Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379790 | XP_003602909.1 | 98.336 | 721 | 7 | 1 | 1 | 721 | 1 | 716 | 0.0 | 1458 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379790 | sp|Q8L7W1|MSL3_ARATH | 55.291 | 671 | 264 | 11 | 38 | 693 | 26 | 675 | 0.0 | 731 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379790 | G7J535 | 98.336 | 721 | 7 | 1 | 1 | 721 | 1 | 716 | 0.0 | 1458 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0038290 | Msa0379790 | 0.810403 | 1.173108e-50 | -8.615850e-47 |
| Msa0054390 | Msa0379790 | -0.805020 | 1.633182e-49 | -8.615850e-47 |
| Msa0081020 | Msa0379790 | -0.828791 | 7.388162e-55 | -8.615850e-47 |
| Msa0132630 | Msa0379790 | 0.850261 | 1.904194e-60 | -8.615850e-47 |
| Msa0231200 | Msa0379790 | -0.840443 | 8.668134e-58 | -8.615850e-47 |
| Msa0379790 | Msa0829300 | -0.806403 | 8.368530e-50 | -8.615850e-47 |
| Msa0379790 | Msa0829330 | -0.809079 | 2.259147e-50 | -8.615850e-47 |
| Msa0379790 | Msa0881360 | -0.839211 | 1.814276e-57 | -8.615850e-47 |
| Msa0379790 | Msa0891590 | -0.808774 | 2.625199e-50 | -8.615850e-47 |
| Msa0379790 | Msa0903310 | -0.812770 | 3.586073e-51 | -8.615850e-47 |
| Msa0379790 | Msa0992510 | -0.802938 | 4.424205e-49 | -8.615850e-47 |
| Msa0379790 | Msa1021590 | -0.826049 | 3.357333e-54 | -8.615850e-47 |
| Msa0379790 | Msa1044680 | -0.850041 | 2.193427e-60 | -8.615850e-47 |
| Msa0379790 | Msa1070720 | -0.819828 | 9.459345e-53 | -8.615850e-47 |
| Msa0379790 | Msa1105640 | -0.846848 | 1.678643e-59 | -8.615850e-47 |
| Msa0379790 | Msa1148960 | -0.863047 | 3.290349e-64 | -8.615850e-47 |
| Msa0379790 | Msa1345610 | 0.977297 | 1.684319e-143 | -8.615850e-47 |
| Msa0379790 | Msa1417440 | 0.987900 | 5.860737e-172 | -8.615850e-47 |
| Msa0269970 | Msa0379790 | -0.861451 | 1.016655e-63 | -8.615850e-47 |
| Msa0323270 | Msa0379790 | -0.837798 | 4.201404e-57 | -8.615850e-47 |
| Msa0349210 | Msa0379790 | -0.808559 | 2.917660e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379790 | MtrunA17_Chr3g0132931 | 98.336 | 721 | 7 | 1 | 1 | 721 | 1 | 716 | 0.0 | 1458 |
| Msa0379790 | MtrunA17_Chr5g0412241 | 54.219 | 723 | 280 | 13 | 12 | 705 | 1 | 701 | 0.0 | 752 |
| Msa0379790 | MtrunA17_Chr3g0132961 | 62.306 | 581 | 204 | 8 | 10 | 585 | 11 | 581 | 0.0 | 718 |
| Msa0379790 | MtrunA17_Chr3g0132941 | 37.799 | 209 | 78 | 9 | 323 | 521 | 133 | 299 | 3.07e-20 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379790 | AT1G58200.2 | 55.291 | 671 | 264 | 11 | 38 | 693 | 26 | 675 | 0.0 | 731 |
| Msa0379790 | AT1G58200.1 | 55.291 | 671 | 264 | 11 | 38 | 693 | 26 | 675 | 0.0 | 731 |
| Msa0379790 | AT5G10490.1 | 54.852 | 711 | 272 | 13 | 12 | 717 | 1 | 667 | 0.0 | 719 |
| Msa0379790 | AT5G10490.2 | 56.278 | 677 | 250 | 12 | 46 | 717 | 4 | 639 | 0.0 | 715 |
| Msa0379790 | AT5G10490.3 | 56.076 | 683 | 254 | 12 | 40 | 717 | 24 | 665 | 0.0 | 715 |
| Msa0379790 | AT4G00290.1 | 26.291 | 213 | 141 | 6 | 261 | 465 | 286 | 490 | 4.61e-12 | 69.7 |
Find 204 sgRNAs with CRISPR-Local
Find 527 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATTGCCTTTGCTGTTTA+TGG | 0.117984 | 3_1:+81179261 | Msa0379790:CDS |
| GTAATTAAAATTAAAATATT+TGG | 0.148257 | 3_1:-81176609 | None:intergenic |
| TCTGGAAGATATGATGATTT+TGG | 0.151263 | 3_1:-81176819 | None:intergenic |
| TGCAAAATTCTCATCACTTT+TGG | 0.160964 | 3_1:-81183587 | None:intergenic |
| ATTGAGGGGTATGAGGTTTC+TGG | 0.210367 | 3_1:+81181181 | Msa0379790:CDS |
| TTTGGTTGGAACTTCGAAAA+AGG | 0.224946 | 3_1:-81176591 | None:intergenic |
| TCTTCACCATTAACTTTATA+CGG | 0.230735 | 3_1:-81183484 | None:intergenic |
| GTCTGAGATGGCAGGATTAT+TGG | 0.231716 | 3_1:-81179622 | None:intergenic |
| TCCTTGGAGTTTACACTAGA+TGG | 0.266948 | 3_1:-81183625 | None:intergenic |
| AAGAAGAATATTCTCTTCTA+AGG | 0.269634 | 3_1:-81183932 | None:intergenic |
| GAATTGTATTTCAATACTTC+TGG | 0.271444 | 3_1:-81176837 | None:intergenic |
| ATCCACTCATTCAATATAAA+TGG | 0.277217 | 3_1:-81181148 | None:intergenic |
| CATCTCCTTTAGAGATGATT+TGG | 0.278927 | 3_1:+81184411 | Msa0379790:three_prime_UTR |
| GGAATCAATCGAAGCAAAAT+AGG | 0.284248 | 3_1:-81179228 | None:intergenic |
| GAACCACCGTATAAAGTTAA+TGG | 0.285284 | 3_1:+81183478 | Msa0379790:CDS |
| TTATGTGGCGCCTGGAAATA+TGG | 0.295307 | 3_1:-81176532 | None:intergenic |
| AAGATTGTAATCTGTAATAT+TGG | 0.297871 | 3_1:+81184388 | Msa0379790:three_prime_UTR |
| TTATTGCCTTTGCTGTTTAT+GGG | 0.298393 | 3_1:+81179262 | Msa0379790:CDS |
| TAGGTCATATGATTCTTTAT+TGG | 0.307183 | 3_1:+81179200 | Msa0379790:intron |
| CTAGATGGCGCATGCCTTGT+TGG | 0.308296 | 3_1:-81177570 | None:intergenic |
| AGCTGATATGCGCAAGGTTT+TGG | 0.309117 | 3_1:+81181682 | Msa0379790:CDS |
| TGCTGCTGTGTCATTATTCA+TGG | 0.310689 | 3_1:+81180776 | Msa0379790:CDS |
| TGGTTAACTGCTGGTGGTTT+GGG | 0.312167 | 3_1:+81180825 | Msa0379790:CDS |
| TTAGAAGAGAATATTCTTCT+TGG | 0.319652 | 3_1:+81183934 | Msa0379790:CDS |
| AACTATCAGAACCCATGTTC+TGG | 0.320526 | 3_1:-81183678 | None:intergenic |
| CTTCTTGGGGTTGCACTTGA+AGG | 0.322534 | 3_1:+81183949 | Msa0379790:CDS |
| TGCTCTGGATCGAGTGAAAA+TGG | 0.324671 | 3_1:-81183428 | None:intergenic |
| GAAACAGGAGGCAATCCTTT+TGG | 0.327663 | 3_1:+81183297 | Msa0379790:intron |
| TCCGGATGGGAGTGGCTAAC+CGG | 0.331872 | 3_1:-81183351 | None:intergenic |
| TAGATGGCGCATGCCTTGTT+GGG | 0.335717 | 3_1:-81177569 | None:intergenic |
| CAATGCCACGGTTTCTTAAC+GGG | 0.336345 | 3_1:-81177029 | None:intergenic |
| TAGAAGAGAATATTCTTCTT+GGG | 0.339763 | 3_1:+81183935 | Msa0379790:CDS |
| AGCAATATACACTGCTGTTT+GGG | 0.342027 | 3_1:+81180752 | Msa0379790:CDS |
| AAGCAATATACACTGCTGTT+TGG | 0.345518 | 3_1:+81180751 | Msa0379790:CDS |
| AGGTCATATGATTCTTTATT+GGG | 0.349745 | 3_1:+81179201 | Msa0379790:intron |
| AGGCTCAAAACTAGTAATAA+TGG | 0.353567 | 3_1:+81177153 | Msa0379790:CDS |
| CGGGCGATTCACTGCTGCTC+TGG | 0.357040 | 3_1:-81183443 | None:intergenic |
| CAGCCATTATTATTGTGGAC+TGG | 0.362516 | 3_1:+81179497 | Msa0379790:CDS |
| GGATTCATTTCTTCCTCAAT+TGG | 0.382478 | 3_1:-81183988 | None:intergenic |
| CCTCGGAAAATATACCCTTT+GGG | 0.382562 | 3_1:+81183401 | Msa0379790:CDS |
| ACGATCATCACCTCTAATAA+TGG | 0.384373 | 3_1:-81181421 | None:intergenic |
| GCCTCGGAAAATATACCCTT+TGG | 0.385437 | 3_1:+81183400 | Msa0379790:CDS |
| GCCCCAGTCCACAATAATAA+TGG | 0.387380 | 3_1:-81179500 | None:intergenic |
| CTACCGGGTGGTGGAGGGAG+TGG | 0.388142 | 3_1:+81177624 | Msa0379790:CDS |
| GCCATCCTACCGGGTGGTGG+AGG | 0.388405 | 3_1:+81177618 | Msa0379790:CDS |
| TCTTGTGACTCAGCCGAGTT+AGG | 0.388980 | 3_1:-81184015 | None:intergenic |
| ACAGTATTGCTCACTCTTGC+CGG | 0.390378 | 3_1:+81180849 | Msa0379790:CDS |
| GACTCATGGTTAGTAATAAC+AGG | 0.390821 | 3_1:-81183820 | None:intergenic |
| GTGGTTAACTGCTGGTGGTT+TGG | 0.396659 | 3_1:+81180824 | Msa0379790:CDS |
| TGAGGAGTACCTTTGTGTTA+AGG | 0.398606 | 3_1:+81182509 | Msa0379790:CDS |
| GAAGTATTGAAATACAATTC+AGG | 0.401253 | 3_1:+81176840 | Msa0379790:five_prime_UTR |
| ACATACATTTCTTGCATCAC+TGG | 0.405151 | 3_1:-81180348 | None:intergenic |
| TTTATGGGAGCCATATTTCC+AGG | 0.405318 | 3_1:+81176522 | None:intergenic |
| TTGACAGTGAACTTGTGATT+AGG | 0.406344 | 3_1:-81181459 | None:intergenic |
| TCAATGCCACGGTTTCTTAA+CGG | 0.408145 | 3_1:-81177030 | None:intergenic |
| AGCCATTATTATTGTGGACT+GGG | 0.408214 | 3_1:+81179498 | Msa0379790:CDS |
| TCCTTCTTATCTTTGTTAGC+AGG | 0.413944 | 3_1:-81184069 | None:intergenic |
| AAGGCAAAGAAGGTATGATT+TGG | 0.415225 | 3_1:-81176730 | None:intergenic |
| CTTTGACTTGGACTTATCCT+TGG | 0.417001 | 3_1:-81183641 | None:intergenic |
| CATTTGCTTACTGTTTATCA+AGG | 0.428109 | 3_1:+81179704 | Msa0379790:CDS |
| ATATAAATGGCCGAGTTGTA+TGG | 0.432347 | 3_1:-81181135 | None:intergenic |
| CCACGAGTTGAACGAGTTGA+CGG | 0.433490 | 3_1:-81183517 | None:intergenic |
| CAACAAGGCATGCGCCATCT+AGG | 0.438226 | 3_1:+81177571 | Msa0379790:CDS |
| AACAAAGATTGAGGGGTATG+AGG | 0.439911 | 3_1:+81181174 | Msa0379790:CDS |
| AGTTGAAAAGGTGAAGTGAT+TGG | 0.443938 | 3_1:+81177052 | Msa0379790:five_prime_UTR |
| GTTAGATTTATTCATTTATG+TGG | 0.444235 | 3_1:-81176547 | None:intergenic |
| GCTAAGCAAAATGACTAGAT+TGG | 0.445276 | 3_1:+81184117 | Msa0379790:exon |
| AGCCACTACTTCGTCTCAGC+AGG | 0.445866 | 3_1:+81179289 | Msa0379790:CDS |
| ACTATCAGAACCCATGTTCT+GGG | 0.446447 | 3_1:-81183677 | None:intergenic |
| ATGTCGCTCTGCCATCCTAC+CGG | 0.447780 | 3_1:+81177608 | Msa0379790:CDS |
| TCCTGAAAACACAGCTCTAA+AGG | 0.450592 | 3_1:+81181766 | Msa0379790:CDS |
| TTTACCCTTGGAGGAAGAAA+AGG | 0.453949 | 3_1:-81176749 | None:intergenic |
| AGATTCTCGGAGTAGGAAAC+AGG | 0.455437 | 3_1:-81184321 | None:intergenic |
| TTACTAACCATGAGTCTAGC+AGG | 0.459792 | 3_1:+81183827 | Msa0379790:CDS |
| TCATTATTCATGGAGTTGCT+AGG | 0.467872 | 3_1:+81180786 | Msa0379790:CDS |
| CTTCGATTGATTCCAGCCCT+TGG | 0.468132 | 3_1:+81179237 | Msa0379790:CDS |
| CGAGAAAATTGCATAGAACC+TGG | 0.470723 | 3_1:-81177123 | None:intergenic |
| GCATTTGGAAATGAAGAGGT+TGG | 0.471934 | 3_1:-81184096 | None:intergenic |
| CAACACTTATGTCAGATTCT+CGG | 0.473569 | 3_1:-81184334 | None:intergenic |
| TTCTGAAGAACTTCAACCTA+AGG | 0.473666 | 3_1:-81184180 | None:intergenic |
| AATTAACCCCTCCCTTGACT+TGG | 0.475269 | 3_1:+81176678 | Msa0379790:five_prime_UTR |
| TTGCTTTCCCAGCAAAATCA+AGG | 0.476830 | 3_1:-81180734 | None:intergenic |
| TGGTCACCAACCATTATTAG+AGG | 0.477341 | 3_1:+81181411 | Msa0379790:CDS |
| TTATTCATTTATGTGGCGCC+TGG | 0.479449 | 3_1:-81176540 | None:intergenic |
| CCCGGTTAGCCACTCCCATC+CGG | 0.482156 | 3_1:+81183350 | Msa0379790:CDS |
| GGCTTGGAAGAAATTAATAG+AGG | 0.485421 | 3_1:-81176798 | None:intergenic |
| GAGTTTGCTGTCCAACGGAA+TGG | 0.486188 | 3_1:+81184036 | Msa0379790:CDS |
| TCCTGCTAACAAAGATAAGA+AGG | 0.488760 | 3_1:+81184068 | Msa0379790:CDS |
| TTAAAATTAAAATATTTGGT+TGG | 0.490531 | 3_1:-81176605 | None:intergenic |
| TACATGATGCTGAAAACTAC+GGG | 0.491533 | 3_1:-81177178 | None:intergenic |
| ATCTGACTCAGAAATCTCAT+TGG | 0.494433 | 3_1:+81181493 | Msa0379790:CDS |
| TAACATTACGAATTTACCCT+TGG | 0.494931 | 3_1:-81176761 | None:intergenic |
| TATGGATCATTATACTTGAA+AGG | 0.495848 | 3_1:-81181117 | None:intergenic |
| AATTTCTGTTGCTCCACTTG+AGG | 0.495916 | 3_1:-81181713 | None:intergenic |
| CCTTGACTTGGATGAGGAGG+AGG | 0.496729 | 3_1:+81176690 | Msa0379790:five_prime_UTR |
| CCCTCCACCACCCGGTAGGA+TGG | 0.496972 | 3_1:-81177619 | None:intergenic |
| CATTACGAATTTACCCTTGG+AGG | 0.497056 | 3_1:-81176758 | None:intergenic |
| GAATCAATCGAAGCAAAATA+GGG | 0.497586 | 3_1:-81179227 | None:intergenic |
| ACCGTGGCATTGAGTTGAAA+AGG | 0.499151 | 3_1:+81177040 | Msa0379790:five_prime_UTR |
| CCGGATGGGAGTGGCTAACC+GGG | 0.500022 | 3_1:-81183350 | None:intergenic |
| TTCTTATCTTTGTTAGCAGG+AGG | 0.502177 | 3_1:-81184066 | None:intergenic |
| GTGGTTCTATTAGTAAGAAC+GGG | 0.504498 | 3_1:-81183462 | None:intergenic |
| AGTTTGCTGTCCAACGGAAT+GGG | 0.505163 | 3_1:+81184037 | Msa0379790:CDS |
| CCATCCTACCGGGTGGTGGA+GGG | 0.505615 | 3_1:+81177619 | Msa0379790:CDS |
| TCTGCCATCCTACCGGGTGG+TGG | 0.506157 | 3_1:+81177615 | Msa0379790:CDS |
| CCTGCCATCTCAGACTAGTC+AGG | 0.507836 | 3_1:+81179630 | Msa0379790:CDS |
| CAAGTCTTCAATTTCAACAA+TGG | 0.509177 | 3_1:+81177095 | Msa0379790:CDS |
| TACCGGGTGGTGGAGGGAGT+GGG | 0.509448 | 3_1:+81177625 | Msa0379790:CDS |
| TTGCTCCAAATCATCTCTAA+AGG | 0.510724 | 3_1:-81184416 | None:intergenic |
| TGAGGTTTCTGGCACAGTTG+AGG | 0.511851 | 3_1:+81181192 | Msa0379790:CDS |
| CAACTCTGAGAAGATCCAAA+AGG | 0.513442 | 3_1:-81183312 | None:intergenic |
| AAAAGAAACTGCAGGAGATG+TGG | 0.513721 | 3_1:+81183735 | Msa0379790:CDS |
| GCTGTCCAACGGAATGGGAA+TGG | 0.514341 | 3_1:+81184042 | Msa0379790:CDS |
| GGCCATTTATATTGAATGAG+TGG | 0.514735 | 3_1:+81181146 | Msa0379790:CDS |
| CTGAACTGTCCGGATGGGAG+TGG | 0.519563 | 3_1:-81183359 | None:intergenic |
| TTGAGCATCAGACTTTGACT+TGG | 0.526242 | 3_1:-81183653 | None:intergenic |
| TTACATTTCTATCAGTCACT+TGG | 0.527731 | 3_1:+81181527 | Msa0379790:CDS |
| TTCAGAGGACTGACAGCAGT+TGG | 0.529245 | 3_1:+81179435 | Msa0379790:intron |
| GCAAGATGAAGAGAAATCTT+CGG | 0.529586 | 3_1:+81183885 | Msa0379790:CDS |
| TCCTCATCCAAGTCAAGGGA+GGG | 0.531184 | 3_1:-81176685 | None:intergenic |
| CTGGGGCAATGCTCATATGC+AGG | 0.532365 | 3_1:+81179516 | Msa0379790:CDS |
| TTTAAATTATAATGAAGAGA+AGG | 0.532523 | 3_1:+81184358 | Msa0379790:three_prime_UTR |
| TGGATTCAAACAAAGATTGA+GGG | 0.532585 | 3_1:+81181166 | Msa0379790:CDS |
| TCAGAAACTACACTATGTGC+AGG | 0.532696 | 3_1:-81183790 | None:intergenic |
| GTGGATTCAAACAAAGATTG+AGG | 0.532984 | 3_1:+81181165 | Msa0379790:CDS |
| TGATGCTCAAACCCAGAACA+TGG | 0.533483 | 3_1:+81183666 | Msa0379790:CDS |
| CTCGGAAAATATACCCTTTG+GGG | 0.533597 | 3_1:+81183402 | Msa0379790:CDS |
| CCCCTCCCTTGACTTGGATG+AGG | 0.534496 | 3_1:+81176684 | Msa0379790:five_prime_UTR |
| TGTCGCTCTGCCATCCTACC+GGG | 0.537547 | 3_1:+81177609 | Msa0379790:CDS |
| CATTTGACAGAATCCGGCGC+GGG | 0.537802 | 3_1:+81177292 | Msa0379790:intron |
| GAGGTCCATTCCCATTCCGT+TGG | 0.538198 | 3_1:-81184047 | None:intergenic |
| GGAGGAAGAAAAGGCAAAGA+AGG | 0.538831 | 3_1:-81176740 | None:intergenic |
| AGCAACAGAAATTGCACAGA+AGG | 0.539152 | 3_1:+81181723 | Msa0379790:CDS |
| CGTGTACTCCACGTAAAAGA+TGG | 0.539288 | 3_1:-81177545 | None:intergenic |
| CTTAGCATTTGGAAATGAAG+AGG | 0.540708 | 3_1:-81184100 | None:intergenic |
| CTCCCTTGACTTGGATGAGG+AGG | 0.544294 | 3_1:+81176687 | Msa0379790:five_prime_UTR |
| GACTCAGCCGAGTTAGGAGA+TGG | 0.546014 | 3_1:-81184009 | None:intergenic |
| CCTCCTCCTCATCCAAGTCA+AGG | 0.547498 | 3_1:-81176690 | None:intergenic |
| GTCCCACTCCCTCCACCACC+CGG | 0.553788 | 3_1:-81177627 | None:intergenic |
| TGACAGAATCCGGCGCGGGT+TGG | 0.555558 | 3_1:+81177296 | Msa0379790:intron |
| ACTGCAGGAGATGTGGGAAA+AGG | 0.555701 | 3_1:+81183742 | Msa0379790:CDS |
| TTGTCAGTCATCATCGAGCC+CGG | 0.555870 | 3_1:+81183332 | Msa0379790:CDS |
| AGAAGAGAATATTCTTCTTG+GGG | 0.555945 | 3_1:+81183936 | Msa0379790:CDS |
| TGTCTGCCCTGCTAGACTCA+TGG | 0.556999 | 3_1:-81183834 | None:intergenic |
| AAGGCAATAATACCAAGGGC+TGG | 0.559924 | 3_1:-81179249 | None:intergenic |
| AAAGAAACTGCAGGAGATGT+GGG | 0.560476 | 3_1:+81183736 | Msa0379790:CDS |
| GTGAAAATGGAATCCCCAAA+GGG | 0.563083 | 3_1:-81183415 | None:intergenic |
| CTCCTCATCCAAGTCAAGGG+AGG | 0.563830 | 3_1:-81176686 | None:intergenic |
| TGTAATCGTCCAACCCGCGC+CGG | 0.565322 | 3_1:-81177305 | None:intergenic |
| AGAATATTCTCTTCTAAGGG+AGG | 0.566683 | 3_1:-81183928 | None:intergenic |
| TGCCACAGGTTCATCAACCT+TGG | 0.570082 | 3_1:-81183557 | None:intergenic |
| ATACATGATGCTGAAAACTA+CGG | 0.570217 | 3_1:-81177179 | None:intergenic |
| AGAAGAATATTCTCTTCTAA+GGG | 0.571417 | 3_1:-81183931 | None:intergenic |
| GGAGGTTTAACTGCTGATGA+TGG | 0.571460 | 3_1:-81183910 | None:intergenic |
| CACAAGAGTTTGCTGTCCAA+CGG | 0.571868 | 3_1:+81184031 | Msa0379790:CDS |
| CAGAAACTACACTATGTGCA+GGG | 0.572356 | 3_1:-81183789 | None:intergenic |
| AATATACAGTGAGCCTGCCT+CGG | 0.575648 | 3_1:+81183384 | Msa0379790:CDS |
| ACACAGAAGTGGTTAACTGC+TGG | 0.580779 | 3_1:+81180816 | Msa0379790:CDS |
| GCTAACAAAGATAAGAAGGA+TGG | 0.580826 | 3_1:+81184072 | Msa0379790:CDS |
| GGTGGTTCTATTAGTAAGAA+CGG | 0.584350 | 3_1:-81183463 | None:intergenic |
| ATTTCAACAATGGCGTACCC+AGG | 0.586378 | 3_1:+81177105 | Msa0379790:CDS |
| TTATGTCAGATTCTCGGAGT+AGG | 0.588541 | 3_1:-81184328 | None:intergenic |
| CTCCTCCTCATCCAAGTCAA+GGG | 0.588745 | 3_1:-81176689 | None:intergenic |
| ACAGTGGTGTACCTCTCGAC+CGG | 0.589587 | 3_1:-81180868 | None:intergenic |
| AGATGGCGCATGCCTTGTTG+GGG | 0.590773 | 3_1:-81177568 | None:intergenic |
| TCCATCTAGTGTAAACTCCA+AGG | 0.591305 | 3_1:+81183624 | Msa0379790:CDS |
| AGTGCGCGGTAAAAGATTCG+TGG | 0.592576 | 3_1:-81177336 | None:intergenic |
| CCGTCAACTCGTTCAACTCG+TGG | 0.592850 | 3_1:+81183517 | Msa0379790:CDS |
| CCTGACTAGTCTGAGATGGC+AGG | 0.593866 | 3_1:-81179630 | None:intergenic |
| GCCATTATTATTGTGGACTG+GGG | 0.594152 | 3_1:+81179499 | Msa0379790:CDS |
| TCATCACCTCTAATAATGGT+TGG | 0.596112 | 3_1:-81181417 | None:intergenic |
| CCTCATCCAAGTCAAGGGAG+GGG | 0.598433 | 3_1:-81176684 | None:intergenic |
| CTCAATCCCATAAACAGCAA+AGG | 0.602491 | 3_1:-81179268 | None:intergenic |
| GCTCACTCTTGCCGGTCGAG+AGG | 0.602784 | 3_1:+81180857 | Msa0379790:CDS |
| AATGAATCCATCTCCTAACT+CGG | 0.604421 | 3_1:+81184002 | Msa0379790:CDS |
| CACTCCCTCCACCACCCGGT+AGG | 0.604652 | 3_1:-81177623 | None:intergenic |
| TAGGTTTCTCCACACAGAAG+TGG | 0.609034 | 3_1:+81180805 | Msa0379790:CDS |
| TATTGTAGCTGATATGCGCA+AGG | 0.609834 | 3_1:+81181676 | Msa0379790:CDS |
| CAGAAGTGGTTAACTGCTGG+TGG | 0.614907 | 3_1:+81180819 | Msa0379790:CDS |
| ACGACCTGACTAGTCTGAGA+TGG | 0.620289 | 3_1:-81179634 | None:intergenic |
| CGCTCTGCCATCCTACCGGG+TGG | 0.624226 | 3_1:+81177612 | Msa0379790:CDS |
| ATCCTGCTGAGACGAAGTAG+TGG | 0.624352 | 3_1:-81179291 | None:intergenic |
| AGCAAAGGCAATAATACCAA+GGG | 0.628101 | 3_1:-81179253 | None:intergenic |
| TCGTTCAACTCGTGGCAATG+AGG | 0.629437 | 3_1:+81183525 | Msa0379790:CDS |
| CATGGGTTCTGATAGTTCAG+TGG | 0.631810 | 3_1:+81183684 | Msa0379790:CDS |
| TACTAACCATGAGTCTAGCA+GGG | 0.636326 | 3_1:+81183828 | Msa0379790:CDS |
| GCAACAGAAATTGCACAGAA+GGG | 0.640894 | 3_1:+81181724 | Msa0379790:CDS |
| CAGCAAAGGCAATAATACCA+AGG | 0.642606 | 3_1:-81179254 | None:intergenic |
| AGTGAAAATGGAATCCCCAA+AGG | 0.643663 | 3_1:-81183416 | None:intergenic |
| GTGGAGTACACGCCCCAACA+AGG | 0.646133 | 3_1:+81177556 | Msa0379790:CDS |
| GAGAAAATTGCATAGAACCT+GGG | 0.649314 | 3_1:-81177122 | None:intergenic |
| AATGCCACGGTTTCTTAACG+GGG | 0.654023 | 3_1:-81177028 | None:intergenic |
| GATGCTCAAACCCAGAACAT+GGG | 0.655040 | 3_1:+81183667 | Msa0379790:CDS |
| TATTAGAGGTGATGATCGTG+AGG | 0.660808 | 3_1:+81181425 | Msa0379790:CDS |
| TCACCATTAACTTTATACGG+TGG | 0.661817 | 3_1:-81183481 | None:intergenic |
| AGAAACTACACTATGTGCAG+GGG | 0.663314 | 3_1:-81183788 | None:intergenic |
| AGTACTTTACCTTAACACAA+AGG | 0.665075 | 3_1:-81182518 | None:intergenic |
| GGATTCAAACAAAGATTGAG+GGG | 0.668904 | 3_1:+81181167 | Msa0379790:CDS |
| GTAACCCCGTTAAGAAACCG+TGG | 0.671052 | 3_1:+81177024 | Msa0379790:five_prime_UTR |
| GTATAATGATCCATACAACT+CGG | 0.679127 | 3_1:+81181125 | Msa0379790:CDS |
| AGCAGTTAACCACTTCTGTG+TGG | 0.686421 | 3_1:-81180814 | None:intergenic |
| TGCCAAGGTTGATGAACCTG+TGG | 0.690105 | 3_1:+81183555 | Msa0379790:CDS |
| TCATTTGACAGAATCCGGCG+CGG | 0.715427 | 3_1:+81177291 | Msa0379790:intron |
| ACATGATGCTGAAAACTACG+GGG | 0.789598 | 3_1:-81177177 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTATATTTTATAAA+TGG | + | chr3_1:81179765-81179784 | Msa0379790:intron | 0.0% |
| !! | TTAAAATTAAAATATTTGGT+TGG | - | chr3_1:81176608-81176627 | None:intergenic | 10.0% |
| !!! | TTATTTTTAGATATTTATGT+AGG | + | chr3_1:81179181-81179200 | Msa0379790:intron | 10.0% |
| !! | AAGAAATAAAGAAATAAAAA+AGG | - | chr3_1:81179349-81179368 | None:intergenic | 10.0% |
| !! | GAAATGAAAAAAAATAAAAA+AGG | - | chr3_1:81179377-81179396 | None:intergenic | 10.0% |
| !!! | GTTTAAATTTTAATGTTATA+TGG | + | chr3_1:81180263-81180282 | Msa0379790:intron | 10.0% |
| !!! | AAATAAGTTTAATGTTTTAA+TGG | + | chr3_1:81182050-81182069 | Msa0379790:intron | 10.0% |
| !!! | AATAAGTTTAATGTTTTAAT+GGG | + | chr3_1:81182051-81182070 | Msa0379790:intron | 10.0% |
| !!! | ATTATTAGAAAAAAAAGTTT+TGG | + | chr3_1:81182111-81182130 | Msa0379790:intron | 10.0% |
| !! | CATATAGAAAATATTATCAA+TGG | - | chr3_1:81177896-81177915 | None:intergenic | 15.0% |
| !! | AAATATTTATTATAGTGTTG+TGG | + | chr3_1:81178356-81178375 | Msa0379790:intron | 15.0% |
| !!! | TATTTCAATGATATTTTCTT+TGG | + | chr3_1:81178760-81178779 | Msa0379790:intron | 15.0% |
| !! | ATAAAGAAATAAAAAAGGTT+GGG | - | chr3_1:81179344-81179363 | None:intergenic | 15.0% |
| !! | AATAAAGAAATAAAAAAGGT+TGG | - | chr3_1:81179345-81179364 | None:intergenic | 15.0% |
| !!! | TAAATGAAATCTTACTTTTA+GGG | - | chr3_1:81179983-81180002 | None:intergenic | 15.0% |
| !!! | ATAAATGAAATCTTACTTTT+AGG | - | chr3_1:81179984-81180003 | None:intergenic | 15.0% |
| !!! | TTTTAGTATTAAATGTGTAT+TGG | + | chr3_1:81180229-81180248 | Msa0379790:intron | 15.0% |
| !! | TTTAGTATTAAATGTGTATT+GGG | + | chr3_1:81180230-81180249 | Msa0379790:intron | 15.0% |
| !! | ATTAAAATTTAAACGTAATC+AGG | - | chr3_1:81180257-81180276 | None:intergenic | 15.0% |
| !!! | ACTTTTTCTTACAAAATTTA+TGG | - | chr3_1:81180966-81180985 | None:intergenic | 15.0% |
| !! | AAAGTTCATTTAATTGATAA+TGG | - | chr3_1:81181011-81181030 | None:intergenic | 15.0% |
| !! | ATATGTAAAAGTTCATTTAA+AGG | - | chr3_1:81181228-81181247 | None:intergenic | 15.0% |
| !!! | TAAATGAACTTTTACATATA+AGG | + | chr3_1:81181229-81181248 | Msa0379790:intron | 15.0% |
| !!! | TGTTTTTTTACATTTGTAAA+AGG | - | chr3_1:81183051-81183070 | None:intergenic | 15.0% |
| !! | TTTAAATTATAATGAAGAGA+AGG | + | chr3_1:81184358-81184377 | Msa0379790:three_prime_UTR | 15.0% |
| !! | GTTAGATTTATTCATTTATG+TGG | - | chr3_1:81176550-81176569 | None:intergenic | 20.0% |
| !! | ATGTAATATTATGAGAAAGA+CGG | - | chr3_1:81177854-81177873 | None:intergenic | 20.0% |
| !! | ATAAAAGTCAAAGAAACATA+TGG | - | chr3_1:81178189-81178208 | None:intergenic | 20.0% |
| !!! | AGACATACAAAAACTTTTAA+TGG | - | chr3_1:81178276-81178295 | None:intergenic | 20.0% |
| !! | AATAAATAGATACCAAAAGT+TGG | - | chr3_1:81178896-81178915 | None:intergenic | 20.0% |
| !!! | AACTTTTGGTATCTATTTAT+TGG | + | chr3_1:81178895-81178914 | Msa0379790:intron | 20.0% |
| !! | TAGATTATGCATTGAATAAT+AGG | - | chr3_1:81179153-81179172 | None:intergenic | 20.0% |
| !! | TAATTAATCTAGACAAGTAA+TGG | + | chr3_1:81179948-81179967 | Msa0379790:intron | 20.0% |
| !! | AATTAATCTAGACAAGTAAT+GGG | + | chr3_1:81179949-81179968 | Msa0379790:intron | 20.0% |
| !! | ATAAATAGGTTAACGATATT+GGG | - | chr3_1:81180678-81180697 | None:intergenic | 20.0% |
| !! | ATCAATTAAATGAACTTTGT+TGG | + | chr3_1:81181013-81181032 | Msa0379790:intron | 20.0% |
| !!! | TCATATTTTAATGTGAAAAC+TGG | + | chr3_1:81181621-81181640 | Msa0379790:intron | 20.0% |
| !!! | TTTTATTACTATGTTAACTG+TGG | - | chr3_1:81181989-81182008 | None:intergenic | 20.0% |
| !!! | ATTAGAAAAAAAAGTTTTGG+TGG | + | chr3_1:81182114-81182133 | Msa0379790:intron | 20.0% |
| !!! | ACTGATAATTAATAATTTGC+CGG | - | chr3_1:81182644-81182663 | None:intergenic | 20.0% |
| !!! | ATGCTTATTTTGTGAATATT+CGG | + | chr3_1:81182768-81182787 | Msa0379790:intron | 20.0% |
| !! | CAAATAAGAATCACTATAAT+AGG | + | chr3_1:81182886-81182905 | Msa0379790:intron | 20.0% |
| !! | ACTACTGTATTATTATATGT+AGG | - | chr3_1:81182967-81182986 | None:intergenic | 20.0% |
| !!! | TTTTTCCTACTAAATATAAG+TGG | + | chr3_1:81183248-81183267 | Msa0379790:intron | 20.0% |
| !! | AAATATAAGTGGTCTAATTA+AGG | + | chr3_1:81183259-81183278 | Msa0379790:intron | 20.0% |
| !! | AAGATTGTAATCTGTAATAT+TGG | + | chr3_1:81184388-81184407 | Msa0379790:three_prime_UTR | 20.0% |
| ! | GAATTGTATTTCAATACTTC+TGG | - | chr3_1:81176840-81176859 | None:intergenic | 25.0% |
| !!! | GAAGTATTGAAATACAATTC+AGG | + | chr3_1:81176840-81176859 | Msa0379790:five_prime_UTR | 25.0% |
| ! | TAACAGAAAAATGAGATCTA+AGG | - | chr3_1:81176868-81176887 | None:intergenic | 25.0% |
| !! | AAACAAAACCCTAAAAGTTT+TGG | - | chr3_1:81176961-81176980 | None:intergenic | 25.0% |
| ! | GCAAGAGAAAGAAAAAAAAA+AGG | - | chr3_1:81176990-81177009 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTCTTTCTCTTGC+AGG | + | chr3_1:81176990-81177009 | Msa0379790:intron | 25.0% |
| ! | AAGTATACAGAACAAAAAAG+TGG | - | chr3_1:81177231-81177250 | None:intergenic | 25.0% |
| !! | ATGCATTTTTGATGCTAATT+AGG | + | chr3_1:81177391-81177410 | Msa0379790:intron | 25.0% |
| !! | CTCATTGAAAAACACTATTT+TGG | + | chr3_1:81177493-81177512 | Msa0379790:intron | 25.0% |
| ! | TAAACATACACACTAAATTG+TGG | - | chr3_1:81177728-81177747 | None:intergenic | 25.0% |
| ! | TATATCAAAGAAAATCTCAC+TGG | - | chr3_1:81178005-81178024 | None:intergenic | 25.0% |
| ! | GATATATTTCTCAATTCAGT+TGG | + | chr3_1:81178019-81178038 | Msa0379790:intron | 25.0% |
| ! | ATTTATGCCAAAAATCAGAT+GGG | - | chr3_1:81178120-81178139 | None:intergenic | 25.0% |
| ! | AATTTATGCCAAAAATCAGA+TGG | - | chr3_1:81178121-81178140 | None:intergenic | 25.0% |
| !! | AAAACTTTTAATGGCATAAG+CGG | - | chr3_1:81178267-81178286 | None:intergenic | 25.0% |
| ! | TGAGTAAATTTAAATCGAGA+AGG | - | chr3_1:81178794-81178813 | None:intergenic | 25.0% |
| ! | CATTGAATAATAGGTTACAA+AGG | - | chr3_1:81179144-81179163 | None:intergenic | 25.0% |
| ! | TAGGTCATATGATTCTTTAT+TGG | + | chr3_1:81179200-81179219 | Msa0379790:intron | 25.0% |
| ! | AGGTCATATGATTCTTTATT+GGG | + | chr3_1:81179201-81179220 | Msa0379790:intron | 25.0% |
| !! | AAAGTATCACAAATCAGAAA+AGG | - | chr3_1:81179415-81179434 | None:intergenic | 25.0% |
| !! | ATTTTCAGCCATTATTATTG+TGG | + | chr3_1:81179492-81179511 | Msa0379790:CDS | 25.0% |
| !!! | ATCTTACTTTTAGGGTAAAA+AGG | - | chr3_1:81179975-81179994 | None:intergenic | 25.0% |
| !! | TTTCATTTATTGCTTGCTTT+TGG | + | chr3_1:81179994-81180013 | Msa0379790:intron | 25.0% |
| ! | TAGGATTATACTAGACATTT+AGG | + | chr3_1:81180551-81180570 | Msa0379790:intron | 25.0% |
| ! | TCTGTTTGAATCTTTCTATT+AGG | + | chr3_1:81180649-81180668 | Msa0379790:intron | 25.0% |
| ! | CTGTTTGAATCTTTCTATTA+GGG | + | chr3_1:81180650-81180669 | Msa0379790:intron | 25.0% |
| ! | TAAATAGGTTAACGATATTG+GGG | - | chr3_1:81180677-81180696 | None:intergenic | 25.0% |
| ! | CATAAATAGGTTAACGATAT+TGG | - | chr3_1:81180679-81180698 | None:intergenic | 25.0% |
| ! | CAATATCGTTAACCTATTTA+TGG | + | chr3_1:81180677-81180696 | Msa0379790:intron | 25.0% |
| ! | TTAAATGAGATGCCATAAAT+AGG | - | chr3_1:81180692-81180711 | None:intergenic | 25.0% |
| ! | AAGAAAAAATGATTGACAGA+TGG | + | chr3_1:81180710-81180729 | Msa0379790:intron | 25.0% |
| ! | AGAAAAAATGATTGACAGAT+GGG | + | chr3_1:81180711-81180730 | Msa0379790:intron | 25.0% |
| ! | TTTGTAAGAAAAAGTCTTCT+AGG | + | chr3_1:81180971-81180990 | Msa0379790:intron | 25.0% |
| !!! | ATTTAATTGATAATGGCTAC+TGG | - | chr3_1:81181004-81181023 | None:intergenic | 25.0% |
| ! | TATGGATCATTATACTTGAA+AGG | - | chr3_1:81181120-81181139 | None:intergenic | 25.0% |
| ! | ATCCACTCATTCAATATAAA+TGG | - | chr3_1:81181151-81181170 | None:intergenic | 25.0% |
| ! | TCTATATGTCAAATGATTGT+GGG | - | chr3_1:81181303-81181322 | None:intergenic | 25.0% |
| ! | TTCTATATGTCAAATGATTG+TGG | - | chr3_1:81181304-81181323 | None:intergenic | 25.0% |
| ! | AATATTCTGCATGAAGAAAA+TGG | - | chr3_1:81181660-81181679 | None:intergenic | 25.0% |
| !! | CTAAATCTGCTTGAATTTTA+CGG | - | chr3_1:81181895-81181914 | None:intergenic | 25.0% |
| !!! | AAGTTTAATGTTTTAATGGG+CGG | + | chr3_1:81182054-81182073 | Msa0379790:intron | 25.0% |
| ! | ACATTAGATAGGATTAGAAA+TGG | + | chr3_1:81182084-81182103 | Msa0379790:intron | 25.0% |
| ! | TAATCTCTCTTTATGTGATT+TGG | + | chr3_1:81182161-81182180 | Msa0379790:intron | 25.0% |
| ! | CAATAAAGATATTTCCTACT+AGG | - | chr3_1:81182386-81182405 | None:intergenic | 25.0% |
| !!! | TTTTTGGGATTTTGTGAAAT+TGG | + | chr3_1:81182732-81182751 | Msa0379790:intron | 25.0% |
| ! | ATAAGTAACTCAATATTCAC+AGG | - | chr3_1:81182795-81182814 | None:intergenic | 25.0% |
| ! | AATCAAAATGCATATGATGT+TGG | + | chr3_1:81182829-81182848 | Msa0379790:intron | 25.0% |
| ! | ATTTGTTTCCTTCTTAGATT+AGG | - | chr3_1:81182871-81182890 | None:intergenic | 25.0% |
| ! | ATAAGAATCACTATAATAGG+AGG | + | chr3_1:81182889-81182908 | Msa0379790:intron | 25.0% |
| ! | TAAGAATCACTATAATAGGA+GGG | + | chr3_1:81182890-81182909 | Msa0379790:intron | 25.0% |
| ! | AGTCATAAATTTAGCGTTAT+TGG | + | chr3_1:81183175-81183194 | Msa0379790:intron | 25.0% |
| ! | GTCATAAATTTAGCGTTATT+GGG | + | chr3_1:81183176-81183195 | Msa0379790:intron | 25.0% |
| ! | TTAGACCACTTATATTTAGT+AGG | - | chr3_1:81183256-81183275 | None:intergenic | 25.0% |
| ! | TTATTCTCGTTTAATGAAAC+AGG | + | chr3_1:81183282-81183301 | Msa0379790:intron | 25.0% |
| ! | TCTTCACCATTAACTTTATA+CGG | - | chr3_1:81183487-81183506 | None:intergenic | 25.0% |
| !!! | TTTTTTAGGTTGCATTGTTT+TGG | - | chr3_1:81183719-81183738 | None:intergenic | 25.0% |
| ! | AGAAGAATATTCTCTTCTAA+GGG | - | chr3_1:81183934-81183953 | None:intergenic | 25.0% |
| ! | AAGAAGAATATTCTCTTCTA+AGG | - | chr3_1:81183935-81183954 | None:intergenic | 25.0% |
| ! | TTAGAAGAGAATATTCTTCT+TGG | + | chr3_1:81183934-81183953 | Msa0379790:CDS | 25.0% |
| ! | TAGAAGAGAATATTCTTCTT+GGG | + | chr3_1:81183935-81183954 | Msa0379790:CDS | 25.0% |
| TAACATTACGAATTTACCCT+TGG | - | chr3_1:81176764-81176783 | None:intergenic | 30.0% | |
| !!! | AAGATATGATGATTTTGGCT+TGG | - | chr3_1:81176817-81176836 | None:intergenic | 30.0% |
| ! | TCTGGAAGATATGATGATTT+TGG | - | chr3_1:81176822-81176841 | None:intergenic | 30.0% |
| !! | TTTCTTTTCCCTCTTTTTTG+AGG | + | chr3_1:81176898-81176917 | Msa0379790:intron | 30.0% |
| ! | TTACTTCGCCAAAACTTTTA+GGG | + | chr3_1:81176950-81176969 | Msa0379790:intron | 30.0% |
| CAAGTCTTCAATTTCAACAA+TGG | + | chr3_1:81177095-81177114 | Msa0379790:CDS | 30.0% | |
| AGGCTCAAAACTAGTAATAA+TGG | + | chr3_1:81177153-81177172 | Msa0379790:CDS | 30.0% | |
| ATACATGATGCTGAAAACTA+CGG | - | chr3_1:81177182-81177201 | None:intergenic | 30.0% | |
| TAAATTCAGAACGTTGAGTT+TGG | + | chr3_1:81177260-81177279 | Msa0379790:intron | 30.0% | |
| !! | AATTAGGTTTGAAAGCGTTT+AGG | + | chr3_1:81177407-81177426 | Msa0379790:intron | 30.0% |
| !! | TTTGAAAGCGTTTAGGTTAT+TGG | + | chr3_1:81177414-81177433 | Msa0379790:intron | 30.0% |
| GTAAAGTAACAGTTAGGTAT+AGG | - | chr3_1:81177458-81177477 | None:intergenic | 30.0% | |
| ! | TAGTGTTCTTTTAACAAGGT+CGG | + | chr3_1:81177668-81177687 | Msa0379790:intron | 30.0% |
| AATTAACAGGAAAAAGTGAG+AGG | - | chr3_1:81177694-81177713 | None:intergenic | 30.0% | |
| !!! | CTCACTTTTTCCTGTTAATT+CGG | + | chr3_1:81177694-81177713 | Msa0379790:intron | 30.0% |
| ACTATGAAATTGTGTTTGCT+AGG | + | chr3_1:81177788-81177807 | Msa0379790:intron | 30.0% | |
| TTTATGCCAAAAATCAGATG+GGG | - | chr3_1:81178119-81178138 | None:intergenic | 30.0% | |
| !!! | GTAGCTTGTTGCATATATTT+TGG | + | chr3_1:81178143-81178162 | Msa0379790:intron | 30.0% |
| GTAATTTAAGTGTGAGTTGT+TGG | + | chr3_1:81178502-81178521 | Msa0379790:intron | 30.0% | |
| AAGATGTGGTTTAATGATTC+TGG | + | chr3_1:81178681-81178700 | Msa0379790:intron | 30.0% | |
| ATCATTGAAATACCAAACGT+GGG | - | chr3_1:81178752-81178771 | None:intergenic | 30.0% | |
| TATCATTGAAATACCAAACG+TGG | - | chr3_1:81178753-81178772 | None:intergenic | 30.0% | |
| ! | CAATGATATTTTCTTTGGCA+TGG | + | chr3_1:81178765-81178784 | Msa0379790:intron | 30.0% |
| ATAGATACCAAAAGTTGGAT+GGG | - | chr3_1:81178891-81178910 | None:intergenic | 30.0% | |
| AATAGATACCAAAAGTTGGA+TGG | - | chr3_1:81178892-81178911 | None:intergenic | 30.0% | |
| TTTGGTATCTATTTATTGGC+AGG | + | chr3_1:81178899-81178918 | Msa0379790:intron | 30.0% | |
| AGAAAAAGGAAACAAATGCA+TGG | - | chr3_1:81178953-81178972 | None:intergenic | 30.0% | |
| ! | ATTTGTTTCCTTTTTCTCTG+AGG | + | chr3_1:81178956-81178975 | Msa0379790:intron | 30.0% |
| GCTGTTTAACATAATCTTAG+TGG | - | chr3_1:81179010-81179029 | None:intergenic | 30.0% | |
| GAATCAATCGAAGCAAAATA+GGG | - | chr3_1:81179230-81179249 | None:intergenic | 30.0% | |
| !! | ATTATTGCCTTTGCTGTTTA+TGG | + | chr3_1:81179261-81179280 | Msa0379790:CDS | 30.0% |
| !! | TTATTGCCTTTGCTGTTTAT+GGG | + | chr3_1:81179262-81179281 | Msa0379790:CDS | 30.0% |
| AATAAAAAAGGTTGGGAAGT+TGG | - | chr3_1:81179337-81179356 | None:intergenic | 30.0% | |
| !!! | GATTTGTGATACTTTTTCAG+AGG | + | chr3_1:81179420-81179439 | Msa0379790:intron | 30.0% |
| ATCGTAGCATTATTTGTTTC+AGG | + | chr3_1:81179590-81179609 | Msa0379790:intron | 30.0% | |
| TCGTAGCATTATTTGTTTCA+GGG | + | chr3_1:81179591-81179610 | Msa0379790:intron | 30.0% | |
| CATTTGCTTACTGTTTATCA+AGG | + | chr3_1:81179704-81179723 | Msa0379790:CDS | 30.0% | |
| TGATTATAGCATTGCATTGA+GGG | - | chr3_1:81179853-81179872 | None:intergenic | 30.0% | |
| !!! | CTTGCTTTTGGTTTTTGAAA+GGG | + | chr3_1:81180006-81180025 | Msa0379790:intron | 30.0% |
| ! | TCTGAATACACTGTAAGTTT+TGG | + | chr3_1:81180072-81180091 | Msa0379790:intron | 30.0% |
| ATAGTAGTTACTACCAGTTA+CGG | + | chr3_1:81180141-81180160 | Msa0379790:intron | 30.0% | |
| ! | GTTTTCAGCTTAATTCAACA+AGG | + | chr3_1:81180296-81180315 | Msa0379790:intron | 30.0% |
| ACAAGGTCAAAAATTCTTTC+TGG | + | chr3_1:81180313-81180332 | Msa0379790:CDS | 30.0% | |
| TAACTATTTCAGCAGTACTT+TGG | - | chr3_1:81180445-81180464 | None:intergenic | 30.0% | |
| CTAGACTAGAAATTACGATT+AGG | + | chr3_1:81180532-81180551 | Msa0379790:intron | 30.0% | |
| AGACAGTAGAAAATAAACAG+TGG | - | chr3_1:81180887-81180906 | None:intergenic | 30.0% | |
| CACAAAACACAATGAATATG+GGG | - | chr3_1:81180935-81180954 | None:intergenic | 30.0% | |
| CCACAAAACACAATGAATAT+GGG | - | chr3_1:81180936-81180955 | None:intergenic | 30.0% | |
| TCCACAAAACACAATGAATA+TGG | - | chr3_1:81180937-81180956 | None:intergenic | 30.0% | |
| GTATAATGATCCATACAACT+CGG | + | chr3_1:81181125-81181144 | Msa0379790:CDS | 30.0% | |
| TGGATTCAAACAAAGATTGA+GGG | + | chr3_1:81181166-81181185 | Msa0379790:CDS | 30.0% | |
| CTATATGTCAAATGATTGTG+GGG | - | chr3_1:81181302-81181321 | None:intergenic | 30.0% | |
| TTGCAGAATTAATGCAAAGA+AGG | - | chr3_1:81181350-81181369 | None:intergenic | 30.0% | |
| !! | TTTCATCTTTTTCTAGCATG+TGG | + | chr3_1:81181383-81181402 | Msa0379790:intron | 30.0% |
| !! | TTCATCTTTTTCTAGCATGT+GGG | + | chr3_1:81181384-81181403 | Msa0379790:intron | 30.0% |
| TTACATTTCTATCAGTCACT+TGG | + | chr3_1:81181527-81181546 | Msa0379790:CDS | 30.0% | |
| TACATATATGACACTGTCTT+TGG | + | chr3_1:81181826-81181845 | Msa0379790:intron | 30.0% | |
| !! | TTTGGGTTGTTATCTATGAT+AGG | + | chr3_1:81181931-81181950 | Msa0379790:intron | 30.0% |
| TTACTATGTTAACTGTGGTA+AGG | - | chr3_1:81181984-81182003 | None:intergenic | 30.0% | |
| AAAGGATCGTTAGTAAGATA+TGG | - | chr3_1:81182445-81182464 | None:intergenic | 30.0% | |
| ATATCTTACTAACGATCCTT+TGG | + | chr3_1:81182444-81182463 | Msa0379790:intron | 30.0% | |
| TATCAATATCTGCAATCCAA+AGG | - | chr3_1:81182463-81182482 | None:intergenic | 30.0% | |
| ! | TGTGAAAACTTCACATTTTG+AGG | + | chr3_1:81182491-81182510 | Msa0379790:CDS | 30.0% |
| AGTACTTTACCTTAACACAA+AGG | - | chr3_1:81182521-81182540 | None:intergenic | 30.0% | |
| !!! | TCCTGATTTTTTGTATATGC+CGG | + | chr3_1:81182622-81182641 | Msa0379790:intron | 30.0% |
| !! | TGTACTTGACTTCTGTTTTT+GGG | + | chr3_1:81182717-81182736 | Msa0379790:intron | 30.0% |
| !! | GATGTTGGTTTAAATAGTAC+AGG | + | chr3_1:81182844-81182863 | Msa0379790:intron | 30.0% |
| ! | TGTATATTTTCTGAACTGTC+CGG | - | chr3_1:81183372-81183391 | None:intergenic | 30.0% |
| ! | TGCAAAATTCTCATCACTTT+TGG | - | chr3_1:81183590-81183609 | None:intergenic | 30.0% |
| ! | AAAAGTGATGAGAATTTTGC+AGG | + | chr3_1:81183589-81183608 | Msa0379790:CDS | 30.0% |
| AGAAGAGAATATTCTTCTTG+GGG | + | chr3_1:81183936-81183955 | Msa0379790:CDS | 30.0% | |
| AAAAAGAACTCTTCCAATTG+AGG | + | chr3_1:81183975-81183994 | Msa0379790:CDS | 30.0% | |
| !! | TAGTCATTTTGCTTAGCATT+TGG | - | chr3_1:81184114-81184133 | None:intergenic | 30.0% |
| !!! | GACATTTTAGTTTATGCCTT+AGG | + | chr3_1:81184164-81184183 | Msa0379790:three_prime_UTR | 30.0% |
| TTGGTTGGAACTTCGAAAAA+GGG | - | chr3_1:81176593-81176612 | None:intergenic | 35.0% | |
| TTTGGTTGGAACTTCGAAAA+AGG | - | chr3_1:81176594-81176613 | None:intergenic | 35.0% | |
| ! | AAGGCAAAGAAGGTATGATT+TGG | - | chr3_1:81176733-81176752 | None:intergenic | 35.0% |
| GGCTTGGAAGAAATTAATAG+AGG | - | chr3_1:81176801-81176820 | None:intergenic | 35.0% | |
| GTTGTTGTCCTCAAAAAAGA+GGG | - | chr3_1:81176909-81176928 | None:intergenic | 35.0% | |
| ! | CTTACTTCGCCAAAACTTTT+AGG | + | chr3_1:81176949-81176968 | Msa0379790:intron | 35.0% |
| AGTTGAAAAGGTGAAGTGAT+TGG | + | chr3_1:81177052-81177071 | Msa0379790:five_prime_UTR | 35.0% | |
| GAGAAAATTGCATAGAACCT+GGG | - | chr3_1:81177125-81177144 | None:intergenic | 35.0% | |
| TACATGATGCTGAAAACTAC+GGG | - | chr3_1:81177181-81177200 | None:intergenic | 35.0% | |
| CTGTTTCATTTGACAGAATC+CGG | + | chr3_1:81177286-81177305 | Msa0379790:intron | 35.0% | |
| AAAAAACATACCAAAGTGCG+CGG | - | chr3_1:81177353-81177372 | None:intergenic | 35.0% | |
| CAGAGAGTAAAGTAACAGTT+AGG | - | chr3_1:81177464-81177483 | None:intergenic | 35.0% | |
| ! | CTGCTAGTGTTCTTTTAACA+AGG | + | chr3_1:81177664-81177683 | Msa0379790:CDS | 35.0% |
| ! | GGAAACTTTTCCGAATTAAC+AGG | - | chr3_1:81177707-81177726 | None:intergenic | 35.0% |
| GTCTTCTGAATTCATGTTAG+TGG | + | chr3_1:81177915-81177934 | Msa0379790:intron | 35.0% | |
| TTATGCCAAAAATCAGATGG+GGG | - | chr3_1:81178118-81178137 | None:intergenic | 35.0% | |
| GTCTTCTGAATTCGTGATAA+TGG | + | chr3_1:81178292-81178311 | Msa0379790:intron | 35.0% | |
| AGAGAAGCGAGCTAATTATT+AGG | + | chr3_1:81178386-81178405 | Msa0379790:intron | 35.0% | |
| CAATATCCCACATTGATATG+TGG | - | chr3_1:81178460-81178479 | None:intergenic | 35.0% | |
| ATGTGGGATATTGATGTTTG+AGG | + | chr3_1:81178467-81178486 | Msa0379790:intron | 35.0% | |
| TGTGGGATATTGATGTTTGA+GGG | + | chr3_1:81178468-81178487 | Msa0379790:intron | 35.0% | |
| GATATTGATGTTTGAGGGAA+GGG | + | chr3_1:81178473-81178492 | Msa0379790:intron | 35.0% | |
| ! | ACTAAGTGCCTTAAGGTTTT+AGG | + | chr3_1:81178656-81178675 | Msa0379790:intron | 35.0% |
| CATCTTCACCTAAAACCTTA+AGG | - | chr3_1:81178667-81178686 | None:intergenic | 35.0% | |
| !!! | TAAGGTTTTAGGTGAAGATG+TGG | + | chr3_1:81178667-81178686 | Msa0379790:intron | 35.0% |
| TCATTGAAATACCAAACGTG+GGG | - | chr3_1:81178751-81178770 | None:intergenic | 35.0% | |
| TAGTGTCAAACCAAGTTGTA+TGG | + | chr3_1:81178849-81178868 | Msa0379790:intron | 35.0% | |
| TAGATACCAAAAGTTGGATG+GGG | - | chr3_1:81178890-81178909 | None:intergenic | 35.0% | |
| TATTCACTCCTCAGAGAAAA+AGG | - | chr3_1:81178967-81178986 | None:intergenic | 35.0% | |
| TCTGAGGAGTGAATATAGAT+TGG | + | chr3_1:81178972-81178991 | Msa0379790:intron | 35.0% | |
| GGAATCAATCGAAGCAAAAT+AGG | - | chr3_1:81179231-81179250 | None:intergenic | 35.0% | |
| AGCAAAGGCAATAATACCAA+GGG | - | chr3_1:81179256-81179275 | None:intergenic | 35.0% | |
| !! | TCAGAAAAGGTGCTAATTGT+TGG | - | chr3_1:81179402-81179421 | None:intergenic | 35.0% |
| AGCCATTATTATTGTGGACT+GGG | + | chr3_1:81179498-81179517 | Msa0379790:CDS | 35.0% | |
| TGAATCATGACTAGCAGAAT+AGG | + | chr3_1:81179741-81179760 | Msa0379790:intron | 35.0% | |
| GATTATAGCATTGCATTGAG+GGG | - | chr3_1:81179852-81179871 | None:intergenic | 35.0% | |
| CTGATTATAGCATTGCATTG+AGG | - | chr3_1:81179854-81179873 | None:intergenic | 35.0% | |
| CTATAAGAGACCAAAGACTA+GGG | - | chr3_1:81179906-81179925 | None:intergenic | 35.0% | |
| ACTATAAGAGACCAAAGACT+AGG | - | chr3_1:81179907-81179926 | None:intergenic | 35.0% | |
| !!! | GCTTGCTTTTGGTTTTTGAA+AGG | + | chr3_1:81180005-81180024 | Msa0379790:intron | 35.0% |
| !! | GGTTTTTGAAAGGGTACAAA+TGG | + | chr3_1:81180015-81180034 | Msa0379790:intron | 35.0% |
| GCTTAAAAGACCACAGATTA+AGG | + | chr3_1:81180109-81180128 | Msa0379790:intron | 35.0% | |
| AGGTCAAAAATTCTTTCTGG+AGG | + | chr3_1:81180316-81180335 | Msa0379790:CDS | 35.0% | |
| ACATACATTTCTTGCATCAC+TGG | - | chr3_1:81180351-81180370 | None:intergenic | 35.0% | |
| ACTTTGGCAGAGAAACATTA+TGG | - | chr3_1:81180429-81180448 | None:intergenic | 35.0% | |
| AAGCAATATACACTGCTGTT+TGG | + | chr3_1:81180751-81180770 | Msa0379790:CDS | 35.0% | |
| ! | AGCAATATACACTGCTGTTT+GGG | + | chr3_1:81180752-81180771 | Msa0379790:CDS | 35.0% |
| TCATTATTCATGGAGTTGCT+AGG | + | chr3_1:81180786-81180805 | Msa0379790:CDS | 35.0% | |
| ! | CCCATATTCATTGTGTTTTG+TGG | + | chr3_1:81180933-81180952 | Msa0379790:intron | 35.0% |
| ATATAAATGGCCGAGTTGTA+TGG | - | chr3_1:81181138-81181157 | None:intergenic | 35.0% | |
| GGCCATTTATATTGAATGAG+TGG | + | chr3_1:81181146-81181165 | Msa0379790:CDS | 35.0% | |
| GTGGATTCAAACAAAGATTG+AGG | + | chr3_1:81181165-81181184 | Msa0379790:CDS | 35.0% | |
| GGATTCAAACAAAGATTGAG+GGG | + | chr3_1:81181167-81181186 | Msa0379790:CDS | 35.0% | |
| ! | GGAAATGCATTGATGGTAAT+AGG | - | chr3_1:81181329-81181348 | None:intergenic | 35.0% |
| CAAAGAAGGAAATGCATTGA+TGG | - | chr3_1:81181336-81181355 | None:intergenic | 35.0% | |
| TCATCACCTCTAATAATGGT+TGG | - | chr3_1:81181420-81181439 | None:intergenic | 35.0% | |
| ACGATCATCACCTCTAATAA+TGG | - | chr3_1:81181424-81181443 | None:intergenic | 35.0% | |
| TTGACAGTGAACTTGTGATT+AGG | - | chr3_1:81181462-81181481 | None:intergenic | 35.0% | |
| ATCTGACTCAGAAATCTCAT+TGG | + | chr3_1:81181493-81181512 | Msa0379790:CDS | 35.0% | |
| TTTCTCATGCTTTAACAACC+TGG | + | chr3_1:81181580-81181599 | Msa0379790:intron | 35.0% | |
| TCTGCATGAAGAAAATGGAA+TGG | - | chr3_1:81181655-81181674 | None:intergenic | 35.0% | |
| TTTGGCTAAAAATCCTCAAG+TGG | + | chr3_1:81181700-81181719 | Msa0379790:CDS | 35.0% | |
| TATATGACACTGTCTTTGGT+TGG | + | chr3_1:81181830-81181849 | Msa0379790:intron | 35.0% | |
| ATATGACACTGTCTTTGGTT+GGG | + | chr3_1:81181831-81181850 | Msa0379790:intron | 35.0% | |
| AGTCAAATGAGAGAATGCTT+TGG | + | chr3_1:81181913-81181932 | Msa0379790:intron | 35.0% | |
| GTCAAATGAGAGAATGCTTT+GGG | + | chr3_1:81181914-81181933 | Msa0379790:intron | 35.0% | |
| CATCAACATTCATGCAACAT+AGG | - | chr3_1:81182012-81182031 | None:intergenic | 35.0% | |
| CTATGTTGCATGAATGTTGA+TGG | + | chr3_1:81182010-81182029 | Msa0379790:intron | 35.0% | |
| !! | AAGTTTTGGTGGCACTTTTT+TGG | + | chr3_1:81182125-81182144 | Msa0379790:intron | 35.0% |
| !!! | AGTTTTGGTGGCACTTTTTT+GGG | + | chr3_1:81182126-81182145 | Msa0379790:intron | 35.0% |
| !!! | GCACTTTTTTGGGAAAAAGA+TGG | + | chr3_1:81182136-81182155 | Msa0379790:intron | 35.0% |
| !! | TTATGTGATTTGGTCAAGTG+TGG | + | chr3_1:81182171-81182190 | Msa0379790:intron | 35.0% |
| ! | GACTTGTAAAAAGTGCAATG+AGG | + | chr3_1:81182198-81182217 | Msa0379790:intron | 35.0% |
| ! | AGGAGAGTATATCGAATAGA+GGG | + | chr3_1:81182218-81182237 | Msa0379790:intron | 35.0% |
| !! | ATCTAGTCTTGTCAATGGTT+TGG | - | chr3_1:81182286-81182305 | None:intergenic | 35.0% |
| AACCATTGACAAGACTAGAT+TGG | + | chr3_1:81182286-81182305 | Msa0379790:intron | 35.0% | |
| !! | AACCAATCTAGTCTTGTCAA+TGG | - | chr3_1:81182291-81182310 | None:intergenic | 35.0% |
| TGTTTGATGTCTTTGATCCA+TGG | + | chr3_1:81182344-81182363 | Msa0379790:intron | 35.0% | |
| ATAAGAAACTGCAATTGCCT+CGG | - | chr3_1:81182550-81182569 | None:intergenic | 35.0% | |
| ! | CTGTACTTGACTTCTGTTTT+TGG | + | chr3_1:81182716-81182735 | Msa0379790:intron | 35.0% |
| AGAATCAGTCATTTACTGAC+TGG | - | chr3_1:81183000-81183019 | None:intergenic | 35.0% | |
| AAAGTTCCAAGAAGTCAAGA+TGG | - | chr3_1:81183110-81183129 | None:intergenic | 35.0% | |
| TTCTCGTTTAATGAAACAGG+AGG | + | chr3_1:81183285-81183304 | Msa0379790:intron | 35.0% | |
| ! | GTGGTTCTATTAGTAAGAAC+GGG | - | chr3_1:81183465-81183484 | None:intergenic | 35.0% |
| ! | GGTGGTTCTATTAGTAAGAA+CGG | - | chr3_1:81183466-81183485 | None:intergenic | 35.0% |
| GAACCACCGTATAAAGTTAA+TGG | + | chr3_1:81183478-81183497 | Msa0379790:CDS | 35.0% | |
| TCACCATTAACTTTATACGG+TGG | - | chr3_1:81183484-81183503 | None:intergenic | 35.0% | |
| !!! | TTTAGGTTGCATTGTTTTGG+AGG | - | chr3_1:81183716-81183735 | None:intergenic | 35.0% |
| CAACCTAAAAAAGAAACTGC+AGG | + | chr3_1:81183727-81183746 | Msa0379790:CDS | 35.0% | |
| !!! | TCTCCTGCAGTTTCTTTTTT+AGG | - | chr3_1:81183733-81183752 | None:intergenic | 35.0% |
| GACTCATGGTTAGTAATAAC+AGG | - | chr3_1:81183823-81183842 | None:intergenic | 35.0% | |
| GCAAGATGAAGAGAAATCTT+CGG | + | chr3_1:81183885-81183904 | Msa0379790:CDS | 35.0% | |
| ! | AGAATATTCTCTTCTAAGGG+AGG | - | chr3_1:81183931-81183950 | None:intergenic | 35.0% |
| GGATTCATTTCTTCCTCAAT+TGG | - | chr3_1:81183991-81184010 | None:intergenic | 35.0% | |
| AATGAATCCATCTCCTAACT+CGG | + | chr3_1:81184002-81184021 | Msa0379790:CDS | 35.0% | |
| TTCTTATCTTTGTTAGCAGG+AGG | - | chr3_1:81184069-81184088 | None:intergenic | 35.0% | |
| TCCTGCTAACAAAGATAAGA+AGG | + | chr3_1:81184068-81184087 | Msa0379790:CDS | 35.0% | |
| TCCTTCTTATCTTTGTTAGC+AGG | - | chr3_1:81184072-81184091 | None:intergenic | 35.0% | |
| GCTAACAAAGATAAGAAGGA+TGG | + | chr3_1:81184072-81184091 | Msa0379790:CDS | 35.0% | |
| CTTAGCATTTGGAAATGAAG+AGG | - | chr3_1:81184103-81184122 | None:intergenic | 35.0% | |
| GCTAAGCAAAATGACTAGAT+TGG | + | chr3_1:81184117-81184136 | Msa0379790:exon | 35.0% | |
| ! | TTCTGAAGAACTTCAACCTA+AGG | - | chr3_1:81184183-81184202 | None:intergenic | 35.0% |
| !!! | TCCAGCTGTCTTTTTTAAGT+TGG | + | chr3_1:81184208-81184227 | Msa0379790:three_prime_UTR | 35.0% |
| TCCAACTTAAAAAAGACAGC+TGG | - | chr3_1:81184212-81184231 | None:intergenic | 35.0% | |
| CAACACTTATGTCAGATTCT+CGG | - | chr3_1:81184337-81184356 | None:intergenic | 35.0% | |
| ! | CATCTCCTTTAGAGATGATT+TGG | + | chr3_1:81184411-81184430 | Msa0379790:three_prime_UTR | 35.0% |
| TTGCTCCAAATCATCTCTAA+AGG | - | chr3_1:81184419-81184438 | None:intergenic | 35.0% | |
| TTATTCATTTATGTGGCGCC+TGG | - | chr3_1:81176543-81176562 | None:intergenic | 40.0% | |
| ! | TTTGCCTTTTCTTCCTCCAA+GGG | + | chr3_1:81176745-81176764 | Msa0379790:five_prime_UTR | 40.0% |
| TTTACCCTTGGAGGAAGAAA+AGG | - | chr3_1:81176752-81176771 | None:intergenic | 40.0% | |
| CATTACGAATTTACCCTTGG+AGG | - | chr3_1:81176761-81176780 | None:intergenic | 40.0% | |
| CGTTGTTGTCCTCAAAAAAG+AGG | - | chr3_1:81176910-81176929 | None:intergenic | 40.0% | |
| TCAATGCCACGGTTTCTTAA+CGG | - | chr3_1:81177033-81177052 | None:intergenic | 40.0% | |
| ! | ACCTTTTCAACTCAATGCCA+CGG | - | chr3_1:81177044-81177063 | None:intergenic | 40.0% |
| CGAGAAAATTGCATAGAACC+TGG | - | chr3_1:81177126-81177145 | None:intergenic | 40.0% | |
| ! | TGCAATTTTCTCGTGACGTT+AGG | + | chr3_1:81177133-81177152 | Msa0379790:CDS | 40.0% |
| ACATGATGCTGAAAACTACG+GGG | - | chr3_1:81177180-81177199 | None:intergenic | 40.0% | |
| ! | AAAGCGTTTAGGTTATTGGC+TGG | + | chr3_1:81177418-81177437 | Msa0379790:intron | 40.0% |
| ! | TTTAGGTTATTGGCTGGAGT+TGG | + | chr3_1:81177424-81177443 | Msa0379790:intron | 40.0% |
| ! | TTAGGTTATTGGCTGGAGTT+GGG | + | chr3_1:81177425-81177444 | Msa0379790:intron | 40.0% |
| ! | TTGTCACACCATCTTTTACG+TGG | + | chr3_1:81177537-81177556 | Msa0379790:CDS | 40.0% |
| ACAAAAACACTGCACCTAGA+TGG | - | chr3_1:81177588-81177607 | None:intergenic | 40.0% | |
| TACTTCCAGACAATAAGCAC+AGG | - | chr3_1:81177955-81177974 | None:intergenic | 40.0% | |
| ACTCATCTTTAAACCACCAG+AGG | + | chr3_1:81178042-81178061 | Msa0379790:intron | 40.0% | |
| CTATAATCAGCTTGCAGTTG+TGG | + | chr3_1:81178320-81178339 | Msa0379790:intron | 40.0% | |
| GGATATTGATGTTTGAGGGA+AGG | + | chr3_1:81178472-81178491 | Msa0379790:intron | 40.0% | |
| GTTCCACGTCGGATAATAAT+TGG | + | chr3_1:81178524-81178543 | Msa0379790:intron | 40.0% | |
| TAGCCAATTATTATCCGACG+TGG | - | chr3_1:81178530-81178549 | None:intergenic | 40.0% | |
| AATGACTAGTAAGTAGCAGG+TGG | - | chr3_1:81178825-81178844 | None:intergenic | 40.0% | |
| ACGAATGACTAGTAAGTAGC+AGG | - | chr3_1:81178828-81178847 | None:intergenic | 40.0% | |
| CTGAGAGTAACCATACAACT+TGG | - | chr3_1:81178862-81178881 | None:intergenic | 40.0% | |
| AGATACCAAAAGTTGGATGG+GGG | - | chr3_1:81178889-81178908 | None:intergenic | 40.0% | |
| ! | TGGCAGGTTGACATATATTC+TGG | + | chr3_1:81178915-81178934 | Msa0379790:intron | 40.0% |
| CAGCAAAGGCAATAATACCA+AGG | - | chr3_1:81179257-81179276 | None:intergenic | 40.0% | |
| CTCAATCCCATAAACAGCAA+AGG | - | chr3_1:81179271-81179290 | None:intergenic | 40.0% | |
| CAGCCATTATTATTGTGGAC+TGG | + | chr3_1:81179497-81179516 | Msa0379790:CDS | 40.0% | |
| ! | GCCATTATTATTGTGGACTG+GGG | + | chr3_1:81179499-81179518 | Msa0379790:CDS | 40.0% |
| ACAAAGCAGAAAACCGTAAC+TGG | - | chr3_1:81180157-81180176 | None:intergenic | 40.0% | |
| AACATTATGGACACGTCAAG+TGG | - | chr3_1:81180416-81180435 | None:intergenic | 40.0% | |
| TTGCTTTCCCAGCAAAATCA+AGG | - | chr3_1:81180737-81180756 | None:intergenic | 40.0% | |
| ! | TGCTGCTGTGTCATTATTCA+TGG | + | chr3_1:81180776-81180795 | Msa0379790:CDS | 40.0% |
| ! | AACAAAGATTGAGGGGTATG+AGG | + | chr3_1:81181174-81181193 | Msa0379790:CDS | 40.0% |
| TGGTCACCAACCATTATTAG+AGG | + | chr3_1:81181411-81181430 | Msa0379790:CDS | 40.0% | |
| TATTAGAGGTGATGATCGTG+AGG | + | chr3_1:81181425-81181444 | Msa0379790:CDS | 40.0% | |
| GCATCAGAAATTGTTTGACC+AGG | - | chr3_1:81181601-81181620 | None:intergenic | 40.0% | |
| TATTGTAGCTGATATGCGCA+AGG | + | chr3_1:81181676-81181695 | Msa0379790:CDS | 40.0% | |
| AATTTCTGTTGCTCCACTTG+AGG | - | chr3_1:81181716-81181735 | None:intergenic | 40.0% | |
| AGCAACAGAAATTGCACAGA+AGG | + | chr3_1:81181723-81181742 | Msa0379790:CDS | 40.0% | |
| GCAACAGAAATTGCACAGAA+GGG | + | chr3_1:81181724-81181743 | Msa0379790:CDS | 40.0% | |
| ! | ATTGCACAGAAGGGTCTTTT+TGG | + | chr3_1:81181733-81181752 | Msa0379790:CDS | 40.0% |
| ! | TCCTGAAAACACAGCTCTAA+AGG | + | chr3_1:81181766-81181785 | Msa0379790:CDS | 40.0% |
| !!! | ACCTTTAGAGCTGTGTTTTC+AGG | - | chr3_1:81181770-81181789 | None:intergenic | 40.0% |
| GGTCTATTGCACGTAATGAT+AGG | + | chr3_1:81181852-81181871 | Msa0379790:intron | 40.0% | |
| ATGATAGGTTAGTGCGACTA+AGG | + | chr3_1:81181946-81181965 | Msa0379790:intron | 40.0% | |
| TTAGTGCGACTAAGGCATAA+GGG | + | chr3_1:81181954-81181973 | Msa0379790:intron | 40.0% | |
| ! | GAGGAGAGTATATCGAATAG+AGG | + | chr3_1:81182217-81182236 | Msa0379790:intron | 40.0% |
| TAGAGGGCTGTCTAATAGTT+AGG | + | chr3_1:81182234-81182253 | Msa0379790:intron | 40.0% | |
| AGAGAGACCTAGAAAACTAG+AGG | + | chr3_1:81182260-81182279 | Msa0379790:intron | 40.0% | |
| !! | TGAGGAGTACCTTTGTGTTA+AGG | + | chr3_1:81182509-81182528 | Msa0379790:CDS | 40.0% |
| TAAGAAACTGCAATTGCCTC+GGG | - | chr3_1:81182549-81182568 | None:intergenic | 40.0% | |
| GAGGCAATTGCAGTTTCTTA+TGG | + | chr3_1:81182549-81182568 | Msa0379790:intron | 40.0% | |
| GCCGGCATATACAAAAAATC+AGG | - | chr3_1:81182626-81182645 | None:intergenic | 40.0% | |
| GTACAGGTCCTAATCTAAGA+AGG | + | chr3_1:81182860-81182879 | Msa0379790:intron | 40.0% | |
| TATGTGCCATCTTGACTTCT+TGG | + | chr3_1:81183101-81183120 | Msa0379790:intron | 40.0% | |
| ! | CAACTCTGAGAAGATCCAAA+AGG | - | chr3_1:81183315-81183334 | None:intergenic | 40.0% |
| ! | ATTTTCTGAACTGTCCGGAT+GGG | - | chr3_1:81183367-81183386 | None:intergenic | 40.0% |
| ! | TATTTTCTGAACTGTCCGGA+TGG | - | chr3_1:81183368-81183387 | None:intergenic | 40.0% |
| CCTCGGAAAATATACCCTTT+GGG | + | chr3_1:81183401-81183420 | Msa0379790:CDS | 40.0% | |
| CTCGGAAAATATACCCTTTG+GGG | + | chr3_1:81183402-81183421 | Msa0379790:CDS | 40.0% | |
| GTGAAAATGGAATCCCCAAA+GGG | - | chr3_1:81183418-81183437 | None:intergenic | 40.0% | |
| AGTGAAAATGGAATCCCCAA+AGG | - | chr3_1:81183419-81183438 | None:intergenic | 40.0% | |
| CAATGAGGAAAAAGATGCCA+AGG | + | chr3_1:81183540-81183559 | Msa0379790:CDS | 40.0% | |
| TCCATCTAGTGTAAACTCCA+AGG | + | chr3_1:81183624-81183643 | Msa0379790:CDS | 40.0% | |
| TCCTTGGAGTTTACACTAGA+TGG | - | chr3_1:81183628-81183647 | None:intergenic | 40.0% | |
| !! | CTTTGACTTGGACTTATCCT+TGG | - | chr3_1:81183644-81183663 | None:intergenic | 40.0% |
| TTGAGCATCAGACTTTGACT+TGG | - | chr3_1:81183656-81183675 | None:intergenic | 40.0% | |
| ACTATCAGAACCCATGTTCT+GGG | - | chr3_1:81183680-81183699 | None:intergenic | 40.0% | |
| AACTATCAGAACCCATGTTC+TGG | - | chr3_1:81183681-81183700 | None:intergenic | 40.0% | |
| AAAAGAAACTGCAGGAGATG+TGG | + | chr3_1:81183735-81183754 | Msa0379790:CDS | 40.0% | |
| AAAGAAACTGCAGGAGATGT+GGG | + | chr3_1:81183736-81183755 | Msa0379790:CDS | 40.0% | |
| AGAAACTACACTATGTGCAG+GGG | - | chr3_1:81183791-81183810 | None:intergenic | 40.0% | |
| CAGAAACTACACTATGTGCA+GGG | - | chr3_1:81183792-81183811 | None:intergenic | 40.0% | |
| TCAGAAACTACACTATGTGC+AGG | - | chr3_1:81183793-81183812 | None:intergenic | 40.0% | |
| TTACTAACCATGAGTCTAGC+AGG | + | chr3_1:81183827-81183846 | Msa0379790:CDS | 40.0% | |
| TACTAACCATGAGTCTAGCA+GGG | + | chr3_1:81183828-81183847 | Msa0379790:CDS | 40.0% | |
| GCATTTGGAAATGAAGAGGT+TGG | - | chr3_1:81184099-81184118 | None:intergenic | 40.0% | |
| TTATGTCAGATTCTCGGAGT+AGG | - | chr3_1:81184331-81184350 | None:intergenic | 40.0% | |
| TTATGTGGCGCCTGGAAATA+TGG | - | chr3_1:81176535-81176554 | None:intergenic | 45.0% | |
| AATTAACCCCTCCCTTGACT+TGG | + | chr3_1:81176678-81176697 | Msa0379790:five_prime_UTR | 45.0% | |
| GGAGGAAGAAAAGGCAAAGA+AGG | - | chr3_1:81176743-81176762 | None:intergenic | 45.0% | |
| ! | CTTTGCCTTTTCTTCCTCCA+AGG | + | chr3_1:81176744-81176763 | Msa0379790:five_prime_UTR | 45.0% |
| AATGCCACGGTTTCTTAACG+GGG | - | chr3_1:81177031-81177050 | None:intergenic | 45.0% | |
| CAATGCCACGGTTTCTTAAC+GGG | - | chr3_1:81177032-81177051 | None:intergenic | 45.0% | |
| !! | ACCGTGGCATTGAGTTGAAA+AGG | + | chr3_1:81177040-81177059 | Msa0379790:five_prime_UTR | 45.0% |
| ATTTCAACAATGGCGTACCC+AGG | + | chr3_1:81177105-81177124 | Msa0379790:CDS | 45.0% | |
| ! | GAATCTTTTACCGCGCACTT+TGG | + | chr3_1:81177340-81177359 | Msa0379790:CDS | 45.0% |
| CGTGTACTCCACGTAAAAGA+TGG | - | chr3_1:81177548-81177567 | None:intergenic | 45.0% | |
| ATCAGCCTGTGCTTATTGTC+TGG | + | chr3_1:81177947-81177966 | Msa0379790:intron | 45.0% | |
| AAAATCAGATGGGGGTAGGA+GGG | - | chr3_1:81178110-81178129 | None:intergenic | 45.0% | |
| AAAAATCAGATGGGGGTAGG+AGG | - | chr3_1:81178111-81178130 | None:intergenic | 45.0% | |
| ! | TCCTACCCCCATCTGATTTT+TGG | + | chr3_1:81178110-81178129 | Msa0379790:intron | 45.0% |
| ATCAGCTTGCAGTTGTGGTT+TGG | + | chr3_1:81178325-81178344 | Msa0379790:intron | 45.0% | |
| ATTAGGACCCTTAAGAGACC+AGG | + | chr3_1:81178403-81178422 | Msa0379790:intron | 45.0% | |
| GTGATGTCCTGGTCTCTTAA+GGG | - | chr3_1:81178413-81178432 | None:intergenic | 45.0% | |
| TGTGATGTCCTGGTCTCTTA+AGG | - | chr3_1:81178414-81178433 | None:intergenic | 45.0% | |
| TCGACGCCACATATCAATGT+GGG | + | chr3_1:81178451-81178470 | Msa0379790:intron | 45.0% | |
| CACACACACTAAGTGCCTTA+AGG | + | chr3_1:81178649-81178668 | Msa0379790:intron | 45.0% | |
| GAGAGCAACAACGAGCTAAT+GGG | - | chr3_1:81178713-81178732 | None:intergenic | 45.0% | |
| AAGGCAATAATACCAAGGGC+TGG | - | chr3_1:81179252-81179271 | None:intergenic | 45.0% | |
| GCCCCAGTCCACAATAATAA+TGG | - | chr3_1:81179503-81179522 | None:intergenic | 45.0% | |
| TCAACACTGTCAGGCACTTA+CGG | - | chr3_1:81179567-81179586 | None:intergenic | 45.0% | |
| TACGATCAGTCAACACTGTC+AGG | - | chr3_1:81179576-81179595 | None:intergenic | 45.0% | |
| ! | GTCTGAGATGGCAGGATTAT+TGG | - | chr3_1:81179625-81179644 | None:intergenic | 45.0% |
| AGACCACAGATTAAGGACGA+TGG | + | chr3_1:81180116-81180135 | Msa0379790:intron | 45.0% | |
| GACCACAGATTAAGGACGAT+GGG | + | chr3_1:81180117-81180136 | Msa0379790:intron | 45.0% | |
| TTCCCATCGTCCTTAATCTG+TGG | - | chr3_1:81180122-81180141 | None:intergenic | 45.0% | |
| ! | AGATGGGCCTTGATTTTGCT+GGG | + | chr3_1:81180727-81180746 | Msa0379790:intron | 45.0% |
| TAGGTTTCTCCACACAGAAG+TGG | + | chr3_1:81180805-81180824 | Msa0379790:CDS | 45.0% | |
| AGCAGTTAACCACTTCTGTG+TGG | - | chr3_1:81180817-81180836 | None:intergenic | 45.0% | |
| ACACAGAAGTGGTTAACTGC+TGG | + | chr3_1:81180816-81180835 | Msa0379790:CDS | 45.0% | |
| TGGTTAACTGCTGGTGGTTT+GGG | + | chr3_1:81180825-81180844 | Msa0379790:CDS | 45.0% | |
| ACAGTATTGCTCACTCTTGC+CGG | + | chr3_1:81180849-81180868 | Msa0379790:CDS | 45.0% | |
| ! | ATTGAGGGGTATGAGGTTTC+TGG | + | chr3_1:81181181-81181200 | Msa0379790:CDS | 45.0% |
| !! | TCTTTTTCTAGCATGTGGGC+TGG | + | chr3_1:81181388-81181407 | Msa0379790:intron | 45.0% |
| ! | AGCTGATATGCGCAAGGTTT+TGG | + | chr3_1:81181682-81181701 | Msa0379790:CDS | 45.0% |
| GTTAGTGCGACTAAGGCATA+AGG | + | chr3_1:81181953-81181972 | Msa0379790:intron | 45.0% | |
| TAGTGCGACTAAGGCATAAG+GGG | + | chr3_1:81181955-81181974 | Msa0379790:intron | 45.0% | |
| !!! | GGTTTGGCCTCTAGTTTTCT+AGG | - | chr3_1:81182270-81182289 | None:intergenic | 45.0% |
| TCTACTTAGCTCAGCCTAGT+AGG | + | chr3_1:81182369-81182388 | Msa0379790:intron | 45.0% | |
| ! | GGTAAAGTACTACATACCCG+AGG | + | chr3_1:81182530-81182549 | Msa0379790:intron | 45.0% |
| AAGGCAAAGATACCAAACCG+TGG | - | chr3_1:81183032-81183051 | None:intergenic | 45.0% | |
| AACTTTCATGCTCCCTTGCA+GGG | + | chr3_1:81183124-81183143 | Msa0379790:intron | 45.0% | |
| !!! | CTCTTTTTTCACCCCTGCAA+GGG | - | chr3_1:81183139-81183158 | None:intergenic | 45.0% |
| !!! | ACTCTTTTTTCACCCCTGCA+AGG | - | chr3_1:81183140-81183159 | None:intergenic | 45.0% |
| ! | GAAACAGGAGGCAATCCTTT+TGG | + | chr3_1:81183297-81183316 | Msa0379790:intron | 45.0% |
| AATATACAGTGAGCCTGCCT+CGG | + | chr3_1:81183384-81183403 | Msa0379790:CDS | 45.0% | |
| !! | AAGGGTATATTTTCCGAGGC+AGG | - | chr3_1:81183400-81183419 | None:intergenic | 45.0% |
| GCCTCGGAAAATATACCCTT+TGG | + | chr3_1:81183400-81183419 | Msa0379790:CDS | 45.0% | |
| !! | CCCAAAGGGTATATTTTCCG+AGG | - | chr3_1:81183404-81183423 | None:intergenic | 45.0% |
| ! | TGCTCTGGATCGAGTGAAAA+TGG | - | chr3_1:81183431-81183450 | None:intergenic | 45.0% |
| TGATGCTCAAACCCAGAACA+TGG | + | chr3_1:81183666-81183685 | Msa0379790:CDS | 45.0% | |
| GATGCTCAAACCCAGAACAT+GGG | + | chr3_1:81183667-81183686 | Msa0379790:CDS | 45.0% | |
| ! | CATGGGTTCTGATAGTTCAG+TGG | + | chr3_1:81183684-81183703 | Msa0379790:CDS | 45.0% |
| ! | ACACTATGTGCAGGGGTTTT+AGG | - | chr3_1:81183784-81183803 | None:intergenic | 45.0% |
| GGAGGTTTAACTGCTGATGA+TGG | - | chr3_1:81183913-81183932 | None:intergenic | 45.0% | |
| !! | CACAAGAGTTTGCTGTCCAA+CGG | + | chr3_1:81184031-81184050 | Msa0379790:CDS | 45.0% |
| !! | AGTTTGCTGTCCAACGGAAT+GGG | + | chr3_1:81184037-81184056 | Msa0379790:CDS | 45.0% |
| AGATTCTCGGAGTAGGAAAC+AGG | - | chr3_1:81184324-81184343 | None:intergenic | 45.0% | |
| !! | GTAATTAAAATTAAAATATT+TGG | - | chr3_1:81176612-81176631 | None:intergenic | 5.0% |
| !!! | AGTTATTTTTATTTATTAAA+TGG | + | chr3_1:81181271-81181290 | Msa0379790:intron | 5.0% |
| !!! | GTTATTTTTATTTATTAAAT+GGG | + | chr3_1:81181272-81181291 | Msa0379790:intron | 5.0% |
| !!! | ATTAAACTTATTTTTTTAAA+AGG | - | chr3_1:81182043-81182062 | None:intergenic | 5.0% |
| TCCTCATCCAAGTCAAGGGA+GGG | - | chr3_1:81176688-81176707 | None:intergenic | 50.0% | |
| CTCCTCCTCATCCAAGTCAA+GGG | - | chr3_1:81176692-81176711 | None:intergenic | 50.0% | |
| GTAACCCCGTTAAGAAACCG+TGG | + | chr3_1:81177024-81177043 | Msa0379790:five_prime_UTR | 50.0% | |
| TCATTTGACAGAATCCGGCG+CGG | + | chr3_1:81177291-81177310 | Msa0379790:intron | 50.0% | |
| AGTGCGCGGTAAAAGATTCG+TGG | - | chr3_1:81177339-81177358 | None:intergenic | 50.0% | |
| ! | TAGATGGCGCATGCCTTGTT+GGG | - | chr3_1:81177572-81177591 | None:intergenic | 50.0% |
| GTTTGACACTAGACGACCTC+TGG | - | chr3_1:81178061-81178080 | None:intergenic | 50.0% | |
| AAATCAGATGGGGGTAGGAG+GGG | - | chr3_1:81178109-81178128 | None:intergenic | 50.0% | |
| GCCAAAAATCAGATGGGGGT+AGG | - | chr3_1:81178114-81178133 | None:intergenic | 50.0% | |
| CACATTGATATGTGGCGTCG+AGG | - | chr3_1:81178452-81178471 | None:intergenic | 50.0% | |
| CTCGACGCCACATATCAATG+TGG | + | chr3_1:81178450-81178469 | Msa0379790:intron | 50.0% | |
| !! | GTGAGTTGTTGGTTCCACGT+CGG | + | chr3_1:81178513-81178532 | Msa0379790:intron | 50.0% |
| CGAGAGCAACAACGAGCTAA+TGG | - | chr3_1:81178714-81178733 | None:intergenic | 50.0% | |
| TACCAAACGTGGGGAGTCTT+GGG | - | chr3_1:81178742-81178761 | None:intergenic | 50.0% | |
| ATACCAAACGTGGGGAGTCT+TGG | - | chr3_1:81178743-81178762 | None:intergenic | 50.0% | |
| ! | CTTCGATTGATTCCAGCCCT+TGG | + | chr3_1:81179237-81179256 | Msa0379790:CDS | 50.0% |
| ATCCTGCTGAGACGAAGTAG+TGG | - | chr3_1:81179294-81179313 | None:intergenic | 50.0% | |
| TTCAGAGGACTGACAGCAGT+TGG | + | chr3_1:81179435-81179454 | Msa0379790:intron | 50.0% | |
| CAACACTGTCAGGCACTTAC+GGG | - | chr3_1:81179566-81179585 | None:intergenic | 50.0% | |
| !! | ACGACCTGACTAGTCTGAGA+TGG | - | chr3_1:81179637-81179656 | None:intergenic | 50.0% |
| ! | CTCCTTCTGTCCCTAGTCTT+TGG | + | chr3_1:81179893-81179912 | Msa0379790:intron | 50.0% |
| GACCAAAGACTAGGGACAGA+AGG | - | chr3_1:81179898-81179917 | None:intergenic | 50.0% | |
| ! | CAGATGGGCCTTGATTTTGC+TGG | + | chr3_1:81180726-81180745 | Msa0379790:intron | 50.0% |
| CAGAAGTGGTTAACTGCTGG+TGG | + | chr3_1:81180819-81180838 | Msa0379790:CDS | 50.0% | |
| GTGGTTAACTGCTGGTGGTT+TGG | + | chr3_1:81180824-81180843 | Msa0379790:CDS | 50.0% | |
| !! | TGAGGTTTCTGGCACAGTTG+AGG | + | chr3_1:81181192-81181211 | Msa0379790:CDS | 50.0% |
| !!! | TTTTCTAGCATGTGGGCTGG+TGG | + | chr3_1:81181391-81181410 | Msa0379790:intron | 50.0% |
| GCGGCTGCACAACATTAGAT+AGG | + | chr3_1:81182073-81182092 | Msa0379790:intron | 50.0% | |
| GCTGAGCTAAGTAGACTCCA+TGG | - | chr3_1:81182364-81182383 | None:intergenic | 50.0% | |
| AAGATACCAAACCGTGGTCG+TGG | - | chr3_1:81183026-81183045 | None:intergenic | 50.0% | |
| GAACTTTCATGCTCCCTTGC+AGG | + | chr3_1:81183123-81183142 | Msa0379790:intron | 50.0% | |
| ACTTTCATGCTCCCTTGCAG+GGG | + | chr3_1:81183125-81183144 | Msa0379790:intron | 50.0% | |
| TTGTCAGTCATCATCGAGCC+CGG | + | chr3_1:81183332-81183351 | Msa0379790:CDS | 50.0% | |
| ! | CCACGAGTTGAACGAGTTGA+CGG | - | chr3_1:81183520-81183539 | None:intergenic | 50.0% |
| TCGTTCAACTCGTGGCAATG+AGG | + | chr3_1:81183525-81183544 | Msa0379790:CDS | 50.0% | |
| !! | TGCCAAGGTTGATGAACCTG+TGG | + | chr3_1:81183555-81183574 | Msa0379790:CDS | 50.0% |
| TGCCACAGGTTCATCAACCT+TGG | - | chr3_1:81183560-81183579 | None:intergenic | 50.0% | |
| !!! | CTTTTGGAGTCTGATGCCAC+AGG | - | chr3_1:81183574-81183593 | None:intergenic | 50.0% |
| ACTGCAGGAGATGTGGGAAA+AGG | + | chr3_1:81183742-81183761 | Msa0379790:CDS | 50.0% | |
| !!! | TGTGCAGGGGTTTTAGGTAC+AGG | - | chr3_1:81183778-81183797 | None:intergenic | 50.0% |
| CTTCTTGGGGTTGCACTTGA+AGG | + | chr3_1:81183949-81183968 | Msa0379790:CDS | 50.0% | |
| TCTTGTGACTCAGCCGAGTT+AGG | - | chr3_1:81184018-81184037 | None:intergenic | 50.0% | |
| !! | GAGTTTGCTGTCCAACGGAA+TGG | + | chr3_1:81184036-81184055 | Msa0379790:CDS | 50.0% |
| CCTCATCCAAGTCAAGGGAG+GGG | - | chr3_1:81176687-81176706 | None:intergenic | 55.0% | |
| CTCCTCATCCAAGTCAAGGG+AGG | - | chr3_1:81176689-81176708 | None:intergenic | 55.0% | |
| !! | CTCCCTTGACTTGGATGAGG+AGG | + | chr3_1:81176687-81176706 | Msa0379790:five_prime_UTR | 55.0% |
| CCTCCTCCTCATCCAAGTCA+AGG | - | chr3_1:81176693-81176712 | None:intergenic | 55.0% | |
| !! | CCTTGACTTGGATGAGGAGG+AGG | + | chr3_1:81176690-81176709 | Msa0379790:five_prime_UTR | 55.0% |
| CATTTGACAGAATCCGGCGC+GGG | + | chr3_1:81177292-81177311 | Msa0379790:intron | 55.0% | |
| ! | AGATGGCGCATGCCTTGTTG+GGG | - | chr3_1:81177571-81177590 | None:intergenic | 55.0% |
| CTAGATGGCGCATGCCTTGT+TGG | - | chr3_1:81177573-81177592 | None:intergenic | 55.0% | |
| CAACAAGGCATGCGCCATCT+AGG | + | chr3_1:81177571-81177590 | Msa0379790:CDS | 55.0% | |
| ATGTCGCTCTGCCATCCTAC+CGG | + | chr3_1:81177608-81177627 | Msa0379790:CDS | 55.0% | |
| TGACACTAGACGACCTCTGG+TGG | - | chr3_1:81178058-81178077 | None:intergenic | 55.0% | |
| AATCAGATGGGGGTAGGAGG+GGG | - | chr3_1:81178108-81178127 | None:intergenic | 55.0% | |
| TGGGTGGAGATGTGATGTCC+TGG | - | chr3_1:81178424-81178443 | None:intergenic | 55.0% | |
| ! | ATGTGGCGTCGAGGTCTCTT+GGG | - | chr3_1:81178443-81178462 | None:intergenic | 55.0% |
| ! | TATGTGGCGTCGAGGTCTCT+TGG | - | chr3_1:81178444-81178463 | None:intergenic | 55.0% |
| ACCAAACGTGGGGAGTCTTG+GGG | - | chr3_1:81178741-81178760 | None:intergenic | 55.0% | |
| ! | GCGTACCCCCATCCAACTTT+TGG | + | chr3_1:81178881-81178900 | Msa0379790:intron | 55.0% |
| AGCCACTACTTCGTCTCAGC+AGG | + | chr3_1:81179289-81179308 | Msa0379790:CDS | 55.0% | |
| CTGGGGCAATGCTCATATGC+AGG | + | chr3_1:81179516-81179535 | Msa0379790:CDS | 55.0% | |
| !! | CCTGACTAGTCTGAGATGGC+AGG | - | chr3_1:81179633-81179652 | None:intergenic | 55.0% |
| ! | CCTGCCATCTCAGACTAGTC+AGG | + | chr3_1:81179630-81179649 | Msa0379790:CDS | 55.0% |
| ACAGTGGTGTACCTCTCGAC+CGG | - | chr3_1:81180871-81180890 | None:intergenic | 55.0% | |
| CTGATTCTCAGCCACGACCA+CGG | + | chr3_1:81183012-81183031 | Msa0379790:intron | 55.0% | |
| CCGTCAACTCGTTCAACTCG+TGG | + | chr3_1:81183517-81183536 | Msa0379790:CDS | 55.0% | |
| TGTCTGCCCTGCTAGACTCA+TGG | - | chr3_1:81183837-81183856 | None:intergenic | 55.0% | |
| GACTCAGCCGAGTTAGGAGA+TGG | - | chr3_1:81184012-81184031 | None:intergenic | 55.0% | |
| GCTGTCCAACGGAATGGGAA+TGG | + | chr3_1:81184042-81184061 | Msa0379790:CDS | 55.0% | |
| GAGGTCCATTCCCATTCCGT+TGG | - | chr3_1:81184050-81184069 | None:intergenic | 55.0% | |
| !! | CCCCTCCCTTGACTTGGATG+AGG | + | chr3_1:81176684-81176703 | Msa0379790:five_prime_UTR | 60.0% |
| TGTAATCGTCCAACCCGCGC+CGG | - | chr3_1:81177308-81177327 | None:intergenic | 60.0% | |
| GTGGAGTACACGCCCCAACA+AGG | + | chr3_1:81177556-81177575 | Msa0379790:CDS | 60.0% | |
| TGTCGCTCTGCCATCCTACC+GGG | + | chr3_1:81177609-81177628 | Msa0379790:CDS | 60.0% | |
| ATCAGATGGGGGTAGGAGGG+GGG | - | chr3_1:81178107-81178126 | None:intergenic | 60.0% | |
| ACCCCAAGACTCCCCACGTT+TGG | + | chr3_1:81178737-81178756 | Msa0379790:intron | 60.0% | |
| TCTCAGCCACGACCACGGTT+TGG | + | chr3_1:81183017-81183036 | Msa0379790:intron | 60.0% | |
| TCCGGATGGGAGTGGCTAAC+CGG | - | chr3_1:81183354-81183373 | None:intergenic | 60.0% | |
| CTGAACTGTCCGGATGGGAG+TGG | - | chr3_1:81183362-81183381 | None:intergenic | 60.0% | |
| TGACAGAATCCGGCGCGGGT+TGG | + | chr3_1:81177296-81177315 | Msa0379790:intron | 65.0% | |
| TCTGCCATCCTACCGGGTGG+TGG | + | chr3_1:81177615-81177634 | Msa0379790:CDS | 65.0% | |
| !! | CCATCCTACCGGGTGGTGGA+GGG | + | chr3_1:81177619-81177638 | Msa0379790:CDS | 65.0% |
| !! | TACCGGGTGGTGGAGGGAGT+GGG | + | chr3_1:81177625-81177644 | Msa0379790:CDS | 65.0% |
| ! | TGGCGTCGAGGTCTCTTGGG+TGG | - | chr3_1:81178440-81178459 | None:intergenic | 65.0% |
| GCTCACTCTTGCCGGTCGAG+AGG | + | chr3_1:81180857-81180876 | Msa0379790:CDS | 65.0% | |
| CCGGATGGGAGTGGCTAACC+GGG | - | chr3_1:81183353-81183372 | None:intergenic | 65.0% | |
| ! | CCCGGTTAGCCACTCCCATC+CGG | + | chr3_1:81183350-81183369 | Msa0379790:CDS | 65.0% |
| CGGGCGATTCACTGCTGCTC+TGG | - | chr3_1:81183446-81183465 | None:intergenic | 65.0% | |
| CGCTCTGCCATCCTACCGGG+TGG | + | chr3_1:81177612-81177631 | Msa0379790:CDS | 70.0% | |
| ! | GCCATCCTACCGGGTGGTGG+AGG | + | chr3_1:81177618-81177637 | Msa0379790:CDS | 70.0% |
| CCCTCCACCACCCGGTAGGA+TGG | - | chr3_1:81177622-81177641 | None:intergenic | 70.0% | |
| CACTCCCTCCACCACCCGGT+AGG | - | chr3_1:81177626-81177645 | None:intergenic | 70.0% | |
| !! | CTACCGGGTGGTGGAGGGAG+TGG | + | chr3_1:81177624-81177643 | Msa0379790:CDS | 70.0% |
| GTCCCACTCCCTCCACCACC+CGG | - | chr3_1:81177630-81177649 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 81176524 | 81184461 | 81176524 | ID=Msa0379790;Name=Msa0379790 |
| chr3_1 | mRNA | 81176524 | 81184461 | 81176524 | ID=Msa0379790-mRNA-1;Parent=Msa0379790;Name=Msa0379790-mRNA-1;_AED=0.14;_eAED=0.14;_QI=407|1|1|1|0.92|0.85|14|327|721 |
| chr3_1 | exon | 81176524 | 81176861 | 81176524 | ID=Msa0379790-mRNA-1:exon:20406;Parent=Msa0379790-mRNA-1 |
| chr3_1 | exon | 81177012 | 81177197 | 81177012 | ID=Msa0379790-mRNA-1:exon:20407;Parent=Msa0379790-mRNA-1 |
| chr3_1 | exon | 81177302 | 81177361 | 81177302 | ID=Msa0379790-mRNA-1:exon:20408;Parent=Msa0379790-mRNA-1 |
| chr3_1 | exon | 81177525 | 81177685 | 81177525 | ID=Msa0379790-mRNA-1:exon:20409;Parent=Msa0379790-mRNA-1 |
| chr3_1 | exon | 81179203 | 81179326 | 81179203 | ID=Msa0379790-mRNA-1:exon:20410;Parent=Msa0379790-mRNA-1 |
| chr3_1 | exon | 81179440 | 81179537 | 81179440 | ID=Msa0379790-mRNA-1:exon:20411;Parent=Msa0379790-mRNA-1 |
| chr3_1 | exon | 81179612 | 81179725 | 81179612 | ID=Msa0379790-mRNA-1:exon:20412;Parent=Msa0379790-mRNA-1 |
| chr3_1 | exon | 81180304 | 81180364 | 81180304 | ID=Msa0379790-mRNA-1:exon:20413;Parent=Msa0379790-mRNA-1 |
| chr3_1 | exon | 81180729 | 81180878 | 81180729 | ID=Msa0379790-mRNA-1:exon:20414;Parent=Msa0379790-mRNA-1 |
| chr3_1 | exon | 81181103 | 81181213 | 81181103 | ID=Msa0379790-mRNA-1:exon:20415;Parent=Msa0379790-mRNA-1 |
| chr3_1 | exon | 81181399 | 81181566 | 81181399 | ID=Msa0379790-mRNA-1:exon:20416;Parent=Msa0379790-mRNA-1 |
| chr3_1 | exon | 81181674 | 81181787 | 81181674 | ID=Msa0379790-mRNA-1:exon:20417;Parent=Msa0379790-mRNA-1 |
| chr3_1 | exon | 81182474 | 81182530 | 81182474 | ID=Msa0379790-mRNA-1:exon:20418;Parent=Msa0379790-mRNA-1 |
| chr3_1 | exon | 81183304 | 81184461 | 81183304 | ID=Msa0379790-mRNA-1:exon:20419;Parent=Msa0379790-mRNA-1 |
| chr3_1 | five_prime_UTR | 81176524 | 81176861 | 81176524 | ID=Msa0379790-mRNA-1:five_prime_utr;Parent=Msa0379790-mRNA-1 |
| chr3_1 | five_prime_UTR | 81177012 | 81177080 | 81177012 | ID=Msa0379790-mRNA-1:five_prime_utr;Parent=Msa0379790-mRNA-1 |
| chr3_1 | CDS | 81177081 | 81177197 | 81177081 | ID=Msa0379790-mRNA-1:cds;Parent=Msa0379790-mRNA-1 |
| chr3_1 | CDS | 81177302 | 81177361 | 81177302 | ID=Msa0379790-mRNA-1:cds;Parent=Msa0379790-mRNA-1 |
| chr3_1 | CDS | 81177525 | 81177685 | 81177525 | ID=Msa0379790-mRNA-1:cds;Parent=Msa0379790-mRNA-1 |
| chr3_1 | CDS | 81179203 | 81179326 | 81179203 | ID=Msa0379790-mRNA-1:cds;Parent=Msa0379790-mRNA-1 |
| chr3_1 | CDS | 81179440 | 81179537 | 81179440 | ID=Msa0379790-mRNA-1:cds;Parent=Msa0379790-mRNA-1 |
| chr3_1 | CDS | 81179612 | 81179725 | 81179612 | ID=Msa0379790-mRNA-1:cds;Parent=Msa0379790-mRNA-1 |
| chr3_1 | CDS | 81180304 | 81180364 | 81180304 | ID=Msa0379790-mRNA-1:cds;Parent=Msa0379790-mRNA-1 |
| chr3_1 | CDS | 81180729 | 81180878 | 81180729 | ID=Msa0379790-mRNA-1:cds;Parent=Msa0379790-mRNA-1 |
| chr3_1 | CDS | 81181103 | 81181213 | 81181103 | ID=Msa0379790-mRNA-1:cds;Parent=Msa0379790-mRNA-1 |
| chr3_1 | CDS | 81181399 | 81181566 | 81181399 | ID=Msa0379790-mRNA-1:cds;Parent=Msa0379790-mRNA-1 |
| chr3_1 | CDS | 81181674 | 81181787 | 81181674 | ID=Msa0379790-mRNA-1:cds;Parent=Msa0379790-mRNA-1 |
| chr3_1 | CDS | 81182474 | 81182530 | 81182474 | ID=Msa0379790-mRNA-1:cds;Parent=Msa0379790-mRNA-1 |
| chr3_1 | CDS | 81183304 | 81184134 | 81183304 | ID=Msa0379790-mRNA-1:cds;Parent=Msa0379790-mRNA-1 |
| chr3_1 | three_prime_UTR | 81184135 | 81184461 | 81184135 | ID=Msa0379790-mRNA-1:three_prime_utr;Parent=Msa0379790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
