Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0482870 | XP_003613103.1 | 98.934 | 469 | 5 | 0 | 12 | 480 | 1 | 469 | 0.0 | 953 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0482870 | sp|Q9C9V6|Y1790_ARATH | 75.000 | 472 | 102 | 5 | 12 | 480 | 1 | 459 | 0.0 | 653 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0482870 | G7JXS6 | 98.934 | 469 | 5 | 0 | 12 | 480 | 1 | 469 | 0.0 | 953 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007230 | Msa0482870 | 0.814284 | 1.666011e-51 | -8.615850e-47 |
| Msa0051230 | Msa0482870 | -0.801632 | 8.217048e-49 | -8.615850e-47 |
| Msa0055590 | Msa0482870 | 0.817292 | 3.557123e-52 | -8.615850e-47 |
| Msa0058340 | Msa0482870 | 0.804664 | 1.938320e-49 | -8.615850e-47 |
| Msa0189950 | Msa0482870 | 0.819219 | 1.302873e-52 | -8.615850e-47 |
| Msa0226250 | Msa0482870 | 0.830385 | 3.025607e-55 | -8.615850e-47 |
| Msa0370480 | Msa0482870 | 0.800420 | 1.453320e-48 | -8.615850e-47 |
| Msa0260820 | Msa0482870 | -0.810668 | 1.027851e-50 | -8.615850e-47 |
| Msa0266000 | Msa0482870 | -0.823776 | 1.154752e-53 | -8.615850e-47 |
| Msa0282590 | Msa0482870 | 0.804688 | 1.915449e-49 | -8.615850e-47 |
| Msa0299200 | Msa0482870 | 0.832700 | 8.137274e-56 | -8.615850e-47 |
| Msa0304740 | Msa0482870 | 0.839014 | 2.040592e-57 | -8.615850e-47 |
| Msa0307510 | Msa0482870 | 0.802210 | 6.251026e-49 | -8.615850e-47 |
| Msa0315150 | Msa0482870 | 0.803066 | 4.163179e-49 | -8.615850e-47 |
| Msa0331590 | Msa0482870 | 0.844788 | 6.083438e-59 | -8.615850e-47 |
| Msa0334420 | Msa0482870 | 0.834440 | 2.993143e-56 | -8.615850e-47 |
| Msa0357100 | Msa0482870 | 0.816476 | 5.423525e-52 | -8.615850e-47 |
| Msa0482840 | Msa0482870 | 0.885858 | 5.657600e-72 | -8.615850e-47 |
| Msa0482870 | Msa0490870 | 0.802147 | 6.440324e-49 | -8.615850e-47 |
| Msa0482870 | Msa0492740 | 0.802649 | 5.074599e-49 | -8.615850e-47 |
| Msa0482870 | Msa0567020 | 0.816512 | 5.322347e-52 | -8.615850e-47 |
| Msa0482870 | Msa0569370 | 0.820323 | 7.287132e-53 | -8.615850e-47 |
| Msa0482870 | Msa0658570 | 0.821534 | 3.837241e-53 | -8.615850e-47 |
| Msa0482870 | Msa0659510 | 0.810377 | 1.187886e-50 | -8.615850e-47 |
| Msa0482870 | Msa0703490 | 0.830658 | 2.593662e-55 | -8.615850e-47 |
| Msa0482870 | Msa0734340 | 0.814735 | 1.324275e-51 | -8.615850e-47 |
| Msa0482870 | Msa0762310 | 0.820591 | 6.325383e-53 | -8.615850e-47 |
| Msa0482870 | Msa0776030 | 0.810523 | 1.105216e-50 | -8.615850e-47 |
| Msa0482870 | Msa0782970 | 0.817025 | 4.084301e-52 | -8.615850e-47 |
| Msa0482870 | Msa0804840 | 0.922541 | 8.596219e-89 | -8.615850e-47 |
| Msa0482870 | Msa0847390 | 0.803813 | 2.914027e-49 | -8.615850e-47 |
| Msa0482870 | Msa0881480 | 0.806020 | 1.007503e-49 | -8.615850e-47 |
| Msa0482870 | Msa0891040 | 0.818177 | 2.245687e-52 | -8.615850e-47 |
| Msa0482870 | Msa0921630 | 0.807096 | 5.972421e-50 | -8.615850e-47 |
| Msa0482870 | Msa0946120 | 0.836976 | 6.824120e-57 | -8.615850e-47 |
| Msa0482870 | Msa0990960 | 0.805797 | 1.122064e-49 | -8.615850e-47 |
| Msa0482870 | Msa1008490 | 0.819259 | 1.275693e-52 | -8.615850e-47 |
| Msa0482870 | Msa1009020 | 0.824805 | 6.613662e-54 | -8.615850e-47 |
| Msa0482870 | Msa1032430 | 0.803148 | 4.003779e-49 | -8.615850e-47 |
| Msa0482870 | Msa1040120 | 0.844923 | 5.595682e-59 | -8.615850e-47 |
| Msa0482870 | Msa1041770 | 0.804131 | 2.503349e-49 | -8.615850e-47 |
| Msa0482870 | Msa1083410 | 0.884227 | 2.295916e-71 | -8.615850e-47 |
| Msa0482870 | Msa1099030 | 0.810575 | 1.076649e-50 | -8.615850e-47 |
| Msa0482870 | Msa1128160 | 0.862356 | 5.368809e-64 | -8.615850e-47 |
| Msa0482870 | Msa1165360 | 0.860025 | 2.752907e-63 | -8.615850e-47 |
| Msa0482870 | Msa1170040 | -0.801876 | 7.320942e-49 | -8.615850e-47 |
| Msa0482870 | Msa1246040 | 0.807141 | 5.844255e-50 | -8.615850e-47 |
| Msa0482870 | Msa1303640 | 0.806160 | 9.414688e-50 | -8.615850e-47 |
| Msa0482870 | Msa1376890 | 0.810522 | 1.105356e-50 | -8.615850e-47 |
| Msa0482870 | Msa1377100 | -0.802920 | 4.461478e-49 | -8.615850e-47 |
| Msa0482870 | Msa1447090 | 0.821145 | 4.716559e-53 | -8.615850e-47 |
| Msa0482870 | Msa1466810 | 0.833625 | 4.790754e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0482870 | MtrunA17_Chr5g0412591 | 92.537 | 469 | 5 | 1 | 12 | 480 | 1 | 439 | 0.0 | 874 |
| Msa0482870 | MtrunA17_Chr8g0367891 | 71.215 | 469 | 98 | 6 | 12 | 479 | 1 | 433 | 0.0 | 612 |
| Msa0482870 | MtrunA17_Chr4g0076521 | 47.447 | 470 | 201 | 7 | 12 | 480 | 1 | 425 | 2.88e-137 | 409 |
| Msa0482870 | MtrunA17_Chr1g0150191 | 45.666 | 473 | 216 | 10 | 12 | 479 | 1 | 437 | 8.81e-128 | 385 |
| Msa0482870 | MtrunA17_Chr5g0401341 | 44.820 | 473 | 215 | 8 | 12 | 479 | 1 | 432 | 5.17e-126 | 381 |
| Msa0482870 | MtrunA17_Chr2g0290741 | 44.350 | 469 | 207 | 7 | 12 | 480 | 1 | 415 | 9.17e-123 | 370 |
| Msa0482870 | MtrunA17_Chr1g0207461 | 41.525 | 472 | 237 | 6 | 12 | 479 | 1 | 437 | 1.96e-118 | 361 |
| Msa0482870 | MtrunA17_Chr4g0050021 | 36.179 | 492 | 264 | 8 | 16 | 480 | 23 | 491 | 3.11e-95 | 302 |
| Msa0482870 | MtrunA17_Chr2g0279481 | 36.673 | 499 | 259 | 9 | 16 | 480 | 23 | 498 | 3.29e-94 | 300 |
| Msa0482870 | MtrunA17_Chr2g0303541 | 37.006 | 481 | 261 | 9 | 12 | 479 | 1 | 452 | 1.51e-88 | 284 |
| Msa0482870 | MtrunA17_Chr2g0285511 | 37.448 | 478 | 260 | 9 | 12 | 480 | 1 | 448 | 2.21e-87 | 280 |
| Msa0482870 | MtrunA17_Chr1g0181181 | 35.256 | 468 | 263 | 7 | 12 | 479 | 1 | 428 | 5.49e-84 | 270 |
| Msa0482870 | MtrunA17_Chr8g0382231 | 33.122 | 474 | 243 | 6 | 27 | 480 | 42 | 461 | 6.58e-83 | 269 |
| Msa0482870 | MtrunA17_Chr5g0401451 | 35.095 | 473 | 213 | 9 | 34 | 479 | 37 | 442 | 3.39e-81 | 265 |
| Msa0482870 | MtrunA17_Chr2g0320691 | 35.619 | 452 | 259 | 7 | 35 | 480 | 21 | 446 | 6.48e-81 | 264 |
| Msa0482870 | MtrunA17_Chr8g0374011 | 35.106 | 470 | 250 | 9 | 39 | 480 | 22 | 464 | 4.61e-78 | 257 |
| Msa0482870 | MtrunA17_Chr7g0245201 | 35.255 | 451 | 249 | 9 | 33 | 480 | 57 | 467 | 7.48e-77 | 253 |
| Msa0482870 | MtrunA17_Chr4g0010091 | 36.364 | 451 | 245 | 7 | 33 | 480 | 30 | 441 | 1.29e-76 | 252 |
| Msa0482870 | MtrunA17_Chr1g0199631 | 37.071 | 437 | 226 | 11 | 55 | 479 | 8 | 407 | 2.39e-76 | 250 |
| Msa0482870 | MtrunA17_Chr4g0053841 | 34.753 | 446 | 250 | 7 | 34 | 479 | 10 | 414 | 1.92e-73 | 243 |
| Msa0482870 | MtrunA17_Chr3g0108331 | 33.929 | 448 | 239 | 7 | 33 | 480 | 20 | 410 | 3.75e-69 | 231 |
| Msa0482870 | MtrunA17_Chr7g0268781 | 35.669 | 471 | 250 | 11 | 23 | 480 | 18 | 448 | 8.29e-67 | 226 |
| Msa0482870 | MtrunA17_Chr1g0195911 | 34.746 | 472 | 249 | 13 | 23 | 480 | 18 | 444 | 1.02e-66 | 226 |
| Msa0482870 | MtrunA17_Chr5g0432861 | 33.778 | 450 | 246 | 8 | 33 | 480 | 21 | 420 | 1.98e-61 | 211 |
| Msa0482870 | MtrunA17_Chr1g0191711 | 31.390 | 446 | 228 | 10 | 38 | 479 | 59 | 430 | 2.59e-60 | 207 |
| Msa0482870 | MtrunA17_Chr4g0003891 | 33.977 | 259 | 130 | 4 | 222 | 480 | 46 | 263 | 3.79e-41 | 153 |
| Msa0482870 | MtrunA17_Chr2g0332281 | 34.749 | 259 | 130 | 4 | 222 | 480 | 24 | 243 | 1.25e-38 | 145 |
| Msa0482870 | MtrunA17_Chr4g0037661 | 26.652 | 469 | 260 | 13 | 38 | 479 | 4 | 415 | 2.15e-36 | 141 |
| Msa0482870 | MtrunA17_Chr4g0023801 | 28.218 | 404 | 219 | 13 | 85 | 480 | 52 | 392 | 2.87e-33 | 132 |
| Msa0482870 | MtrunA17_Chr1g0163311 | 25.057 | 435 | 234 | 12 | 75 | 479 | 36 | 408 | 5.08e-29 | 120 |
| Msa0482870 | MtrunA17_Chr1g0206621 | 37.086 | 151 | 94 | 1 | 44 | 194 | 75 | 224 | 4.61e-23 | 97.8 |
| Msa0482870 | MtrunA17_Chr4g0041491 | 62.712 | 59 | 22 | 0 | 12 | 70 | 1 | 59 | 1.40e-19 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0482870 | AT1G67900.5 | 75.000 | 472 | 102 | 5 | 12 | 480 | 1 | 459 | 0.0 | 653 |
| Msa0482870 | AT1G67900.1 | 75.000 | 472 | 102 | 5 | 12 | 480 | 1 | 459 | 0.0 | 653 |
| Msa0482870 | AT1G67900.3 | 75.000 | 472 | 102 | 5 | 12 | 480 | 1 | 459 | 0.0 | 653 |
| Msa0482870 | AT1G67900.6 | 75.000 | 472 | 102 | 5 | 12 | 480 | 1 | 459 | 0.0 | 653 |
| Msa0482870 | AT1G67900.2 | 75.000 | 472 | 102 | 5 | 12 | 480 | 1 | 459 | 0.0 | 653 |
| Msa0482870 | AT1G67900.4 | 75.000 | 472 | 102 | 5 | 12 | 480 | 1 | 459 | 0.0 | 653 |
| Msa0482870 | AT3G26490.2 | 53.082 | 503 | 180 | 14 | 12 | 493 | 1 | 468 | 9.85e-165 | 476 |
| Msa0482870 | AT3G26490.1 | 53.320 | 497 | 178 | 13 | 12 | 487 | 1 | 464 | 2.08e-163 | 476 |
| Msa0482870 | AT3G26490.3 | 53.320 | 497 | 178 | 13 | 12 | 487 | 1 | 464 | 2.08e-163 | 476 |
| Msa0482870 | AT3G26490.4 | 53.320 | 497 | 178 | 13 | 12 | 487 | 1 | 464 | 2.08e-163 | 476 |
| Msa0482870 | AT5G47800.3 | 41.791 | 469 | 230 | 6 | 12 | 480 | 1 | 426 | 2.02e-122 | 370 |
| Msa0482870 | AT5G47800.1 | 41.791 | 469 | 230 | 6 | 12 | 480 | 1 | 426 | 2.02e-122 | 370 |
| Msa0482870 | AT5G47800.4 | 41.791 | 469 | 230 | 6 | 12 | 480 | 1 | 426 | 2.02e-122 | 370 |
| Msa0482870 | AT5G47800.2 | 41.791 | 469 | 230 | 6 | 12 | 480 | 114 | 539 | 8.38e-121 | 369 |
| Msa0482870 | AT5G67440.3 | 41.401 | 471 | 227 | 8 | 12 | 479 | 1 | 425 | 3.36e-119 | 362 |
| Msa0482870 | AT5G67440.1 | 41.401 | 471 | 227 | 8 | 12 | 479 | 1 | 425 | 3.36e-119 | 362 |
| Msa0482870 | AT2G14820.2 | 42.437 | 476 | 227 | 8 | 12 | 479 | 1 | 437 | 3.27e-118 | 361 |
| Msa0482870 | AT2G14820.1 | 42.437 | 476 | 227 | 8 | 12 | 479 | 1 | 437 | 3.27e-118 | 361 |
| Msa0482870 | AT4G37590.1 | 39.085 | 481 | 213 | 9 | 12 | 479 | 1 | 414 | 2.17e-105 | 327 |
| Msa0482870 | AT5G67440.2 | 41.163 | 430 | 205 | 7 | 52 | 479 | 5 | 388 | 1.60e-104 | 323 |
| Msa0482870 | AT4G31820.1 | 39.662 | 474 | 223 | 10 | 12 | 479 | 1 | 417 | 3.19e-104 | 323 |
| Msa0482870 | AT2G23050.1 | 39.030 | 474 | 208 | 11 | 12 | 479 | 1 | 399 | 1.64e-99 | 308 |
| Msa0482870 | AT5G64330.2 | 33.837 | 529 | 278 | 8 | 18 | 480 | 33 | 555 | 1.74e-89 | 287 |
| Msa0482870 | AT5G64330.1 | 34.026 | 529 | 277 | 9 | 18 | 480 | 33 | 555 | 1.00e-88 | 288 |
| Msa0482870 | AT4G31820.2 | 38.480 | 421 | 197 | 9 | 64 | 479 | 1 | 364 | 9.45e-88 | 279 |
| Msa0482870 | AT5G03250.1 | 34.801 | 477 | 276 | 6 | 12 | 479 | 1 | 451 | 3.41e-86 | 277 |
| Msa0482870 | AT1G30440.1 | 35.924 | 476 | 278 | 8 | 12 | 479 | 1 | 457 | 4.35e-85 | 276 |
| Msa0482870 | AT5G64330.3 | 34.406 | 497 | 254 | 8 | 50 | 480 | 6 | 496 | 5.82e-84 | 271 |
| Msa0482870 | AT5G13600.1 | 37.185 | 476 | 259 | 10 | 12 | 480 | 1 | 443 | 9.50e-82 | 265 |
| Msa0482870 | AT5G67385.1 | 36.748 | 449 | 234 | 7 | 34 | 479 | 22 | 423 | 1.02e-79 | 260 |
| Msa0482870 | AT5G48800.1 | 37.086 | 453 | 225 | 9 | 33 | 480 | 37 | 434 | 9.34e-79 | 258 |
| Msa0482870 | AT3G49970.1 | 35.499 | 431 | 198 | 11 | 50 | 479 | 7 | 358 | 6.96e-72 | 237 |
| Msa0482870 | AT3G49970.2 | 35.499 | 431 | 198 | 11 | 50 | 479 | 7 | 358 | 6.96e-72 | 237 |
| Msa0482870 | AT5G67385.4 | 35.765 | 425 | 223 | 7 | 58 | 479 | 1 | 378 | 2.12e-70 | 234 |
| Msa0482870 | AT5G67385.5 | 35.765 | 425 | 223 | 7 | 58 | 479 | 1 | 378 | 2.12e-70 | 234 |
| Msa0482870 | AT5G67385.2 | 35.765 | 425 | 223 | 7 | 58 | 479 | 1 | 378 | 2.12e-70 | 234 |
| Msa0482870 | AT5G67385.3 | 35.765 | 425 | 223 | 7 | 58 | 479 | 1 | 378 | 2.12e-70 | 234 |
| Msa0482870 | AT3G08570.1 | 35.294 | 459 | 253 | 11 | 24 | 479 | 22 | 439 | 4.15e-70 | 235 |
| Msa0482870 | AT5G10250.2 | 32.334 | 467 | 237 | 7 | 33 | 480 | 46 | 452 | 1.10e-69 | 234 |
| Msa0482870 | AT3G44820.1 | 33.333 | 462 | 263 | 11 | 37 | 479 | 23 | 458 | 3.47e-67 | 228 |
| Msa0482870 | AT1G03010.2 | 35.541 | 453 | 252 | 12 | 35 | 480 | 7 | 426 | 1.05e-66 | 226 |
| Msa0482870 | AT5G10250.1 | 32.385 | 457 | 235 | 8 | 33 | 480 | 46 | 437 | 1.23e-66 | 226 |
| Msa0482870 | AT1G03010.3 | 35.193 | 466 | 260 | 13 | 22 | 480 | 22 | 452 | 1.46e-66 | 226 |
| Msa0482870 | AT5G66560.2 | 32.866 | 499 | 239 | 10 | 39 | 480 | 21 | 480 | 1.51e-66 | 222 |
| Msa0482870 | AT1G03010.1 | 35.541 | 453 | 252 | 12 | 35 | 480 | 34 | 453 | 1.94e-66 | 226 |
| Msa0482870 | AT5G66560.1 | 33.065 | 496 | 242 | 10 | 39 | 480 | 21 | 480 | 8.29e-64 | 219 |
| Msa0482870 | AT3G08660.2 | 31.875 | 480 | 249 | 12 | 19 | 492 | 21 | 428 | 1.75e-63 | 213 |
| Msa0482870 | AT2G30520.1 | 32.143 | 448 | 250 | 11 | 32 | 479 | 25 | 418 | 1.57e-62 | 214 |
| Msa0482870 | AT5G66560.3 | 32.990 | 485 | 235 | 10 | 50 | 480 | 3 | 451 | 2.75e-62 | 215 |
| Msa0482870 | AT5G66560.4 | 35.437 | 412 | 218 | 9 | 81 | 480 | 66 | 441 | 8.20e-62 | 213 |
| Msa0482870 | AT3G08660.1 | 32.409 | 469 | 235 | 12 | 19 | 479 | 21 | 415 | 1.03e-60 | 209 |
| Msa0482870 | AT2G47860.4 | 32.812 | 448 | 261 | 10 | 35 | 480 | 35 | 444 | 1.68e-59 | 202 |
| Msa0482870 | AT2G23050.2 | 36.872 | 358 | 149 | 8 | 124 | 479 | 1 | 283 | 2.31e-59 | 200 |
| Msa0482870 | AT2G47860.1 | 32.450 | 453 | 256 | 10 | 35 | 480 | 35 | 444 | 4.80e-58 | 203 |
| Msa0482870 | AT2G30520.2 | 32.331 | 399 | 218 | 9 | 81 | 479 | 24 | 370 | 1.37e-56 | 197 |
| Msa0482870 | AT2G30520.3 | 32.331 | 399 | 218 | 9 | 81 | 479 | 24 | 370 | 1.37e-56 | 197 |
| Msa0482870 | AT3G50840.1 | 32.880 | 441 | 246 | 7 | 39 | 479 | 18 | 408 | 6.92e-55 | 193 |
| Msa0482870 | AT2G47860.6 | 31.210 | 471 | 261 | 11 | 35 | 480 | 35 | 467 | 1.76e-54 | 190 |
| Msa0482870 | AT2G47860.3 | 30.882 | 476 | 256 | 11 | 35 | 480 | 35 | 467 | 3.28e-53 | 190 |
| Msa0482870 | AT3G08660.3 | 32.108 | 408 | 203 | 10 | 80 | 479 | 14 | 355 | 6.70e-51 | 181 |
| Msa0482870 | AT5G03250.2 | 32.240 | 366 | 213 | 6 | 124 | 480 | 1 | 340 | 2.17e-49 | 176 |
| Msa0482870 | AT3G50840.2 | 31.754 | 422 | 238 | 7 | 58 | 479 | 1 | 372 | 2.43e-48 | 175 |
| Msa0482870 | AT3G50840.3 | 31.754 | 422 | 238 | 7 | 58 | 479 | 1 | 372 | 2.43e-48 | 175 |
| Msa0482870 | AT1G52770.1 | 35.000 | 260 | 134 | 4 | 222 | 480 | 28 | 253 | 2.68e-38 | 145 |
| Msa0482870 | AT3G15570.1 | 33.725 | 255 | 130 | 4 | 231 | 480 | 38 | 258 | 6.72e-36 | 139 |
| Msa0482870 | AT3G19850.1 | 24.113 | 423 | 239 | 7 | 80 | 479 | 51 | 414 | 1.06e-34 | 137 |
| Msa0482870 | AT2G47860.5 | 29.670 | 364 | 211 | 9 | 124 | 480 | 1 | 326 | 3.40e-32 | 129 |
| Msa0482870 | AT2G47860.2 | 29.670 | 364 | 211 | 9 | 124 | 480 | 1 | 326 | 3.40e-32 | 129 |
| Msa0482870 | AT5G48130.1 | 24.198 | 405 | 241 | 9 | 81 | 480 | 76 | 419 | 1.93e-27 | 116 |
| Msa0482870 | AT3G22104.1 | 25.055 | 451 | 256 | 13 | 39 | 479 | 6 | 384 | 1.92e-26 | 112 |
| Msa0482870 | AT1G50280.2 | 22.912 | 419 | 249 | 8 | 81 | 479 | 18 | 382 | 3.68e-26 | 111 |
| Msa0482870 | AT1G50280.1 | 22.912 | 419 | 249 | 8 | 81 | 479 | 51 | 415 | 4.11e-26 | 112 |
| Msa0482870 | AT5G17580.2 | 25.855 | 468 | 277 | 11 | 19 | 479 | 2 | 406 | 5.79e-24 | 105 |
| Msa0482870 | AT5G17580.1 | 25.991 | 454 | 266 | 11 | 33 | 479 | 1 | 391 | 1.73e-23 | 104 |
| Msa0482870 | AT3G03510.1 | 26.904 | 394 | 190 | 12 | 93 | 479 | 8 | 310 | 6.24e-23 | 101 |
Find 165 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTAGCATAGACCTTTAT+TGG | 0.142674 | 3_3:-90453760 | Msa0482870:CDS |
| GAGGATAATTGGAGTGTTTC+TGG | 0.144528 | 3_3:-90451663 | Msa0482870:three_prime_UTR |
| CTTCTTTCTATTTCCGTTCT+TGG | 0.164934 | 3_3:+90453640 | None:intergenic |
| CTTTCACTCTTGTTGAGTTC+TGG | 0.171118 | 3_3:+90451936 | None:intergenic |
| GACTGACCCACCAGAAATTT+TGG | 0.175641 | 3_3:-90452638 | Msa0482870:three_prime_UTR |
| CTCAAAATTATTATTATTAT+AGG | 0.177140 | 3_3:+90451282 | None:intergenic |
| TTTCCGTTCTTGGAAATATT+TGG | 0.180699 | 3_3:+90453650 | None:intergenic |
| AAATATGGACAGACGAATTT+TGG | 0.197060 | 3_3:+90452106 | None:intergenic |
| CATGATGAATTTGATGAAAA+TGG | 0.208213 | 3_3:-90451585 | Msa0482870:three_prime_UTR |
| GTCAGTCAGGCCAAAATTTC+TGG | 0.230862 | 3_3:+90452628 | None:intergenic |
| ACTTGAACAACAACTCTTAA+AGG | 0.232478 | 3_3:+90451834 | None:intergenic |
| AATCAGGAAGTTGAACTATT+TGG | 0.235212 | 3_3:+90454209 | None:intergenic |
| TTGTCTTATTCAACATTTAT+TGG | 0.248410 | 3_3:-90452673 | Msa0482870:three_prime_UTR |
| TCCAAGTTTCATAAACTTCA+TGG | 0.285144 | 3_3:+90454823 | None:intergenic |
| AGAGTTGAAGACTTTGATTT+TGG | 0.291628 | 3_3:+90451630 | None:intergenic |
| TTTCAACTTCTTCAGTCATT+TGG | 0.299710 | 3_3:+90454077 | None:intergenic |
| AGCTTGCTTCCAACTGAAAA+AGG | 0.300589 | 3_3:-90453530 | Msa0482870:CDS |
| TGATCATATCTTGCAAATTC+TGG | 0.304119 | 3_3:+90453065 | None:intergenic |
| AAGGCATTATTATAATGATT+TGG | 0.310050 | 3_3:-90452188 | Msa0482870:three_prime_UTR |
| GTATTCAAGGTGAGGATAAT+TGG | 0.310231 | 3_3:-90451674 | Msa0482870:three_prime_UTR |
| TTCAACATTTATTGGAAGTT+AGG | 0.310597 | 3_3:-90452665 | Msa0482870:three_prime_UTR |
| AAAATAGCGAGCTTGAAATA+TGG | 0.313849 | 3_3:+90452091 | None:intergenic |
| TGAAGAAGCATTGAGAATAT+TGG | 0.313880 | 3_3:+90453466 | None:intergenic |
| CTAAAGAGTGAATTCATAAA+TGG | 0.315904 | 3_3:+90452426 | None:intergenic |
| GATATAGGAATAGGAATCTT+TGG | 0.321567 | 3_3:-90451217 | Msa0482870:three_prime_UTR |
| GAGTTCATTGAGGTGGAAAT+TGG | 0.325342 | 3_3:+90452403 | None:intergenic |
| ATGACTGAAGAAGTTGAAAA+AGG | 0.332313 | 3_3:-90454073 | Msa0482870:CDS |
| TCTACACTTCAGAAGCTATA+AGG | 0.334248 | 3_3:-90454784 | Msa0482870:intron |
| CTATCATTGTTCTCCAATAA+AGG | 0.335482 | 3_3:+90453747 | None:intergenic |
| GTCACAAATTCCACGCATTC+AGG | 0.335723 | 3_3:-90452155 | Msa0482870:three_prime_UTR |
| TGAAAATTTATGCATCTAGA+TGG | 0.337434 | 3_3:-90453676 | Msa0482870:CDS |
| TGAGTTCTAACAGGAGGTTC+TGG | 0.341898 | 3_3:+90452293 | None:intergenic |
| TCTGAAGTGTAGAAAGTATC+TGG | 0.344925 | 3_3:+90454794 | None:intergenic |
| GCCATGAAGTTTATGAAACT+TGG | 0.345527 | 3_3:-90454824 | Msa0482870:CDS |
| CCACAAAGGTGTTGCATTTG+TGG | 0.351531 | 3_3:-90453970 | Msa0482870:CDS |
| TCCACTCCACCCGGAAAATC+AGG | 0.369267 | 3_3:+90454193 | None:intergenic |
| TGTGGTCTGAAGACTTACTA+TGG | 0.375499 | 3_3:+90453988 | None:intergenic |
| TGAAAGAAGGCGGTCGCGTT+CGG | 0.375582 | 3_3:-90453249 | Msa0482870:CDS |
| TGTGACAAACTCACCTTTGT+AGG | 0.375606 | 3_3:+90453884 | None:intergenic |
| TTCAAAGCATAGGCTGCTAT+TGG | 0.379331 | 3_3:-90453564 | Msa0482870:CDS |
| AGGATATGAAACAGAATTAG+TGG | 0.380424 | 3_3:-90452723 | Msa0482870:three_prime_UTR |
| TCTTTGCAGGCATAAGCATT+TGG | 0.386345 | 3_3:+90454267 | None:intergenic |
| AGATAATTTCATAACCCATT+TGG | 0.388847 | 3_3:-90452569 | Msa0482870:three_prime_UTR |
| TTGGTAAATGATGATGGAAT+TGG | 0.390964 | 3_3:-90451561 | Msa0482870:three_prime_UTR |
| ATTCTGAGCATAATCTTTGC+AGG | 0.392741 | 3_3:+90454254 | None:intergenic |
| TGAAAAGTTGATATAGGAAT+AGG | 0.392978 | 3_3:-90451226 | Msa0482870:three_prime_UTR |
| TGTTTGTAAGGGTAATTTAG+AGG | 0.403451 | 3_3:-90451406 | Msa0482870:three_prime_UTR |
| AACTAATAGAAATTAGACTA+TGG | 0.415988 | 3_3:-90452229 | Msa0482870:three_prime_UTR |
| TTACTATCTGTAAGGTGCAC+TGG | 0.417772 | 3_3:-90454928 | Msa0482870:intron |
| TGAGTTGGTGATGACTATAT+TGG | 0.420160 | 3_3:-90453333 | Msa0482870:CDS |
| GTGATCTCATAATTCAAGTA+AGG | 0.425248 | 3_3:-90454635 | Msa0482870:CDS |
| TGCTTCTTCATCTTCAAAGA+TGG | 0.426814 | 3_3:-90453453 | Msa0482870:CDS |
| GTGTCATGAAAAGTTGATAT+AGG | 0.426871 | 3_3:-90451232 | Msa0482870:three_prime_UTR |
| CTTGAACAACAACTCTTAAA+GGG | 0.429190 | 3_3:+90451835 | None:intergenic |
| GACACTGAATGAGTTCTAAC+AGG | 0.432213 | 3_3:+90452284 | None:intergenic |
| TTGGTGTCAGTGACAAATCA+TGG | 0.436046 | 3_3:-90451198 | Msa0482870:three_prime_UTR |
| CCACAAATGCAACACCTTTG+TGG | 0.438524 | 3_3:+90453970 | None:intergenic |
| TGTCACATAGTCATTCTAGA+AGG | 0.445951 | 3_3:-90453868 | Msa0482870:CDS |
| AGCTCTACTACAAGTATTCA+AGG | 0.447165 | 3_3:-90451687 | Msa0482870:three_prime_UTR |
| GGCATAAGCATTTGGATAGC+AGG | 0.447706 | 3_3:+90454275 | None:intergenic |
| GCATCACCAATGAGATTTGA+AGG | 0.447840 | 3_3:+90453701 | None:intergenic |
| GCATTTGTGGTCTGAAGACT+TGG | 0.459180 | 3_3:-90453957 | Msa0482870:CDS |
| TTGTGTAGGAAGAGCACAAA+TGG | 0.459576 | 3_3:+90451518 | None:intergenic |
| TGAATTTGATGAAAATGGTT+TGG | 0.459746 | 3_3:-90451580 | Msa0482870:three_prime_UTR |
| ACTTGTGGATAGGTACCTTC+AGG | 0.460283 | 3_3:-90453147 | Msa0482870:CDS |
| CAAGCTAGAGCAGCATCATC+TGG | 0.460416 | 3_3:-90451798 | Msa0482870:three_prime_UTR |
| TACCTTGAGATAAATGTCAA+TGG | 0.464242 | 3_3:+90453025 | None:intergenic |
| ACAATGATAGCAATCAAATC+TGG | 0.464906 | 3_3:-90453734 | Msa0482870:CDS |
| AACGATCTCGGAGGGCTAGT+TGG | 0.466201 | 3_3:+90453281 | None:intergenic |
| AAGGTTCCTTCAAATCTCAT+TGG | 0.467784 | 3_3:-90453707 | Msa0482870:CDS |
| TTCAATTCTTGCATCCTCCA+TGG | 0.467888 | 3_3:-90454022 | Msa0482870:CDS |
| TCAAAAGTCTTCAACGATCT+CGG | 0.468557 | 3_3:+90453269 | None:intergenic |
| GTCAAGATAAGGAGTCAGTC+AGG | 0.469208 | 3_3:+90452615 | None:intergenic |
| ATTTGGTGATGAGATGAATC+AGG | 0.473504 | 3_3:+90454226 | None:intergenic |
| ATGCTTTGAAGTTATTTCGC+TGG | 0.473982 | 3_3:+90453577 | None:intergenic |
| GAAAGTTTGAGAATCAAATC+AGG | 0.487700 | 3_3:-90453815 | Msa0482870:CDS |
| AAGAAGGGTAGGACTTCAAT+TGG | 0.492020 | 3_3:-90453423 | Msa0482870:CDS |
| CAACTATATCAGTCAAGATA+AGG | 0.493056 | 3_3:+90452604 | None:intergenic |
| AGAATCAAATCAGGAAGTAA+AGG | 0.499839 | 3_3:-90453806 | Msa0482870:CDS |
| GTCAGTACATTGGTAGCTGT+TGG | 0.510499 | 3_3:-90452130 | Msa0482870:three_prime_UTR |
| TTGGAACAGTTCATGTTACA+AGG | 0.510924 | 3_3:-90453314 | Msa0482870:CDS |
| AATGGTTTGGTAAATGATGA+TGG | 0.512979 | 3_3:-90451567 | Msa0482870:three_prime_UTR |
| CTCAACGAGTATTAAGATAG+AGG | 0.515574 | 3_3:-90452895 | Msa0482870:three_prime_UTR |
| ATTCTTGCATCCTCCATGGT+TGG | 0.519380 | 3_3:-90454018 | Msa0482870:CDS |
| CTCTATCTTAATACTCGTTG+AGG | 0.525655 | 3_3:+90452896 | None:intergenic |
| TCATGAGAAGGACATAGTAC+TGG | 0.529142 | 3_3:+90452490 | None:intergenic |
| ATTGAAAGTGGCAAAACTTG+TGG | 0.529222 | 3_3:-90453162 | Msa0482870:CDS |
| ACATAGTACTGGAACTATGA+TGG | 0.530965 | 3_3:+90452501 | None:intergenic |
| GCGAAATAACTTCAAAGCAT+AGG | 0.531559 | 3_3:-90453574 | Msa0482870:CDS |
| TGGTGTCAGTGACAAATCAT+GGG | 0.535315 | 3_3:-90451197 | Msa0482870:three_prime_UTR |
| CTTGCAGCTACAATGTTGTA+AGG | 0.538418 | 3_3:+90454118 | None:intergenic |
| GCATAAGCATTTGGATAGCA+GGG | 0.539705 | 3_3:+90454276 | None:intergenic |
| AATAGTTTCAATGCATCTGC+TGG | 0.540399 | 3_3:+90453928 | None:intergenic |
| GTAGCTCAGTGATACGAGTT+GGG | 0.540881 | 3_3:-90452921 | Msa0482870:three_prime_UTR |
| TTGCATCCTCCATGGTTGGA+AGG | 0.541728 | 3_3:-90454014 | Msa0482870:CDS |
| ACATAGTTCAAAATTGAAAG+TGG | 0.541920 | 3_3:-90453174 | Msa0482870:CDS |
| GTTTGTAAGGGTAATTTAGA+GGG | 0.542040 | 3_3:-90451405 | Msa0482870:three_prime_UTR |
| TTGAATTACAAGAGAGTAGG+AGG | 0.548073 | 3_3:-90453211 | Msa0482870:CDS |
| ACTTTGAATTACAAGAGAGT+AGG | 0.548128 | 3_3:-90453214 | Msa0482870:CDS |
| AGCCATTGACATTTATCTCA+AGG | 0.550508 | 3_3:-90453027 | Msa0482870:CDS |
| TGATCTCATAATTCAAGTAA+GGG | 0.550839 | 3_3:-90454634 | Msa0482870:CDS |
| GTGACAAACTCACCTTTGTA+GGG | 0.551753 | 3_3:+90453885 | None:intergenic |
| TTGTGTGCTAAGTTCTGCTA+TGG | 0.551870 | 3_3:-90454160 | Msa0482870:CDS |
| CAAAGATGGAATTAGCAAGA+AGG | 0.552149 | 3_3:-90453439 | Msa0482870:CDS |
| AAACTTGATTCACAAGCTTG+AGG | 0.555629 | 3_3:-90454050 | Msa0482870:CDS |
| AAAGATGGAATTAGCAAGAA+GGG | 0.557589 | 3_3:-90453438 | Msa0482870:CDS |
| ATTAATTGAACATGGTAGCT+CGG | 0.559101 | 3_3:+90452256 | None:intergenic |
| TTACCAAATATTTCCAAGAA+CGG | 0.560310 | 3_3:-90453653 | Msa0482870:CDS |
| CAGAACTCAACAAGAGTGAA+AGG | 0.560948 | 3_3:-90451935 | Msa0482870:three_prime_UTR |
| GATCTCGGAGGGCTAGTTGG+TGG | 0.563074 | 3_3:+90453284 | None:intergenic |
| TGAACTATGTGATGCTGAAG+AGG | 0.563744 | 3_3:+90453187 | None:intergenic |
| ATAGTCATTCTAGAAGGATG+AGG | 0.566210 | 3_3:-90453862 | Msa0482870:CDS |
| AATGGAAGCATGCATGCATG+CGG | 0.566902 | 3_3:-90451874 | Msa0482870:three_prime_UTR |
| TGTAGCTCAGTGATACGAGT+TGG | 0.568212 | 3_3:-90452922 | Msa0482870:three_prime_UTR |
| TCTATCTTAATACTCGTTGA+GGG | 0.569486 | 3_3:+90452897 | None:intergenic |
| CATACATTAAAAGATTCTTG+TGG | 0.570521 | 3_3:+90451321 | None:intergenic |
| CATTATAGAGTTCATTGAGG+TGG | 0.572559 | 3_3:+90452396 | None:intergenic |
| TAGTAGTTCGTTACGAGAGG+GGG | 0.574066 | 3_3:+90452841 | None:intergenic |
| TCAAATGCTTCCACTCCACC+CGG | 0.574131 | 3_3:+90454184 | None:intergenic |
| CATCATTATAGAGTTCATTG+AGG | 0.576538 | 3_3:+90452393 | None:intergenic |
| AAGTGGCAAAACTTGTGGAT+AGG | 0.577058 | 3_3:-90453157 | Msa0482870:CDS |
| CACACTATCAATTCATGAGA+AGG | 0.577184 | 3_3:+90452478 | None:intergenic |
| ATCAGGAAGTAAAGGATGGT+GGG | 0.580568 | 3_3:-90453798 | Msa0482870:CDS |
| ATGGAATTAGCAAGAAGGGT+AGG | 0.583335 | 3_3:-90453434 | Msa0482870:CDS |
| CTATGGTATCCTTCCAACCA+TGG | 0.584707 | 3_3:+90454005 | None:intergenic |
| CATTTATTGGAAGTTAGGTG+TGG | 0.586770 | 3_3:-90452660 | Msa0482870:three_prime_UTR |
| AGCAATCAAATCTGGTGGCA+AGG | 0.587341 | 3_3:-90453726 | Msa0482870:CDS |
| CATCTCTTGCAACTTCCTGA+AGG | 0.592567 | 3_3:+90453132 | None:intergenic |
| ATTAGTAGTTCGTTACGAGA+GGG | 0.597722 | 3_3:+90452839 | None:intergenic |
| GTCTGAGTCTAACTCAGACT+CGG | 0.598165 | 3_3:-90453600 | Msa0482870:CDS |
| ATATGTGAATATGTGACTGC+AGG | 0.600579 | 3_3:-90452027 | Msa0482870:three_prime_UTR |
| AATCAGGAAGTAAAGGATGG+TGG | 0.603373 | 3_3:-90453799 | Msa0482870:CDS |
| TACTACAAGTATTCAAGGTG+AGG | 0.607107 | 3_3:-90451682 | Msa0482870:three_prime_UTR |
| GTACTGACTGCCTGAATGCG+TGG | 0.608889 | 3_3:+90452145 | None:intergenic |
| AAGGGTAGGACTTCAATTGG+AGG | 0.609288 | 3_3:-90453420 | Msa0482870:CDS |
| AGTCTTGAGCCACCCTACAA+AGG | 0.609787 | 3_3:-90453897 | Msa0482870:CDS |
| TAGTCATTCTAGAAGGATGA+GGG | 0.613006 | 3_3:-90453861 | Msa0482870:CDS |
| AGTCAGGCCAAAATTTCTGG+TGG | 0.613310 | 3_3:+90452631 | None:intergenic |
| GATTAGTAGTTCGTTACGAG+AGG | 0.614798 | 3_3:+90452838 | None:intergenic |
| TCAAATCAGGAAGTAAAGGA+TGG | 0.616909 | 3_3:-90453802 | Msa0482870:CDS |
| CATTTGTGGTCTGAAGACTT+GGG | 0.618302 | 3_3:-90453956 | Msa0482870:CDS |
| TACAGTCTATGATGTTGAGT+TGG | 0.618402 | 3_3:-90453348 | Msa0482870:CDS |
| AAGTCTTCAACGATCTCGGA+GGG | 0.622487 | 3_3:+90453273 | None:intergenic |
| CATTCAGGCAGTCAGTACAT+TGG | 0.626675 | 3_3:-90452140 | Msa0482870:three_prime_UTR |
| ATGATAGCAATCAAATCTGG+TGG | 0.634663 | 3_3:-90453731 | Msa0482870:CDS |
| GCTAGAGCAGCATCATCTGG+TGG | 0.637791 | 3_3:-90451795 | Msa0482870:three_prime_UTR |
| AGTTCTATATTAATTGAACA+TGG | 0.639154 | 3_3:+90452248 | None:intergenic |
| GTCAGGCCAAAATTTCTGGT+GGG | 0.640816 | 3_3:+90452632 | None:intergenic |
| GATCTCATAATTCAAGTAAG+GGG | 0.642036 | 3_3:-90454633 | Msa0482870:CDS |
| TTAATAGAAGGGATTAAGCA+CGG | 0.642674 | 3_3:+90452870 | None:intergenic |
| GTCTGAGTTAGACTCAGACT+CGG | 0.643618 | 3_3:+90453604 | None:intergenic |
| TCTAAGAATGAAGCTTGCTG+AGG | 0.644686 | 3_3:-90451610 | Msa0482870:three_prime_UTR |
| AAAGCATTGCTTACAACACA+TGG | 0.648620 | 3_3:-90451744 | Msa0482870:three_prime_UTR |
| TTAGTAGTTCGTTACGAGAG+GGG | 0.659263 | 3_3:+90452840 | None:intergenic |
| CATAAGCATTTGGATAGCAG+GGG | 0.668690 | 3_3:+90454277 | None:intergenic |
| AAAGTCTTCAACGATCTCGG+AGG | 0.669614 | 3_3:+90453272 | None:intergenic |
| ACAAACTCACCTTTGTAGGG+TGG | 0.674969 | 3_3:+90453888 | None:intergenic |
| TCATTTGTATAAGAAAGTGA+AGG | 0.677583 | 3_3:+90453371 | None:intergenic |
| AAGTAGATATCTTCTTCACA+AGG | 0.678976 | 3_3:-90454610 | Msa0482870:intron |
| GGTGTCAGTGACAAATCATG+GGG | 0.687341 | 3_3:-90451196 | Msa0482870:three_prime_UTR |
| ACTGAATGAGTTCTAACAGG+AGG | 0.695061 | 3_3:+90452287 | None:intergenic |
| AGTAAGTCTTCAGACCACAA+AGG | 0.714285 | 3_3:-90453984 | Msa0482870:CDS |
| TGGTATCCTTCCAACCATGG+AGG | 0.717381 | 3_3:+90454008 | None:intergenic |
| TGGTGATGAGATGAATCAGG+AGG | 0.725233 | 3_3:+90454229 | None:intergenic |
| TATTAATAGATCATTCACTG+TGG | 0.782652 | 3_3:+90453394 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTAAATTTATTTTTTCTAT+AGG | - | chr3_3:90451817-90451836 | Msa0482870:three_prime_UTR | 10.0% |
| !! | AAAAAATTATATACTTATGA+AGG | + | chr3_3:90452862-90452881 | None:intergenic | 10.0% |
| !!! | AAGTATATAATTTTTTACTT+TGG | - | chr3_3:90452866-90452885 | Msa0482870:three_prime_UTR | 10.0% |
| !!! | AAATACAATAAACATTTTAT+AGG | + | chr3_3:90454213-90454232 | None:intergenic | 10.0% |
| !!! | TAATTTAAGTTTTTTTTTCA+AGG | - | chr3_3:90454880-90454899 | Msa0482870:intron | 10.0% |
| !! | CTCAAAATTATTATTATTAT+AGG | + | chr3_3:90455924-90455943 | None:intergenic | 10.0% |
| !!! | CTATAATAATAATAATTTTG+AGG | - | chr3_3:90455922-90455941 | Msa0482870:intron | 10.0% |
| !! | TATTAAATATCCTTTCAATT+CGG | - | chr3_3:90451672-90451691 | Msa0482870:three_prime_UTR | 15.0% |
| !! | ATAATAATAGTAGCTTAAAT+AGG | + | chr3_3:90451995-90452014 | None:intergenic | 15.0% |
| !! | ATAATAAATATTCTTCATCT+TGG | - | chr3_3:90452228-90452247 | Msa0482870:three_prime_UTR | 15.0% |
| !!! | ATTTTTACCAAGTTATAAAA+TGG | + | chr3_3:90454248-90454267 | None:intergenic | 15.0% |
| !!! | TTGAATAAGACAATATTTTA+AGG | + | chr3_3:90454523-90454542 | None:intergenic | 15.0% |
| !!! | AATTTACTAAGCATTTTTTT+AGG | + | chr3_3:90455711-90455730 | None:intergenic | 15.0% |
| !! | ATATTTAATACATTAGAGTG+CGG | + | chr3_3:90451662-90451681 | None:intergenic | 20.0% |
| !! | ATTAAATATCCTTTCAATTC+GGG | - | chr3_3:90451673-90451692 | Msa0482870:three_prime_UTR | 20.0% |
| !!! | AGTAATGTAATTTTAGAGAA+TGG | + | chr3_3:90451849-90451868 | None:intergenic | 20.0% |
| !! | TAAAATGTCAAAATCACTTA+AGG | - | chr3_3:90451885-90451904 | Msa0482870:three_prime_UTR | 20.0% |
| !!! | ATTTTCTTTTACTATCTGTA+AGG | - | chr3_3:90452267-90452286 | Msa0482870:three_prime_UTR | 20.0% |
| !! | CAAAATTAAACAATCCAATA+AGG | + | chr3_3:90452495-90452514 | None:intergenic | 20.0% |
| !! | AAACATGTAAAGAAAAAAAG+TGG | - | chr3_3:90454424-90454443 | Msa0482870:intron | 20.0% |
| !!! | ATACTTCACTTTCAAATTTT+AGG | - | chr3_3:90454460-90454479 | Msa0482870:intron | 20.0% |
| !!! | TTGTCTTATTCAACATTTAT+TGG | - | chr3_3:90454530-90454549 | Msa0482870:intron | 20.0% |
| !! | AGTTCTATATTAATTGAACA+TGG | + | chr3_3:90454958-90454977 | None:intergenic | 20.0% |
| !! | AACTAATAGAAATTAGACTA+TGG | - | chr3_3:90454974-90454993 | Msa0482870:intron | 20.0% |
| !!! | AAGGCATTATTATAATGATT+TGG | - | chr3_3:90455015-90455034 | Msa0482870:intron | 20.0% |
| !!! | TTTTTTAATTTGAATCATGC+AGG | - | chr3_3:90455239-90455258 | Msa0482870:intron | 20.0% |
| !! | AAAAAATGCTTAGTAAATTG+TGG | - | chr3_3:90455712-90455731 | Msa0482870:intron | 20.0% |
| !!! | TTAGTTTTTTCATGTTTGTA+AGG | - | chr3_3:90455785-90455804 | Msa0482870:intron | 20.0% |
| !!! | TAGTTTTTTCATGTTTGTAA+GGG | - | chr3_3:90455786-90455805 | Msa0482870:intron | 20.0% |
| ! | ATGAAAGAACTTTCAATAGA+GGG | - | chr3_3:90451206-90451225 | Msa0482870:three_prime_UTR | 25.0% |
| ! | GAGAATTCATCCAATAATTT+AGG | + | chr3_3:90451235-90451254 | None:intergenic | 25.0% |
| !! | TACATGACATCTTAAGATTT+TGG | - | chr3_3:90451292-90451311 | Msa0482870:three_prime_UTR | 25.0% |
| !!! | TTAAGATTTTGGTTAAGATG+CGG | - | chr3_3:90451303-90451322 | Msa0482870:three_prime_UTR | 25.0% |
| ! | CAAATTATACACTAAAACAG+TGG | + | chr3_3:90451382-90451401 | None:intergenic | 25.0% |
| !! | AGCATGTGTTTTATAAAAAG+TGG | - | chr3_3:90451421-90451440 | Msa0482870:three_prime_UTR | 25.0% |
| !!! | TTCTAGTTTAACTAAGGTTT+TGG | + | chr3_3:90451548-90451567 | None:intergenic | 25.0% |
| !! | ACCATGATATAAAAGTATAG+AGG | - | chr3_3:90451729-90451748 | Msa0482870:three_prime_UTR | 25.0% |
| !! | TCCTCTATACTTTTATATCA+TGG | + | chr3_3:90451733-90451752 | None:intergenic | 25.0% |
| ! | AGGAAAGATGAAAGAATAAT+AGG | - | chr3_3:90451771-90451790 | Msa0482870:three_prime_UTR | 25.0% |
| ! | GGAAAGATGAAAGAATAATA+GGG | - | chr3_3:90451772-90451791 | Msa0482870:three_prime_UTR | 25.0% |
| ! | GTTATAACTATTTGACTGAA+TGG | - | chr3_3:90451907-90451926 | Msa0482870:three_prime_UTR | 25.0% |
| ! | TAATAGTAGCTTAAATAGGT+AGG | + | chr3_3:90451991-90452010 | None:intergenic | 25.0% |
| ! | AAGCAAAGATAGAATTTCTT+TGG | + | chr3_3:90452093-90452112 | None:intergenic | 25.0% |
| ! | TGATCTCATAATTCAAGTAA+GGG | - | chr3_3:90452569-90452588 | Msa0482870:three_prime_UTR | 25.0% |
| ! | ACTAATATGACACATTGATA+CGG | + | chr3_3:90452791-90452810 | None:intergenic | 25.0% |
| ! | TGAAAATTTATGCATCTAGA+TGG | - | chr3_3:90453527-90453546 | Msa0482870:CDS | 25.0% |
| ! | TTACCAAATATTTCCAAGAA+CGG | - | chr3_3:90453550-90453569 | Msa0482870:CDS | 25.0% |
| ! | TATTAATAGATCATTCACTG+TGG | + | chr3_3:90453812-90453831 | None:intergenic | 25.0% |
| ! | TCATTTGTATAAGAAAGTGA+AGG | + | chr3_3:90453835-90453854 | None:intergenic | 25.0% |
| ! | ACATAGTTCAAAATTGAAAG+TGG | - | chr3_3:90454029-90454048 | Msa0482870:CDS | 25.0% |
| ! | TGGTAAAAATATATCTCAGA+TGG | - | chr3_3:90454258-90454277 | Msa0482870:CDS | 25.0% |
| !!! | TATGTGTGTTTTTTCTTTAC+AGG | + | chr3_3:90454402-90454421 | None:intergenic | 25.0% |
| ! | TTCAACATTTATTGGAAGTT+AGG | - | chr3_3:90454538-90454557 | Msa0482870:intron | 25.0% |
| ! | AGATAATTTCATAACCCATT+TGG | - | chr3_3:90454634-90454653 | Msa0482870:CDS | 25.0% |
| ! | CTAAAGAGTGAATTCATAAA+TGG | + | chr3_3:90454780-90454799 | None:intergenic | 25.0% |
| !!! | GAAGAAAAATTTCTAGCATA+AGG | - | chr3_3:90454996-90455015 | Msa0482870:intron | 25.0% |
| ! | CATGATGAATTTGATGAAAA+TGG | - | chr3_3:90455618-90455637 | Msa0482870:intron | 25.0% |
| ! | TGAATTTGATGAAAATGGTT+TGG | - | chr3_3:90455623-90455642 | Msa0482870:intron | 25.0% |
| ! | CATACATTAAAAGATTCTTG+TGG | + | chr3_3:90455885-90455904 | None:intergenic | 25.0% |
| !! | AATCTTTTAATGTATGTGCA+TGG | - | chr3_3:90455889-90455908 | Msa0482870:intron | 25.0% |
| !!! | TGAAAAGTTGATATAGGAAT+AGG | - | chr3_3:90455977-90455996 | Msa0482870:intron | 25.0% |
| GATGAAAGAACTTTCAATAG+AGG | - | chr3_3:90451205-90451224 | Msa0482870:three_prime_UTR | 30.0% | |
| TGAAAGAACTTTCAATAGAG+GGG | - | chr3_3:90451207-90451226 | Msa0482870:three_prime_UTR | 30.0% | |
| TTATTGGATGAATTCTCACA+CGG | - | chr3_3:90451238-90451257 | Msa0482870:three_prime_UTR | 30.0% | |
| ATTATACACTAAAACAGTGG+AGG | + | chr3_3:90451379-90451398 | None:intergenic | 30.0% | |
| GAGTCTCACTTAAAAGATTA+TGG | + | chr3_3:90451462-90451481 | None:intergenic | 30.0% | |
| !! | TCTTTTAAGTGAGACTCAAA+TGG | - | chr3_3:90451465-90451484 | Msa0482870:three_prime_UTR | 30.0% |
| !! | GATCTCTTCTAGTTTAACTA+AGG | + | chr3_3:90451554-90451573 | None:intergenic | 30.0% |
| TAAATACAACCCGAATTGAA+AGG | + | chr3_3:90451685-90451704 | None:intergenic | 30.0% | |
| !! | TTCAATTCGGGTTGTATTTA+TGG | - | chr3_3:90451685-90451704 | Msa0482870:three_prime_UTR | 30.0% |
| GAGAGTTAAAAGTGAAAACT+AGG | - | chr3_3:90451751-90451770 | Msa0482870:three_prime_UTR | 30.0% | |
| ! | TGTATAATTTGCAAGAGGAA+AGG | + | chr3_3:90452056-90452075 | None:intergenic | 30.0% |
| CAAAGATAGAATTTCTTTGG+TGG | + | chr3_3:90452090-90452109 | None:intergenic | 30.0% | |
| TTACCACATGATTTAGAAGA+AGG | - | chr3_3:90452343-90452362 | Msa0482870:three_prime_UTR | 30.0% | |
| TTACCTTCTTCTAAATCATG+TGG | + | chr3_3:90452349-90452368 | None:intergenic | 30.0% | |
| TCCAAGTTTCATAAACTTCA+TGG | + | chr3_3:90452383-90452402 | None:intergenic | 30.0% | |
| ! | GTTCTTTTCTTTGTATATGC+AGG | - | chr3_3:90452523-90452542 | Msa0482870:three_prime_UTR | 30.0% |
| GTGATCTCATAATTCAAGTA+AGG | - | chr3_3:90452568-90452587 | Msa0482870:three_prime_UTR | 30.0% | |
| GATCTCATAATTCAAGTAAG+GGG | - | chr3_3:90452570-90452589 | Msa0482870:three_prime_UTR | 30.0% | |
| AAGTAGATATCTTCTTCACA+AGG | - | chr3_3:90452593-90452612 | Msa0482870:three_prime_UTR | 30.0% | |
| !! | TGTCATATTAGTGTTGTTTC+TGG | - | chr3_3:90452799-90452818 | Msa0482870:three_prime_UTR | 30.0% |
| AATCAGGAAGTTGAACTATT+TGG | + | chr3_3:90452997-90453016 | None:intergenic | 30.0% | |
| TTTCAACTTCTTCAGTCATT+TGG | + | chr3_3:90453129-90453148 | None:intergenic | 30.0% | |
| ATGACTGAAGAAGTTGAAAA+AGG | - | chr3_3:90453130-90453149 | Msa0482870:CDS | 30.0% | |
| GAAAGTTTGAGAATCAAATC+AGG | - | chr3_3:90453388-90453407 | Msa0482870:CDS | 30.0% | |
| AGAATCAAATCAGGAAGTAA+AGG | - | chr3_3:90453397-90453416 | Msa0482870:CDS | 30.0% | |
| AACTTAGCATAGACCTTTAT+TGG | - | chr3_3:90453443-90453462 | Msa0482870:CDS | 30.0% | |
| CTATCATTGTTCTCCAATAA+AGG | + | chr3_3:90453459-90453478 | None:intergenic | 30.0% | |
| ACAATGATAGCAATCAAATC+TGG | - | chr3_3:90453469-90453488 | Msa0482870:CDS | 30.0% | |
| TTTCCGTTCTTGGAAATATT+TGG | + | chr3_3:90453556-90453575 | None:intergenic | 30.0% | |
| !! | TGAAGAAGCATTGAGAATAT+TGG | + | chr3_3:90453740-90453759 | None:intergenic | 30.0% |
| AAAGATGGAATTAGCAAGAA+GGG | - | chr3_3:90453765-90453784 | Msa0482870:CDS | 30.0% | |
| ACTTTGAATTACAAGAGAGT+AGG | - | chr3_3:90453989-90454008 | Msa0482870:CDS | 30.0% | |
| TGATCATATCTTGCAAATTC+TGG | + | chr3_3:90454141-90454160 | None:intergenic | 30.0% | |
| TACCTTGAGATAAATGTCAA+TGG | + | chr3_3:90454181-90454200 | None:intergenic | 30.0% | |
| ! | AGTCACTCCATTTTATAACT+TGG | - | chr3_3:90454238-90454257 | Msa0482870:CDS | 30.0% |
| TCTATCTTAATACTCGTTGA+GGG | + | chr3_3:90454309-90454328 | None:intergenic | 30.0% | |
| TTAATAGAAGGGATTAAGCA+CGG | + | chr3_3:90454336-90454355 | None:intergenic | 30.0% | |
| AGGATATGAAACAGAATTAG+TGG | - | chr3_3:90454480-90454499 | Msa0482870:intron | 30.0% | |
| !!! | TATTTTAAGGTCAAGAGAGT+TGG | + | chr3_3:90454510-90454529 | None:intergenic | 30.0% |
| CAACTATATCAGTCAAGATA+AGG | + | chr3_3:90454602-90454621 | None:intergenic | 30.0% | |
| CATCATTATAGAGTTCATTG+AGG | + | chr3_3:90454813-90454832 | None:intergenic | 30.0% | |
| ATTAATTGAACATGGTAGCT+CGG | + | chr3_3:90454950-90454969 | None:intergenic | 30.0% | |
| ! | AAATATGGACAGACGAATTT+TGG | + | chr3_3:90455100-90455119 | None:intergenic | 30.0% |
| AAAATAGCGAGCTTGAAATA+TGG | + | chr3_3:90455115-90455134 | None:intergenic | 30.0% | |
| CTTGAACAACAACTCTTAAA+GGG | + | chr3_3:90455371-90455390 | None:intergenic | 30.0% | |
| ACTTGAACAACAACTCTTAA+AGG | + | chr3_3:90455372-90455391 | None:intergenic | 30.0% | |
| !! | TGTGTTGTTGTATGTTTTGA+TGG | + | chr3_3:90455492-90455511 | None:intergenic | 30.0% |
| !! | AGAGTTGAAGACTTTGATTT+TGG | + | chr3_3:90455576-90455595 | None:intergenic | 30.0% |
| !! | AATGGTTTGGTAAATGATGA+TGG | - | chr3_3:90455636-90455655 | Msa0482870:intron | 30.0% |
| !! | TTGGTAAATGATGATGGAAT+TGG | - | chr3_3:90455642-90455661 | Msa0482870:intron | 30.0% |
| !!! | AGCATTTTTTTAGGTTGTGT+AGG | + | chr3_3:90455702-90455721 | None:intergenic | 30.0% |
| TGTTTGTAAGGGTAATTTAG+AGG | - | chr3_3:90455797-90455816 | Msa0482870:intron | 30.0% | |
| GTTTGTAAGGGTAATTTAGA+GGG | - | chr3_3:90455798-90455817 | Msa0482870:intron | 30.0% | |
| !! | ATTTTGAGGGAAAATCTCTT+TGG | - | chr3_3:90455936-90455955 | Msa0482870:intron | 30.0% |
| !! | GTGTCATGAAAAGTTGATAT+AGG | - | chr3_3:90455971-90455990 | Msa0482870:intron | 30.0% |
| GATATAGGAATAGGAATCTT+TGG | - | chr3_3:90455986-90456005 | Msa0482870:intron | 30.0% | |
| TAGAGGGGATCCTAAATTAT+TGG | - | chr3_3:90451222-90451241 | Msa0482870:three_prime_UTR | 35.0% | |
| ATATGAACAAGCAGACAAGT+AGG | + | chr3_3:90451342-90451361 | None:intergenic | 35.0% | |
| TTAAGTGAGACTCAAATGGA+CGG | - | chr3_3:90451469-90451488 | Msa0482870:three_prime_UTR | 35.0% | |
| TTGGATTCGAATCCAATCTT+TGG | + | chr3_3:90451529-90451548 | None:intergenic | 35.0% | |
| TCATTTCATCTAAGCGTTCT+TGG | - | chr3_3:90451578-90451597 | Msa0482870:three_prime_UTR | 35.0% | |
| CATTTCATCTAAGCGTTCTT+GGG | - | chr3_3:90451579-90451598 | Msa0482870:three_prime_UTR | 35.0% | |
| TGACTGAATGGACATAACTT+AGG | - | chr3_3:90451919-90451938 | Msa0482870:three_prime_UTR | 35.0% | |
| GGTAGGATAGATGACATTAA+TGG | + | chr3_3:90451974-90451993 | None:intergenic | 35.0% | |
| AATTTGCAAGAGGAAAGGAA+AGG | + | chr3_3:90452051-90452070 | None:intergenic | 35.0% | |
| ! | GAAGGTGTATAATTTGCAAG+AGG | + | chr3_3:90452061-90452080 | None:intergenic | 35.0% |
| TCTACACTGAATTATGCAAG+TGG | - | chr3_3:90452309-90452328 | Msa0482870:three_prime_UTR | 35.0% | |
| GCCATGAAGTTTATGAAACT+TGG | - | chr3_3:90452379-90452398 | Msa0482870:three_prime_UTR | 35.0% | |
| !! | TCTGAAGTGTAGAAAGTATC+TGG | + | chr3_3:90452412-90452431 | None:intergenic | 35.0% |
| TCTACACTTCAGAAGCTATA+AGG | - | chr3_3:90452419-90452438 | Msa0482870:three_prime_UTR | 35.0% | |
| !! | TTGATGATGCATCTCCTTAT+TGG | - | chr3_3:90452478-90452497 | Msa0482870:three_prime_UTR | 35.0% |
| ACGTATTGTTACATTTGGGA+AGG | - | chr3_3:90452742-90452761 | Msa0482870:three_prime_UTR | 35.0% | |
| CACAAACACAAATGCAAACA+CGG | + | chr3_3:90452828-90452847 | None:intergenic | 35.0% | |
| ATTTGTGTTTGTGTCTGTGT+CGG | - | chr3_3:90452835-90452854 | Msa0482870:three_prime_UTR | 35.0% | |
| ATTCTGAGCATAATCTTTGC+AGG | + | chr3_3:90452952-90452971 | None:intergenic | 35.0% | |
| !! | ATTTGGTGATGAGATGAATC+AGG | + | chr3_3:90452980-90452999 | None:intergenic | 35.0% |
| ! | AGTTCAACTTCCTGATTTTC+CGG | - | chr3_3:90453000-90453019 | Msa0482870:CDS | 35.0% |
| AAACTTGATTCACAAGCTTG+AGG | - | chr3_3:90453153-90453172 | Msa0482870:CDS | 35.0% | |
| AATAGTTTCAATGCATCTGC+TGG | + | chr3_3:90453278-90453297 | None:intergenic | 35.0% | |
| TGTCACATAGTCATTCTAGA+AGG | - | chr3_3:90453335-90453354 | Msa0482870:CDS | 35.0% | |
| ! | ATAGTCATTCTAGAAGGATG+AGG | - | chr3_3:90453341-90453360 | Msa0482870:CDS | 35.0% |
| ! | TAGTCATTCTAGAAGGATGA+GGG | - | chr3_3:90453342-90453361 | Msa0482870:CDS | 35.0% |
| TCAAATCAGGAAGTAAAGGA+TGG | - | chr3_3:90453401-90453420 | Msa0482870:CDS | 35.0% | |
| ATGATAGCAATCAAATCTGG+TGG | - | chr3_3:90453472-90453491 | Msa0482870:CDS | 35.0% | |
| AAGGTTCCTTCAAATCTCAT+TGG | - | chr3_3:90453496-90453515 | Msa0482870:CDS | 35.0% | |
| CTTCTTTCTATTTCCGTTCT+TGG | + | chr3_3:90453566-90453585 | None:intergenic | 35.0% | |
| !! | ATGCTTTGAAGTTATTTCGC+TGG | + | chr3_3:90453629-90453648 | None:intergenic | 35.0% |
| GCGAAATAACTTCAAAGCAT+AGG | - | chr3_3:90453629-90453648 | Msa0482870:CDS | 35.0% | |
| TGCTTCTTCATCTTCAAAGA+TGG | - | chr3_3:90453750-90453769 | Msa0482870:CDS | 35.0% | |
| CAAAGATGGAATTAGCAAGA+AGG | - | chr3_3:90453764-90453783 | Msa0482870:CDS | 35.0% | |
| TACAGTCTATGATGTTGAGT+TGG | - | chr3_3:90453855-90453874 | Msa0482870:CDS | 35.0% | |
| !! | TGAGTTGGTGATGACTATAT+TGG | - | chr3_3:90453870-90453889 | Msa0482870:CDS | 35.0% |
| TTGGAACAGTTCATGTTACA+AGG | - | chr3_3:90453889-90453908 | Msa0482870:CDS | 35.0% | |
| TCAAAAGTCTTCAACGATCT+CGG | + | chr3_3:90453937-90453956 | None:intergenic | 35.0% | |
| !! | CGTTGAAGACTTTTGAAAGA+AGG | - | chr3_3:90453941-90453960 | Msa0482870:CDS | 35.0% |
| !! | TGAAGACTTTTGAAAGAAGG+CGG | - | chr3_3:90453944-90453963 | Msa0482870:CDS | 35.0% |
| TTGAATTACAAGAGAGTAGG+AGG | - | chr3_3:90453992-90454011 | Msa0482870:CDS | 35.0% | |
| ATTGAAAGTGGCAAAACTTG+TGG | - | chr3_3:90454041-90454060 | Msa0482870:CDS | 35.0% | |
| AGCCATTGACATTTATCTCA+AGG | - | chr3_3:90454176-90454195 | Msa0482870:CDS | 35.0% | |
| CTCTATCTTAATACTCGTTG+AGG | + | chr3_3:90454310-90454329 | None:intergenic | 35.0% | |
| CTCAACGAGTATTAAGATAG+AGG | - | chr3_3:90454308-90454327 | Msa0482870:intron | 35.0% | |
| ATTAGTAGTTCGTTACGAGA+GGG | + | chr3_3:90454367-90454386 | None:intergenic | 35.0% | |
| CATTTATTGGAAGTTAGGTG+TGG | - | chr3_3:90454543-90454562 | Msa0482870:intron | 35.0% | |
| !!! | CTTCACGTTTTTAGCCAAAT+GGG | + | chr3_3:90454651-90454670 | None:intergenic | 35.0% |
| !!! | TCTTCACGTTTTTAGCCAAA+TGG | + | chr3_3:90454652-90454671 | None:intergenic | 35.0% |
| ! | ACATAGTACTGGAACTATGA+TGG | + | chr3_3:90454705-90454724 | None:intergenic | 35.0% |
| CACACTATCAATTCATGAGA+AGG | + | chr3_3:90454728-90454747 | None:intergenic | 35.0% | |
| CATTATAGAGTTCATTGAGG+TGG | + | chr3_3:90454810-90454829 | None:intergenic | 35.0% | |
| ATATGTGAATATGTGACTGC+AGG | - | chr3_3:90455176-90455195 | Msa0482870:intron | 35.0% | |
| !! | AAAGCATTGCTTACAACACA+TGG | - | chr3_3:90455459-90455478 | Msa0482870:intron | 35.0% |
| AGCTCTACTACAAGTATTCA+AGG | - | chr3_3:90455516-90455535 | Msa0482870:intron | 35.0% | |
| TACTACAAGTATTCAAGGTG+AGG | - | chr3_3:90455521-90455540 | Msa0482870:intron | 35.0% | |
| GTATTCAAGGTGAGGATAAT+TGG | - | chr3_3:90455529-90455548 | Msa0482870:intron | 35.0% | |
| ! | CAAAAAGCCTTGTAACTTGT+AGG | - | chr3_3:90455854-90455873 | Msa0482870:intron | 35.0% |
| ! | GGATTTTCCTACAAGTTACA+AGG | + | chr3_3:90455864-90455883 | None:intergenic | 35.0% |
| TTTCTTTGGTGGAGAGAAGA+AGG | + | chr3_3:90452079-90452098 | None:intergenic | 40.0% | |
| ! | ATACACTCTGAGAACACTGT+CGG | - | chr3_3:90452166-90452185 | Msa0482870:three_prime_UTR | 40.0% |
| ! | ATTTGCTAAGCAAGCTCAAG+TGG | + | chr3_3:90452210-90452229 | None:intergenic | 40.0% |
| TTACTATCTGTAAGGTGCAC+TGG | - | chr3_3:90452275-90452294 | Msa0482870:three_prime_UTR | 40.0% | |
| ! | GTACTGACGCTTCAAATTGA+AGG | - | chr3_3:90452688-90452707 | Msa0482870:three_prime_UTR | 40.0% |
| CCAAATGTAACAATACGTGC+CGG | + | chr3_3:90452740-90452759 | None:intergenic | 40.0% | |
| CGGCACGTATTGTTACATTT+GGG | - | chr3_3:90452738-90452757 | Msa0482870:three_prime_UTR | 40.0% | |
| CATAAGCATTTGGATAGCAG+GGG | + | chr3_3:90452929-90452948 | None:intergenic | 40.0% | |
| GCATAAGCATTTGGATAGCA+GGG | + | chr3_3:90452930-90452949 | None:intergenic | 40.0% | |
| TCTTTGCAGGCATAAGCATT+TGG | + | chr3_3:90452939-90452958 | None:intergenic | 40.0% | |
| ! | GTTCAACTTCCTGATTTTCC+GGG | - | chr3_3:90453001-90453020 | Msa0482870:CDS | 40.0% |
| TTGTGTGCTAAGTTCTGCTA+TGG | - | chr3_3:90453043-90453062 | Msa0482870:CDS | 40.0% | |
| CTTGCAGCTACAATGTTGTA+AGG | + | chr3_3:90453088-90453107 | None:intergenic | 40.0% | |
| TTCAATTCTTGCATCCTCCA+TGG | - | chr3_3:90453181-90453200 | Msa0482870:CDS | 40.0% | |
| TGTGGTCTGAAGACTTACTA+TGG | + | chr3_3:90453218-90453237 | None:intergenic | 40.0% | |
| AGTAAGTCTTCAGACCACAA+AGG | - | chr3_3:90453219-90453238 | Msa0482870:CDS | 40.0% | |
| CATTTGTGGTCTGAAGACTT+GGG | - | chr3_3:90453247-90453266 | Msa0482870:CDS | 40.0% | |
| GTGACAAACTCACCTTTGTA+GGG | + | chr3_3:90453321-90453340 | None:intergenic | 40.0% | |
| TGTGACAAACTCACCTTTGT+AGG | + | chr3_3:90453322-90453341 | None:intergenic | 40.0% | |
| AATCAGGAAGTAAAGGATGG+TGG | - | chr3_3:90453404-90453423 | Msa0482870:CDS | 40.0% | |
| ATCAGGAAGTAAAGGATGGT+GGG | - | chr3_3:90453405-90453424 | Msa0482870:CDS | 40.0% | |
| GCATCACCAATGAGATTTGA+AGG | + | chr3_3:90453505-90453524 | None:intergenic | 40.0% | |
| TTCAAAGCATAGGCTGCTAT+TGG | - | chr3_3:90453639-90453658 | Msa0482870:CDS | 40.0% | |
| ! | AGCTTGCTTCCAACTGAAAA+AGG | - | chr3_3:90453673-90453692 | Msa0482870:CDS | 40.0% |
| !!! | GAAACAGCACCTTTTTCAGT+TGG | + | chr3_3:90453685-90453704 | None:intergenic | 40.0% |
| ATGGAATTAGCAAGAAGGGT+AGG | - | chr3_3:90453769-90453788 | Msa0482870:CDS | 40.0% | |
| AAGAAGGGTAGGACTTCAAT+TGG | - | chr3_3:90453780-90453799 | Msa0482870:CDS | 40.0% | |
| TGAACTATGTGATGCTGAAG+AGG | + | chr3_3:90454019-90454038 | None:intergenic | 40.0% | |
| AAGTGGCAAAACTTGTGGAT+AGG | - | chr3_3:90454046-90454065 | Msa0482870:CDS | 40.0% | |
| GGGGGAAATCGTTAATAGAA+GGG | + | chr3_3:90454347-90454366 | None:intergenic | 40.0% | |
| AGGGGGAAATCGTTAATAGA+AGG | + | chr3_3:90454348-90454367 | None:intergenic | 40.0% | |
| TTAGTAGTTCGTTACGAGAG+GGG | + | chr3_3:90454366-90454385 | None:intergenic | 40.0% | |
| GATTAGTAGTTCGTTACGAG+AGG | + | chr3_3:90454368-90454387 | None:intergenic | 40.0% | |
| TCATGAGAAGGACATAGTAC+TGG | + | chr3_3:90454716-90454735 | None:intergenic | 40.0% | |
| GAGTTCATTGAGGTGGAAAT+TGG | + | chr3_3:90454803-90454822 | None:intergenic | 40.0% | |
| ! | ACTGAATGAGTTCTAACAGG+AGG | + | chr3_3:90454919-90454938 | None:intergenic | 40.0% |
| ! | GACACTGAATGAGTTCTAAC+AGG | + | chr3_3:90454922-90454941 | None:intergenic | 40.0% |
| CTTTCACTCTTGTTGAGTTC+TGG | + | chr3_3:90455270-90455289 | None:intergenic | 40.0% | |
| CAGAACTCAACAAGAGTGAA+AGG | - | chr3_3:90455268-90455287 | Msa0482870:intron | 40.0% | |
| TGACTGCAAAAAGCTCTCAA+TGG | - | chr3_3:90455311-90455330 | Msa0482870:intron | 40.0% | |
| ! | GAGGATAATTGGAGTGTTTC+TGG | - | chr3_3:90455540-90455559 | Msa0482870:intron | 40.0% |
| !! | TCTAAGAATGAAGCTTGCTG+AGG | - | chr3_3:90455593-90455612 | Msa0482870:intron | 40.0% |
| ! | TTGTGTAGGAAGAGCACAAA+TGG | + | chr3_3:90455688-90455707 | None:intergenic | 40.0% |
| !! | TTGGTGTCAGTGACAAATCA+TGG | - | chr3_3:90456005-90456024 | Msa0482870:intron | 40.0% |
| ! | TGGTGTCAGTGACAAATCAT+GGG | - | chr3_3:90456006-90456025 | Msa0482870:intron | 40.0% |
| CAGTGGAGGAACATCACATT+GGG | + | chr3_3:90451365-90451384 | None:intergenic | 45.0% | |
| ACAGTGGAGGAACATCACAT+TGG | + | chr3_3:90451366-90451385 | None:intergenic | 45.0% | |
| CGTTGCTACATGCCAAAGAT+TGG | - | chr3_3:90451514-90451533 | Msa0482870:three_prime_UTR | 45.0% | |
| ! | AGAGGCTTTGTAGTTGTAGG+AGG | + | chr3_3:90452022-90452041 | None:intergenic | 45.0% |
| ! | GGAAGAGGCTTTGTAGTTGT+AGG | + | chr3_3:90452025-90452044 | None:intergenic | 45.0% |
| GGAAAGGAAAGGTAAGGAAG+AGG | + | chr3_3:90452040-90452059 | None:intergenic | 45.0% | |
| GCAAGAGGAAAGGAAAGGTA+AGG | + | chr3_3:90452046-90452065 | None:intergenic | 45.0% | |
| CAGTGTTCTCAGAGTGTATG+AGG | + | chr3_3:90452165-90452184 | None:intergenic | 45.0% | |
| CCGGCACGTATTGTTACATT+TGG | - | chr3_3:90452737-90452756 | Msa0482870:three_prime_UTR | 45.0% | |
| GGCATAAGCATTTGGATAGC+AGG | + | chr3_3:90452931-90452950 | None:intergenic | 45.0% | |
| ! | TGGTGATGAGATGAATCAGG+AGG | + | chr3_3:90452977-90452996 | None:intergenic | 45.0% |
| ATTCTTGCATCCTCCATGGT+TGG | - | chr3_3:90453185-90453204 | Msa0482870:CDS | 45.0% | |
| CTATGGTATCCTTCCAACCA+TGG | + | chr3_3:90453201-90453220 | None:intergenic | 45.0% | |
| CCACAAATGCAACACCTTTG+TGG | + | chr3_3:90453236-90453255 | None:intergenic | 45.0% | |
| !! | CCACAAAGGTGTTGCATTTG+TGG | - | chr3_3:90453233-90453252 | Msa0482870:CDS | 45.0% |
| GCATTTGTGGTCTGAAGACT+TGG | - | chr3_3:90453246-90453265 | Msa0482870:CDS | 45.0% | |
| ACAAACTCACCTTTGTAGGG+TGG | + | chr3_3:90453318-90453337 | None:intergenic | 45.0% | |
| AGCAATCAAATCTGGTGGCA+AGG | - | chr3_3:90453477-90453496 | Msa0482870:CDS | 45.0% | |
| GTCTGAGTTAGACTCAGACT+CGG | + | chr3_3:90453602-90453621 | None:intergenic | 45.0% | |
| GTCTGAGTCTAACTCAGACT+CGG | - | chr3_3:90453603-90453622 | Msa0482870:CDS | 45.0% | |
| AAGGGTAGGACTTCAATTGG+AGG | - | chr3_3:90453783-90453802 | Msa0482870:CDS | 45.0% | |
| AAGTCTTCAACGATCTCGGA+GGG | + | chr3_3:90453933-90453952 | None:intergenic | 45.0% | |
| AAAGTCTTCAACGATCTCGG+AGG | + | chr3_3:90453934-90453953 | None:intergenic | 45.0% | |
| ACTTGTGGATAGGTACCTTC+AGG | - | chr3_3:90454056-90454075 | Msa0482870:CDS | 45.0% | |
| CATCTCTTGCAACTTCCTGA+AGG | + | chr3_3:90454074-90454093 | None:intergenic | 45.0% | |
| TGTAGCTCAGTGATACGAGT+TGG | - | chr3_3:90454281-90454300 | Msa0482870:CDS | 45.0% | |
| GTAGCTCAGTGATACGAGTT+GGG | - | chr3_3:90454282-90454301 | Msa0482870:CDS | 45.0% | |
| TAGTAGTTCGTTACGAGAGG+GGG | + | chr3_3:90454365-90454384 | None:intergenic | 45.0% | |
| ! | GACTGACCCACCAGAAATTT+TGG | - | chr3_3:90454565-90454584 | Msa0482870:intron | 45.0% |
| !! | GTCAGGCCAAAATTTCTGGT+GGG | + | chr3_3:90454574-90454593 | None:intergenic | 45.0% |
| ! | AGTCAGGCCAAAATTTCTGG+TGG | + | chr3_3:90454575-90454594 | None:intergenic | 45.0% |
| GTCAGTCAGGCCAAAATTTC+TGG | + | chr3_3:90454578-90454597 | None:intergenic | 45.0% | |
| GTCAAGATAAGGAGTCAGTC+AGG | + | chr3_3:90454591-90454610 | None:intergenic | 45.0% | |
| ! | TGAGTTCTAACAGGAGGTTC+TGG | + | chr3_3:90454913-90454932 | None:intergenic | 45.0% |
| GTCACAAATTCCACGCATTC+AGG | - | chr3_3:90455048-90455067 | Msa0482870:intron | 45.0% | |
| CATTCAGGCAGTCAGTACAT+TGG | - | chr3_3:90455063-90455082 | Msa0482870:intron | 45.0% | |
| ! | GTCAGTACATTGGTAGCTGT+TGG | - | chr3_3:90455073-90455092 | Msa0482870:intron | 45.0% |
| ! | AATGGAAGCATGCATGCATG+CGG | - | chr3_3:90455329-90455348 | Msa0482870:intron | 45.0% |
| GGTGTCAGTGACAAATCATG+GGG | - | chr3_3:90456007-90456026 | Msa0482870:intron | 45.0% | |
| !!! | ATTATTTGATATTTTATTTT+TGG | + | chr3_3:90451606-90451625 | None:intergenic | 5.0% |
| !!! | ATGTTTTTTTATTTTTATTT+TGG | - | chr3_3:90454837-90454856 | Msa0482870:CDS | 5.0% |
| !!! | TATAATAATAATAATTTTGA+GGG | - | chr3_3:90455923-90455942 | Msa0482870:intron | 5.0% |
| GTCAGACACTTACACGACAC+CGG | - | chr3_3:90452718-90452737 | Msa0482870:three_prime_UTR | 50.0% | |
| ! | CAACTTCCTGATTTTCCGGG+TGG | - | chr3_3:90453004-90453023 | Msa0482870:CDS | 50.0% |
| TCAAATGCTTCCACTCCACC+CGG | + | chr3_3:90453022-90453041 | None:intergenic | 50.0% | |
| TTGCATCCTCCATGGTTGGA+AGG | - | chr3_3:90453189-90453208 | Msa0482870:CDS | 50.0% | |
| TGGTATCCTTCCAACCATGG+AGG | + | chr3_3:90453198-90453217 | None:intergenic | 50.0% | |
| AGTCTTGAGCCACCCTACAA+AGG | - | chr3_3:90453306-90453325 | Msa0482870:CDS | 50.0% | |
| CAAGCTAGAGCAGCATCATC+TGG | - | chr3_3:90455405-90455424 | Msa0482870:intron | 50.0% | |
| ! | TCCTGATTTTCCGGGTGGAG+TGG | - | chr3_3:90453009-90453028 | Msa0482870:CDS | 55.0% |
| TCCACTCCACCCGGAAAATC+AGG | + | chr3_3:90453013-90453032 | None:intergenic | 55.0% | |
| ! | AACGATCTCGGAGGGCTAGT+TGG | + | chr3_3:90453925-90453944 | None:intergenic | 55.0% |
| TGAAAGAAGGCGGTCGCGTT+CGG | - | chr3_3:90453954-90453973 | Msa0482870:CDS | 55.0% | |
| !! | GTACTGACTGCCTGAATGCG+TGG | + | chr3_3:90455061-90455080 | None:intergenic | 55.0% |
| GCTAGAGCAGCATCATCTGG+TGG | - | chr3_3:90455408-90455427 | Msa0482870:intron | 55.0% | |
| !! | GATCTCGGAGGGCTAGTTGG+TGG | + | chr3_3:90453922-90453941 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 90451190 | 90456035 | 90451190 | ID=Msa0482870;Name=Msa0482870 |
| chr3_3 | mRNA | 90451190 | 90456035 | 90451190 | ID=Msa0482870-mRNA-1;Parent=Msa0482870;Name=Msa0482870-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.5|0.4|0.8|1|1|5|1772|500 |
| chr3_3 | exon | 90451190 | 90454302 | 90451190 | ID=Msa0482870-mRNA-1:exon:26395;Parent=Msa0482870-mRNA-1 |
| chr3_3 | exon | 90454611 | 90454680 | 90454611 | ID=Msa0482870-mRNA-1:exon:26394;Parent=Msa0482870-mRNA-1 |
| chr3_3 | exon | 90454785 | 90454860 | 90454785 | ID=Msa0482870-mRNA-1:exon:26393;Parent=Msa0482870-mRNA-1 |
| chr3_3 | exon | 90454929 | 90454936 | 90454929 | ID=Msa0482870-mRNA-1:exon:26392;Parent=Msa0482870-mRNA-1 |
| chr3_3 | exon | 90456028 | 90456035 | 90456028 | ID=Msa0482870-mRNA-1:exon:26391;Parent=Msa0482870-mRNA-1 |
| chr3_3 | CDS | 90456028 | 90456035 | 90456028 | ID=Msa0482870-mRNA-1:cds;Parent=Msa0482870-mRNA-1 |
| chr3_3 | CDS | 90454929 | 90454936 | 90454929 | ID=Msa0482870-mRNA-1:cds;Parent=Msa0482870-mRNA-1 |
| chr3_3 | CDS | 90454785 | 90454860 | 90454785 | ID=Msa0482870-mRNA-1:cds;Parent=Msa0482870-mRNA-1 |
| chr3_3 | CDS | 90454611 | 90454680 | 90454611 | ID=Msa0482870-mRNA-1:cds;Parent=Msa0482870-mRNA-1 |
| chr3_3 | CDS | 90452962 | 90454302 | 90452962 | ID=Msa0482870-mRNA-1:cds;Parent=Msa0482870-mRNA-1 |
| chr3_3 | three_prime_UTR | 90451190 | 90452961 | 90451190 | ID=Msa0482870-mRNA-1:three_prime_utr;Parent=Msa0482870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
