765 Msa0754840:intron 40.0%
!! TACCCTTTAGCCTTAACTAG+GGG - chr5_2:8539748-8539767 Msa0754840:intron 40.0%
CTTGATTCTCAAGCAATGAG+AGG + chr5_2:8539798-8539817 None:intergenic 40.0%
CTCTCATTGCTTGAGAATCA+AGG - chr5_2:8539796-8539815 Msa0754840:intron 40.0%
!! TCGAAAATTTGGCTTGGGTT+CGG - chr5_2:8539882-8539901 Msa0754840:CDS 40.0%
GAATATTGAATGGTATCCGG+AGG + chr5_2:8540031-8540050 None:intergenic 40.0%
GATTGAACCAAGTCCAAATG+GGG - chr5_2:8540066-8540085 Msa0754840:intron 40.0%
GGATACCTTCTTGGAATTCT+TGG - chr5_2:8540087-8540106 Msa0754840:intron 40.0%
ACCTTCTTGGAATTCTTGGA+TGG - chr5_2:8540091-8540110 Msa0754840:intron 40.0%
CCTTCTTGGAATTCTTGGAT+GGG - chr5_2:8540092-8540111 Msa0754840:intron 40.0%
AATCCCATCCACTTAGCTAT+CGG + chr5_2:8540450-8540469 None:intergenic 40.0%
! TTTTCTGAGCCAAAGTACGT+TGG - chr5_2:8540468-8540487 Msa0754840:intron 40.0%
GCACAATAACCAACGTACTT+TGG + chr5_2:8540480-8540499 None:intergenic 40.0%
AAAAGGCTGTCCATCTGAAT+AGG + chr5_2:8540520-8540539 None:intergenic 40.0%
CCATAGATGTAATTCACCTG+TGG + chr5_2:8540546-8540565 None:intergenic 40.0%
CCACAGGTGAATTACATCTA+TGG - chr5_2:8540543-8540562 Msa0754840:intron 40.0%
TACACTTTGGTTGGAGAAAC+AGG + chr5_2:8540594-8540613 None:intergenic 40.0%
GGTGACAAACCAATACACTT+TGG + chr5_2:8540607-8540626 None:intergenic 40.0%
ACCTTCAATAGTTCATCTGC+AGG - chr5_2:8540624-8540643 Msa0754840:CDS 40.0%
ACCTGCAGATGAACTATTGA+AGG + chr5_2:8540628-8540647 None:intergenic 40.0%
ATTATGTTTAGTAGCTCCGG+AGG + chr5_2:8540793-8540812 None:intergenic 40.0%
TCCGGAGCTACTAAACATAA+TGG - chr5_2:8540792-8540811 Msa0754840:intron 40.0%
GTCAAGACTATAGTGTCATC+CGG + chr5_2:8540826-8540845 None:intergenic 40.0%
! ACAACTCTACCTCTAGAAAC+AGG + chr5_2:8540889-8540908 None:intergenic 40.0%
CATCCAATGACTCCAAATCT+TGG - chr5_2:8540928-8540947 Msa0754840:CDS 40.0%
AGGTTTGCCAGTATGGTTAT+TGG + chr5_2:8541087-8541106 None:intergenic 40.0%
TTCCTAACATAACACACCAG+CGG + chr5_2:8541138-8541157 None:intergenic 40.0%
CGAGGAAAAATAGTTAAGGG+TGG - chr5_2:8541178-8541197 Msa0754840:intron 40.0%
TTGTCATACCTAAGCTAGCA+AGG - chr5_2:8541956-8541975 Msa0754840:intron 40.0%
AAATTAGTGTGCTCCAGCAA+TGG + chr5_2:8541988-8542007 None:intergenic 40.0%
TCATGTGCATTGCACAATGT+TGG + chr5_2:8542176-8542195 None:intergenic 40.0%
CCTCAAGTTAGCAAGTTTCA+TGG + chr5_2:8542413-8542432 None:intergenic 40.0%
!! CCATGAAACTTGCTAACTTG+AGG - chr5_2:8542410-8542429 Msa0754840:intron 40.0%
! GGGTGTAGTGGAAGAAATTA+AGG + chr5_2:8542542-8542561 None:intergenic 40.0%
!! ATTGACAATGATGGGTGTAG+TGG + chr5_2:8542554-8542573 None:intergenic 40.0%
GTCTTTGGTATGATGCATGA+AGG - chr5_2:8542659-8542678 Msa0754840:intron 40.0%
TGGTATGATGCATGAAGGTT+TGG - chr5_2:8542664-8542683 Msa0754840:intron 40.0%
TATGATGCATGAAGGTTTGG+CGG - chr5_2:8542667-8542686 Msa0754840:intron 40.0%
TTTGTAAGGCCAAGCTCAAT+CGG - chr5_2:8542812-8542831 Msa0754840:intron 40.0%
ATCGGCAATACCGATATTGT+AGG - chr5_2:8542830-8542849 Msa0754840:intron 40.0%
GAAAAAAAGTCAAGCAGGAG+TGG + chr5_2:8543197-8543216 None:intergenic 40.0%
ATCAATAAGGCCTTAGTGGT+TGG + chr5_2:8543265-8543284 None:intergenic 40.0%
GGATATCAATAAGGCCTTAG+TGG + chr5_2:8543269-8543288 None:intergenic 40.0%
! AATGGGCTCGGATATCAATA+AGG + chr5_2:8543278-8543297 None:intergenic 40.0%
CATTGGGCATGTTTGTGAAA+TGG + chr5_2:8543296-8543315 None:intergenic 40.0%
!!! GTTTTGAGGTGGTTGAACAT+TGG + chr5_2:8543313-8543332 None:intergenic 40.0%
AAAGTTTATCCGAACGGTAC+CGG - chr5_2:8543461-8543480 Msa0754840:intron 40.0%
!! GAACGGTACCGGATATATTT+TGG - chr5_2:8543472-8543491 Msa0754840:intron 40.0%
! TCCACTACCACTAGTTTATG+TGG - chr5_2:8543560-8543579 Msa0754840:intron 40.0%
TGTGTTGTGTGTTCAGCTTT+GGG + chr5_2:8543586-8543605 None:intergenic 40.0%
TGATTGTAGCTACTAGCTAC+AGG + chr5_2:8543636-8543655 None:intergenic 40.0%
CCAATTCTGGTATGACAAGT+TGG + chr5_2:8543723-8543742 None:intergenic 40.0%
CCAACTTGTCATACCAGAAT+TGG - chr5_2:8543720-8543739 Msa0754840:intron 40.0%
CTAGAGTTGAAACCTGTGAA+GGG + chr5_2:8538768-8538787 None:intergenic 40.0%
TTGTGTTGAATTCTCAGGCT+TGG - chr5_2:8543918-8543937 Msa0754840:intron 40.0%
!! TCACTCACCCTTTTCAAGAA+TGG - chr5_2:8543993-8544012 Msa0754840:intron 40.0%
!! CACTCACCCTTTTCAAGAAT+GGG - chr5_2:8543994-8544013 Msa0754840:intron 40.0%
ACTCCACCCATTCTTGAAAA+GGG + chr5_2:8544003-8544022 None:intergenic 40.0%
TATATTAGCTGAGCTTGAGC+TGG - chr5_2:8544139-8544158 Msa0754840:CDS 40.0%
! CTCGTGTTGGTATCAAACAT+TGG + chr5_2:8544314-8544333 None:intergenic 40.0%
AGGTCCATCCTACCAAAAAA+AGG - chr5_2:8544389-8544408 Msa0754840:intron 40.0%
!!! TGGACCTTTTTTTGGTAGGA+TGG + chr5_2:8544396-8544415 None:intergenic 40.0%
!!! TGGATGGACCTTTTTTTGGT+AGG + chr5_2:8544400-8544419 None:intergenic 40.0%
AAAATGATGCATGGACATCG+GGG + chr5_2:8544576-8544595 None:intergenic 40.0%
!!! GAGGGTACTTTTGGAAACTT+TGG - chr5_2:8544716-8544735 Msa0754840:intron 40.0%
GATTGAACCAAGTCCAAATG+GGG - chr5_2:8540066-8540085 Msa0754840:intron 40.0%
TCCAAATGGGGATACCTTAT+TGG - chr5_2:8544800-8544819 Msa0754840:intron 40.0%
! TCCAATAAGGTATCCCCATT+TGG + chr5_2:8544804-8544823 None:intergenic 40.0%
CCCATCCAAGAATTCCAATA+AGG + chr5_2:8544817-8544836 None:intergenic 40.0%
TGGGTCTAAACTAGTTGCAA+AGG - chr5_2:8544833-8544852 Msa0754840:intron 40.0%
AATCCCATCCACTTAGCTAT+CGG + chr5_2:8540450-8540469 None:intergenic 40.0%
GCACAATGACCAACAAACTT+TGG + chr5_2:8545195-8545214 None:intergenic 40.0%
!!! ATGGACAACCTTTTGAAGCA+CGG - chr5_2:8545241-8545260 Msa0754840:intron 40.0%
TAATTCACCCGTGCTTCAAA+AGG + chr5_2:8545252-8545271 None:intergenic 40.0%
TAGACTTTGGTTGGAGAAAC+AGG + chr5_2:8545309-8545328 None:intergenic 40.0%
TTTCTCCAACCAAAGTCTAC+TGG - chr5_2:8545310-8545329 Msa0754840:intron 40.0%
GCAGATAAACCAGTAGACTT+TGG + chr5_2:8545322-8545341 None:intergenic 40.0%
TCCTAAAATAACCGAGCCAT+CGG - chr5_2:8545441-8545460 Msa0754840:intron 40.0%
CTAAGGATCTAGTGGAAAAC+TGG - chr5_2:8545479-8545498 Msa0754840:intron 40.0%
GTCCTGATTATAGTGTCATC+CGG + chr5_2:8545538-8545557 None:intergenic 40.0%
! GAAACAGGTGGACTTATTGA+TGG + chr5_2:8545586-8545605 None:intergenic 40.0%
ACCCAATGACTCCAAATCTT+GGG - chr5_2:8545641-8545660 Msa0754840:intron 40.0%
!!! GAAGACGCTTTTAGAGCATA+TGG - chr5_2:8545748-8545767 Msa0754840:intron 40.0%
GAGCATATGGCAATGAAAGA+TGG - chr5_2:8545761-8545780 Msa0754840:intron 40.0%
ATGGTTAGTGGAAATATGCG+CGG + chr5_2:8545787-8545806 None:intergenic 40.0%
ATACCTAAGCTAGTAAGGCT+TGG - chr5_2:8545880-8545899 Msa0754840:intron 40.0%
AAATTAGTGTGCTCCAGCAA+TGG + chr5_2:8541988-8542007 None:intergenic 40.0%
ATTCAGGTATACATAGGGTG+GGG + chr5_2:8546043-8546062 None:intergenic 40.0%
GAGTCTATAACGTTGAGTGG+TGG + chr5_2:8538536-8538555 None:intergenic 45.0%
GTACGACAAGGCAATGATGT+AGG + chr5_2:8538629-8538648 None:intergenic 45.0%
TTGCCTTGTCGTACCAGAAT+TGG - chr5_2:8538635-8538654 Msa0754840:three_prime_UTR 45.0%
GATCCAATTCTGGTACGACA+AGG + chr5_2:8538641-8538660 None:intergenic 45.0%
GAACATGTTGTAATCGTGGG+TGG - chr5_2:8538713-8538732 Msa0754840:CDS 45.0%
TCCTCATATTAGCCGTGATC+CGG + chr5_2:8538921-8538940 None:intergenic 45.0%
!! GAATTTCCAGGCTTGGTGTT+CGG - chr5_2:8538988-8539007 Msa0754840:CDS 45.0%
CAGTCAGAGTCACTTAGAAC+TGG - chr5_2:8539026-8539045 Msa0754840:CDS 45.0%
TCAGAGTCACTTAGAACTGG+TGG - chr5_2:8539029-8539048 Msa0754840:CDS 45.0%
TCACCCTTTCCAAAAATGGG+TGG - chr5_2:8539060-8539079 Msa0754840:CDS 45.0%
!! CCTCCACCCATTTTTGGAAA+GGG + chr5_2:8539066-8539085 None:intergenic 45.0%
CCTTTCCAAAAATGGGTGGA+GGG - chr5_2:8539064-8539083 Msa0754840:CDS 45.0%
!! TGGAGGGCACTTGATTCAAT+TGG - chr5_2:8539080-8539099 Msa0754840:CDS 45.0%
TATATCAGCTGAGCTTGAGC+TGG - chr5_2:8539198-8539217 Msa0754840:CDS 45.0%
GAAACTGAGACTAAGTCGTC+GGG - chr5_2:8539410-8539429 Msa0754840:CDS 45.0%
TGGACAAGACCTCGAAAATG+TGG - chr5_2:8539661-8539680 Msa0754840:intron 45.0%
GAAACATTAGCACGCCACAT+AGG - chr5_2:8539693-8539712 Msa0754840:intron 45.0%
GCATACATTCGACTCCTATG+TGG + chr5_2:8539710-8539729 None:intergenic 45.0%
GAGTCGAATGTATGCCATGT+TGG - chr5_2:8539715-8539734 Msa0754840:intron 45.0%
TCGAATGTATGCCATGTTGG+AGG - chr5_2:8539718-8539737 Msa0754840:intron 45.0%
GGTATGTTAGACCTCCAACA+TGG + chr5_2:8539732-8539751 None:intergenic 45.0%
AGCCCCTAGTTAAGGCTAAA+GGG + chr5_2:8539753-8539772 None:intergenic 45.0%
TAGCCCCTAGTTAAGGCTAA+AGG + chr5_2:8539754-8539773 None:intergenic 45.0%
ATTGCTTGAGAATCAAGGCC+AGG - chr5_2:8539801-8539820 Msa0754840:intron 45.0%
TTGCTTGAGAATCAAGGCCA+GGG - chr5_2:8539802-8539821 Msa0754840:intron 45.0%
! AAGGCGTCTTCATAGGTTGA+GGG + chr5_2:8539845-8539864 None:intergenic 45.0%
!! AAAGGCGTCTTCATAGGTTG+AGG + chr5_2:8539846-8539865 None:intergenic 45.0%
!!! GAGGGTACTTTTGGAAACCT+TGG - chr5_2:8539994-8540013 Msa0754840:intron 45.0%
!! GTACTTTTGGAAACCTTGGC+TGG - chr5_2:8539998-8540017 Msa0754840:intron 45.0%
! AAGGTATCCCCATTTGGACT+TGG + chr5_2:8540076-8540095 None:intergenic 45.0%
TCCAAATGGGGATACCTTCT+TGG - chr5_2:8540078-8540097 Msa0754840:intron 45.0%
!! TCCAAGAAGGTATCCCCATT+TGG + chr5_2:8540082-8540101 None:intergenic 45.0%
CCCATCCAAGAATTCCAAGA+AGG + chr5_2:8540095-8540114 None:intergenic 45.0%
AATGGCCAATCTTGAAGCTC+TGG - chr5_2:8540354-8540373 Msa0754840:intron 45.0%
TAGGACCAGAGCTTCAAGAT+TGG + chr5_2:8540362-8540381 None:intergenic 45.0%
CAGATTGTAATAGGGTGCGA+CGG - chr5_2:8540414-8540433 Msa0754840:intron 45.0%
GTTGGTTATTGTGCTTTCCG+TGG - chr5_2:8540486-8540505 Msa0754840:intron 45.0%
TATGGAAAAGGGTTACGTGC+AGG - chr5_2:8540561-8540580 Msa0754840:intron 45.0%
GGTGCTAAAGAAGCAAGCTA+AGG - chr5_2:8540750-8540769 Msa0754840:intron 45.0%
! TCTAGTAGAAAACTGGCCTC+CGG - chr5_2:8540774-8540793 Msa0754840:intron 45.0%
! TGACTCCATTGATGGATCGA+TGG - chr5_2:8540842-8540861 Msa0754840:CDS 45.0%
CAAAGCCATCGATCCATCAA+TGG + chr5_2:8540850-8540869 None:intergenic 45.0%
! CATTGATGGATCGATGGCTT+TGG - chr5_2:8540848-8540867 Msa0754840:CDS 45.0%
! ACTCTACCTCTAGAAACAGG+TGG + chr5_2:8540886-8540905 None:intergenic 45.0%
AGAGGTAGAGTTGTACTCGT+TGG - chr5_2:8540895-8540914 Msa0754840:CDS 45.0%
! TGCCCAAGATTTGGAGTCAT+TGG + chr5_2:8540934-8540953 None:intergenic 45.0%
ATGACTCCAAATCTTGGGCA+AGG - chr5_2:8540934-8540953 Msa0754840:CDS 45.0%
AACCATACTGGCAAACCTTG+TGG - chr5_2:8541089-8541108 Msa0754840:intron 45.0%
ACCATACTGGCAAACCTTGT+GGG - chr5_2:8541090-8541109 Msa0754840:intron 45.0%
TCCTAACATAACACACCAGC+GGG + chr5_2:8541137-8541156 None:intergenic 45.0%
ATACCTAAGCTAGCAAGGCT+TGG - chr5_2:8541961-8541980 Msa0754840:intron 45.0%
GCGGTTATGCACATCTTTCA+TGG - chr5_2:8542300-8542319 Msa0754840:intron 45.0%
TGAGGAAAGGATCCCTCTTA+CGG - chr5_2:8542428-8542447 Msa0754840:intron 45.0%
TGACTCGTTCTTGAAACGCA+TGG - chr5_2:8543230-8543249 Msa0754840:intron 45.0%
GACTCGTTCTTGAAACGCAT+GGG - chr5_2:8543231-8543250 Msa0754840:intron 45.0%
! GCATGTTTGTGAAATGGGCT+CGG + chr5_2:8543290-8543309 None:intergenic 45.0%
GCCACATAAACTAGTGGTAG+TGG + chr5_2:8543564-8543583 None:intergenic 45.0%
CTTTGGGCCACATAAACTAG+TGG + chr5_2:8543570-8543589 None:intergenic 45.0%
GTGTGTTGTGTGTTCAGCTT+TGG + chr5_2:8543587-8543606 None:intergenic 45.0%
CTACAGGTATTACCGTTGAG+TGG + chr5_2:8543620-8543639 None:intergenic 45.0%
! ACTTCTGAGAGCTCCAATTC+TGG + chr5_2:8543736-8543755 None:intergenic 45.0%
GGCTCAATCTTCAGTCCAAA+AGG - chr5_2:8543770-8543789 Msa0754840:intron 45.0%
GAACATGTTGTAATCGTGGG+TGG - chr5_2:8538713-8538732 Msa0754840:CDS 45.0%
GCTAGAGTTGAAACCTGTGA+AGG + chr5_2:8543848-8543867 None:intergenic 45.0%
CCTGAGAATTCAACACAAGC+AGG + chr5_2:8543916-8543935 None:intergenic 45.0%
CCTGCTTGTGTTGAATTCTC+AGG - chr5_2:8543913-8543932 Msa0754840:intron 45.0%
!! GAATTCTCAGGCTTGGTGTT+CGG - chr5_2:8543925-8543944 Msa0754840:intron 45.0%
!! TCACCCTTTTCAAGAATGGG+TGG - chr5_2:8543997-8544016 Msa0754840:intron 45.0%
CACTCCACCCATTCTTGAAA+AGG + chr5_2:8544004-8544023 None:intergenic 45.0%
ATATCAGCTGTACAGGATGG+TGG - chr5_2:8544168-8544187 Msa0754840:CDS 45.0%
TCAGTGTCATGTACTCGTGT+TGG + chr5_2:8544327-8544346 None:intergenic 45.0%
!! AGTTTTGCCACTGGCCTATT+TGG + chr5_2:8544506-8544525 None:intergenic 45.0%
! AAGGTATCCCCATTTGGACT+TGG + chr5_2:8540076-8540095 None:intergenic 45.0%
CAGATTGTAATAGGGTGCGA+CGG - chr5_2:8540414-8540433 Msa0754840:intron 45.0%
TTCGATCACCGATAGCTAAG+TGG - chr5_2:8545154-8545173 Msa0754840:intron 45.0%
ATCACCGATAGCTAAGTGGA+TGG - chr5_2:8545158-8545177 Msa0754840:intron 45.0%
TCACCGATAGCTAAGTGGAT+GGG - chr5_2:8545159-8545178 Msa0754840:intron 45.0%
AGGTTGTCCATCTGAATAGG+AGG + chr5_2:8545232-8545251 None:intergenic 45.0%
!!! TGGACAACCTTTTGAAGCAC+GGG - chr5_2:8545242-8545261 Msa0754840:intron 45.0%
GCACGGGTGAATTACATCTA+CGG - chr5_2:8545258-8545277 Msa0754840:intron 45.0%
TGCTTCAACAGTTCATCTCC+AGG - chr5_2:8545339-8545358 Msa0754840:intron 45.0%
!!! ACCGATGGCTCGGTTATTTT+AGG + chr5_2:8545445-8545464 None:intergenic 45.0%
GGTGCTAAAGAAGCAAGCTA+AGG - chr5_2:8540750-8540769 Msa0754840:intron 45.0%
GAAGCAAGCTAAGGATCTAG+TGG - chr5_2:8540759-8540778 Msa0754840:intron 45.0%
CACCGGATGACACTATAATC+AGG - chr5_2:8545533-8545552 Msa0754840:CDS 45.0%
CACTATAATCAGGACTCCGT+TGG - chr5_2:8545543-8545562 Msa0754840:CDS 45.0%
TATAATCAGGACTCCGTTGG+TGG - chr5_2:8545546-8545565 Msa0754840:CDS 45.0%
!! ATAAGTCCACCTGTTTCTGC+AGG - chr5_2:8545589-8545608 Msa0754840:CDS 45.0%
ACAACTCTACCTGCAGAAAC+AGG + chr5_2:8545601-8545620 None:intergenic 45.0%
CACCCAATGACTCCAAATCT+TGG - chr5_2:8545640-8545659 Msa0754840:intron 45.0%
! GCCCAAGATTTGGAGTCATT+GGG + chr5_2:8540933-8540952 None:intergenic 45.0%
! TGCCCAAGATTTGGAGTCAT+TGG + chr5_2:8540934-8540953 None:intergenic 45.0%
ATGACTCCAAATCTTGGGCA+AGG - chr5_2:8540934-8540953 Msa0754840:CDS 45.0%
ATGTTTGCCCGTATGGTTAG+TGG + chr5_2:8545799-8545818 None:intergenic 45.0%
AACCATACGGGCAAACATTG+TGG - chr5_2:8545801-8545820 Msa0754840:intron 45.0%
ACCATACGGGCAAACATTGT+GGG - chr5_2:8545802-8545821 Msa0754840:intron 45.0%
TTCCTAACAGAACACACCAG+CGG + chr5_2:8545850-8545869 None:intergenic 45.0%
CATGTTGTAATCGTGGGTGG+TGG - chr5_2:8538716-8538735 Msa0754840:CDS 50.0%
GAAGGGATAGAGCAGTTGCA+AGG + chr5_2:8538751-8538770 None:intergenic 50.0%
CAACTGCTCTATCCCTTCAC+AGG - chr5_2:8538753-8538772 Msa0754840:CDS 50.0%
TATTAGCCGTGATCCGGTGT+TGG + chr5_2:8538915-8538934 None:intergenic 50.0%
ACCGGATCACGGCTAATATG+AGG - chr5_2:8538917-8538936 Msa0754840:CDS 50.0%
CCCTTTCCAAAAATGGGTGG+AGG - chr5_2:8539063-8539082 Msa0754840:CDS 50.0%
!! CCCTCCACCCATTTTTGGAA+AGG + chr5_2:8539067-8539086 None:intergenic 50.0%
! AAGTGCCCTCCACCCATTTT+TGG + chr5_2:8539072-8539091 None:intergenic 50.0%
! GAGCTCAAGCCACATTTTCG+AGG + chr5_2:8539673-8539692 None:intergenic 50.0%
GGAACAGTAGCCCCTAGTTA+AGG + chr5_2:8539761-8539780 None:intergenic 50.0%
!!! AGTGGAGAGGAGGGTACTTT+TGG - chr5_2:8539985-8540004 Msa0754840:intron 50.0%
TTCGATCGCCGATAGCTAAG+TGG - chr5_2:8540439-8540458 Msa0754840:intron 50.0%
ATCGCCGATAGCTAAGTGGA+TGG - chr5_2:8540443-8540462 Msa0754840:intron 50.0%
TCGCCGATAGCTAAGTGGAT+GGG - chr5_2:8540444-8540463 Msa0754840:intron 50.0%
CTGAATAGGAGGCAAGTCCA+CGG + chr5_2:8540506-8540525 None:intergenic 50.0%
GGACTTGCCTCCTATTCAGA+TGG - chr5_2:8540507-8540526 Msa0754840:intron 50.0%
AGGCTGTCCATCTGAATAGG+AGG + chr5_2:8540517-8540536 None:intergenic 50.0%
! TGGACAGCCTTTTCAACCAC+AGG - chr5_2:8540527-8540546 Msa0754840:intron 50.0%
TCCTCAAACAACCGAGCCAT+CGG - chr5_2:8540729-8540748 Msa0754840:intron 50.0%
!! CTTCTTTAGCACCGATGGCT+CGG + chr5_2:8540743-8540762 None:intergenic 50.0%
! GCTTGCTTCTTTAGCACCGA+TGG + chr5_2:8540748-8540767 None:intergenic 50.0%
TTGTACTCGTTGGAGACGCT+TGG - chr5_2:8540905-8540924 Msa0754840:CDS 50.0%
CAAGCTCCTTGCCCAAGATT+TGG + chr5_2:8540943-8540962 None:intergenic 50.0%
!! AGGAGCTTGTTGTGCTCTTG+AGG - chr5_2:8540954-8540973 Msa0754840:CDS 50.0%
TTGTGCTCTTGAGGATGCAG+TGG - chr5_2:8540963-8540982 Msa0754840:CDS 50.0%
ACCCACAAGGTTTGCCAGTA+TGG + chr5_2:8541094-8541113 None:intergenic 50.0%
ACTGCGAAATCGAACCCACA+AGG + chr5_2:8541107-8541126 None:intergenic 50.0%
TTGTGGGTTCGATTTCGCAG+TGG - chr5_2:8541106-8541125 Msa0754840:intron 50.0%
TGTGGGTTCGATTTCGCAGT+GGG - chr5_2:8541107-8541126 Msa0754840:intron 50.0%
ACCCGCTGGTGTGTTATGTT+AGG - chr5_2:8541133-8541152 Msa0754840:intron 50.0%
ATATTGTCAGGGACAGAGCG+AGG - chr5_2:8541160-8541179 Msa0754840:intron 50.0%
! TCGGTATTGCCGATTGAGCT+TGG + chr5_2:8542824-8542843 None:intergenic 50.0%
! ATTTTCCCGGCAAATGCCCA+TGG - chr5_2:8543171-8543190 Msa0754840:intron 50.0%
! GGCCTTTTCACCAACCACTA+AGG - chr5_2:8543252-8543271 Msa0754840:intron 50.0%
!! GGCCTTAGTGGTTGGTGAAA+AGG + chr5_2:8543257-8543276 None:intergenic 50.0%
CACTCAAGTGTGCTCCAGAA+AGG + chr5_2:8543375-8543394 None:intergenic 50.0%
ACAATCTCGCCACCACTCAA+CGG - chr5_2:8543605-8543624 Msa0754840:intron 50.0%
CAGGTATTACCGTTGAGTGG+TGG + chr5_2:8543617-8543636 None:intergenic 50.0%
AGACGAGGTTGTTGTAGCCA+TGG + chr5_2:8543682-8543701 None:intergenic 50.0%
CATGTTGTAATCGTGGGTGG+TGG - chr5_2:8538716-8538735 Msa0754840:CDS 50.0%
GAAGGGATAGAGCAGTTGCA+AGG + chr5_2:8538751-8538770 None:intergenic 50.0%
CAACTGCTCTATCCCTTCAC+AGG - chr5_2:8538753-8538772 Msa0754840:CDS 50.0%
CAGTCAGAGTCACTTCGAAC+AGG - chr5_2:8543963-8543982 Msa0754840:intron 50.0%
TCAGAGTCACTTCGAACAGG+TGG - chr5_2:8543966-8543985 Msa0754840:intron 50.0%
! ATGGTGGTGAAGTCTGAGGA+TGG - chr5_2:8544184-8544203 Msa0754840:CDS 50.0%
! TTGCCACTGGCCTATTTGGT+AGG + chr5_2:8544502-8544521 None:intergenic 50.0%
ACGGATATTGTGCAGCCAAG+AGG - chr5_2:8544677-8544696 Msa0754840:intron 50.0%
!!! AGTGGAGAGGAGGGTACTTT+TGG - chr5_2:8539985-8540004 Msa0754840:intron 50.0%
CAGGGCCATAACCAATCATG+TGG + chr5_2:8545016-8545035 None:intergenic 50.0%
GTTGGTCATTGTGCTTTCCG+TGG - chr5_2:8545201-8545220 Msa0754840:intron 50.0%
CTGAATAGGAGGCAAGTCCA+CGG + chr5_2:8540506-8540525 None:intergenic 50.0%
GGACTTGCCTCCTATTCAGA+TGG - chr5_2:8540507-8540526 Msa0754840:intron 50.0%
!! CTTCTTTAGCACCGATGGCT+CGG + chr5_2:8540743-8540762 None:intergenic 50.0%
! GCTTGCTTCTTTAGCACCGA+TGG + chr5_2:8540748-8540767 None:intergenic 50.0%
CAAAGCCATCGATCCACCAA+CGG + chr5_2:8545562-8545581 None:intergenic 50.0%
ACTCTACCTGCAGAAACAGG+TGG + chr5_2:8545598-8545617 None:intergenic 50.0%
GCAGGTAGAGTTGTACTCGT+TGG - chr5_2:8545607-8545626 Msa0754840:intron 50.0%
TTGTACTCGTTGGAGACGCT+TGG - chr5_2:8540905-8540924 Msa0754840:CDS 50.0%
CATGCTCCTTGCCCAAGATT+TGG + chr5_2:8545655-8545674 None:intergenic 50.0%
! AGGAGCATGTTGTGCTCTTG+AGG - chr5_2:8545666-8545685 Msa0754840:intron 50.0%
TTGTGCTCTTGAGGATGCAG+TGG - chr5_2:8540963-8540982 Msa0754840:CDS 50.0%
ACCCACAATGTTTGCCCGTA+TGG + chr5_2:8545806-8545825 None:intergenic 50.0%
ACGGGCAAACATTGTGGGTT+CGG - chr5_2:8545807-8545826 Msa0754840:intron 50.0%
TCCTAACAGAACACACCAGC+GGG + chr5_2:8545849-8545868 None:intergenic 50.0%
! GGACCAAGCCTTACTAGCTT+AGG + chr5_2:8545886-8545905 None:intergenic 50.0%
! AGTAAGGCTTGGTCCATTGC+TGG - chr5_2:8545891-8545910 Msa0754840:CDS 50.0%
CCACGATACGTGTCCAACAC+CGG - chr5_2:8538899-8538918 Msa0754840:CDS 55.0%
ACGTGTCCAACACCGGATCA+CGG - chr5_2:8538906-8538925 Msa0754840:CDS 55.0%
CAAAGACCGAACACCAAGCC+TGG + chr5_2:8538997-8539016 None:intergenic 55.0%
!! CAGGCTTGGTGTTCGGTCTT+TGG - chr5_2:8538995-8539014 Msa0754840:CDS 55.0%
! TGGTGTTCGGTCTTTGGTGC+TGG - chr5_2:8539001-8539020 Msa0754840:CDS 55.0%
ACTGAGACTAAGTCGTCGGG+TGG - chr5_2:8539413-8539432 Msa0754840:CDS 55.0%
TGGGCTATTGTGCAGCCAAG+AGG - chr5_2:8539955-8539974 Msa0754840:intron 55.0%
! CTTGGCTGGTCAACTACCTC+CGG - chr5_2:8540012-8540031 Msa0754840:intron 55.0%
!! ACCGATGGCTCGGTTGTTTG+AGG + chr5_2:8540733-8540752 None:intergenic 55.0%
!! CTAAGTGCCTAGCTCTGCGA+GGG - chr5_2:8541836-8541855 Msa0754840:intron 55.0%
!! TAAGTGCCTAGCTCTGCGAG+GGG - chr5_2:8541837-8541856 Msa0754840:intron 55.0%
! GGACCAAGCCTTGCTAGCTT+AGG + chr5_2:8541967-8541986 None:intergenic 55.0%
! AGCAAGGCTTGGTCCATTGC+TGG - chr5_2:8541972-8541991 Msa0754840:intron 55.0%
AGTCAAGCAGGAGTGGCCAT+GGG + chr5_2:8543190-8543209 None:intergenic 55.0%
AAGTCAAGCAGGAGTGGCCA+TGG + chr5_2:8543191-8543210 None:intergenic 55.0%
TGGTGTTCGGTCTCTTGTGC+TGG - chr5_2:8543938-8543957 Msa0754840:intron 55.0%
! CAGGATGGTGGTGAAGTCTG+AGG - chr5_2:8544180-8544199 Msa0754840:CDS 55.0%
! CCACTGGCCTATTTGGTAGG+AGG + chr5_2:8544499-8544518 None:intergenic 55.0%
CCTCCTACCAAATAGGCCAG+TGG - chr5_2:8544496-8544515 Msa0754840:intron 55.0%
! ATGGGTGCGAGTTTTGCCAC+TGG + chr5_2:8544515-8544534 None:intergenic 55.0%
ATGCATGGACATCGGGGAGT+GGG + chr5_2:8544570-8544589 None:intergenic 55.0%
TACGGAAAAGGGTTACGCGC+AGG - chr5_2:8545276-8545295 Msa0754840:intron 55.0%
! CGTTGGTGGATCGATGGCTT+TGG - chr5_2:8545560-8545579 Msa0754840:CDS 55.0%
TTGTGGGTTCGGCTTTGCAG+TGG - chr5_2:8545818-8545837 Msa0754840:intron 55.0%
TGTGGGTTCGGCTTTGCAGT+GGG - chr5_2:8545819-8545838 Msa0754840:intron 55.0%
ACCCGCTGGTGTGTTCTGTT+AGG - chr5_2:8545845-8545864 Msa0754840:intron 55.0%
! ATCGTGGGTGGTGGCATAGC+AGG - chr5_2:8538725-8538744 Msa0754840:CDS 60.0%
! CCGGTGTTGGACACGTATCG+TGG + chr5_2:8538902-8538921 None:intergenic 60.0%
TCTCCACTGCACGCACCTCT+TGG + chr5_2:8539973-8539992 None:intergenic 60.0%
! AAGAGGTGCGTGCAGTGGAG+AGG - chr5_2:8539972-8539991 Msa0754840:intron 60.0%
CGGAGGTAGTTGACCAGCCA+AGG + chr5_2:8540014-8540033 None:intergenic 60.0%
CCTCGCAGAGCTAGGCACTT+AGG + chr5_2:8541838-8541857 None:intergenic 60.0%
!! CCTAAGTGCCTAGCTCTGCG+AGG - chr5_2:8541835-8541854 Msa0754840:intron 60.0%
AGGGGAACTCGCCATCCCAA+AGG + chr5_2:8541904-8541923 None:intergenic 60.0%
AGTGGCCATGGGCATTTGCC+GGG + chr5_2:8543179-8543198 None:intergenic 60.0%
GAGTGGCCATGGGCATTTGC+CGG + chr5_2:8543180-8543199 None:intergenic 60.0%
! ATCGTGGGTGGTGGCATTGC+AGG - chr5_2:8543804-8543823 Msa0754840:intron 60.0%
GATGCATGGACATCGGGGAG+TGG + chr5_2:8544571-8544590 None:intergenic 60.0%
TCTCCACTGCACGCACCTCT+TGG + chr5_2:8539973-8539992 None:intergenic 60.0%
! AAGAGGTGCGTGCAGTGGAG+AGG - chr5_2:8539972-8539991 Msa0754840:intron 60.0%
! GGACTCCGTTGGTGGATCGA+TGG - chr5_2:8545554-8545573 Msa0754840:CDS 60.0%
TTTGCAGTGGGACAACCCGC+TGG - chr5_2:8545831-8545850 Msa0754840:intron 60.0%
! CAGCCAAGAGGTGCGTGCAG+TGG - chr5_2:8539967-8539986 Msa0754840:intron 65.0%
AGGTGCGTGCAGTGGAGAGG+AGG - chr5_2:8539975-8539994 Msa0754840:intron 65.0%
GGTGCGTGCAGTGGAGAGGA+GGG - chr5_2:8539976-8539995 Msa0754840:intron 65.0%
TTCGCAGTGGGACAACCCGC+TGG - chr5_2:8541119-8541138 Msa0754840:intron 65.0%
TATCCGCCCCTCGCAGAGCT+AGG + chr5_2:8541846-8541865 None:intergenic 65.0%
! CAGCCAAGAGGTGCGTGCAG+TGG - chr5_2:8539967-8539986 Msa0754840:intron 65.0%
AGGTGCGTGCAGTGGAGAGG+AGG - chr5_2:8539975-8539994 Msa0754840:intron 65.0%
GGTGCGTGCAGTGGAGAGGA+GGG - chr5_2:8539976-8539995 Msa0754840:intron 65.0%
!! GTGCCTAGCTCTGCGAGGGG+CGG - chr5_2:8541840-8541859 Msa0754840:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 8538510 8546154 8538510 ID=Msa0754840;Name=Msa0754840
chr5_2 mRNA 8538510 8546154 8538510 ID=Msa0754840-mRNA-1;Parent=Msa0754840;Name=Msa0754840-mRNA-1;_AED=0.29;_eAED=0.29;_QI=74|0.44|0.6|1|0.77|0.8|10|203|671
chr5_2 exon 8538510 8539224 8538510 ID=Msa0754840-mRNA-1:exon:3912;Parent=Msa0754840-mRNA-1
chr5_2 exon 8539304 8539532 8539304 ID=Msa0754840-mRNA-1:exon:3911;Parent=Msa0754840-mRNA-1
chr5_2 exon 8539810 8539972 8539810 ID=Msa0754840-mRNA-1:exon:3910;Parent=Msa0754840-mRNA-1
chr5_2 exon 8540583 8540729 8540583 ID=Msa0754840-mRNA-1:exon:3909;Parent=Msa0754840-mRNA-1
chr5_2 exon 8540811 8541024 8540811 ID=Msa0754840-mRNA-1:exon:3908;Parent=Msa0754840-mRNA-1
chr5_2 exon 8544019 8544247 8544019 ID=Msa0754840-mRNA-1:exon:3907;Parent=Msa0754840-mRNA-1
chr5_2 exon 8544532 8544694 8544532 ID=Msa0754840-mRNA-1:exon:3906;Parent=Msa0754840-mRNA-1
chr5_2 exon 8545357 8545422 8545357 ID=Msa0754840-mRNA-1:exon:3905;Parent=Msa0754840-mRNA-1
chr5_2 exon 8545520 8545621 8545520 ID=Msa0754840-mRNA-1:exon:3904;Parent=Msa0754840-mRNA-1
chr5_2 exon 8545890 8546154 8545890 ID=Msa0754840-mRNA-1:exon:3903;Parent=Msa0754840-mRNA-1
chr5_2 five_prime_UTR 8546081 8546154 8546081 ID=Msa0754840-mRNA-1:five_prime_utr;Parent=Msa0754840-mRNA-1
chr5_2 CDS 8545890 8546080 8545890 ID=Msa0754840-mRNA-1:cds;Parent=Msa0754840-mRNA-1
chr5_2 CDS 8545520 8545621 8545520 ID=Msa0754840-mRNA-1:cds;Parent=Msa0754840-mRNA-1
chr5_2 CDS 8545357 8545422 8545357 ID=Msa0754840-mRNA-1:cds;Parent=Msa0754840-mRNA-1
chr5_2 CDS 8544532 8544694 8544532 ID=Msa0754840-mRNA-1:cds;Parent=Msa0754840-mRNA-1
chr5_2 CDS 8544019 8544247 8544019 ID=Msa0754840-mRNA-1:cds;Parent=Msa0754840-mRNA-1
chr5_2 CDS 8540811 8541024 8540811 ID=Msa0754840-mRNA-1:cds;Parent=Msa0754840-mRNA-1
chr5_2 CDS 8540583 8540729 8540583 ID=Msa0754840-mRNA-1:cds;Parent=Msa0754840-mRNA-1
chr5_2 CDS 8539810 8539972 8539810 ID=Msa0754840-mRNA-1:cds;Parent=Msa0754840-mRNA-1
chr5_2 CDS 8539304 8539532 8539304 ID=Msa0754840-mRNA-1:cds;Parent=Msa0754840-mRNA-1
chr5_2 CDS 8538713 8539224 8538713 ID=Msa0754840-mRNA-1:cds;Parent=Msa0754840-mRNA-1
chr5_2 three_prime_UTR 8538510 8538712 8538510 ID=Msa0754840-mRNA-1:three_prime_utr;Parent=Msa0754840-mRNA-1
Gene Sequence

>Msa0754840

ATGACTACAACATTCTCGTCTTTTATGTTTCTTAAACGAATTCCTACATCATTGCCTTGTCGTACCAGAATTGGATCCCTACGATATTCCAAATTAACAATCAAGGCTCAATCTTCTGATGTCCGAAAGGAACATGTTGTAATCGTGGGTGGTGGCATAGCAGGCCTTGCAACTGCTCTATCCCTTCACAGAACTGGTGGAACTTCACTCACCCTTTCCAAAAATGGGTGGAGGGCACTTGATTCAATTGGAGTAGCAAATTGTCTCAGAACTCAATATTTAGAAATTCAAGGGATTGTGTTGAAATCTGAGGATGGAAAAGAACTACGTGCTTTGAATTTCAAAGAAAAGGACGAAAGCCAAGAGGTGCGTGCAGTGGAGAGGAGGGTACTTTTGGAAACCTTGGCTGGTCAACTACCTCCGGATACCATTCAATATTCTTCACGGTTGGTCAAGATTGAACCAAGTCCAAATGGGGATACCTTCTTGGAATTCTTGGATGGGTCTAAAATACTTGCAAAGATTGTAATAGGGTGCGACGGCATTCGATCGCCGATAGCTAAGTGGATGGGATTTTCTGAGCCAAAGTACGTTGGTTATTGTGCTTTCCGTGGACTTGCCTCCTATTCAGATGGACAGCCTTTTCAACCACAGGTGAATTACATCTATGGAAAAGGGTTACGTGCAGGATATGTTCCTGTTTCTCCAACCAAAGTGTATTGGTTTGTCACCTTCAATAGTTCATCTGCAGCTAGTAGCTACAATCAAACACAATCTGAATTGAACATGTCCATGGCTACAACAACCTCGTCTTTTATGATTCTTAAATCTCCAACTTGTCATACCAGAATTGGAGCTCTCAGAAGTTCCAAATTAATCAAGGCTCAATCTTCAGTCCAAAAGGAACATGTTGTAATCGTGGGTGGTGGCATTGCAGGCCTTGCAACTGCTCTATCCCTTCACAGGCTTGGTGTTCGGTCTCTTGTGCTGGAGCAGTCAGAGTCACTTCGAACAGGTGGAACTTCACTCACCCTTTTCAAGAATGGGTGGAGTGTACTTGATTCAATTGGAGTAGCTAATTATCTTAGAACTCAATATTTAGAAATTCAAGGCCAAGAGGTGCGTGCAGTGGAGAGGAGGGTACTTTTGGAAACTTTGGCTGCTCAGTTGCCTCCTGATAGCATTCAATATTCTTCACGGTTGGTCAAGATTGAACCAAGTCCAAATGGGGATACCTTATTGGAATTCTTGGATGGGTCTAAACTAGTTGCAAAGATTGTAATAGGGTGCGACGGAATTCGATCACCGATAGCTAAGTGGATGGGATTTTCTGAGCCAAAGTTTGTTGGTCATTGTGCTTTCCGTGGACTTGCCTCCTATTCAGATGGACAACCTTTTGAAGCACGGGTGAATTACATCTACGGAAAAGGGTTACGCGCAGGATACGTTCCTGTTTCTCCAACCAAAGTCTACTGGTTTATCTGCTTCAACAGTTCATCTCCAGGTCCTAAAATAACCGAGCCATCGGTGCTAAAGAAGCAAGCTAAGGATCTAGTGGAAAACTGGCCTCCAGAGCTACTAAACATAATGAATTCTACACCGGATGACACTATAATCAGGACTCCGTTGGTGGATCGATGGCTTTGGCCATCAATAAGTCCACCTGTTTCTGCAGGTAGAGTTGTACTCGTTGGAGACGCTTGGCACCCAATGACTCCAAATCTTGGGCAAGGAGCATGTTGTGCTCTTGAGGATGCAGTGGTTCTTGCTAAAAAGCTTGCTGCAGCAATCGATTCTGATGATGCTTCTATTGAAGACGCTTTTAGAGCATATGGCAATGAAAGATGGCCGCGCATATTTCCACTAACCATACGGGCAAACATTGTGGGTTCGGCTTTGCAGTGGGACAACCCGCTGGTGTGTTCTGTTAGGAACAATATTGTCATACCTAAGCTAGTAAGGCTTGGTCCATTGCTGGAGCACACTAATTTTATTAGTGAGAGTCTACAAAGATGA
Protein sequence

>Msa0754840

MTTTFSSFMFLKRIPTSLPCRTRIGSLRYSKLTIKAQSSDVRKEHVVIVGGGIAGLATALSLHRTGGTSLTLSKNGWRALDSIGVANCLRTQYLEIQGIVLKSEDGKELRALNFKEKDESQEVRAVERRVLLETLAGQLPPDTIQYSSRLVKIEPSPNGDTFLEFLDGSKILAKIVIGCDGIRSPIAKWMGFSEPKYVGYCAFRGLASYSDGQPFQPQVNYIYGKGLRAGYVPVSPTKVYWFVTFNSSSAASSYNQTQSELNMSMATTTSSFMILKSPTCHTRIGALRSSKLIKAQSSVQKEHVVIVGGGIAGLATALSLHRLGVRSLVLEQSESLRTGGTSLTLFKNGWSVLDSIGVANYLRTQYLEIQGQEVRAVERRVLLETLAAQLPPDSIQYSSRLVKIEPSPNGDTLLEFLDGSKLVAKIVIGCDGIRSPIAKWMGFSEPKFVGHCAFRGLASYSDGQPFEARVNYIYGKGLRAGYVPVSPTKVYWFICFNSSSPGPKITEPSVLKKQAKDLVENWPPELLNIMNSTPDDTIIRTPLVDRWLWPSISPPVSAGRVVLVGDAWHPMTPNLGQGACCALEDAVVLAKKLAAAIDSDDASIEDAFRAYGNERWPRIFPLTIRANIVGSALQWDNPLVCSVRNNIVIPKLVRLGPLLEHTNFISESLQR*