AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0334420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0334420 MtrunA17_Chr2g0317821 93.585 530 33 1 1 529 1 530 0.0 1050
Msa0334420 MtrunA17_Chr2g0317841 90.926 529 48 0 1 529 1 529 0.0 1023
Msa0334420 MtrunA17_Chr4g0074551 50.395 506 243 2 30 527 48 553 0.0 542
Msa0334420 MtrunA17_Chr2g0288071 50.992 504 245 2 3 504 38 541 0.0 541
Msa0334420 MtrunA17_Chr2g0288021 50.800 500 243 2 8 504 9 508 0.0 533
Msa0334420 MtrunA17_Chr4g0074561 50.515 485 234 4 37 515 40 524 0.0 520
Msa0334420 MtrunA17_Chr4g0033311 46.065 521 263 7 1 507 1 517 5.44e-161 468
Msa0334420 MtrunA17_Chr4g0043091 45.875 497 263 5 10 503 8 501 7.57e-156 454
Msa0334420 MtrunA17_Chr4g0042171 47.835 485 234 7 30 503 22 498 2.13e-155 453
Msa0334420 MtrunA17_Chr3g0088441 45.957 507 256 7 8 507 21 516 9.08e-155 452
Msa0334420 MtrunA17_Chr2g0329191 45.756 483 242 5 32 503 34 507 2.59e-154 450
Msa0334420 MtrunA17_Chr6g0482951 45.090 499 257 5 14 504 22 511 3.40e-153 447
Msa0334420 MtrunA17_Chr6g0482081 44.773 507 261 7 10 503 11 511 4.33e-153 447
Msa0334420 MtrunA17_Chr6g0482131 45.979 485 255 6 24 503 28 510 1.07e-152 446
Msa0334420 MtrunA17_Chr6g0482941 45.200 500 266 4 7 504 18 511 1.81e-152 446
Msa0334420 MtrunA17_Chr4g0033191 45.984 498 258 8 17 509 32 523 3.52e-152 446
Msa0334420 MtrunA17_Chr4g0033271 45.833 480 253 6 32 506 35 512 4.87e-152 444
Msa0334420 MtrunA17_Chr2g0329201 44.664 506 258 7 7 503 13 505 1.69e-151 443
Msa0334420 MtrunA17_Chr6g0482071 44.950 505 259 7 12 503 13 511 5.98e-151 442
Msa0334420 MtrunA17_Chr4g0033201 45.749 494 253 8 20 506 28 513 5.36e-150 439
Msa0334420 MtrunA17_Chr3g0090111 45.380 487 253 4 23 508 10 484 1.16e-149 437
Msa0334420 MtrunA17_Chr3g0090131 46.058 482 244 5 30 508 19 487 1.45e-149 437
Msa0334420 MtrunA17_Chr4g0033331 45.114 481 251 6 32 504 39 514 6.08e-148 434
Msa0334420 MtrunA17_Chr3g0087271 44.767 516 264 8 1 503 1 508 1.84e-147 433
Msa0334420 MtrunA17_Chr4g0033321 44.016 493 261 6 32 515 33 519 1.13e-146 431
Msa0334420 MtrunA17_Chr3g0087261 44.444 477 256 5 31 503 36 507 2.41e-146 430
Msa0334420 MtrunA17_Chr4g0033401 45.188 478 255 6 32 504 34 509 3.51e-146 430
Msa0334420 MtrunA17_Chr4g0010501 44.842 475 253 5 32 503 24 492 1.73e-144 424
Msa0334420 MtrunA17_Chr4g0033341 43.444 511 273 8 1 503 39 541 7.09e-143 422
Msa0334420 MtrunA17_Chr7g0242691 43.595 484 258 5 32 512 31 502 1.07e-142 421
Msa0334420 MtrunA17_Chr4g0006971 44.033 486 257 5 30 512 25 498 4.59e-142 419
Msa0334420 MtrunA17_Chr1g0195611 42.157 510 260 8 9 506 4 490 6.40e-141 416
Msa0334420 MtrunA17_Chr7g0242681 43.595 484 257 6 32 512 38 508 6.92e-141 417
Msa0334420 MtrunA17_Chr2g0329321 41.847 509 263 7 1 503 5 486 8.11e-139 410
Msa0334420 MtrunA17_Chr5g0428831 41.897 506 268 9 9 506 4 491 7.00e-136 403
Msa0334420 MtrunA17_Chr4g0033261 44.561 478 232 6 32 503 41 491 6.05e-135 400
Msa0334420 MtrunA17_Chr4g0033231 43.096 478 239 6 32 503 41 491 7.88e-134 397
Msa0334420 MtrunA17_Chr4g0006111 41.616 495 250 8 22 503 55 523 5.11e-131 391
Msa0334420 MtrunA17_Chr5g0430451 43.918 485 232 7 32 503 39 496 6.06e-131 390
Msa0334420 MtrunA17_Chr4g0006131 41.393 488 242 8 31 503 41 499 1.80e-128 384
Msa0334420 MtrunA17_Chr1g0195641 42.051 390 211 6 30 415 25 403 1.32e-107 327
Msa0334420 MtrunA17_Chr5g0418871 51.864 295 140 2 53 346 4 297 2.11e-106 322
Msa0334420 MtrunA17_Chr2g0301231 42.344 418 200 8 99 503 1 390 4.24e-103 315
Msa0334420 MtrunA17_Chr7g0234091 38.446 489 252 9 33 504 76 532 2.56e-97 305
Msa0334420 MtrunA17_Chr7g0234131 38.703 478 267 9 33 504 76 533 5.93e-97 304
Msa0334420 MtrunA17_Chr7g0234111 37.782 487 266 10 33 508 76 536 2.50e-96 302
Msa0334420 MtrunA17_Chr3g0087201 40.719 334 188 5 173 503 16 342 3.24e-85 267
Msa0334420 MtrunA17_Chr7g0230651 39.623 371 197 8 87 451 27 376 3.77e-81 258
Msa0334420 MtrunA17_Chr7g0227561 36.861 274 125 5 34 298 48 282 2.98e-52 179
Msa0334420 MtrunA17_Chr3g0087191 48.521 169 79 3 6 172 2 164 1.43e-50 171
Msa0334420 MtrunA17_Chr7g0236731 41.833 251 136 4 98 347 11 252 2.46e-50 174
Msa0334420 MtrunA17_Chr4g0068871 25.164 457 245 16 95 528 183 565 1.32e-25 110
Msa0334420 MtrunA17_Chr5g0418861 46.591 88 45 2 419 504 4 91 8.23e-22 90.1
Msa0334420 MtrunA17_Chr8g0352881 40.594 101 59 1 248 348 51 150 4.84e-19 84.3
Msa0334420 MtrunA17_Chr2g0288031 55.000 60 27 0 182 241 4 63 7.09e-17 75.1
Msa0334420 MtrunA17_Chr1g0195651 54.717 53 22 1 456 506 1 53 2.39e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0334420 AT4G21760.2 48.532 511 245 5 2 503 20 521 3.47e-178 513
Msa0334420 AT1G61820.1 47.776 517 260 6 3 514 1 512 4.57e-177 509
Msa0334420 AT1G61810.1 47.750 511 261 4 10 514 8 518 2.46e-176 507
Msa0334420 AT4G21760.1 47.945 511 238 6 2 503 20 511 1.31e-173 501
Msa0334420 AT1G61810.3 46.768 526 259 6 10 529 8 518 1.02e-170 494
Msa0334420 AT1G26560.1 46.362 481 253 5 31 507 31 510 1.76e-155 454
Msa0334420 AT3G18080.1 45.588 476 256 2 32 507 39 511 1.22e-151 444
Msa0334420 AT1G02850.2 46.331 477 238 7 33 506 27 488 6.40e-151 441
Msa0334420 AT5G54570.1 46.122 490 244 8 26 503 24 505 1.55e-150 442
Msa0334420 AT2G44480.1 44.885 479 260 4 32 507 35 512 3.14e-150 441
Msa0334420 AT2G44480.3 45.114 481 256 5 32 507 66 543 1.25e-149 440
Msa0334420 AT1G02850.5 44.200 500 238 7 33 506 27 511 2.70e-146 431
Msa0334420 AT5G44640.1 43.615 509 268 8 5 504 4 502 1.58e-145 428
Msa0334420 AT1G61810.5 47.368 418 218 2 99 514 1 418 1.27e-144 422
Msa0334420 AT1G02850.4 44.112 501 238 8 33 506 27 512 1.81e-144 426
Msa0334420 AT3G18070.1 43.644 472 261 3 32 503 30 496 2.81e-144 425
Msa0334420 AT4G27830.1 44.064 497 262 7 15 508 6 489 5.54e-143 422
Msa0334420 AT3G18070.3 43.220 472 257 3 32 503 30 490 1.14e-142 420
Msa0334420 AT2G44450.1 44.148 487 254 7 31 509 30 506 6.29e-142 419
Msa0334420 AT1G61810.4 47.971 419 212 4 3 415 1 419 7.96e-142 416
Msa0334420 AT5G42260.1 43.287 499 264 8 10 499 9 497 1.12e-140 416
Msa0334420 AT2G25630.1 43.107 515 256 10 4 509 3 489 5.97e-139 410
Msa0334420 AT4G27820.1 44.628 484 246 9 30 508 21 487 6.52e-138 409
Msa0334420 AT3G60130.1 43.205 493 269 7 26 513 24 510 7.98e-138 409
Msa0334420 AT5G36890.2 43.154 482 254 6 34 509 18 485 2.51e-137 406
Msa0334420 AT5G36890.1 43.154 482 254 6 34 509 18 485 2.62e-137 406
Msa0334420 AT1G02850.1 44.025 477 222 8 33 506 27 461 4.01e-137 405
Msa0334420 AT5G24550.1 44.813 482 258 8 32 506 32 512 2.23e-136 405
Msa0334420 AT4G22100.1 42.231 502 272 8 8 507 1 486 4.77e-135 401
Msa0334420 AT1G47600.1 42.449 490 261 10 20 504 37 510 5.19e-135 401
Msa0334420 AT1G47600.2 42.449 490 260 10 20 504 37 509 6.25e-135 401
Msa0334420 AT3G62750.1 43.665 513 260 12 12 521 4 490 1.56e-134 400
Msa0334420 AT3G62750.2 43.665 513 260 12 12 521 30 516 1.91e-134 400
Msa0334420 AT1G51470.1 42.449 490 261 10 20 504 37 510 7.23e-133 396
Msa0334420 AT1G60090.2 40.990 505 276 8 25 523 17 505 7.95e-132 393
Msa0334420 AT3G60140.1 41.682 535 289 12 1 522 1 525 1.28e-130 392
Msa0334420 AT1G60090.1 40.546 513 274 10 25 523 17 512 2.55e-130 389
Msa0334420 AT1G45191.4 42.032 502 266 9 8 503 1 483 1.43e-129 387
Msa0334420 AT5G24540.1 44.398 482 260 8 32 506 32 512 5.81e-128 384
Msa0334420 AT2G44480.2 44.769 411 224 3 99 507 1 410 1.09e-127 379
Msa0334420 AT1G45191.2 41.188 505 272 9 8 503 1 489 1.81e-127 382
Msa0334420 AT1G45191.6 40.354 508 277 9 8 503 1 494 1.03e-126 380
Msa0334420 AT5G54570.3 44.495 436 224 6 26 451 24 451 3.99e-126 376
Msa0334420 AT1G61820.3 46.277 376 197 3 141 514 1 373 2.79e-125 372
Msa0334420 AT5G54570.2 45.673 416 207 7 99 503 1 408 4.67e-125 373
Msa0334420 AT1G45191.1 39.729 516 281 9 8 503 1 506 6.54e-124 374
Msa0334420 AT3G62740.1 41.061 509 271 12 3 508 1 483 1.71e-123 372
Msa0334420 AT2G44470.3 39.293 509 301 6 1 504 1 506 9.21e-123 372
Msa0334420 AT2G44490.1 39.766 513 300 8 19 523 1 512 1.11e-122 371
Msa0334420 AT3G21370.1 42.769 484 264 11 30 503 31 511 1.51e-121 367
Msa0334420 AT1G02850.3 44.226 407 194 5 33 415 27 424 2.79e-118 356
Msa0334420 AT2G44460.1 40.454 529 296 11 1 520 1 519 4.60e-117 358
Msa0334420 AT3G09260.1 40.825 485 273 11 30 505 33 512 5.67e-117 355
Msa0334420 AT5G28510.1 40.447 492 268 10 30 504 37 520 6.97e-116 353
Msa0334420 AT3G60120.1 40.833 480 276 7 30 503 12 489 1.02e-115 353
Msa0334420 AT4G27830.2 43.099 413 220 6 99 508 1 401 1.36e-115 348
Msa0334420 AT2G32860.2 40.166 483 279 9 31 505 93 573 3.16e-115 354
Msa0334420 AT5G25980.2 40.447 492 276 12 30 512 48 531 3.27e-115 352
Msa0334420 AT3G60130.2 42.217 424 235 6 94 513 41 458 4.96e-114 346
Msa0334420 AT3G62750.4 43.792 443 223 10 12 453 30 447 8.80e-114 345
Msa0334420 AT2G32860.1 40.166 483 278 10 31 505 93 572 1.74e-113 349
Msa0334420 AT1G75940.1 40.361 498 270 11 28 507 33 521 1.89e-113 347
Msa0334420 AT3G03640.1 39.669 484 281 9 34 508 36 517 1.93e-112 344
Msa0334420 AT4G27820.2 43.614 415 216 8 99 508 1 402 4.04e-112 339
Msa0334420 AT4G27820.3 43.614 415 216 8 99 508 1 402 4.04e-112 339
Msa0334420 AT5G26000.1 39.148 493 276 11 36 515 42 523 2.20e-111 342
Msa0334420 AT3G60130.3 41.745 424 226 7 94 513 41 447 4.67e-110 335
Msa0334420 AT1G52400.3 39.876 484 278 10 30 504 37 516 5.53e-110 338
Msa0334420 AT1G52400.1 39.876 484 278 10 30 504 37 516 5.53e-110 338
Msa0334420 AT1G66280.1 38.388 521 292 11 1 503 1 510 1.34e-109 337
Msa0334420 AT1G61810.2 52.577 291 134 2 10 296 8 298 3.12e-109 328
Msa0334420 AT3G62750.6 42.254 426 222 10 99 521 1 405 1.74e-107 327
Msa0334420 AT3G62750.5 42.254 426 222 10 99 521 1 405 1.74e-107 327
Msa0334420 AT5G24540.2 43.160 424 235 6 32 450 32 454 3.30e-106 325
Msa0334420 AT3G62740.2 40.980 449 238 11 3 450 1 423 5.37e-106 324
Msa0334420 AT1G66270.1 38.843 484 281 9 31 505 35 512 1.94e-105 326
Msa0334420 AT3G18070.4 45.706 326 174 2 32 357 30 352 2.09e-105 321
Msa0334420 AT1G66270.2 38.430 484 281 10 31 505 35 510 4.47e-102 317
Msa0334420 AT3G60140.2 42.180 422 227 9 1 415 1 412 1.09e-101 314
Msa0334420 AT1G60270.1 45.833 336 177 3 8 343 1 331 1.53e-101 311
Msa0334420 AT2G44480.4 45.427 328 173 4 28 350 62 388 4.35e-101 310
Msa0334420 AT3G62750.7 46.588 337 166 4 12 348 4 326 8.04e-100 306
Msa0334420 AT3G62750.8 46.588 337 166 4 12 348 4 326 8.04e-100 306
Msa0334420 AT3G62750.3 46.588 337 166 4 12 348 30 352 1.66e-98 305
Msa0334420 AT2G44470.1 37.086 453 279 4 1 450 1 450 1.80e-98 305
Msa0334420 AT1G45191.5 44.083 338 180 3 8 341 1 333 6.64e-98 303
Msa0334420 AT1G45191.3 44.083 338 180 3 8 341 1 333 8.81e-98 302
Msa0334420 AT5G25980.3 39.953 428 243 10 30 451 48 467 4.11e-97 302
Msa0334420 AT5G25980.1 39.953 428 243 10 30 451 48 467 4.11e-97 302
Msa0334420 AT5G26000.2 38.498 426 241 9 36 451 42 456 1.18e-92 290
Msa0334420 AT2G44450.2 40.822 365 200 5 151 509 1 355 1.07e-90 282
Msa0334420 AT1G52400.2 38.318 428 253 8 30 450 37 460 2.47e-89 282
Msa0334420 AT3G18070.2 40.549 328 193 1 176 503 94 419 7.73e-88 277
Msa0334420 AT3G18070.2 50.820 61 30 0 32 92 30 90 1.82e-13 72.8
Msa0334420 AT2G44470.2 41.159 345 197 4 1 342 1 342 1.20e-87 276
Msa0334420 AT3G18070.7 40.000 310 184 1 195 504 1 308 1.64e-81 257
Msa0334420 AT2G44480.5 42.282 298 170 2 211 507 10 306 3.09e-80 253
Msa0334420 AT5G48375.1 36.486 444 210 12 30 469 36 411 3.92e-78 252
Msa0334420 AT2G44460.2 39.474 380 215 9 149 520 1 373 1.82e-75 245
Msa0334420 AT1G51490.1 42.038 314 158 9 41 346 29 326 2.66e-75 244
Msa0334420 AT1G60270.2 44.898 245 134 1 99 343 1 244 6.95e-74 236
Msa0334420 AT3G18070.5 38.750 240 147 0 176 415 94 333 9.90e-58 196
Msa0334420 AT3G18070.5 50.820 61 30 0 32 92 30 90 1.28e-13 72.8
Msa0334420 AT5G16580.1 38.225 293 166 8 170 461 21 299 6.34e-53 182
Msa0334420 AT3G18070.6 38.009 221 137 0 195 415 1 221 1.68e-51 176
Msa0334420 AT3G06510.1 25.822 426 229 15 94 505 159 511 5.47e-24 106
Msa0334420 AT3G06510.2 25.342 438 250 15 94 505 159 545 9.66e-24 105

Find 135 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACATGCTATTTATTATTA+TGG 0.099290 2_4:+52760788 Msa0334420:three_prime_UTR
CCCATGTATATTACAGAAAA+TGG 0.218730 2_4:+52760052 Msa0334420:CDS
GTTTCCAGAAAGCCTCTTAT+TGG 0.220974 2_4:-52759629 None:intergenic
CTATCAATTATTTATGATAT+AGG 0.221767 2_4:-52756133 None:intergenic
TCGTCCAATAAGAGGCTTTC+TGG 0.231790 2_4:+52759625 Msa0334420:CDS
CTAACAACTTGCAATATATA+TGG 0.241529 2_4:+52756108 Msa0334420:five_prime_UTR
ATTGACAATTTGCTACTTAG+AGG 0.245418 2_4:+52756974 Msa0334420:CDS
TTCCCAAATGGCTTCCTCTT+TGG 0.245482 2_4:+52756305 Msa0334420:CDS
TGATCATTATCATCGCTATT+TGG 0.257693 2_4:+52756640 Msa0334420:CDS
AGTCACTGTTCCCCTCCTTT+TGG 0.262969 2_4:+52758544 Msa0334420:CDS
TAAAATAGGTTGACTTTGTT+TGG 0.264175 2_4:+52760834 Msa0334420:three_prime_UTR
TATCAATTATTTATGATATA+GGG 0.265295 2_4:-52756132 None:intergenic
CATATATATTGCAAGTTGTT+AGG 0.281380 2_4:-52756107 None:intergenic
GCAGTGGATTTACTGAATTA+AGG 0.285599 2_4:-52757825 None:intergenic
GTGGAGATGCGCTCTATTCT+TGG 0.307880 2_4:+52759470 Msa0334420:CDS
TTGAAGCTTTAGTGCATGTT+TGG 0.310839 2_4:+52760892 Msa0334420:three_prime_UTR
AGCAAGCACTTCCTCTTATC+AGG 0.312366 2_4:+52756328 Msa0334420:CDS
TGGAGATAGGGTTAAGTATT+GGG 0.316186 2_4:+52758459 Msa0334420:CDS
TGAAGTCCAGGCTGCCTCTT+AGG 0.319947 2_4:-52759532 None:intergenic
AACATGCTATTTATTATTAT+GGG 0.326765 2_4:+52760789 Msa0334420:three_prime_UTR
TTGTCTAAGTTATTTGAAAC+TGG 0.327543 2_4:+52760721 Msa0334420:exon
ATGGTAAAGGTTTAAGCAAC+TGG 0.328340 2_4:+52756466 Msa0334420:CDS
CTCCAAAGAGGAAGCCATTT+GGG 0.333320 2_4:-52756307 None:intergenic
AAACCATTGAGCAGAAAGTT+TGG 0.334067 2_4:-52760613 None:intergenic
TTCATTGGCATCAATAACTA+TGG 0.342694 2_4:+52759551 Msa0334420:CDS
AGTGGATATGATATAAGATT+TGG 0.349477 2_4:+52760552 Msa0334420:CDS
AAAGATGCGTATATTATTAC+AGG 0.351139 2_4:-52756065 None:intergenic
TTGTTACCTGATAGTGCTTT+CGG 0.363705 2_4:-52758654 None:intergenic
ACGCATCTTTGTTGGTAACT+TGG 0.376965 2_4:+52756078 Msa0334420:five_prime_UTR
GTGATAGACAAGCTGCAAAC+AGG 0.383393 2_4:+52759033 Msa0334420:CDS
TTCCCAAACTTTCTGCTCAA+TGG 0.385519 2_4:+52760610 Msa0334420:CDS
AGAGGCTTTCTGGAAACAAC+TGG 0.386074 2_4:+52759635 Msa0334420:CDS
AACCATTGAGCAGAAAGTTT+GGG 0.391857 2_4:-52760612 None:intergenic
CAGTGGATTTACTGAATTAA+GGG 0.398043 2_4:-52757824 None:intergenic
AATAATATACGCATCTTTGT+TGG 0.400180 2_4:+52756070 Msa0334420:five_prime_UTR
ATTATACCGAAAGCACTATC+AGG 0.402916 2_4:+52758648 Msa0334420:CDS
GACAACTTTGAATGGAATAG+TGG 0.410660 2_4:+52760534 Msa0334420:CDS
CAGCCTTGCTTAGAGCCATA+AGG 0.415493 2_4:+52760372 Msa0334420:CDS
TTGGAGATAGGGTTAAGTAT+TGG 0.424221 2_4:+52758458 Msa0334420:CDS
GCTCCAAAGAGGAAGCCATT+TGG 0.426924 2_4:-52756308 None:intergenic
TGGAGATGCGCTCTATTCTT+GGG 0.438307 2_4:+52759471 Msa0334420:CDS
TGGCATTCCAATTGGTGATC+AGG 0.439107 2_4:+52759667 Msa0334420:CDS
GCTGTAACAGGAGGGATATA+TGG 0.439550 2_4:+52756911 Msa0334420:intron
TTCAGACAATGCCTTTATCA+AGG 0.439830 2_4:+52758507 Msa0334420:CDS
TCATGACTTGCCGCAAGAGC+TGG 0.444264 2_4:+52757775 Msa0334420:CDS
ACAAGCTGCAAACAGGGCCT+TGG 0.448384 2_4:+52759040 Msa0334420:CDS
AGAATAGAGCGCATCTCCAC+AGG 0.450574 2_4:-52759467 None:intergenic
TAGTAGAGATCCTTGGCAAT+TGG 0.451945 2_4:-52759496 None:intergenic
CTTATTGGACGAGCTGCCTC+GGG 0.456704 2_4:-52759614 None:intergenic
ATTTACTACATGATTTCAAA+CGG 0.464093 2_4:+52760324 Msa0334420:CDS
TCTTATTGGACGAGCTGCCT+CGG 0.466216 2_4:-52759615 None:intergenic
TCACATTCTTCATCTCTAAG+AGG 0.467731 2_4:-52759014 None:intergenic
AAGATTTGGACTTTATTATG+TGG 0.475808 2_4:+52760566 Msa0334420:CDS
ATGTAAGAGGATATATGATA+TGG 0.476107 2_4:+52760502 Msa0334420:CDS
CAAGAGCTGGAAGAAAGATA+TGG 0.480523 2_4:+52757788 Msa0334420:CDS
CCAGTAAAACAGTTTCCAAA+AGG 0.480806 2_4:-52758559 None:intergenic
TAACAACTTGCAATATATAT+GGG 0.481880 2_4:+52756109 Msa0334420:five_prime_UTR
AGAGGCAGCCTGGACTTCAT+TGG 0.482888 2_4:+52759536 Msa0334420:CDS
ACAAGTATATACCTGATAAG+AGG 0.485883 2_4:-52756339 None:intergenic
GTGAGTACCTGATCACCAAT+TGG 0.493854 2_4:-52759674 None:intergenic
CTTTGTGGTTCCAAAGGGCA+TGG 0.495123 2_4:+52759988 Msa0334420:CDS
GCAAAGCAAGGTGGAACCAT+TGG 0.496798 2_4:+52758963 Msa0334420:CDS
TTCTCCTTAGTAGAGATCCT+TGG 0.507971 2_4:-52759503 None:intergenic
ATGATAAACAACGATGAGAA+TGG 0.510394 2_4:+52756605 Msa0334420:CDS
AGTAGAGAGGTAGCAATCCT+TGG 0.511372 2_4:-52759585 None:intergenic
GGTTCCAAAGGGCATGGAAA+AGG 0.512646 2_4:+52759994 Msa0334420:CDS
GAGTCTCCTAAGAGGCAGCC+TGG 0.514131 2_4:+52759526 Msa0334420:CDS
AAGGTTCTTTGTGGTTCCAA+AGG 0.514132 2_4:+52759982 Msa0334420:CDS
AACCAGGGTTGGCTCATTGA+TGG 0.514628 2_4:-52758485 None:intergenic
GAGGCAGCTCGTCCAATAAG+AGG 0.517737 2_4:+52759617 Msa0334420:CDS
ATCAAATTGATGTCATCACT+TGG 0.520414 2_4:+52756758 Msa0334420:CDS
CTTGCTCAAGTCTTGTATGT+TGG 0.524575 2_4:-52760667 None:intergenic
AGGTTCTTTGTGGTTCCAAA+GGG 0.525008 2_4:+52759983 Msa0334420:CDS
TCAGACAATGCCTTTATCAA+GGG 0.530291 2_4:+52758508 Msa0334420:CDS
TATTGATGCCAATGAAGTCC+AGG 0.531915 2_4:-52759544 None:intergenic
AGGAATGCCAAGGTTCTTTG+TGG 0.531982 2_4:+52759973 Msa0334420:CDS
TGATGGTGAATTGTCACAAA+TGG 0.533966 2_4:-52757755 None:intergenic
TATCTTTCTTCCAGCTCTTG+CGG 0.535241 2_4:-52757785 None:intergenic
AGTAGATCTCAATTCCCAAA+TGG 0.537495 2_4:+52756293 Msa0334420:CDS
ATGAGAGATGGCATTCCAAT+TGG 0.546379 2_4:+52759659 Msa0334420:CDS
ATTGCCAAGGATCTCTACTA+AGG 0.546796 2_4:+52759499 Msa0334420:CDS
GGAGGGGAACAGTGACTAGG+AGG 0.553475 2_4:-52758538 None:intergenic
TGCATGTTTGGAATCACGAC+GGG 0.562099 2_4:+52760904 Msa0334420:three_prime_UTR
AAAGGCATTGTCTGAAACCA+GGG 0.563183 2_4:-52758500 None:intergenic
GTAAAACAGTTTCCAAAAGG+AGG 0.563433 2_4:-52758556 None:intergenic
TTGTAGAACATAACTCCACT+TGG 0.565184 2_4:-52756944 None:intergenic
TAAAACAGTTTCCAAAAGGA+GGG 0.565965 2_4:-52758555 None:intergenic
TCTAAGAGGTTCATACATGA+AGG 0.568522 2_4:-52759000 None:intergenic
TACGTTTAACAAAATTAATG+TGG 0.569205 2_4:-52760945 None:intergenic
TGCGTATATTATTACAGGAT+AGG 0.570819 2_4:-52756060 None:intergenic
TAAAGGCATTGTCTGAAACC+AGG 0.571284 2_4:-52758501 None:intergenic
GCTCTTGCGGCAAGTCATGA+TGG 0.572189 2_4:-52757772 None:intergenic
TATGTTGCTGTCGCATGCTA+AGG 0.572610 2_4:+52758618 Msa0334420:CDS
TTTGGAACCACAAAGAACCT+TGG 0.575560 2_4:-52759980 None:intergenic
TGGAAGAAAGATATGGTGGT+TGG 0.575720 2_4:+52757795 Msa0334420:CDS
AGAAAAGGTGCAGATGTAAG+AGG 0.578627 2_4:+52760489 Msa0334420:intron
TTCTTGGGAACCAATTGCCA+AGG 0.580281 2_4:+52759486 Msa0334420:CDS
GAACTAATGCAGGCAAAGCA+AGG 0.580545 2_4:+52758951 Msa0334420:intron
AAGGAGAAGAGTCTCCTAAG+AGG 0.585069 2_4:+52759518 Msa0334420:CDS
TGGCTCTAAGCAAGGCTGCA+AGG 0.588145 2_4:-52760367 None:intergenic
ATTGGACGAGCTGCCTCGGG+TGG 0.588976 2_4:-52759611 None:intergenic
TCGCCTTATGGCTCTAAGCA+AGG 0.591153 2_4:-52760375 None:intergenic
TGCGTGGTAATAGCATGGTA+TGG 0.596452 2_4:-52760864 None:intergenic
AAAGGAGGGGAACAGTGACT+AGG 0.598946 2_4:-52758541 None:intergenic
ATCGTCATGCTTGCGTTGAG+TGG 0.599831 2_4:-52760296 None:intergenic
GAAACAACTGGGATGAGAGA+TGG 0.601749 2_4:+52759647 Msa0334420:CDS
CACCATCAATGAGCCAACCC+TGG 0.602806 2_4:+52758483 Msa0334420:CDS
AGGAAGTGCTTGCTCCAAAG+AGG 0.603083 2_4:-52756319 None:intergenic
CTATGGAGCTCTCTATGCCA+AGG 0.604277 2_4:+52759568 Msa0334420:CDS
GCATTGTCTGAAACCAGGGT+TGG 0.606969 2_4:-52758496 None:intergenic
GGTATATGCAACAATGCCAA+TGG 0.608539 2_4:-52758979 None:intergenic
TGATAGACAAGCTGCAAACA+GGG 0.611361 2_4:+52759034 Msa0334420:CDS
TCAAATTGATGTCATCACTT+GGG 0.615282 2_4:+52756759 Msa0334420:CDS
AAAACAGTTTCCAAAAGGAG+GGG 0.615400 2_4:-52758554 None:intergenic
TGGAGCAGACAGGAATGCCA+AGG 0.616181 2_4:+52759963 Msa0334420:intron
CCTCTCTACTTGTCCACCCG+AGG 0.619027 2_4:+52759598 Msa0334420:CDS
GAGGGGAACAGTGACTAGGA+GGG 0.619410 2_4:-52758537 None:intergenic
TGGTAAAGGTTTAAGCAACT+GGG 0.623254 2_4:+52756467 Msa0334420:CDS
CCTCGGGTGGACAAGTAGAG+AGG 0.631077 2_4:-52759598 None:intergenic
GAATAGAGCGCATCTCCACA+GGG 0.634164 2_4:-52759466 None:intergenic
GTAGTTGCGTGGTAATAGCA+TGG 0.637204 2_4:-52760869 None:intergenic
GACAAGGAGAGGCTCAACAT+CGG 0.647124 2_4:-52758587 None:intergenic
CCAGCCTATGACAAAAGCCA+AGG 0.648248 2_4:-52759057 None:intergenic
GCAACATATTGTGCATGACA+AGG 0.650248 2_4:-52758603 None:intergenic
ATATTGTGCATGACAAGGAG+AGG 0.651243 2_4:-52758598 None:intergenic
GATGTATTCAGTCACAAACC+AGG 0.651357 2_4:+52756489 Msa0334420:CDS
TAATATACATGGGCATGTTG+TGG 0.654062 2_4:-52760042 None:intergenic
GAGCTGGAAGAAAGATATGG+TGG 0.660794 2_4:+52757791 Msa0334420:CDS
GAGGCTTTCTGGAAACAACT+GGG 0.662288 2_4:+52759636 Msa0334420:CDS
GTGCATGTTTGGAATCACGA+CGG 0.665289 2_4:+52760903 Msa0334420:three_prime_UTR
TATCATCACTAGTATTGCTG+AGG 0.666598 2_4:-52760644 None:intergenic
TAAAGCTTCAAGTAGTTGCG+TGG 0.667594 2_4:-52760880 None:intergenic
TGGAGCAAGAACATTATCAG+AGG 0.672774 2_4:-52756166 None:intergenic
TATGGAGACATAAATCCAAG+TGG 0.685998 2_4:+52756929 Msa0334420:CDS
CTAATGCAGGCAAAGCAAGG+TGG 0.706988 2_4:+52758954 Msa0334420:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATCAATTATTTATGATATA+GGG - chr2_4:52756135-52756154 None:intergenic 10.0%
!! TGTATAATTAAAATACAATT+TGG + chr2_4:52756569-52756588 Msa0334420:intron 10.0%
!!! ATTTTTATGATTAATATAAC+AGG - chr2_4:52757651-52757670 None:intergenic 10.0%
!! GTTATATTAATCATAAAAAT+TGG + chr2_4:52757651-52757670 Msa0334420:intron 10.0%
!!! GTAAATTTTACTATTAAAAT+AGG + chr2_4:52760820-52760839 Msa0334420:three_prime_UTR 10.0%
!! CTATCAATTATTTATGATAT+AGG - chr2_4:52756136-52756155 None:intergenic 15.0%
!! AATAAAAAAAGAAATTTACC+TGG - chr2_4:52756510-52756529 None:intergenic 15.0%
!!! TATATAGATTTTCAATTTCA+TGG + chr2_4:52756789-52756808 Msa0334420:CDS 15.0%
!! TAATTTGAAAGATAAAATTG+TGG - chr2_4:52756865-52756884 None:intergenic 15.0%
!!! TTATGCGATTTTTTTTTTAA+CGG + chr2_4:52757175-52757194 Msa0334420:intron 15.0%
!! TTAATATTTACTCATTTGTT+CGG + chr2_4:52757216-52757235 Msa0334420:intron 15.0%
!! GGAAAAAATAAAAAATCAAA+GGG - chr2_4:52758131-52758150 None:intergenic 15.0%
!! AGGAAAAAATAAAAAATCAA+AGG - chr2_4:52758132-52758151 None:intergenic 15.0%
!! TTTATTATTTACTTATAACC+AGG - chr2_4:52758164-52758183 None:intergenic 15.0%
!! TACTTTCAATAAAAAAACAT+AGG - chr2_4:52758775-52758794 None:intergenic 15.0%
!! TGTCAATTAATATTTGATAA+TGG + chr2_4:52759752-52759771 Msa0334420:intron 15.0%
!!! TAATGGATTTTTTTAAAGAT+TGG + chr2_4:52759769-52759788 Msa0334420:intron 15.0%
!!! AATGGATTTTTTTAAAGATT+GGG + chr2_4:52759770-52759789 Msa0334420:intron 15.0%
!!! ATGAACAATTATTTGATAAT+CGG + chr2_4:52759896-52759915 Msa0334420:intron 15.0%
!!! TTTTTTGGTATGTATAAATT+TGG + chr2_4:52760206-52760225 Msa0334420:intron 15.0%
!!! AACATGCTATTTATTATTAT+GGG + chr2_4:52760789-52760808 Msa0334420:three_prime_UTR 15.0%
!! TAACAACTTGCAATATATAT+GGG + chr2_4:52756109-52756128 Msa0334420:five_prime_UTR 20.0%
!! AAAATATCTCAGAAGAAAAA+AGG - chr2_4:52756372-52756391 None:intergenic 20.0%
!! CAATCTACAAAGAAAAAAAA+AGG - chr2_4:52756428-52756447 None:intergenic 20.0%
!!! TTTTTTTCTTTGTAGATTGA+AGG + chr2_4:52756429-52756448 Msa0334420:intron 20.0%
!!! ATACAATTTGGTAAATTTTC+AGG + chr2_4:52756581-52756600 Msa0334420:intron 20.0%
!! TTTAGACTTAAATGTAGTTA+AGG - chr2_4:52756716-52756735 None:intergenic 20.0%
!!! TAAGAATTTTACATGTTAAG+TGG + chr2_4:52757125-52757144 Msa0334420:intron 20.0%
!! TAATATTTACTCATTTGTTC+GGG + chr2_4:52757217-52757236 Msa0334420:intron 20.0%
!! TGAGTAATAATTTGAGAAAA+TGG - chr2_4:52757468-52757487 None:intergenic 20.0%
!! TCAATAAAATTTACTAGTGA+TGG - chr2_4:52757604-52757623 None:intergenic 20.0%
!!! AATCAGTTTTTTATGCAATT+TGG - chr2_4:52757993-52758012 None:intergenic 20.0%
!!! ACATTTTTCATATGCTAAAA+CGG + chr2_4:52758876-52758895 Msa0334420:intron 20.0%
!! TGATTGAATTTCAACTAATA+AGG + chr2_4:52759275-52759294 Msa0334420:intron 20.0%
!! TCATTAATAATGTACATTCA+AGG - chr2_4:52759347-52759366 None:intergenic 20.0%
!!! ATGGATTTTTTTAAAGATTG+GGG + chr2_4:52759771-52759790 Msa0334420:intron 20.0%
!!! TTGATATGATTTCTTTTGTT+TGG + chr2_4:52759943-52759962 Msa0334420:intron 20.0%
!! ATGAATTGGTTAATATATCA+TGG + chr2_4:52760238-52760257 Msa0334420:intron 20.0%
!! ATTTACTACATGATTTCAAA+CGG + chr2_4:52760324-52760343 Msa0334420:CDS 20.0%
!!! AATTTTATTATGTGCAGAAA+AGG + chr2_4:52760474-52760493 Msa0334420:intron 20.0%
!!! CAACATGCTATTTATTATTA+TGG + chr2_4:52760788-52760807 Msa0334420:three_prime_UTR 20.0%
!! TACGTTTAACAAAATTAATG+TGG - chr2_4:52760948-52760967 None:intergenic 20.0%
! AAAGATGCGTATATTATTAC+AGG - chr2_4:52756068-52756087 None:intergenic 25.0%
! AATAATATACGCATCTTTGT+TGG + chr2_4:52756070-52756089 Msa0334420:five_prime_UTR 25.0%
! CATATATATTGCAAGTTGTT+AGG - chr2_4:52756110-52756129 None:intergenic 25.0%
! CTAACAACTTGCAATATATA+TGG + chr2_4:52756108-52756127 Msa0334420:five_prime_UTR 25.0%
!! TTGCATTTTCATTCAACTAT+TGG - chr2_4:52756189-52756208 None:intergenic 25.0%
! GTTGAATGAAAATGCAAAAA+TGG + chr2_4:52756192-52756211 Msa0334420:exon 25.0%
! AACTAGTTATGTGAATAACT+GGG - chr2_4:52756841-52756860 None:intergenic 25.0%
! AAACTAGTTATGTGAATAAC+TGG - chr2_4:52756842-52756861 None:intergenic 25.0%
!!! TAGTTCATTGTTTCTGAAAA+TGG + chr2_4:52757017-52757036 Msa0334420:intron 25.0%
!! AGTGAGTTTGTTCATATATT+AGG - chr2_4:52757098-52757117 None:intergenic 25.0%
! GTACATATTAAACCATTACA+GGG - chr2_4:52757153-52757172 None:intergenic 25.0%
! TGTACATATTAAACCATTAC+AGG - chr2_4:52757154-52757173 None:intergenic 25.0%
!!! TTTTTTACTGGAATTGTCAT+AGG - chr2_4:52757546-52757565 None:intergenic 25.0%
!!! TTCATGCAGTTTTTTTTTAC+TGG - chr2_4:52757558-52757577 None:intergenic 25.0%
! ATAAAATTTACTAGTGATGG+TGG - chr2_4:52757601-52757620 None:intergenic 25.0%
! TTCTTAGTTATACCTAAATC+TGG + chr2_4:52757704-52757723 Msa0334420:intron 25.0%
!!! AACTATTCAGTTTGGTTTTT+TGG - chr2_4:52757967-52757986 None:intergenic 25.0%
!! TTTGGTTTAACTATTCAGTT+TGG - chr2_4:52757975-52757994 None:intergenic 25.0%
! GAAAAATAAACGAAATGTGA+AGG - chr2_4:52758071-52758090 None:intergenic 25.0%
! AAAAAATCAAAGGGAATACT+AGG - chr2_4:52758122-52758141 None:intergenic 25.0%
!! TTCATCACATTTTCTATGTT+AGG + chr2_4:52758700-52758719 Msa0334420:intron 25.0%
!! TCATCACATTTTCTATGTTA+GGG + chr2_4:52758701-52758720 Msa0334420:intron 25.0%
! TGTTGACAATATCAGTTTAA+GGG + chr2_4:52758796-52758815 Msa0334420:intron 25.0%
!!! AAAAAAGTGTCACATTGAAA+AGG + chr2_4:52758832-52758851 Msa0334420:intron 25.0%
! TAGAATCAAAACAATTCTCT+TGG - chr2_4:52759108-52759127 None:intergenic 25.0%
! AATGTTAGAGAATATGTTAC+TGG + chr2_4:52759317-52759336 Msa0334420:intron 25.0%
!!! TTATTAGATCCTCTAGTTTT+TGG + chr2_4:52759437-52759456 Msa0334420:CDS 25.0%
!! CCATTTTCTGTAATATACAT+GGG - chr2_4:52760055-52760074 None:intergenic 25.0%
!! ACCATTTTCTGTAATATACA+TGG - chr2_4:52760056-52760075 None:intergenic 25.0%
! AGAAAGAAGTAACTATTTGA+AGG + chr2_4:52760180-52760199 Msa0334420:intron 25.0%
!!! ACTATTTGAAGGTAGTTTTT+TGG + chr2_4:52760191-52760210 Msa0334420:intron 25.0%
! TATTAACCAATTCATAACTC+CGG - chr2_4:52760233-52760252 None:intergenic 25.0%
! ATGTAAGAGGATATATGATA+TGG + chr2_4:52760502-52760521 Msa0334420:CDS 25.0%
!!! CATTTTTTGACAACTTTGAA+TGG + chr2_4:52760526-52760545 Msa0334420:CDS 25.0%
! AGTGGATATGATATAAGATT+TGG + chr2_4:52760552-52760571 Msa0334420:CDS 25.0%
! AAGATTTGGACTTTATTATG+TGG + chr2_4:52760566-52760585 Msa0334420:CDS 25.0%
!! TTGTCTAAGTTATTTGAAAC+TGG + chr2_4:52760721-52760740 Msa0334420:exon 25.0%
!! TAAAATAGGTTGACTTTGTT+TGG + chr2_4:52760834-52760853 Msa0334420:three_prime_UTR 25.0%
TGCGTATATTATTACAGGAT+AGG - chr2_4:52756063-52756082 None:intergenic 30.0%
ACAAGTATATACCTGATAAG+AGG - chr2_4:52756342-52756361 None:intergenic 30.0%
ATGATAAACAACGATGAGAA+TGG + chr2_4:52756605-52756624 Msa0334420:CDS 30.0%
TGATCATTATCATCGCTATT+TGG + chr2_4:52756640-52756659 Msa0334420:CDS 30.0%
TCTAAATGATTGTCTTTGAC+AGG + chr2_4:52756730-52756749 Msa0334420:intron 30.0%
ATCAAATTGATGTCATCACT+TGG + chr2_4:52756758-52756777 Msa0334420:CDS 30.0%
TCAAATTGATGTCATCACTT+GGG + chr2_4:52756759-52756778 Msa0334420:CDS 30.0%
! GATTTTCAATTTCATGGACT+AGG + chr2_4:52756795-52756814 Msa0334420:CDS 30.0%
ACTAGTTATGTGAATAACTG+GGG - chr2_4:52756840-52756859 None:intergenic 30.0%
!! ATTGACAATTTGCTACTTAG+AGG + chr2_4:52756974-52756993 Msa0334420:CDS 30.0%
!! TGACTTTTGAGTGATCAATT+CGG + chr2_4:52757050-52757069 Msa0334420:intron 30.0%
TGAGTTAAGGGTTAATTAGT+TGG - chr2_4:52757258-52757277 None:intergenic 30.0%
TAAGTCATAACGATGATCAT+TGG - chr2_4:52757316-52757335 None:intergenic 30.0%
TTAAATGCAACCTTATGTGT+CGG - chr2_4:52757440-52757459 None:intergenic 30.0%
! CAGTGGATTTACTGAATTAA+GGG - chr2_4:52757827-52757846 None:intergenic 30.0%
! GGTTTCTTAACTCAAACTTT+TGG - chr2_4:52757898-52757917 None:intergenic 30.0%
!! CATTTCGTTTATTTTTCGTG+CGG + chr2_4:52758074-52758093 Msa0334420:intron 30.0%
!! TTATTTTTCGTGCGGTTTAA+CGG + chr2_4:52758082-52758101 Msa0334420:intron 30.0%
! TCCTAATTATTGGTAATTGC+AGG + chr2_4:52758395-52758414 Msa0334420:intron 30.0%
TCCTGCAATTACCAATAATT+AGG - chr2_4:52758399-52758418 None:intergenic 30.0%
!!! GAACTTTGTTTTAAGAGCTT+TGG + chr2_4:52758439-52758458 Msa0334420:CDS 30.0%
!!! TTTTAAGAGCTTTGGAGATA+GGG + chr2_4:52758447-52758466 Msa0334420:CDS 30.0%
TAAAACAGTTTCCAAAAGGA+GGG - chr2_4:52758558-52758577 None:intergenic 30.0%
TGATGAAAAATGCTCAGTTT+AGG - chr2_4:52758687-52758706 None:intergenic 30.0%
! CATCACATTTTCTATGTTAG+GGG + chr2_4:52758702-52758721 Msa0334420:intron 30.0%
! ATTTTCTATGTTAGGGGAAA+AGG + chr2_4:52758708-52758727 Msa0334420:intron 30.0%
! TTTTCTATGTTAGGGGAAAA+GGG + chr2_4:52758709-52758728 Msa0334420:intron 30.0%
! ACATAGGACGACAATTATTT+TGG - chr2_4:52758759-52758778 None:intergenic 30.0%
! GTGTTGACAATATCAGTTTA+AGG + chr2_4:52758795-52758814 Msa0334420:intron 30.0%
TATCAGTTTAAGGGTAGAAA+TGG + chr2_4:52758805-52758824 Msa0334420:intron 30.0%
! TGCTAAAACGGTAGTTATTT+TGG + chr2_4:52758888-52758907 Msa0334420:intron 30.0%
!!! AAACGGTAGTTATTTTGGAA+CGG + chr2_4:52758893-52758912 Msa0334420:intron 30.0%
! GTAAGATGGAGTGTTTAATT+AGG + chr2_4:52758921-52758940 Msa0334420:intron 30.0%
! AGTAAATTTTCCTGCCTTTT+TGG + chr2_4:52759403-52759422 Msa0334420:intron 30.0%
TTCATTGGCATCAATAACTA+TGG + chr2_4:52759551-52759570 Msa0334420:CDS 30.0%
!! AACATAATGACAAGAGCATT+TGG - chr2_4:52759707-52759726 None:intergenic 30.0%
CCCATGTATATTACAGAAAA+TGG + chr2_4:52760052-52760071 Msa0334420:CDS 30.0%
AGTGATCAAGCAAAACATAT+CGG - chr2_4:52760118-52760137 None:intergenic 30.0%
TGGTATGTATAAATTTGGAC+CGG + chr2_4:52760211-52760230 Msa0334420:intron 30.0%
AGTAGATCTCAATTCCCAAA+TGG + chr2_4:52756293-52756312 Msa0334420:CDS 35.0%
ATGGTAAAGGTTTAAGCAAC+TGG + chr2_4:52756466-52756485 Msa0334420:CDS 35.0%
TGGTAAAGGTTTAAGCAACT+GGG + chr2_4:52756467-52756486 Msa0334420:CDS 35.0%
TATGGAGACATAAATCCAAG+TGG + chr2_4:52756929-52756948 Msa0334420:CDS 35.0%
TTGTAGAACATAACTCCACT+TGG - chr2_4:52756947-52756966 None:intergenic 35.0%
GTTAAGGGTTAATTAGTTGG+AGG - chr2_4:52757255-52757274 None:intergenic 35.0%
TGATCATTGGCATAAGTGTT+GGG - chr2_4:52757303-52757322 None:intergenic 35.0%
ATGATCATTGGCATAAGTGT+TGG - chr2_4:52757304-52757323 None:intergenic 35.0%
AACACACTCTAATTTCGTGT+CGG - chr2_4:52757388-52757407 None:intergenic 35.0%
GTTATACCTAAATCTGGACA+TGG + chr2_4:52757710-52757729 Msa0334420:intron 35.0%
! TGATGGTGAATTGTCACAAA+TGG - chr2_4:52757758-52757777 None:intergenic 35.0%
! GCAGTGGATTTACTGAATTA+AGG - chr2_4:52757828-52757847 None:intergenic 35.0%
TAAATACTCTTGCATTGCTG+TGG + chr2_4:52757871-52757890 Msa0334420:intron 35.0%
!!! TTTTTTCCTTTCAACAGTCC+TGG + chr2_4:52758143-52758162 Msa0334420:intron 35.0%
TTATAACCAGGACTGTTGAA+AGG - chr2_4:52758152-52758171 None:intergenic 35.0%
CACTAGGTAGTATAAAGGTT+CGG - chr2_4:52758281-52758300 None:intergenic 35.0%
AACCTTTATACTACCTAGTG+TGG + chr2_4:52758281-52758300 Msa0334420:intron 35.0%
AACCACACTAGGTAGTATAA+AGG - chr2_4:52758286-52758305 None:intergenic 35.0%
GATTCATTAACAGCTCGTTT+CGG + chr2_4:52758312-52758331 Msa0334420:intron 35.0%
ACTGAACAGTTACAACAGTT+TGG - chr2_4:52758343-52758362 None:intergenic 35.0%
ACTGTTGTAACTGTTCAGTT+TGG + chr2_4:52758344-52758363 Msa0334420:intron 35.0%
CCAATAATTAGGACTGTTCA+TGG - chr2_4:52758388-52758407 None:intergenic 35.0%
CCATGAACAGTCCTAATTAT+TGG + chr2_4:52758385-52758404 Msa0334420:intron 35.0%
!!! GTTTTAAGAGCTTTGGAGAT+AGG + chr2_4:52758446-52758465 Msa0334420:CDS 35.0%
TTGGAGATAGGGTTAAGTAT+TGG + chr2_4:52758458-52758477 Msa0334420:CDS 35.0%
TGGAGATAGGGTTAAGTATT+GGG + chr2_4:52758459-52758478 Msa0334420:CDS 35.0%
TTCAGACAATGCCTTTATCA+AGG + chr2_4:52758507-52758526 Msa0334420:CDS 35.0%
TCAGACAATGCCTTTATCAA+GGG + chr2_4:52758508-52758527 Msa0334420:CDS 35.0%
!! AGGGTATTTTCCCTTGATAA+AGG - chr2_4:52758521-52758540 None:intergenic 35.0%
AAAACAGTTTCCAAAAGGAG+GGG - chr2_4:52758557-52758576 None:intergenic 35.0%
GTAAAACAGTTTCCAAAAGG+AGG - chr2_4:52758559-52758578 None:intergenic 35.0%
CCAGTAAAACAGTTTCCAAA+AGG - chr2_4:52758562-52758581 None:intergenic 35.0%
!! CCTTTTGGAAACTGTTTTAC+TGG + chr2_4:52758559-52758578 Msa0334420:CDS 35.0%
!! ATTATACCGAAAGCACTATC+AGG + chr2_4:52758648-52758667 Msa0334420:CDS 35.0%
! TTGTTACCTGATAGTGCTTT+CGG - chr2_4:52758657-52758676 None:intergenic 35.0%
TCTAAGAGGTTCATACATGA+AGG - chr2_4:52759003-52759022 None:intergenic 35.0%
TCACATTCTTCATCTCTAAG+AGG - chr2_4:52759017-52759036 None:intergenic 35.0%
! AAATTTTCCTGCCTTTTTGG+TGG + chr2_4:52759406-52759425 Msa0334420:intron 35.0%
TAATATACATGGGCATGTTG+TGG - chr2_4:52760045-52760064 None:intergenic 35.0%
!! GACTACTCAAAATTTGTTGC+AGG + chr2_4:52760263-52760282 Msa0334420:intron 35.0%
GACAACTTTGAATGGAATAG+TGG + chr2_4:52760534-52760553 Msa0334420:CDS 35.0%
AACCATTGAGCAGAAAGTTT+GGG - chr2_4:52760615-52760634 None:intergenic 35.0%
AAACCATTGAGCAGAAAGTT+TGG - chr2_4:52760616-52760635 None:intergenic 35.0%
TATCATCACTAGTATTGCTG+AGG - chr2_4:52760647-52760666 None:intergenic 35.0%
! TTGAAGCTTTAGTGCATGTT+TGG + chr2_4:52760892-52760911 Msa0334420:three_prime_UTR 35.0%
!! ACGCATCTTTGTTGGTAACT+TGG + chr2_4:52756078-52756097 Msa0334420:five_prime_UTR 40.0%
TGGAGCAAGAACATTATCAG+AGG - chr2_4:52756169-52756188 None:intergenic 40.0%
!! GCAGCTTTTGAAGATGGTAA+AGG + chr2_4:52756453-52756472 Msa0334420:CDS 40.0%
GATGTATTCAGTCACAAACC+AGG + chr2_4:52756489-52756508 Msa0334420:CDS 40.0%
ATAACTGGGGAATACTTACG+AGG - chr2_4:52756827-52756846 None:intergenic 40.0%
TGTTAAGTGGAACCCTGTAA+TGG + chr2_4:52757138-52757157 Msa0334420:intron 40.0%
GGTTAATTAGTTGGAGGTCT+GGG - chr2_4:52757249-52757268 None:intergenic 40.0%
!! GCTCAACTGGTTTGAGTTAA+GGG - chr2_4:52757270-52757289 None:intergenic 40.0%
!! ATCATTGGCATAAGTGTTGG+GGG - chr2_4:52757301-52757320 None:intergenic 40.0%
! GATCATTGGCATAAGTGTTG+GGG - chr2_4:52757302-52757321 None:intergenic 40.0%
ACTTATGACCTATGTAGCAC+TGG + chr2_4:52757331-52757350 Msa0334420:intron 40.0%
! TTAAAGTGCCAGTGCTACAT+AGG - chr2_4:52757342-52757361 None:intergenic 40.0%
!! TGTTGGTGTTAGTGCTTCAT+AGG + chr2_4:52757518-52757537 Msa0334420:intron 40.0%
!! GTTGGTGTTAGTGCTTCATA+GGG + chr2_4:52757519-52757538 Msa0334420:intron 40.0%
TATCTTTCTTCCAGCTCTTG+CGG - chr2_4:52757788-52757807 None:intergenic 40.0%
CAAGAGCTGGAAGAAAGATA+TGG + chr2_4:52757788-52757807 Msa0334420:CDS 40.0%
TGGAAGAAAGATATGGTGGT+TGG + chr2_4:52757795-52757814 Msa0334420:CDS 40.0%
GAGTAAAAGAATGAGAGCAG+TGG - chr2_4:52757844-52757863 None:intergenic 40.0%
TGACTCGCAAAGAATCAGTT+TGG + chr2_4:52758198-52758217 Msa0334420:intron 40.0%
TATACTACCTAGTGTGGTTC+AGG + chr2_4:52758287-52758306 Msa0334420:intron 40.0%
!! AAAGGCATTGTCTGAAACCA+GGG - chr2_4:52758503-52758522 None:intergenic 40.0%
!! TAAAGGCATTGTCTGAAACC+AGG - chr2_4:52758504-52758523 None:intergenic 40.0%
ATATTGTGCATGACAAGGAG+AGG - chr2_4:52758601-52758620 None:intergenic 40.0%
GCAACATATTGTGCATGACA+AGG - chr2_4:52758606-52758625 None:intergenic 40.0%
TAGGGGAAAAGGGACTATAT+AGG + chr2_4:52758719-52758738 Msa0334420:intron 40.0%
AGGGGAAAAGGGACTATATA+GGG + chr2_4:52758720-52758739 Msa0334420:intron 40.0%
!!! GGTAGTTATTTTGGAACGGA+TGG + chr2_4:52758897-52758916 Msa0334420:intron 40.0%
!! AGGAAGTACTGAACTAATGC+AGG + chr2_4:52758941-52758960 Msa0334420:intron 40.0%
GGTATATGCAACAATGCCAA+TGG - chr2_4:52758982-52759001 None:intergenic 40.0%
TGATAGACAAGCTGCAAACA+GGG + chr2_4:52759034-52759053 Msa0334420:CDS 40.0%
TCATAGGCTGGTAAGTCATT+AGG + chr2_4:52759069-52759088 Msa0334420:intron 40.0%
TAACCTTCTTGCCACCAAAA+AGG - chr2_4:52759420-52759439 None:intergenic 40.0%
TAGTAGAGATCCTTGGCAAT+TGG - chr2_4:52759499-52759518 None:intergenic 40.0%
ATTGCCAAGGATCTCTACTA+AGG + chr2_4:52759499-52759518 Msa0334420:CDS 40.0%
TTCTCCTTAGTAGAGATCCT+TGG - chr2_4:52759506-52759525 None:intergenic 40.0%
TATTGATGCCAATGAAGTCC+AGG - chr2_4:52759547-52759566 None:intergenic 40.0%
GTTTCCAGAAAGCCTCTTAT+TGG - chr2_4:52759632-52759651 None:intergenic 40.0%
ATGAGAGATGGCATTCCAAT+TGG + chr2_4:52759659-52759678 Msa0334420:CDS 40.0%
GATTTGAACTTCATGCCTTG+AGG + chr2_4:52759837-52759856 Msa0334420:intron 40.0%
GTTCATGAGATTAAGCTCAG+TGG - chr2_4:52759882-52759901 None:intergenic 40.0%
!! TTCTTTTGTTTGGAGCAGAC+AGG + chr2_4:52759953-52759972 Msa0334420:intron 40.0%
! TTTGGAACCACAAAGAACCT+TGG - chr2_4:52759983-52760002 None:intergenic 40.0%
AAGGTTCTTTGTGGTTCCAA+AGG + chr2_4:52759982-52760001 Msa0334420:CDS 40.0%
AGGTTCTTTGTGGTTCCAAA+GGG + chr2_4:52759983-52760002 Msa0334420:CDS 40.0%
TTTGGACCGGAGTTATGAAT+TGG + chr2_4:52760224-52760243 Msa0334420:intron 40.0%
! AGAAAAGGTGCAGATGTAAG+AGG + chr2_4:52760489-52760508 Msa0334420:intron 40.0%
TTCCCAAACTTTCTGCTCAA+TGG + chr2_4:52760610-52760629 Msa0334420:CDS 40.0%
! CTTGCTCAAGTCTTGTATGT+TGG - chr2_4:52760670-52760689 None:intergenic 40.0%
TAAAGCTTCAAGTAGTTGCG+TGG - chr2_4:52760883-52760902 None:intergenic 40.0%
TTCCCAAATGGCTTCCTCTT+TGG + chr2_4:52756305-52756324 Msa0334420:CDS 45.0%
CTCCAAAGAGGAAGCCATTT+GGG - chr2_4:52756310-52756329 None:intergenic 45.0%
AGCAAGCACTTCCTCTTATC+AGG + chr2_4:52756328-52756347 Msa0334420:CDS 45.0%
!! GAAGGAGCAGCTTTTGAAGA+TGG + chr2_4:52756447-52756466 Msa0334420:CDS 45.0%
TCCTTGTCATGAGCTGTAAC+AGG + chr2_4:52756899-52756918 Msa0334420:intron 45.0%
TCCTGTTACAGCTCATGACA+AGG - chr2_4:52756903-52756922 None:intergenic 45.0%
TTGTCATGAGCTGTAACAGG+AGG + chr2_4:52756902-52756921 Msa0334420:intron 45.0%
TGTCATGAGCTGTAACAGGA+GGG + chr2_4:52756903-52756922 Msa0334420:intron 45.0%
GCTGTAACAGGAGGGATATA+TGG + chr2_4:52756911-52756930 Msa0334420:intron 45.0%
GGGTTAATTAGTTGGAGGTC+TGG - chr2_4:52757250-52757269 None:intergenic 45.0%
!! GGCTCAACTGGTTTGAGTTA+AGG - chr2_4:52757271-52757290 None:intergenic 45.0%
TGCCTTTCTCGTGTATGTGT+TGG + chr2_4:52757501-52757520 Msa0334420:intron 45.0%
CACCAACACATACACGAGAA+AGG - chr2_4:52757506-52757525 None:intergenic 45.0%
AGCAAGCCATGTCCAGATTT+AGG - chr2_4:52757719-52757738 None:intergenic 45.0%
GAGCTGGAAGAAAGATATGG+TGG + chr2_4:52757791-52757810 Msa0334420:CDS 45.0%
AGAAACCAGTGAGTGTTTGC+TGG + chr2_4:52757911-52757930 Msa0334420:intron 45.0%
!! AGTATAAAGGTTCGGTGCAC+TGG - chr2_4:52758273-52758292 None:intergenic 45.0%
TATGTTGCTGTCGCATGCTA+AGG + chr2_4:52758618-52758637 Msa0334420:CDS 45.0%
TTGGAACGGATGGAGTAAGA+TGG + chr2_4:52758907-52758926 Msa0334420:intron 45.0%
GAACTAATGCAGGCAAAGCA+AGG + chr2_4:52758951-52758970 Msa0334420:intron 45.0%
GTGATAGACAAGCTGCAAAC+AGG + chr2_4:52759033-52759052 Msa0334420:CDS 45.0%
GGGTACTCACCAAAAACTAG+AGG - chr2_4:52759449-52759468 None:intergenic 45.0%
!!! AGTTTTTGGTGAGTACCCTG+TGG + chr2_4:52759451-52759470 Msa0334420:CDS 45.0%
TGGAGATGCGCTCTATTCTT+GGG + chr2_4:52759471-52759490 Msa0334420:CDS 45.0%
TTCTTGGGAACCAATTGCCA+AGG + chr2_4:52759486-52759505 Msa0334420:CDS 45.0%
AAGGAGAAGAGTCTCCTAAG+AGG + chr2_4:52759518-52759537 Msa0334420:CDS 45.0%
AGTAGAGAGGTAGCAATCCT+TGG - chr2_4:52759588-52759607 None:intergenic 45.0%
TCGTCCAATAAGAGGCTTTC+TGG + chr2_4:52759625-52759644 Msa0334420:CDS 45.0%
! AGAGGCTTTCTGGAAACAAC+TGG + chr2_4:52759635-52759654 Msa0334420:CDS 45.0%
! GAGGCTTTCTGGAAACAACT+GGG + chr2_4:52759636-52759655 Msa0334420:CDS 45.0%
GAAACAACTGGGATGAGAGA+TGG + chr2_4:52759647-52759666 Msa0334420:CDS 45.0%
! TGGCATTCCAATTGGTGATC+AGG + chr2_4:52759667-52759686 Msa0334420:CDS 45.0%
GTGAGTACCTGATCACCAAT+TGG - chr2_4:52759677-52759696 None:intergenic 45.0%
CTTCATGCCTTGAGGTTACA+CGG + chr2_4:52759845-52759864 Msa0334420:intron 45.0%
AGGAATGCCAAGGTTCTTTG+TGG + chr2_4:52759973-52759992 Msa0334420:CDS 45.0%
! ACAACCTTTTCCATGCCCTT+TGG - chr2_4:52760001-52760020 None:intergenic 45.0%
CTTCATCATCACTCGCCTTA+TGG - chr2_4:52760390-52760409 None:intergenic 45.0%
TGCGTGGTAATAGCATGGTA+TGG - chr2_4:52760867-52760886 None:intergenic 45.0%
GTAGTTGCGTGGTAATAGCA+TGG - chr2_4:52760872-52760891 None:intergenic 45.0%
! GTGCATGTTTGGAATCACGA+CGG + chr2_4:52760903-52760922 Msa0334420:three_prime_UTR 45.0%
! TGCATGTTTGGAATCACGAC+GGG + chr2_4:52760904-52760923 Msa0334420:three_prime_UTR 45.0%
!! ATAAGTAAATAATAAAAATT+TGG + chr2_4:52758168-52758187 Msa0334420:intron 5.0%
GCTCCAAAGAGGAAGCCATT+TGG - chr2_4:52756311-52756330 None:intergenic 50.0%
!! AGGAAGTGCTTGCTCCAAAG+AGG - chr2_4:52756322-52756341 None:intergenic 50.0%
!! ATAAGTGTTGGGGGATTGGG+TGG - chr2_4:52757292-52757311 None:intergenic 50.0%
!! GGCATAAGTGTTGGGGGATT+GGG - chr2_4:52757295-52757314 None:intergenic 50.0%
!! TGGCATAAGTGTTGGGGGAT+TGG - chr2_4:52757296-52757315 None:intergenic 50.0%
! GCAACCTTATGTGTCGGTGT+CGG - chr2_4:52757434-52757453 None:intergenic 50.0%
!! GGACATGGCTTGCTTGATCT+AGG + chr2_4:52757725-52757744 Msa0334420:intron 50.0%
! AACCAGTGAGTGTTTGCTGG+CGG + chr2_4:52757914-52757933 Msa0334420:intron 50.0%
!! GTGTTTGCTGGCGGTGTTAT+CGG + chr2_4:52757923-52757942 Msa0334420:intron 50.0%
GGATAAGTCGCGAACTGAAC+TGG - chr2_4:52758050-52758069 None:intergenic 50.0%
!!! TCGGTGCACTGGTTTTGAAC+TGG - chr2_4:52758262-52758281 None:intergenic 50.0%
GAATCGTCCTGAACCACACT+AGG - chr2_4:52758297-52758316 None:intergenic 50.0%
CTGTTCATGGTTCAGCTAGG+AGG - chr2_4:52758375-52758394 None:intergenic 50.0%
GGACTGTTCATGGTTCAGCT+AGG - chr2_4:52758378-52758397 None:intergenic 50.0%
!! AACCAGGGTTGGCTCATTGA+TGG - chr2_4:52758488-52758507 None:intergenic 50.0%
! GCATTGTCTGAAACCAGGGT+TGG - chr2_4:52758499-52758518 None:intergenic 50.0%
AAAGGAGGGGAACAGTGACT+AGG - chr2_4:52758544-52758563 None:intergenic 50.0%
! AGTCACTGTTCCCCTCCTTT+TGG + chr2_4:52758544-52758563 Msa0334420:CDS 50.0%
GACAAGGAGAGGCTCAACAT+CGG - chr2_4:52758590-52758609 None:intergenic 50.0%
CTAATGCAGGCAAAGCAAGG+TGG + chr2_4:52758954-52758973 Msa0334420:intron 50.0%
GCAAAGCAAGGTGGAACCAT+TGG + chr2_4:52758963-52758982 Msa0334420:CDS 50.0%
!! AGGGCCTTGGCTTTTGTCAT+AGG + chr2_4:52759053-52759072 Msa0334420:CDS 50.0%
CCAGCCTATGACAAAAGCCA+AGG - chr2_4:52759060-52759079 None:intergenic 50.0%
!! CCTTGGCTTTTGTCATAGGC+TGG + chr2_4:52759057-52759076 Msa0334420:CDS 50.0%
CTTCTTGCCACCAAAAAGGC+AGG - chr2_4:52759416-52759435 None:intergenic 50.0%
!! CTGCCTTTTTGGTGGCAAGA+AGG + chr2_4:52759414-52759433 Msa0334420:intron 50.0%
GAATAGAGCGCATCTCCACA+GGG - chr2_4:52759469-52759488 None:intergenic 50.0%
AGAATAGAGCGCATCTCCAC+AGG - chr2_4:52759470-52759489 None:intergenic 50.0%
GTGGAGATGCGCTCTATTCT+TGG + chr2_4:52759470-52759489 Msa0334420:CDS 50.0%
CTATGGAGCTCTCTATGCCA+AGG + chr2_4:52759568-52759587 Msa0334420:CDS 50.0%
TCTTATTGGACGAGCTGCCT+CGG - chr2_4:52759618-52759637 None:intergenic 50.0%
AGCTTGACCGTGTAACCTCA+AGG - chr2_4:52759855-52759874 None:intergenic 50.0%
CTTTGTGGTTCCAAAGGGCA+TGG + chr2_4:52759988-52760007 Msa0334420:CDS 50.0%
! GGTTCCAAAGGGCATGGAAA+AGG + chr2_4:52759994-52760013 Msa0334420:CDS 50.0%
ATCGTCATGCTTGCGTTGAG+TGG - chr2_4:52760299-52760318 None:intergenic 50.0%
CAGCCTTGCTTAGAGCCATA+AGG + chr2_4:52760372-52760391 Msa0334420:CDS 50.0%
!! TCGCCTTATGGCTCTAAGCA+AGG - chr2_4:52760378-52760397 None:intergenic 50.0%
GACTCCGACACCGACACATA+AGG + chr2_4:52757427-52757446 Msa0334420:intron 55.0%
GCTCTTGCGGCAAGTCATGA+TGG - chr2_4:52757775-52757794 None:intergenic 55.0%
! TCATGACTTGCCGCAAGAGC+TGG + chr2_4:52757775-52757794 Msa0334420:CDS 55.0%
!! TTGCTGGCGGTGTTATCGGT+AGG + chr2_4:52757927-52757946 Msa0334420:intron 55.0%
CACCATCAATGAGCCAACCC+TGG + chr2_4:52758483-52758502 Msa0334420:CDS 55.0%
GAGGGGAACAGTGACTAGGA+GGG - chr2_4:52758540-52758559 None:intergenic 55.0%
ACAAGCTGCAAACAGGGCCT+TGG + chr2_4:52759040-52759059 Msa0334420:CDS 55.0%
TGAAGTCCAGGCTGCCTCTT+AGG - chr2_4:52759535-52759554 None:intergenic 55.0%
AGAGGCAGCCTGGACTTCAT+TGG + chr2_4:52759536-52759555 Msa0334420:CDS 55.0%
CTTATTGGACGAGCTGCCTC+GGG - chr2_4:52759617-52759636 None:intergenic 55.0%
GAGGCAGCTCGTCCAATAAG+AGG + chr2_4:52759617-52759636 Msa0334420:CDS 55.0%
TGGAGCAGACAGGAATGCCA+AGG + chr2_4:52759963-52759982 Msa0334420:intron 55.0%
!! TGGCTCTAAGCAAGGCTGCA+AGG - chr2_4:52760370-52760389 None:intergenic 55.0%
! TGTCGGAGTCGTGTCGGTGT+TGG - chr2_4:52757417-52757436 None:intergenic 60.0%
!! TGTCGGTGTCGGAGTCGTGT+CGG - chr2_4:52757423-52757442 None:intergenic 60.0%
CACCGCCAGCAAACACTCAC+TGG - chr2_4:52757919-52757938 None:intergenic 60.0%
GGAGGGGAACAGTGACTAGG+AGG - chr2_4:52758541-52758560 None:intergenic 60.0%
GAGTCTCCTAAGAGGCAGCC+TGG + chr2_4:52759526-52759545 Msa0334420:CDS 60.0%
CCTCGGGTGGACAAGTAGAG+AGG - chr2_4:52759601-52759620 None:intergenic 60.0%
CCTCTCTACTTGTCCACCCG+AGG + chr2_4:52759598-52759617 Msa0334420:CDS 60.0%
GGGGGATTGGGTGGCTCAAC+TGG - chr2_4:52757283-52757302 None:intergenic 65.0%
ATTGGACGAGCTGCCTCGGG+TGG - chr2_4:52759614-52759633 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 52756046 52760970 52756046 ID=Msa0334420;Name=Msa0334420
chr2_4 mRNA 52756046 52760970 52756046 ID=Msa0334420-mRNA-1;Parent=Msa0334420;Name=Msa0334420-mRNA-1;_AED=0.19;_eAED=0.19;_QI=151|1|1|1|1|1|12|242|529
chr2_4 exon 52756046 52756349 52756046 ID=Msa0334420-mRNA-1:exon:15875;Parent=Msa0334420-mRNA-1
chr2_4 exon 52756444 52756510 52756444 ID=Msa0334420-mRNA-1:exon:15876;Parent=Msa0334420-mRNA-1
chr2_4 exon 52756603 52756661 52756603 ID=Msa0334420-mRNA-1:exon:15877;Parent=Msa0334420-mRNA-1
chr2_4 exon 52756752 52756827 52756752 ID=Msa0334420-mRNA-1:exon:15878;Parent=Msa0334420-mRNA-1
chr2_4 exon 52756921 52756995 52756921 ID=Msa0334420-mRNA-1:exon:15879;Parent=Msa0334420-mRNA-1
chr2_4 exon 52757747 52757834 52757747 ID=Msa0334420-mRNA-1:exon:15880;Parent=Msa0334420-mRNA-1
chr2_4 exon 52758417 52758669 52758417 ID=Msa0334420-mRNA-1:exon:15881;Parent=Msa0334420-mRNA-1
chr2_4 exon 52758963 52759078 52758963 ID=Msa0334420-mRNA-1:exon:15882;Parent=Msa0334420-mRNA-1
chr2_4 exon 52759436 52759688 52759436 ID=Msa0334420-mRNA-1:exon:15883;Parent=Msa0334420-mRNA-1
chr2_4 exon 52759971 52760073 52759971 ID=Msa0334420-mRNA-1:exon:15884;Parent=Msa0334420-mRNA-1
chr2_4 exon 52760285 52760393 52760285 ID=Msa0334420-mRNA-1:exon:15885;Parent=Msa0334420-mRNA-1
chr2_4 exon 52760491 52760970 52760491 ID=Msa0334420-mRNA-1:exon:15886;Parent=Msa0334420-mRNA-1
chr2_4 five_prime_UTR 52756046 52756196 52756046 ID=Msa0334420-mRNA-1:five_prime_utr;Parent=Msa0334420-mRNA-1
chr2_4 CDS 52756197 52756349 52756197 ID=Msa0334420-mRNA-1:cds;Parent=Msa0334420-mRNA-1
chr2_4 CDS 52756444 52756510 52756444 ID=Msa0334420-mRNA-1:cds;Parent=Msa0334420-mRNA-1
chr2_4 CDS 52756603 52756661 52756603 ID=Msa0334420-mRNA-1:cds;Parent=Msa0334420-mRNA-1
chr2_4 CDS 52756752 52756827 52756752 ID=Msa0334420-mRNA-1:cds;Parent=Msa0334420-mRNA-1
chr2_4 CDS 52756921 52756995 52756921 ID=Msa0334420-mRNA-1:cds;Parent=Msa0334420-mRNA-1
chr2_4 CDS 52757747 52757834 52757747 ID=Msa0334420-mRNA-1:cds;Parent=Msa0334420-mRNA-1
chr2_4 CDS 52758417 52758669 52758417 ID=Msa0334420-mRNA-1:cds;Parent=Msa0334420-mRNA-1
chr2_4 CDS 52758963 52759078 52758963 ID=Msa0334420-mRNA-1:cds;Parent=Msa0334420-mRNA-1
chr2_4 CDS 52759436 52759688 52759436 ID=Msa0334420-mRNA-1:cds;Parent=Msa0334420-mRNA-1
chr2_4 CDS 52759971 52760073 52759971 ID=Msa0334420-mRNA-1:cds;Parent=Msa0334420-mRNA-1
chr2_4 CDS 52760285 52760393 52760285 ID=Msa0334420-mRNA-1:cds;Parent=Msa0334420-mRNA-1
chr2_4 CDS 52760491 52760728 52760491 ID=Msa0334420-mRNA-1:cds;Parent=Msa0334420-mRNA-1
chr2_4 three_prime_UTR 52760729 52760970 52760729 ID=Msa0334420-mRNA-1:three_prime_utr;Parent=Msa0334420-mRNA-1
Gene Sequence

>Msa0334420

ATGAAAATGCAAAAATGGTTTATGCATGTTGTGTTTACACTGCTTTGCTCTTCTCTTTTACATGTTCAAAGTTCTCATGAAGTTGATGATGAAATCAGTAGATCTCAATTCCCAAATGGCTTCCTCTTTGGAGCAAGCACTTCCTCTTATCAGATTGAAGGAGCAGCTTTTGAAGATGGTAAAGGTTTAAGCAACTGGGATGTATTCAGTCACAAACCAGGAATGATAAACAACGATGAGAATGGTGATATAGCAAATGATCATTATCATCGCTATTTGGAAGATATCAAATTGATGTCATCACTTGGGATAAATGTATATAGATTTTCAATTTCATGGACTAGGATTTTACCTCGAGGGATATATGGAGACATAAATCCAAGTGGAGTTATGTTCTACAACAATCTTATTGACAATTTGCTACTTAGAGGAATTGAGCCATTTGTGACAATTCACCATCATGACTTGCCGCAAGAGCTGGAAGAAAGATATGGTGGTTGGCTTAGTCCCTTAATTCAGAGAGATTTTGTTCATTTTGCTGAACTTTGTTTTAAGAGCTTTGGAGATAGGGTTAAGTATTGGGTCACCATCAATGAGCCAACCCTGGTTTCAGACAATGCCTTTATCAAGGGAAAATACCCTCCTAGTCACTGTTCCCCTCCTTTTGGAAACTGTTTTACTGGTAACTCCGATGTTGAGCCTCTCCTTGTCATGCACAATATGTTGCTGTCGCATGCTAAGGCTGTTGAATTATACCGAAAGCACTATCAGGCAAAGCAAGGTGGAACCATTGGCATTGTTGCATATACCTTCATGTATGAACCTCTTAGAGATGAAGAATGTGATAGACAAGCTGCAAACAGGGCCTTGGCTTTTGTCATAGGCTGGTTATTAGATCCTCTAGTTTTTGGTGAGTACCCTGTGGAGATGCGCTCTATTCTTGGGAACCAATTGCCAAGGATCTCTACTAAGGAGAAGAGTCTCCTAAGAGGCAGCCTGGACTTCATTGGCATCAATAACTATGGAGCTCTCTATGCCAAGGATTGCTACCTCTCTACTTGTCCACCCGAGGCAGCTCGTCCAATAAGAGGCTTTCTGGAAACAACTGGGATGAGAGATGGCATTCCAATTGGTGATCAGACAGGAATGCCAAGGTTCTTTGTGGTTCCAAAGGGCATGGAAAAGGTTGTAGACTACATAAAGATAAAATACCACAACATGCCCATGTATATTACAGAAAATGGATATTCTTCGCCACTCAACGCAAGCATGACGATGCATGATTTACTACATGATTTCAAACGGATAGAGTATCATAAAGCTTACCTTGCAGCCTTGCTTAGAGCCATAAGAAAAGGTGCAGATGTAAGAGGATATATGATATGGTCATTTTTTGACAACTTTGAATGGAATAGTGGATATGATATAAGATTTGGACTTTATTATGTGGATAGACAGACACTTGAACGAATTCCCAAACTTTCTGCTCAATGGTTTTCTAGTTTCCTCAGCAATACTAGTGATGATACCAACATACAAGACTTGAGCAAGCAGTATAGAAGCAAATATGTGATAACTGCTGTTGTCTAA
Protein sequence

>Msa0334420

MKMQKWFMHVVFTLLCSSLLHVQSSHEVDDEISRSQFPNGFLFGASTSSYQIEGAAFEDGKGLSNWDVFSHKPGMINNDENGDIANDHYHRYLEDIKLMSSLGINVYRFSISWTRILPRGIYGDINPSGVMFYNNLIDNLLLRGIEPFVTIHHHDLPQELEERYGGWLSPLIQRDFVHFAELCFKSFGDRVKYWVTINEPTLVSDNAFIKGKYPPSHCSPPFGNCFTGNSDVEPLLVMHNMLLSHAKAVELYRKHYQAKQGGTIGIVAYTFMYEPLRDEECDRQAANRALAFVIGWLLDPLVFGEYPVEMRSILGNQLPRISTKEKSLLRGSLDFIGINNYGALYAKDCYLSTCPPEAARPIRGFLETTGMRDGIPIGDQTGMPRFFVVPKGMEKVVDYIKIKYHNMPMYITENGYSSPLNASMTMHDLLHDFKRIEYHKAYLAALLRAIRKGADVRGYMIWSFFDNFEWNSGYDIRFGLYYVDRQTLERIPKLSAQWFSSFLSNTSDDTNIQDLSKQYRSKYVITAVV*