Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417440 | sp|Q8L7W1|MSL3_ARATH | 55.639 | 665 | 271 | 11 | 38 | 693 | 26 | 675 | 0.0 | 731 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417440 | G7J535 | 98.197 | 721 | 8 | 1 | 1 | 721 | 1 | 716 | 0.0 | 1455 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0038290 | Msa1417440 | 0.811502 | 6.779956e-51 | -8.615850e-47 |
| Msa0054390 | Msa1417440 | -0.804799 | 1.815939e-49 | -8.615850e-47 |
| Msa0081020 | Msa1417440 | -0.836732 | 7.877482e-57 | -8.615850e-47 |
| Msa0102110 | Msa1417440 | -0.807532 | 4.827003e-50 | -8.615850e-47 |
| Msa1345610 | Msa1417440 | 0.977554 | 5.166886e-144 | -8.615850e-47 |
| Msa0829300 | Msa1417440 | -0.801971 | 7.001011e-49 | -8.615850e-47 |
| Msa0829330 | Msa1417440 | -0.802253 | 6.125454e-49 | -8.615850e-47 |
| Msa0132630 | Msa1417440 | 0.854280 | 1.367734e-61 | -8.615850e-47 |
| Msa0231200 | Msa1417440 | -0.833481 | 5.203179e-56 | -8.615850e-47 |
| Msa0379790 | Msa1417440 | 0.987900 | 5.860737e-172 | -8.615850e-47 |
| Msa0992510 | Msa1417440 | -0.800832 | 1.197772e-48 | -8.615850e-47 |
| Msa1021590 | Msa1417440 | -0.830491 | 2.849707e-55 | -8.615850e-47 |
| Msa1044680 | Msa1417440 | -0.849057 | 4.128765e-60 | -8.615850e-47 |
| Msa1070720 | Msa1417440 | -0.806676 | 7.327948e-50 | -8.615850e-47 |
| Msa1105640 | Msa1417440 | -0.845055 | 5.155501e-59 | -8.615850e-47 |
| Msa0269970 | Msa1417440 | -0.860783 | 1.623016e-63 | -8.615850e-47 |
| Msa0323270 | Msa1417440 | -0.829970 | 3.821592e-55 | -8.615850e-47 |
| Msa0349210 | Msa1417440 | -0.809408 | 1.920391e-50 | -8.615850e-47 |
| Msa1148960 | Msa1417440 | -0.862703 | 4.199917e-64 | -8.615850e-47 |
| Msa0881360 | Msa1417440 | -0.824579 | 7.477477e-54 | -8.615850e-47 |
| Msa0891590 | Msa1417440 | -0.807809 | 4.215267e-50 | -8.615850e-47 |
| Msa0903310 | Msa1417440 | -0.813929 | 1.995547e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417440 | MtrunA17_Chr3g0132931 | 98.197 | 721 | 8 | 1 | 1 | 721 | 1 | 716 | 0.0 | 1455 |
| Msa1417440 | MtrunA17_Chr5g0412241 | 54.219 | 723 | 280 | 13 | 12 | 705 | 1 | 701 | 0.0 | 753 |
| Msa1417440 | MtrunA17_Chr3g0132961 | 62.306 | 581 | 204 | 8 | 10 | 585 | 11 | 581 | 0.0 | 719 |
| Msa1417440 | MtrunA17_Chr3g0132941 | 37.799 | 209 | 78 | 9 | 323 | 521 | 133 | 299 | 3.41e-20 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417440 | AT1G58200.2 | 55.639 | 665 | 271 | 11 | 38 | 693 | 26 | 675 | 0.0 | 731 |
| Msa1417440 | AT1G58200.1 | 55.639 | 665 | 271 | 11 | 38 | 693 | 26 | 675 | 0.0 | 731 |
| Msa1417440 | AT5G10490.1 | 54.852 | 711 | 272 | 13 | 12 | 717 | 1 | 667 | 0.0 | 721 |
| Msa1417440 | AT5G10490.3 | 56.076 | 683 | 254 | 12 | 40 | 717 | 24 | 665 | 0.0 | 716 |
| Msa1417440 | AT5G10490.2 | 56.278 | 677 | 250 | 12 | 46 | 717 | 4 | 639 | 0.0 | 716 |
| Msa1417440 | AT4G00290.1 | 26.291 | 213 | 141 | 6 | 261 | 465 | 286 | 490 | 4.42e-12 | 69.7 |
Find 204 sgRNAs with CRISPR-Local
Find 520 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATTGCCTTTGCTGTTTA+TGG | 0.117984 | tig0024475:+47083 | Msa1417440:CDS |
| GTAATTAAAATTAAAATATT+TGG | 0.148257 | tig0024475:-44447 | None:intergenic |
| TCTGGAAGATATGATGATTT+TGG | 0.151263 | tig0024475:-44657 | None:intergenic |
| TGCAAAATTCTCATCACTTT+TGG | 0.160964 | tig0024475:-51398 | None:intergenic |
| ATTGAGGGGTATGAGGTTTC+TGG | 0.210367 | tig0024475:+49004 | Msa1417440:CDS |
| TTTGGTTGGAACTTCGAAAA+AGG | 0.224946 | tig0024475:-44429 | None:intergenic |
| TCTTCACCATTAACTTTATA+CGG | 0.230735 | tig0024475:-51295 | None:intergenic |
| GTCTGAGATGGCAGGATTAT+TGG | 0.231716 | tig0024475:-47444 | None:intergenic |
| TCCTTGGAGTTTACACTAGA+TGG | 0.266948 | tig0024475:-51436 | None:intergenic |
| AAGAAGAATATTCTCTTCTA+AGG | 0.269634 | tig0024475:-51743 | None:intergenic |
| GAATTGTATTTCAATACTTC+TGG | 0.271444 | tig0024475:-44675 | None:intergenic |
| ATCCACTCATTCAATATAAA+TGG | 0.277217 | tig0024475:-48971 | None:intergenic |
| CATCTCCTTTAGAGATGATT+TGG | 0.278927 | tig0024475:+52222 | Msa1417440:three_prime_UTR |
| GGAATCAATCGAAGCAAAAT+AGG | 0.284248 | tig0024475:-47050 | None:intergenic |
| GAACCACCGTATAAAGTTAA+TGG | 0.285284 | tig0024475:+51289 | Msa1417440:CDS |
| TTATGTGGCGCCTGGAAATA+TGG | 0.295307 | tig0024475:-44370 | None:intergenic |
| AAGATTGTAATCTGTAATAT+TGG | 0.297871 | tig0024475:+52199 | Msa1417440:three_prime_UTR |
| TTATTGCCTTTGCTGTTTAT+GGG | 0.298393 | tig0024475:+47084 | Msa1417440:CDS |
| TAGGTCATATGATTCTTTAT+TGG | 0.307183 | tig0024475:+47022 | Msa1417440:intron |
| CTAGATGGCGCATGCCTTGT+TGG | 0.308296 | tig0024475:-45376 | None:intergenic |
| AGCTGATATGCGCAAGGTTT+TGG | 0.309117 | tig0024475:+49505 | Msa1417440:CDS |
| TGCTGCTGTGTCATTATTCA+TGG | 0.310689 | tig0024475:+48599 | Msa1417440:CDS |
| TGGTTAACTGCTGGTGGTTT+GGG | 0.312167 | tig0024475:+48648 | Msa1417440:CDS |
| TTAGAAGAGAATATTCTTCT+TGG | 0.319652 | tig0024475:+51745 | Msa1417440:CDS |
| AACTATCAGAACCCATGTTC+TGG | 0.320526 | tig0024475:-51489 | None:intergenic |
| CTTCTTGGGGTTGCACTTGA+AGG | 0.322534 | tig0024475:+51760 | Msa1417440:CDS |
| TGCTCTGGATCGAGTGAAAA+TGG | 0.324671 | tig0024475:-51239 | None:intergenic |
| GAAACAGGAGGCAATCCTTT+TGG | 0.327663 | tig0024475:+51108 | Msa1417440:intron |
| TCCGGATGGGAGTGGCTAAC+CGG | 0.331872 | tig0024475:-51162 | None:intergenic |
| TAGATGGCGCATGCCTTGTT+GGG | 0.335717 | tig0024475:-45375 | None:intergenic |
| CAATGCCACGGTTTCTTAAC+GGG | 0.336345 | tig0024475:-44835 | None:intergenic |
| TAGAAGAGAATATTCTTCTT+GGG | 0.339763 | tig0024475:+51746 | Msa1417440:CDS |
| AGCAATATACACTGCTGTTT+GGG | 0.342027 | tig0024475:+48575 | Msa1417440:CDS |
| AAGCAATATACACTGCTGTT+TGG | 0.345518 | tig0024475:+48574 | Msa1417440:CDS |
| AGGTCATATGATTCTTTATT+GGG | 0.349745 | tig0024475:+47023 | Msa1417440:intron |
| AGGCTCAAAACTAGTAATAA+TGG | 0.353567 | tig0024475:+44959 | Msa1417440:CDS |
| CGGGCGATTCACTGCTGCTC+TGG | 0.357040 | tig0024475:-51254 | None:intergenic |
| CAGCCATTATTATTGTGGAC+TGG | 0.362516 | tig0024475:+47319 | Msa1417440:CDS |
| GGATTCATTTCTTCCTCAAT+TGG | 0.382478 | tig0024475:-51799 | None:intergenic |
| CCTCGGAAAATATACCCTTT+GGG | 0.382562 | tig0024475:+51212 | Msa1417440:CDS |
| ACGATCATCACCTCTAATAA+TGG | 0.384373 | tig0024475:-49244 | None:intergenic |
| GCCTCGGAAAATATACCCTT+TGG | 0.385437 | tig0024475:+51211 | Msa1417440:CDS |
| GCCCCAGTCCACAATAATAA+TGG | 0.387380 | tig0024475:-47322 | None:intergenic |
| CTACCGGGTGGTGGAGGGAG+TGG | 0.388142 | tig0024475:+45430 | Msa1417440:CDS |
| GCCATCCTACCGGGTGGTGG+AGG | 0.388405 | tig0024475:+45424 | Msa1417440:CDS |
| TCTTGTGACTCAGCCGAGTT+AGG | 0.388980 | tig0024475:-51826 | None:intergenic |
| ACAGTATTGCTCACTCTTGC+CGG | 0.390378 | tig0024475:+48672 | Msa1417440:CDS |
| GACTCATGGTTAGTAATAAC+AGG | 0.390821 | tig0024475:-51631 | None:intergenic |
| GTGGTTAACTGCTGGTGGTT+TGG | 0.396659 | tig0024475:+48647 | Msa1417440:CDS |
| TGAGGAGTACCTTTGTGTTA+AGG | 0.398606 | tig0024475:+50320 | Msa1417440:CDS |
| GAAGTATTGAAATACAATTC+AGG | 0.401253 | tig0024475:+44678 | Msa1417440:five_prime_UTR |
| ACATACATTTCTTGCATCAC+TGG | 0.405151 | tig0024475:-48171 | None:intergenic |
| TTTATGGGAGCCATATTTCC+AGG | 0.405318 | tig0024475:+44360 | None:intergenic |
| TTGACAGTGAACTTGTGATT+AGG | 0.406344 | tig0024475:-49282 | None:intergenic |
| TCAATGCCACGGTTTCTTAA+CGG | 0.408145 | tig0024475:-44836 | None:intergenic |
| AGCCATTATTATTGTGGACT+GGG | 0.408214 | tig0024475:+47320 | Msa1417440:CDS |
| TCCTTCTTATCTTTGTTAGC+AGG | 0.413944 | tig0024475:-51880 | None:intergenic |
| AAGGCAAAGAAGGTATGATT+TGG | 0.415225 | tig0024475:-44568 | None:intergenic |
| CTTTGACTTGGACTTATCCT+TGG | 0.417001 | tig0024475:-51452 | None:intergenic |
| CATTTGCTTACTGTTTATCA+AGG | 0.428109 | tig0024475:+47526 | Msa1417440:CDS |
| ATATAAATGGCCGAGTTGTA+TGG | 0.432347 | tig0024475:-48958 | None:intergenic |
| CCACGAGTTGAACGAGTTGA+CGG | 0.433490 | tig0024475:-51328 | None:intergenic |
| CAACAAGGCATGCGCCATCT+AGG | 0.438226 | tig0024475:+45377 | Msa1417440:CDS |
| AACAAAGATTGAGGGGTATG+AGG | 0.439911 | tig0024475:+48997 | Msa1417440:CDS |
| AGTTGAAAAGGTGAAGTGAT+TGG | 0.443938 | tig0024475:+44858 | Msa1417440:five_prime_UTR |
| GTTAGATTTATTCATTTATG+TGG | 0.444235 | tig0024475:-44385 | None:intergenic |
| GCTAAGCAAAATGACTAGAT+TGG | 0.445276 | tig0024475:+51928 | Msa1417440:exon |
| AGCCACTACTTCGTCTCAGC+AGG | 0.445866 | tig0024475:+47111 | Msa1417440:CDS |
| ACTATCAGAACCCATGTTCT+GGG | 0.446447 | tig0024475:-51488 | None:intergenic |
| ATGTCGCTCTGCCATCCTAC+CGG | 0.447780 | tig0024475:+45414 | Msa1417440:CDS |
| TCCTGAAAACACAGCTCTAA+AGG | 0.450592 | tig0024475:+49589 | Msa1417440:CDS |
| TTTACCCTTGGAGGAAGAAA+AGG | 0.453949 | tig0024475:-44587 | None:intergenic |
| AGATTCTCGGAGTAGGAAAC+AGG | 0.455437 | tig0024475:-52132 | None:intergenic |
| TTACTAACCATGAGTCTAGC+AGG | 0.459792 | tig0024475:+51638 | Msa1417440:CDS |
| TCATTATTCATGGAGTTGCT+AGG | 0.467872 | tig0024475:+48609 | Msa1417440:CDS |
| CTTCGATTGATTCCAGCCCT+TGG | 0.468132 | tig0024475:+47059 | Msa1417440:CDS |
| CGAGAAAATTGCATAGAACC+TGG | 0.470723 | tig0024475:-44929 | None:intergenic |
| GCATTTGGAAATGAAGAGGT+TGG | 0.471934 | tig0024475:-51907 | None:intergenic |
| CAACACTTATGTCAGATTCT+CGG | 0.473569 | tig0024475:-52145 | None:intergenic |
| TTCTGAAGAACTTCAACCTA+AGG | 0.473666 | tig0024475:-51991 | None:intergenic |
| AATTAACCCCTCCCTTGACT+TGG | 0.475269 | tig0024475:+44516 | Msa1417440:five_prime_UTR |
| TTGCTTTCCCAGCAAAATCA+AGG | 0.476830 | tig0024475:-48557 | None:intergenic |
| TGGTCACCAACCATTATTAG+AGG | 0.477341 | tig0024475:+49234 | Msa1417440:CDS |
| TTATTCATTTATGTGGCGCC+TGG | 0.479449 | tig0024475:-44378 | None:intergenic |
| CCCGGTTAGCCACTCCCATC+CGG | 0.482156 | tig0024475:+51161 | Msa1417440:CDS |
| GGCTTGGAAGAAATTAATAG+AGG | 0.485421 | tig0024475:-44636 | None:intergenic |
| GAGTTTGCTGTCCAACGGAA+TGG | 0.486188 | tig0024475:+51847 | Msa1417440:CDS |
| TCCTGCTAACAAAGATAAGA+AGG | 0.488760 | tig0024475:+51879 | Msa1417440:CDS |
| TTAAAATTAAAATATTTGGT+TGG | 0.490531 | tig0024475:-44443 | None:intergenic |
| TACATGATGCTGAAAACTAC+GGG | 0.491533 | tig0024475:-44984 | None:intergenic |
| ATCTGACTCAGAAATCTCAT+TGG | 0.494433 | tig0024475:+49316 | Msa1417440:CDS |
| TAACATTACGAATTTACCCT+TGG | 0.494931 | tig0024475:-44599 | None:intergenic |
| TATGGATCATTATACTTGAA+AGG | 0.495848 | tig0024475:-48940 | None:intergenic |
| AATTTCTGTTGCTCCACTTG+AGG | 0.495916 | tig0024475:-49536 | None:intergenic |
| CCTTGACTTGGATGAGGAGG+AGG | 0.496729 | tig0024475:+44528 | Msa1417440:five_prime_UTR |
| CCCTCCACCACCCGGTAGGA+TGG | 0.496972 | tig0024475:-45425 | None:intergenic |
| CATTACGAATTTACCCTTGG+AGG | 0.497056 | tig0024475:-44596 | None:intergenic |
| GAATCAATCGAAGCAAAATA+GGG | 0.497586 | tig0024475:-47049 | None:intergenic |
| ACCGTGGCATTGAGTTGAAA+AGG | 0.499151 | tig0024475:+44846 | Msa1417440:five_prime_UTR |
| CCGGATGGGAGTGGCTAACC+GGG | 0.500022 | tig0024475:-51161 | None:intergenic |
| TTCTTATCTTTGTTAGCAGG+AGG | 0.502177 | tig0024475:-51877 | None:intergenic |
| GTGGTTCTATTAGTAAGAAC+GGG | 0.504498 | tig0024475:-51273 | None:intergenic |
| AGTTTGCTGTCCAACGGAAT+GGG | 0.505163 | tig0024475:+51848 | Msa1417440:CDS |
| CCATCCTACCGGGTGGTGGA+GGG | 0.505615 | tig0024475:+45425 | Msa1417440:CDS |
| TCTGCCATCCTACCGGGTGG+TGG | 0.506157 | tig0024475:+45421 | Msa1417440:CDS |
| CCTGCCATCTCAGACTAGTC+AGG | 0.507836 | tig0024475:+47452 | Msa1417440:CDS |
| CAAGTCTTCAATTTCAACAA+TGG | 0.509177 | tig0024475:+44901 | Msa1417440:CDS |
| TACCGGGTGGTGGAGGGAGT+GGG | 0.509448 | tig0024475:+45431 | Msa1417440:CDS |
| TTGCTCCAAATCATCTCTAA+AGG | 0.510724 | tig0024475:-52227 | None:intergenic |
| TGAGGTTTCTGGCACAGTTG+AGG | 0.511851 | tig0024475:+49015 | Msa1417440:CDS |
| CAACTCTGAGAAGATCCAAA+AGG | 0.513442 | tig0024475:-51123 | None:intergenic |
| AAAAGAAACTGCAGAAGATG+TGG | 0.513721 | tig0024475:+51546 | Msa1417440:CDS |
| GCTGTCCAACGGAATGGGAA+TGG | 0.514341 | tig0024475:+51853 | Msa1417440:CDS |
| GGCCATTTATATTGAATGAG+TGG | 0.514735 | tig0024475:+48969 | Msa1417440:CDS |
| CTGAACTGTCCGGATGGGAG+TGG | 0.519563 | tig0024475:-51170 | None:intergenic |
| TTGAGCATCAGACTTTGACT+TGG | 0.526242 | tig0024475:-51464 | None:intergenic |
| TTACATTTCTATCAGTCACT+TGG | 0.527731 | tig0024475:+49350 | Msa1417440:CDS |
| TTCAGAGGACTGACAGCAGT+TGG | 0.529245 | tig0024475:+47257 | Msa1417440:intron |
| GCAAGATGAAGAGAAATCTT+CGG | 0.529586 | tig0024475:+51696 | Msa1417440:CDS |
| TCCTCATCCAAGTCAAGGGA+GGG | 0.531184 | tig0024475:-44523 | None:intergenic |
| CTGGGGCAATGCTCATATGC+AGG | 0.532365 | tig0024475:+47338 | Msa1417440:CDS |
| TGGATTCAAACAAAGATTGA+GGG | 0.532585 | tig0024475:+48989 | Msa1417440:CDS |
| TCAGAAACTACACTATGTGC+AGG | 0.532696 | tig0024475:-51601 | None:intergenic |
| GTGGATTCAAACAAAGATTG+AGG | 0.532984 | tig0024475:+48988 | Msa1417440:CDS |
| TGATGCTCAAACCCAGAACA+TGG | 0.533483 | tig0024475:+51477 | Msa1417440:CDS |
| CTCGGAAAATATACCCTTTG+GGG | 0.533597 | tig0024475:+51213 | Msa1417440:CDS |
| CCCCTCCCTTGACTTGGATG+AGG | 0.534496 | tig0024475:+44522 | Msa1417440:five_prime_UTR |
| TGTCGCTCTGCCATCCTACC+GGG | 0.537547 | tig0024475:+45415 | Msa1417440:CDS |
| CATTTGACAGAATCCGGCGC+GGG | 0.537802 | tig0024475:+45098 | Msa1417440:intron |
| GAGGTCCATTCCCATTCCGT+TGG | 0.538198 | tig0024475:-51858 | None:intergenic |
| GGAGGAAGAAAAGGCAAAGA+AGG | 0.538831 | tig0024475:-44578 | None:intergenic |
| AGCAACAGAAATTGCACAGA+AGG | 0.539152 | tig0024475:+49546 | Msa1417440:CDS |
| CGTGTACTCCACGTAAAAGA+TGG | 0.539288 | tig0024475:-45351 | None:intergenic |
| CTTAGCATTTGGAAATGAAG+AGG | 0.540708 | tig0024475:-51911 | None:intergenic |
| CTCCCTTGACTTGGATGAGG+AGG | 0.544294 | tig0024475:+44525 | Msa1417440:five_prime_UTR |
| GACTCAGCCGAGTTAGGAGA+TGG | 0.546014 | tig0024475:-51820 | None:intergenic |
| CCTCCTCCTCATCCAAGTCA+AGG | 0.547498 | tig0024475:-44528 | None:intergenic |
| GTCCCACTCCCTCCACCACC+CGG | 0.553788 | tig0024475:-45433 | None:intergenic |
| TTTAAATTATAATAAAGAGA+AGG | 0.555224 | tig0024475:+52169 | Msa1417440:three_prime_UTR |
| TGACAGAATCCGGCGCGGGT+TGG | 0.555558 | tig0024475:+45102 | Msa1417440:intron |
| ACTGCAGAAGATGTGGGAAA+AGG | 0.555701 | tig0024475:+51553 | Msa1417440:CDS |
| TTGTCAGTCATCATCGAGCC+CGG | 0.555870 | tig0024475:+51143 | Msa1417440:CDS |
| AGAAGAGAATATTCTTCTTG+GGG | 0.555945 | tig0024475:+51747 | Msa1417440:CDS |
| TGTCTGCCCTGCTAGACTCA+TGG | 0.556999 | tig0024475:-51645 | None:intergenic |
| AAGGCAATAATACCAAGGGC+TGG | 0.559924 | tig0024475:-47071 | None:intergenic |
| GTGAAAATGGAATCCCCAAA+GGG | 0.563083 | tig0024475:-51226 | None:intergenic |
| CTCCTCATCCAAGTCAAGGG+AGG | 0.563830 | tig0024475:-44524 | None:intergenic |
| TGTAATCGTCCAACCCGCGC+CGG | 0.565322 | tig0024475:-45111 | None:intergenic |
| AGAATATTCTCTTCTAAGGG+AGG | 0.566683 | tig0024475:-51739 | None:intergenic |
| TGCCACAGGTTCATCAACCT+TGG | 0.570082 | tig0024475:-51368 | None:intergenic |
| ATACATGATGCTGAAAACTA+CGG | 0.570217 | tig0024475:-44985 | None:intergenic |
| AGAAGAATATTCTCTTCTAA+GGG | 0.571417 | tig0024475:-51742 | None:intergenic |
| GGAGGTTTAACTGCTGATGA+TGG | 0.571460 | tig0024475:-51721 | None:intergenic |
| CACAAGAGTTTGCTGTCCAA+CGG | 0.571868 | tig0024475:+51842 | Msa1417440:CDS |
| CAGAAACTACACTATGTGCA+GGG | 0.572356 | tig0024475:-51600 | None:intergenic |
| AATATACAGTGAGCCTGCCT+CGG | 0.575648 | tig0024475:+51195 | Msa1417440:CDS |
| ACACAGAAGTGGTTAACTGC+TGG | 0.580779 | tig0024475:+48639 | Msa1417440:CDS |
| GCTAACAAAGATAAGAAGGA+TGG | 0.580826 | tig0024475:+51883 | Msa1417440:CDS |
| GGTGGTTCTATTAGTAAGAA+CGG | 0.584350 | tig0024475:-51274 | None:intergenic |
| ATTTCAACAATGGCGTACCC+AGG | 0.586378 | tig0024475:+44911 | Msa1417440:CDS |
| TTATGTCAGATTCTCGGAGT+AGG | 0.588541 | tig0024475:-52139 | None:intergenic |
| CTCCTCCTCATCCAAGTCAA+GGG | 0.588745 | tig0024475:-44527 | None:intergenic |
| ACAGTGGTGTACCTCTCGAC+CGG | 0.589587 | tig0024475:-48691 | None:intergenic |
| AGATGGCGCATGCCTTGTTG+GGG | 0.590773 | tig0024475:-45374 | None:intergenic |
| TCCATCTAGTGTAAACTCCA+AGG | 0.591305 | tig0024475:+51435 | Msa1417440:CDS |
| AGTGCGCGGTAAAAGATTCG+TGG | 0.592576 | tig0024475:-45142 | None:intergenic |
| CCGTCAACTCGTTCAACTCG+TGG | 0.592850 | tig0024475:+51328 | Msa1417440:CDS |
| CCTGACTAGTCTGAGATGGC+AGG | 0.593866 | tig0024475:-47452 | None:intergenic |
| GCCATTATTATTGTGGACTG+GGG | 0.594152 | tig0024475:+47321 | Msa1417440:CDS |
| TCATCACCTCTAATAATGGT+TGG | 0.596112 | tig0024475:-49240 | None:intergenic |
| CCTCATCCAAGTCAAGGGAG+GGG | 0.598433 | tig0024475:-44522 | None:intergenic |
| CTCAATCCCATAAACAGCAA+AGG | 0.602491 | tig0024475:-47090 | None:intergenic |
| GCTCACTCTTGCCGGTCGAG+AGG | 0.602784 | tig0024475:+48680 | Msa1417440:CDS |
| AATGAATCCATCTCCTAACT+CGG | 0.604421 | tig0024475:+51813 | Msa1417440:CDS |
| CACTCCCTCCACCACCCGGT+AGG | 0.604652 | tig0024475:-45429 | None:intergenic |
| TAGGTTTCTCCACACAGAAG+TGG | 0.609034 | tig0024475:+48628 | Msa1417440:CDS |
| TATTGTAGCTGATATGCGCA+AGG | 0.609834 | tig0024475:+49499 | Msa1417440:CDS |
| CAGAAGTGGTTAACTGCTGG+TGG | 0.614907 | tig0024475:+48642 | Msa1417440:CDS |
| AAAGAAACTGCAGAAGATGT+GGG | 0.619466 | tig0024475:+51547 | Msa1417440:CDS |
| ACGACCTGACTAGTCTGAGA+TGG | 0.620289 | tig0024475:-47456 | None:intergenic |
| CGCTCTGCCATCCTACCGGG+TGG | 0.624226 | tig0024475:+45418 | Msa1417440:CDS |
| ATCCTGCTGAGACGAAGTAG+TGG | 0.624352 | tig0024475:-47113 | None:intergenic |
| AGCAAAGGCAATAATACCAA+GGG | 0.628101 | tig0024475:-47075 | None:intergenic |
| TCGTTCAACTCGTGGCAATG+AGG | 0.629437 | tig0024475:+51336 | Msa1417440:CDS |
| CATGGGTTCTGATAGTTCAG+TGG | 0.631810 | tig0024475:+51495 | Msa1417440:CDS |
| TACTAACCATGAGTCTAGCA+GGG | 0.636326 | tig0024475:+51639 | Msa1417440:CDS |
| GCAACAGAAATTGCACAGAA+GGG | 0.640894 | tig0024475:+49547 | Msa1417440:CDS |
| CAGCAAAGGCAATAATACCA+AGG | 0.642606 | tig0024475:-47076 | None:intergenic |
| AGTGAAAATGGAATCCCCAA+AGG | 0.643663 | tig0024475:-51227 | None:intergenic |
| GTGGAGTACACGCCCCAACA+AGG | 0.646133 | tig0024475:+45362 | Msa1417440:CDS |
| GAGAAAATTGCATAGAACCT+GGG | 0.649314 | tig0024475:-44928 | None:intergenic |
| AATGCCACGGTTTCTTAACG+GGG | 0.654023 | tig0024475:-44834 | None:intergenic |
| GATGCTCAAACCCAGAACAT+GGG | 0.655040 | tig0024475:+51478 | Msa1417440:CDS |
| TATTAGAGGTGATGATCGTG+AGG | 0.660808 | tig0024475:+49248 | Msa1417440:CDS |
| TCACCATTAACTTTATACGG+TGG | 0.661817 | tig0024475:-51292 | None:intergenic |
| AGAAACTACACTATGTGCAG+GGG | 0.663314 | tig0024475:-51599 | None:intergenic |
| AGTACTTTACCTTAACACAA+AGG | 0.665075 | tig0024475:-50329 | None:intergenic |
| GGATTCAAACAAAGATTGAG+GGG | 0.668904 | tig0024475:+48990 | Msa1417440:CDS |
| GTAACCCCGTTAAGAAACCG+TGG | 0.671052 | tig0024475:+44830 | Msa1417440:five_prime_UTR |
| GTATAATGATCCATACAACT+CGG | 0.679127 | tig0024475:+48948 | Msa1417440:CDS |
| AGCAGTTAACCACTTCTGTG+TGG | 0.686421 | tig0024475:-48637 | None:intergenic |
| TGCCAAGGTTGATGAACCTG+TGG | 0.690105 | tig0024475:+51366 | Msa1417440:CDS |
| TCATTTGACAGAATCCGGCG+CGG | 0.715427 | tig0024475:+45097 | Msa1417440:intron |
| ACATGATGCTGAAAACTACG+GGG | 0.789598 | tig0024475:-44983 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTATATTTTATAAA+TGG | + | tig0024475:47587-47606 | Msa1417440:intron | 0.0% |
| !! | TTAAAATTAAAATATTTGGT+TGG | - | tig0024475:44446-44465 | None:intergenic | 10.0% |
| !!! | TTATTTTTAGATATTTATGT+AGG | + | tig0024475:47003-47022 | Msa1417440:intron | 10.0% |
| !! | AAGAAATAAAGAAATAAAAA+AGG | - | tig0024475:47171-47190 | None:intergenic | 10.0% |
| !! | GAAATGAAAAAAAATAAAAA+AGG | - | tig0024475:47199-47218 | None:intergenic | 10.0% |
| !!! | GTTTAAATTTTAATGTTATA+TGG | + | tig0024475:48086-48105 | Msa1417440:intron | 10.0% |
| !!! | AAATAAGTTTAATGTTTTAA+TGG | + | tig0024475:49861-49880 | Msa1417440:intron | 10.0% |
| !!! | AATAAGTTTAATGTTTTAAT+GGG | + | tig0024475:49862-49881 | Msa1417440:intron | 10.0% |
| !!! | ATTATTAGAAAAAAAAGTTT+TGG | + | tig0024475:49922-49941 | Msa1417440:intron | 10.0% |
| !! | TTTAAATTATAATAAAGAGA+AGG | + | tig0024475:52169-52188 | Msa1417440:three_prime_UTR | 10.0% |
| !! | CATATAGAAAATATTATCAA+TGG | - | tig0024475:45702-45721 | None:intergenic | 15.0% |
| !! | AAATATTTATTATAGTGTTG+TGG | + | tig0024475:46162-46181 | Msa1417440:intron | 15.0% |
| !!! | TATTTCAATGATATTTTCTT+TGG | + | tig0024475:46582-46601 | Msa1417440:intron | 15.0% |
| !! | ATAAAGAAATAAAAAAGGTT+GGG | - | tig0024475:47166-47185 | None:intergenic | 15.0% |
| !! | AATAAAGAAATAAAAAAGGT+TGG | - | tig0024475:47167-47186 | None:intergenic | 15.0% |
| !!! | TAAATGAAATCTTACTTTTA+GGG | - | tig0024475:47805-47824 | None:intergenic | 15.0% |
| !!! | ATAAATGAAATCTTACTTTT+AGG | - | tig0024475:47806-47825 | None:intergenic | 15.0% |
| !!! | TTTTAGTATTAAATGTGTAT+TGG | + | tig0024475:48052-48071 | Msa1417440:intron | 15.0% |
| !! | TTTAGTATTAAATGTGTATT+GGG | + | tig0024475:48053-48072 | Msa1417440:intron | 15.0% |
| !! | ATTAAAATTTAAACGTAATC+AGG | - | tig0024475:48080-48099 | None:intergenic | 15.0% |
| !!! | ACTTTTTCTTACAAAATTTA+TGG | - | tig0024475:48789-48808 | None:intergenic | 15.0% |
| !! | AAAGTTCATTTAATTGATAA+TGG | - | tig0024475:48834-48853 | None:intergenic | 15.0% |
| !! | ATATGTAAAAGTTCATTTAA+AGG | - | tig0024475:49051-49070 | None:intergenic | 15.0% |
| !!! | TAAATGAACTTTTACATATA+AGG | + | tig0024475:49052-49071 | Msa1417440:intron | 15.0% |
| !!! | TGTTTTTTTACATTTGTAAA+AGG | - | tig0024475:50862-50881 | None:intergenic | 15.0% |
| !! | GTTAGATTTATTCATTTATG+TGG | - | tig0024475:44388-44407 | None:intergenic | 20.0% |
| !!! | ATGCATTTTTTATGCTAATT+AGG | + | tig0024475:45197-45216 | Msa1417440:intron | 20.0% |
| !! | ATGTAATATTATGAGAAAGA+CGG | - | tig0024475:45660-45679 | None:intergenic | 20.0% |
| !! | ATAAAAGTCAAAGAAACATA+TGG | - | tig0024475:45995-46014 | None:intergenic | 20.0% |
| !!! | AGACATACAAAAACTTTTAA+TGG | - | tig0024475:46082-46101 | None:intergenic | 20.0% |
| !! | AATAAATAGATACCAAAAGT+TGG | - | tig0024475:46718-46737 | None:intergenic | 20.0% |
| !!! | AACTTTTGGTATCTATTTAT+TGG | + | tig0024475:46717-46736 | Msa1417440:intron | 20.0% |
| !! | TAGATTATGCATTGAATAAT+AGG | - | tig0024475:46975-46994 | None:intergenic | 20.0% |
| !! | TAATTAATCTAGACAAGTAA+TGG | + | tig0024475:47770-47789 | Msa1417440:intron | 20.0% |
| !! | AATTAATCTAGACAAGTAAT+GGG | + | tig0024475:47771-47790 | Msa1417440:intron | 20.0% |
| !! | ATAAATAGGTTAACGATATT+GGG | - | tig0024475:48501-48520 | None:intergenic | 20.0% |
| !! | ATCAATTAAATGAACTTTGT+TGG | + | tig0024475:48836-48855 | Msa1417440:intron | 20.0% |
| !!! | TCATATTTTAATGTGAAAAC+TGG | + | tig0024475:49444-49463 | Msa1417440:intron | 20.0% |
| !!! | TTTTATTACTATGTTAACTG+TGG | - | tig0024475:49800-49819 | None:intergenic | 20.0% |
| !!! | ATTAGAAAAAAAAGTTTTGG+TGG | + | tig0024475:49925-49944 | Msa1417440:intron | 20.0% |
| !!! | ACTGATAATTAATAATTTGC+CGG | - | tig0024475:50455-50474 | None:intergenic | 20.0% |
| !!! | ATGCTTATTTTGTGAATATT+CGG | + | tig0024475:50579-50598 | Msa1417440:intron | 20.0% |
| !! | CAAATAAGAATCACTATAAT+AGG | + | tig0024475:50697-50716 | Msa1417440:intron | 20.0% |
| !! | ACTACTGTATTATTATATGT+AGG | - | tig0024475:50778-50797 | None:intergenic | 20.0% |
| !!! | TTTTTCCTACTAAATATAAG+TGG | + | tig0024475:51059-51078 | Msa1417440:intron | 20.0% |
| !! | AAATATAAGTGGTCTAATTA+AGG | + | tig0024475:51070-51089 | Msa1417440:intron | 20.0% |
| !! | AAGATTGTAATCTGTAATAT+TGG | + | tig0024475:52199-52218 | Msa1417440:three_prime_UTR | 20.0% |
| ! | GAATTGTATTTCAATACTTC+TGG | - | tig0024475:44678-44697 | None:intergenic | 25.0% |
| !!! | GAAGTATTGAAATACAATTC+AGG | + | tig0024475:44678-44697 | Msa1417440:five_prime_UTR | 25.0% |
| ! | TAACAGAAAAATGAGATCTA+AGG | - | tig0024475:44706-44725 | None:intergenic | 25.0% |
| !! | AAACAAAACCCTAAAAGTTT+TGG | - | tig0024475:44766-44785 | None:intergenic | 25.0% |
| ! | CAAGAGAAAGGAAAAAAAAA+AGG | - | tig0024475:44795-44814 | None:intergenic | 25.0% |
| ! | AAGTATACAGAACAAAAAAG+TGG | - | tig0024475:45037-45056 | None:intergenic | 25.0% |
| !! | CTCATTGAAAAACACTATTT+TGG | + | tig0024475:45299-45318 | Msa1417440:intron | 25.0% |
| ! | TAAACATACACACTAAATTG+TGG | - | tig0024475:45534-45553 | None:intergenic | 25.0% |
| ! | TATATCAAAGAAAATCTCAC+TGG | - | tig0024475:45811-45830 | None:intergenic | 25.0% |
| ! | GATATATTTCTCAATTCAGT+TGG | + | tig0024475:45825-45844 | Msa1417440:intron | 25.0% |
| ! | ATTTATGCCAAAAATCAGAT+GGG | - | tig0024475:45926-45945 | None:intergenic | 25.0% |
| ! | AATTTATGCCAAAAATCAGA+TGG | - | tig0024475:45927-45946 | None:intergenic | 25.0% |
| !! | AAAACTTTTAATGGCATAAG+CGG | - | tig0024475:46073-46092 | None:intergenic | 25.0% |
| ! | TGAGTAAATTTAAATCGAGA+AGG | - | tig0024475:46616-46635 | None:intergenic | 25.0% |
| ! | CATTGAATAATAGGTTACAA+AGG | - | tig0024475:46966-46985 | None:intergenic | 25.0% |
| ! | TAGGTCATATGATTCTTTAT+TGG | + | tig0024475:47022-47041 | Msa1417440:intron | 25.0% |
| ! | AGGTCATATGATTCTTTATT+GGG | + | tig0024475:47023-47042 | Msa1417440:intron | 25.0% |
| !! | AAAGTATCACAAATCAGAAA+AGG | - | tig0024475:47237-47256 | None:intergenic | 25.0% |
| !! | ATTTTCAGCCATTATTATTG+TGG | + | tig0024475:47314-47333 | Msa1417440:CDS | 25.0% |
| !!! | ATCTTACTTTTAGGGTAAAA+AGG | - | tig0024475:47797-47816 | None:intergenic | 25.0% |
| !! | TTTCATTTATTGCTTGCTTT+TGG | + | tig0024475:47816-47835 | Msa1417440:intron | 25.0% |
| ! | TAGGATTATACTAGACATTT+AGG | + | tig0024475:48374-48393 | Msa1417440:intron | 25.0% |
| ! | TCTGTTTGAATCTTTCTATT+AGG | + | tig0024475:48472-48491 | Msa1417440:intron | 25.0% |
| ! | CTGTTTGAATCTTTCTATTA+GGG | + | tig0024475:48473-48492 | Msa1417440:intron | 25.0% |
| ! | TAAATAGGTTAACGATATTG+GGG | - | tig0024475:48500-48519 | None:intergenic | 25.0% |
| ! | CATAAATAGGTTAACGATAT+TGG | - | tig0024475:48502-48521 | None:intergenic | 25.0% |
| ! | CAATATCGTTAACCTATTTA+TGG | + | tig0024475:48500-48519 | Msa1417440:intron | 25.0% |
| ! | TTAAATGAGATGCCATAAAT+AGG | - | tig0024475:48515-48534 | None:intergenic | 25.0% |
| ! | AAGAAAAAATGATTGACAGA+TGG | + | tig0024475:48533-48552 | Msa1417440:intron | 25.0% |
| ! | AGAAAAAATGATTGACAGAT+GGG | + | tig0024475:48534-48553 | Msa1417440:intron | 25.0% |
| ! | TTTGTAAGAAAAAGTCTTCT+AGG | + | tig0024475:48794-48813 | Msa1417440:intron | 25.0% |
| !!! | ATTTAATTGATAATGGCTAC+TGG | - | tig0024475:48827-48846 | None:intergenic | 25.0% |
| ! | TATGGATCATTATACTTGAA+AGG | - | tig0024475:48943-48962 | None:intergenic | 25.0% |
| ! | ATCCACTCATTCAATATAAA+TGG | - | tig0024475:48974-48993 | None:intergenic | 25.0% |
| ! | TCTATATGTCAAATGATTGT+GGG | - | tig0024475:49126-49145 | None:intergenic | 25.0% |
| ! | TTCTATATGTCAAATGATTG+TGG | - | tig0024475:49127-49146 | None:intergenic | 25.0% |
| ! | AATATTCTGCATGAAGAAAA+TGG | - | tig0024475:49483-49502 | None:intergenic | 25.0% |
| !! | CTAAATCTGCTTGAATTTTA+CGG | - | tig0024475:49706-49725 | None:intergenic | 25.0% |
| !!! | AAGTTTAATGTTTTAATGGG+CGG | + | tig0024475:49865-49884 | Msa1417440:intron | 25.0% |
| ! | ACATTAGATAGGATTAGAAA+TGG | + | tig0024475:49895-49914 | Msa1417440:intron | 25.0% |
| ! | TAATCTCTCTTTATGTGATT+TGG | + | tig0024475:49972-49991 | Msa1417440:intron | 25.0% |
| ! | CAATAAAGATATTTCCTACT+AGG | - | tig0024475:50197-50216 | None:intergenic | 25.0% |
| !!! | TTTTTGGGATTTTGTGAAAT+TGG | + | tig0024475:50543-50562 | Msa1417440:intron | 25.0% |
| ! | ATAAGTAACTCAATATTCAC+AGG | - | tig0024475:50606-50625 | None:intergenic | 25.0% |
| ! | AATCAAAATGCATATGATGT+TGG | + | tig0024475:50640-50659 | Msa1417440:intron | 25.0% |
| ! | ATTTGTTTCCTTCTTAGATT+AGG | - | tig0024475:50682-50701 | None:intergenic | 25.0% |
| ! | ATAAGAATCACTATAATAGG+AGG | + | tig0024475:50700-50719 | Msa1417440:intron | 25.0% |
| ! | TAAGAATCACTATAATAGGA+GGG | + | tig0024475:50701-50720 | Msa1417440:intron | 25.0% |
| ! | AGTCATAAATTTAGCGTTAT+TGG | + | tig0024475:50986-51005 | Msa1417440:intron | 25.0% |
| ! | GTCATAAATTTAGCGTTATT+GGG | + | tig0024475:50987-51006 | Msa1417440:intron | 25.0% |
| ! | TTAGACCACTTATATTTAGT+AGG | - | tig0024475:51067-51086 | None:intergenic | 25.0% |
| ! | TTATTCTCGTTTAATGAAAC+AGG | + | tig0024475:51093-51112 | Msa1417440:intron | 25.0% |
| ! | TCTTCACCATTAACTTTATA+CGG | - | tig0024475:51298-51317 | None:intergenic | 25.0% |
| !!! | TTTTTTAGGTTGCATTGTTT+TGG | - | tig0024475:51530-51549 | None:intergenic | 25.0% |
| ! | AGAAGAATATTCTCTTCTAA+GGG | - | tig0024475:51745-51764 | None:intergenic | 25.0% |
| ! | AAGAAGAATATTCTCTTCTA+AGG | - | tig0024475:51746-51765 | None:intergenic | 25.0% |
| ! | TTAGAAGAGAATATTCTTCT+TGG | + | tig0024475:51745-51764 | Msa1417440:CDS | 25.0% |
| ! | TAGAAGAGAATATTCTTCTT+GGG | + | tig0024475:51746-51765 | Msa1417440:CDS | 25.0% |
| TAACATTACGAATTTACCCT+TGG | - | tig0024475:44602-44621 | None:intergenic | 30.0% | |
| !!! | AAGATATGATGATTTTGGCT+TGG | - | tig0024475:44655-44674 | None:intergenic | 30.0% |
| ! | TCTGGAAGATATGATGATTT+TGG | - | tig0024475:44660-44679 | None:intergenic | 30.0% |
| ! | TTACTTCGCCAAAACTTTTA+GGG | + | tig0024475:44755-44774 | Msa1417440:intron | 30.0% |
| !!! | TTTTTTTTCCTTTCTCTTGC+AGG | + | tig0024475:44796-44815 | Msa1417440:intron | 30.0% |
| AATTATAACCTGCAAGAGAA+AGG | - | tig0024475:44807-44826 | None:intergenic | 30.0% | |
| CAAGTCTTCAATTTCAACAA+TGG | + | tig0024475:44901-44920 | Msa1417440:CDS | 30.0% | |
| AGGCTCAAAACTAGTAATAA+TGG | + | tig0024475:44959-44978 | Msa1417440:CDS | 30.0% | |
| ATACATGATGCTGAAAACTA+CGG | - | tig0024475:44988-45007 | None:intergenic | 30.0% | |
| TAAATTCAGAACGTTGAGTT+TGG | + | tig0024475:45066-45085 | Msa1417440:intron | 30.0% | |
| !! | AATTAGGTTTGAAAGCGTTT+AGG | + | tig0024475:45213-45232 | Msa1417440:intron | 30.0% |
| !! | TTTGAAAGCGTTTAGGTTAT+TGG | + | tig0024475:45220-45239 | Msa1417440:intron | 30.0% |
| GTAAAGTAACAGTTAGGTAT+AGG | - | tig0024475:45264-45283 | None:intergenic | 30.0% | |
| ! | TAGTGTTCTTTTAACAAGGT+CGG | + | tig0024475:45474-45493 | Msa1417440:intron | 30.0% |
| AATTAACAGGAAAAAGTGAG+AGG | - | tig0024475:45500-45519 | None:intergenic | 30.0% | |
| !!! | CTCACTTTTTCCTGTTAATT+CGG | + | tig0024475:45500-45519 | Msa1417440:intron | 30.0% |
| ACTATGAAATTGTGTTTGCT+AGG | + | tig0024475:45594-45613 | Msa1417440:intron | 30.0% | |
| TTTATGCCAAAAATCAGATG+GGG | - | tig0024475:45925-45944 | None:intergenic | 30.0% | |
| !!! | GTAGCTTGTTGCATATATTT+TGG | + | tig0024475:45949-45968 | Msa1417440:intron | 30.0% |
| GTAATTTAAGTGTGAGTTGT+TGG | + | tig0024475:46308-46327 | Msa1417440:intron | 30.0% | |
| AAGATGTGGTTTAATGATTC+TGG | + | tig0024475:46503-46522 | Msa1417440:intron | 30.0% | |
| ATCATTGAAATACCAAACGT+GGG | - | tig0024475:46574-46593 | None:intergenic | 30.0% | |
| TATCATTGAAATACCAAACG+TGG | - | tig0024475:46575-46594 | None:intergenic | 30.0% | |
| ! | CAATGATATTTTCTTTGGCA+TGG | + | tig0024475:46587-46606 | Msa1417440:intron | 30.0% |
| ATAGATACCAAAAGTTGGAT+GGG | - | tig0024475:46713-46732 | None:intergenic | 30.0% | |
| AATAGATACCAAAAGTTGGA+TGG | - | tig0024475:46714-46733 | None:intergenic | 30.0% | |
| TTTGGTATCTATTTATTGGC+AGG | + | tig0024475:46721-46740 | Msa1417440:intron | 30.0% | |
| AGAAAAAGGAAACAAATGCA+TGG | - | tig0024475:46775-46794 | None:intergenic | 30.0% | |
| ! | ATTTGTTTCCTTTTTCTCTG+AGG | + | tig0024475:46778-46797 | Msa1417440:intron | 30.0% |
| GCTGTTTAACATAATCTTAG+TGG | - | tig0024475:46832-46851 | None:intergenic | 30.0% | |
| GAATCAATCGAAGCAAAATA+GGG | - | tig0024475:47052-47071 | None:intergenic | 30.0% | |
| !! | ATTATTGCCTTTGCTGTTTA+TGG | + | tig0024475:47083-47102 | Msa1417440:CDS | 30.0% |
| !! | TTATTGCCTTTGCTGTTTAT+GGG | + | tig0024475:47084-47103 | Msa1417440:CDS | 30.0% |
| AATAAAAAAGGTTGGGAAGT+TGG | - | tig0024475:47159-47178 | None:intergenic | 30.0% | |
| !!! | GATTTGTGATACTTTTTCAG+AGG | + | tig0024475:47242-47261 | Msa1417440:intron | 30.0% |
| ATCGTAGCATTATTTGTTTC+AGG | + | tig0024475:47412-47431 | Msa1417440:intron | 30.0% | |
| TCGTAGCATTATTTGTTTCA+GGG | + | tig0024475:47413-47432 | Msa1417440:intron | 30.0% | |
| CATTTGCTTACTGTTTATCA+AGG | + | tig0024475:47526-47545 | Msa1417440:CDS | 30.0% | |
| TGATTATAGCATTGCATTGA+GGG | - | tig0024475:47675-47694 | None:intergenic | 30.0% | |
| !!! | CTTGCTTTTGGTTTTTGAAA+GGG | + | tig0024475:47828-47847 | Msa1417440:intron | 30.0% |
| ! | TCTGAATACACTGTAAGTTT+TGG | + | tig0024475:47894-47913 | Msa1417440:intron | 30.0% |
| ATAGTAGTTACTACCAGTTA+CGG | + | tig0024475:47963-47982 | Msa1417440:intron | 30.0% | |
| ! | GTTTTCAGCTTAATTCAACA+AGG | + | tig0024475:48119-48138 | Msa1417440:intron | 30.0% |
| ACAAGGTCAAAAATTCTTTC+TGG | + | tig0024475:48136-48155 | Msa1417440:CDS | 30.0% | |
| TAACTATTTCAGCAGTACTT+TGG | - | tig0024475:48268-48287 | None:intergenic | 30.0% | |
| CTAGACTAGAAATTACGATT+AGG | + | tig0024475:48355-48374 | Msa1417440:intron | 30.0% | |
| AGACAGTAGAAAATAAACAG+TGG | - | tig0024475:48710-48729 | None:intergenic | 30.0% | |
| CACAAAACACAATGAATATG+GGG | - | tig0024475:48758-48777 | None:intergenic | 30.0% | |
| CCACAAAACACAATGAATAT+GGG | - | tig0024475:48759-48778 | None:intergenic | 30.0% | |
| TCCACAAAACACAATGAATA+TGG | - | tig0024475:48760-48779 | None:intergenic | 30.0% | |
| GTATAATGATCCATACAACT+CGG | + | tig0024475:48948-48967 | Msa1417440:CDS | 30.0% | |
| TGGATTCAAACAAAGATTGA+GGG | + | tig0024475:48989-49008 | Msa1417440:CDS | 30.0% | |
| CTATATGTCAAATGATTGTG+GGG | - | tig0024475:49125-49144 | None:intergenic | 30.0% | |
| TTGCAGAATTAATGCAAAGA+AGG | - | tig0024475:49173-49192 | None:intergenic | 30.0% | |
| !! | TTTCATCTTTTTCTAGCATG+TGG | + | tig0024475:49206-49225 | Msa1417440:intron | 30.0% |
| !! | TTCATCTTTTTCTAGCATGT+GGG | + | tig0024475:49207-49226 | Msa1417440:intron | 30.0% |
| !! | TTTGGGTTGTTATCTATGAT+AGG | + | tig0024475:49742-49761 | Msa1417440:intron | 30.0% |
| TTACTATGTTAACTGTGGTA+AGG | - | tig0024475:49795-49814 | None:intergenic | 30.0% | |
| AAAGGATCGTTAGTAAGATA+TGG | - | tig0024475:50256-50275 | None:intergenic | 30.0% | |
| ATATCTTACTAACGATCCTT+TGG | + | tig0024475:50255-50274 | Msa1417440:intron | 30.0% | |
| TATCAATATCTGCAATCCAA+AGG | - | tig0024475:50274-50293 | None:intergenic | 30.0% | |
| ! | TGTGAAAACTTCACATTTTG+AGG | + | tig0024475:50302-50321 | Msa1417440:CDS | 30.0% |
| AGTACTTTACCTTAACACAA+AGG | - | tig0024475:50332-50351 | None:intergenic | 30.0% | |
| !!! | TCCTGATTTTTTGTATATGC+CGG | + | tig0024475:50433-50452 | Msa1417440:intron | 30.0% |
| !! | TGTACTTGACTTCTGTTTTT+GGG | + | tig0024475:50528-50547 | Msa1417440:intron | 30.0% |
| !! | GATGTTGGTTTAAATAGTAC+AGG | + | tig0024475:50655-50674 | Msa1417440:intron | 30.0% |
| ! | TGTATATTTTCTGAACTGTC+CGG | - | tig0024475:51183-51202 | None:intergenic | 30.0% |
| ! | TGCAAAATTCTCATCACTTT+TGG | - | tig0024475:51401-51420 | None:intergenic | 30.0% |
| ! | AAAAGTGATGAGAATTTTGC+AGG | + | tig0024475:51400-51419 | Msa1417440:CDS | 30.0% |
| !!! | TCTTCTGCAGTTTCTTTTTT+AGG | - | tig0024475:51544-51563 | None:intergenic | 30.0% |
| AGAAGAGAATATTCTTCTTG+GGG | + | tig0024475:51747-51766 | Msa1417440:CDS | 30.0% | |
| AAAAAGAACTCTTCCAATTG+AGG | + | tig0024475:51786-51805 | Msa1417440:CDS | 30.0% | |
| !! | TAGTCATTTTGCTTAGCATT+TGG | - | tig0024475:51925-51944 | None:intergenic | 30.0% |
| !!! | GACATTTTAGTTTATGCCTT+AGG | + | tig0024475:51975-51994 | Msa1417440:three_prime_UTR | 30.0% |
| TTGGTTGGAACTTCGAAAAA+GGG | - | tig0024475:44431-44450 | None:intergenic | 35.0% | |
| TTTGGTTGGAACTTCGAAAA+AGG | - | tig0024475:44432-44451 | None:intergenic | 35.0% | |
| ! | AAGGCAAAGAAGGTATGATT+TGG | - | tig0024475:44571-44590 | None:intergenic | 35.0% |
| GGCTTGGAAGAAATTAATAG+AGG | - | tig0024475:44639-44658 | None:intergenic | 35.0% | |
| ! | CTTACTTCGCCAAAACTTTT+AGG | + | tig0024475:44754-44773 | Msa1417440:intron | 35.0% |
| AGTTGAAAAGGTGAAGTGAT+TGG | + | tig0024475:44858-44877 | Msa1417440:five_prime_UTR | 35.0% | |
| GAGAAAATTGCATAGAACCT+GGG | - | tig0024475:44931-44950 | None:intergenic | 35.0% | |
| TACATGATGCTGAAAACTAC+GGG | - | tig0024475:44987-45006 | None:intergenic | 35.0% | |
| CTGTTTCATTTGACAGAATC+CGG | + | tig0024475:45092-45111 | Msa1417440:intron | 35.0% | |
| AAAAAACATACCAAAGTGCG+CGG | - | tig0024475:45159-45178 | None:intergenic | 35.0% | |
| CAGAGAGTAAAGTAACAGTT+AGG | - | tig0024475:45270-45289 | None:intergenic | 35.0% | |
| ! | CTGCTAGTGTTCTTTTAACA+AGG | + | tig0024475:45470-45489 | Msa1417440:CDS | 35.0% |
| ! | GGAAACTTTTCCGAATTAAC+AGG | - | tig0024475:45513-45532 | None:intergenic | 35.0% |
| GTCTTCTGAATTCATGTTAG+TGG | + | tig0024475:45721-45740 | Msa1417440:intron | 35.0% | |
| TTATGCCAAAAATCAGATGG+GGG | - | tig0024475:45924-45943 | None:intergenic | 35.0% | |
| GTCTTCTGAATTCGTGATAA+TGG | + | tig0024475:46098-46117 | Msa1417440:intron | 35.0% | |
| AGAGAAGCGAGCTAATTATT+AGG | + | tig0024475:46192-46211 | Msa1417440:intron | 35.0% | |
| CAATATCCCACATTGATATG+TGG | - | tig0024475:46266-46285 | None:intergenic | 35.0% | |
| ATGTGGGATATTGATGTTTG+AGG | + | tig0024475:46273-46292 | Msa1417440:intron | 35.0% | |
| TGTGGGATATTGATGTTTGA+GGG | + | tig0024475:46274-46293 | Msa1417440:intron | 35.0% | |
| GATATTGATGTTTGAGGGAA+GGG | + | tig0024475:46279-46298 | Msa1417440:intron | 35.0% | |
| ! | ACTAAGTGCCTTAAGGTTTT+AGG | + | tig0024475:46478-46497 | Msa1417440:intron | 35.0% |
| CATCTTCACCTAAAACCTTA+AGG | - | tig0024475:46489-46508 | None:intergenic | 35.0% | |
| !!! | TAAGGTTTTAGGTGAAGATG+TGG | + | tig0024475:46489-46508 | Msa1417440:intron | 35.0% |
| TCATTGAAATACCAAACGTG+GGG | - | tig0024475:46573-46592 | None:intergenic | 35.0% | |
| TAGTGTCAAACCAAGTTGTA+TGG | + | tig0024475:46671-46690 | Msa1417440:intron | 35.0% | |
| TAGATACCAAAAGTTGGATG+GGG | - | tig0024475:46712-46731 | None:intergenic | 35.0% | |
| TATTCACTCCTCAGAGAAAA+AGG | - | tig0024475:46789-46808 | None:intergenic | 35.0% | |
| TCTGAGGAGTGAATATAGAT+TGG | + | tig0024475:46794-46813 | Msa1417440:intron | 35.0% | |
| GGAATCAATCGAAGCAAAAT+AGG | - | tig0024475:47053-47072 | None:intergenic | 35.0% | |
| AGCAAAGGCAATAATACCAA+GGG | - | tig0024475:47078-47097 | None:intergenic | 35.0% | |
| !! | TCAGAAAAGGTGCTAATTGT+TGG | - | tig0024475:47224-47243 | None:intergenic | 35.0% |
| AGCCATTATTATTGTGGACT+GGG | + | tig0024475:47320-47339 | Msa1417440:CDS | 35.0% | |
| TGAATCATGACTAGCAGAAT+AGG | + | tig0024475:47563-47582 | Msa1417440:intron | 35.0% | |
| GATTATAGCATTGCATTGAG+GGG | - | tig0024475:47674-47693 | None:intergenic | 35.0% | |
| CTGATTATAGCATTGCATTG+AGG | - | tig0024475:47676-47695 | None:intergenic | 35.0% | |
| CTATAAGAGACCAAAGACTA+GGG | - | tig0024475:47728-47747 | None:intergenic | 35.0% | |
| ACTATAAGAGACCAAAGACT+AGG | - | tig0024475:47729-47748 | None:intergenic | 35.0% | |
| !!! | GCTTGCTTTTGGTTTTTGAA+AGG | + | tig0024475:47827-47846 | Msa1417440:intron | 35.0% |
| !! | GGTTTTTGAAAGGGTACAAA+TGG | + | tig0024475:47837-47856 | Msa1417440:intron | 35.0% |
| GCTTAAAAGACCACAGATTA+AGG | + | tig0024475:47931-47950 | Msa1417440:intron | 35.0% | |
| AGGTCAAAAATTCTTTCTGG+AGG | + | tig0024475:48139-48158 | Msa1417440:CDS | 35.0% | |
| ACATACATTTCTTGCATCAC+TGG | - | tig0024475:48174-48193 | None:intergenic | 35.0% | |
| ACTTTGGCAGAGAAACATTA+TGG | - | tig0024475:48252-48271 | None:intergenic | 35.0% | |
| AAGCAATATACACTGCTGTT+TGG | + | tig0024475:48574-48593 | Msa1417440:CDS | 35.0% | |
| ! | AGCAATATACACTGCTGTTT+GGG | + | tig0024475:48575-48594 | Msa1417440:CDS | 35.0% |
| TCATTATTCATGGAGTTGCT+AGG | + | tig0024475:48609-48628 | Msa1417440:CDS | 35.0% | |
| ! | CCCATATTCATTGTGTTTTG+TGG | + | tig0024475:48756-48775 | Msa1417440:intron | 35.0% |
| ATATAAATGGCCGAGTTGTA+TGG | - | tig0024475:48961-48980 | None:intergenic | 35.0% | |
| GGCCATTTATATTGAATGAG+TGG | + | tig0024475:48969-48988 | Msa1417440:CDS | 35.0% | |
| GTGGATTCAAACAAAGATTG+AGG | + | tig0024475:48988-49007 | Msa1417440:CDS | 35.0% | |
| GGATTCAAACAAAGATTGAG+GGG | + | tig0024475:48990-49009 | Msa1417440:CDS | 35.0% | |
| ! | GGAAATGCATTGATGGTAAT+AGG | - | tig0024475:49152-49171 | None:intergenic | 35.0% |
| CAAAGAAGGAAATGCATTGA+TGG | - | tig0024475:49159-49178 | None:intergenic | 35.0% | |
| TCATCACCTCTAATAATGGT+TGG | - | tig0024475:49243-49262 | None:intergenic | 35.0% | |
| ACGATCATCACCTCTAATAA+TGG | - | tig0024475:49247-49266 | None:intergenic | 35.0% | |
| TTGACAGTGAACTTGTGATT+AGG | - | tig0024475:49285-49304 | None:intergenic | 35.0% | |
| ATCTGACTCAGAAATCTCAT+TGG | + | tig0024475:49316-49335 | Msa1417440:CDS | 35.0% | |
| TTTCTCATGCTTTAACAACC+TGG | + | tig0024475:49403-49422 | Msa1417440:intron | 35.0% | |
| TCTGCATGAAGAAAATGGAA+TGG | - | tig0024475:49478-49497 | None:intergenic | 35.0% | |
| TTTGGCTAAAAATCCTCAAG+TGG | + | tig0024475:49523-49542 | Msa1417440:CDS | 35.0% | |
| TGTCTATTGCACGTAATGAT+AGG | + | tig0024475:49663-49682 | Msa1417440:intron | 35.0% | |
| AGTCAAATGAGAGAATGCTT+TGG | + | tig0024475:49724-49743 | Msa1417440:intron | 35.0% | |
| GTCAAATGAGAGAATGCTTT+GGG | + | tig0024475:49725-49744 | Msa1417440:intron | 35.0% | |
| CATCAACATTCATGCAACAT+AGG | - | tig0024475:49823-49842 | None:intergenic | 35.0% | |
| CTATGTTGCATGAATGTTGA+TGG | + | tig0024475:49821-49840 | Msa1417440:intron | 35.0% | |
| !! | AAGTTTTGGTGGCACTTTTT+TGG | + | tig0024475:49936-49955 | Msa1417440:intron | 35.0% |
| !!! | AGTTTTGGTGGCACTTTTTT+GGG | + | tig0024475:49937-49956 | Msa1417440:intron | 35.0% |
| !!! | GCACTTTTTTGGGAAAAAGA+TGG | + | tig0024475:49947-49966 | Msa1417440:intron | 35.0% |
| !! | TTATGTGATTTGGTCAAGTG+TGG | + | tig0024475:49982-50001 | Msa1417440:intron | 35.0% |
| ! | GACTTGTAAAAAGTGCAATG+AGG | + | tig0024475:50009-50028 | Msa1417440:intron | 35.0% |
| ! | AGGAGAGTATATCGAATAGA+GGG | + | tig0024475:50029-50048 | Msa1417440:intron | 35.0% |
| !! | ATCTAGTCTTGTCAATGGTT+TGG | - | tig0024475:50097-50116 | None:intergenic | 35.0% |
| AACCATTGACAAGACTAGAT+TGG | + | tig0024475:50097-50116 | Msa1417440:intron | 35.0% | |
| !! | AACCAATCTAGTCTTGTCAA+TGG | - | tig0024475:50102-50121 | None:intergenic | 35.0% |
| TGTTTGATGTCTTTGATCCA+TGG | + | tig0024475:50155-50174 | Msa1417440:intron | 35.0% | |
| ATAAGAAACTGCAATTGCCT+CGG | - | tig0024475:50361-50380 | None:intergenic | 35.0% | |
| ! | CTGTACTTGACTTCTGTTTT+TGG | + | tig0024475:50527-50546 | Msa1417440:intron | 35.0% |
| AGAATCAGTCATTTACTGAC+TGG | - | tig0024475:50811-50830 | None:intergenic | 35.0% | |
| AAAGTTCCAAGAAGTCAAGA+TGG | - | tig0024475:50921-50940 | None:intergenic | 35.0% | |
| TTCTCGTTTAATGAAACAGG+AGG | + | tig0024475:51096-51115 | Msa1417440:intron | 35.0% | |
| ! | GTGGTTCTATTAGTAAGAAC+GGG | - | tig0024475:51276-51295 | None:intergenic | 35.0% |
| ! | GGTGGTTCTATTAGTAAGAA+CGG | - | tig0024475:51277-51296 | None:intergenic | 35.0% |
| GAACCACCGTATAAAGTTAA+TGG | + | tig0024475:51289-51308 | Msa1417440:CDS | 35.0% | |
| TCACCATTAACTTTATACGG+TGG | - | tig0024475:51295-51314 | None:intergenic | 35.0% | |
| !!! | TTTAGGTTGCATTGTTTTGG+AGG | - | tig0024475:51527-51546 | None:intergenic | 35.0% |
| AAAAGAAACTGCAGAAGATG+TGG | + | tig0024475:51546-51565 | Msa1417440:CDS | 35.0% | |
| AAAGAAACTGCAGAAGATGT+GGG | + | tig0024475:51547-51566 | Msa1417440:CDS | 35.0% | |
| GACTCATGGTTAGTAATAAC+AGG | - | tig0024475:51634-51653 | None:intergenic | 35.0% | |
| GCAAGATGAAGAGAAATCTT+CGG | + | tig0024475:51696-51715 | Msa1417440:CDS | 35.0% | |
| ! | AGAATATTCTCTTCTAAGGG+AGG | - | tig0024475:51742-51761 | None:intergenic | 35.0% |
| GGATTCATTTCTTCCTCAAT+TGG | - | tig0024475:51802-51821 | None:intergenic | 35.0% | |
| AATGAATCCATCTCCTAACT+CGG | + | tig0024475:51813-51832 | Msa1417440:CDS | 35.0% | |
| TTCTTATCTTTGTTAGCAGG+AGG | - | tig0024475:51880-51899 | None:intergenic | 35.0% | |
| TCCTGCTAACAAAGATAAGA+AGG | + | tig0024475:51879-51898 | Msa1417440:CDS | 35.0% | |
| TCCTTCTTATCTTTGTTAGC+AGG | - | tig0024475:51883-51902 | None:intergenic | 35.0% | |
| GCTAACAAAGATAAGAAGGA+TGG | + | tig0024475:51883-51902 | Msa1417440:CDS | 35.0% | |
| CTTAGCATTTGGAAATGAAG+AGG | - | tig0024475:51914-51933 | None:intergenic | 35.0% | |
| GCTAAGCAAAATGACTAGAT+TGG | + | tig0024475:51928-51947 | Msa1417440:exon | 35.0% | |
| ! | TTCTGAAGAACTTCAACCTA+AGG | - | tig0024475:51994-52013 | None:intergenic | 35.0% |
| !!! | TCCAGCTGTCTTTTTTAAGT+TGG | + | tig0024475:52019-52038 | Msa1417440:three_prime_UTR | 35.0% |
| TCCAACTTAAAAAAGACAGC+TGG | - | tig0024475:52023-52042 | None:intergenic | 35.0% | |
| CAACACTTATGTCAGATTCT+CGG | - | tig0024475:52148-52167 | None:intergenic | 35.0% | |
| ! | CATCTCCTTTAGAGATGATT+TGG | + | tig0024475:52222-52241 | Msa1417440:three_prime_UTR | 35.0% |
| TTGCTCCAAATCATCTCTAA+AGG | - | tig0024475:52230-52249 | None:intergenic | 35.0% | |
| TTATTCATTTATGTGGCGCC+TGG | - | tig0024475:44381-44400 | None:intergenic | 40.0% | |
| ! | TTTGCCTTTTCTTCCTCCAA+GGG | + | tig0024475:44583-44602 | Msa1417440:five_prime_UTR | 40.0% |
| TTTACCCTTGGAGGAAGAAA+AGG | - | tig0024475:44590-44609 | None:intergenic | 40.0% | |
| CATTACGAATTTACCCTTGG+AGG | - | tig0024475:44599-44618 | None:intergenic | 40.0% | |
| TCAATGCCACGGTTTCTTAA+CGG | - | tig0024475:44839-44858 | None:intergenic | 40.0% | |
| ! | ACCTTTTCAACTCAATGCCA+CGG | - | tig0024475:44850-44869 | None:intergenic | 40.0% |
| CGAGAAAATTGCATAGAACC+TGG | - | tig0024475:44932-44951 | None:intergenic | 40.0% | |
| ! | TGCAATTTTCTCGTGACGTT+AGG | + | tig0024475:44939-44958 | Msa1417440:CDS | 40.0% |
| ACATGATGCTGAAAACTACG+GGG | - | tig0024475:44986-45005 | None:intergenic | 40.0% | |
| ! | AAAGCGTTTAGGTTATTGGC+TGG | + | tig0024475:45224-45243 | Msa1417440:intron | 40.0% |
| ! | TTTAGGTTATTGGCTGGAGT+TGG | + | tig0024475:45230-45249 | Msa1417440:intron | 40.0% |
| ! | TTAGGTTATTGGCTGGAGTT+GGG | + | tig0024475:45231-45250 | Msa1417440:intron | 40.0% |
| ! | TTGTCACACCATCTTTTACG+TGG | + | tig0024475:45343-45362 | Msa1417440:CDS | 40.0% |
| ACAAAAACACTGCACCTAGA+TGG | - | tig0024475:45394-45413 | None:intergenic | 40.0% | |
| TACTTCCAGACAATAAGCAC+AGG | - | tig0024475:45761-45780 | None:intergenic | 40.0% | |
| ACTCATCTTTAAACCACCAG+AGG | + | tig0024475:45848-45867 | Msa1417440:intron | 40.0% | |
| CTATAATCAGCTTGCAGTTG+TGG | + | tig0024475:46126-46145 | Msa1417440:intron | 40.0% | |
| GGATATTGATGTTTGAGGGA+AGG | + | tig0024475:46278-46297 | Msa1417440:intron | 40.0% | |
| GTTCCACGTCGGATAATAAT+TGG | + | tig0024475:46330-46349 | Msa1417440:intron | 40.0% | |
| TAGCCAATTATTATCCGACG+TGG | - | tig0024475:46336-46355 | None:intergenic | 40.0% | |
| AATGACTAGTAAGTAGCAGG+TGG | - | tig0024475:46647-46666 | None:intergenic | 40.0% | |
| ACGAATGACTAGTAAGTAGC+AGG | - | tig0024475:46650-46669 | None:intergenic | 40.0% | |
| CTGAGAGTAACCATACAACT+TGG | - | tig0024475:46684-46703 | None:intergenic | 40.0% | |
| AGATACCAAAAGTTGGATGG+GGG | - | tig0024475:46711-46730 | None:intergenic | 40.0% | |
| ! | TGGCAGGTTGACATATATTC+TGG | + | tig0024475:46737-46756 | Msa1417440:intron | 40.0% |
| CAGCAAAGGCAATAATACCA+AGG | - | tig0024475:47079-47098 | None:intergenic | 40.0% | |
| CTCAATCCCATAAACAGCAA+AGG | - | tig0024475:47093-47112 | None:intergenic | 40.0% | |
| CAGCCATTATTATTGTGGAC+TGG | + | tig0024475:47319-47338 | Msa1417440:CDS | 40.0% | |
| ! | GCCATTATTATTGTGGACTG+GGG | + | tig0024475:47321-47340 | Msa1417440:CDS | 40.0% |
| ACAAAGCAGAAAACCGTAAC+TGG | - | tig0024475:47979-47998 | None:intergenic | 40.0% | |
| AACATTATGGACACGTCAAG+TGG | - | tig0024475:48239-48258 | None:intergenic | 40.0% | |
| TTGCTTTCCCAGCAAAATCA+AGG | - | tig0024475:48560-48579 | None:intergenic | 40.0% | |
| ! | TGCTGCTGTGTCATTATTCA+TGG | + | tig0024475:48599-48618 | Msa1417440:CDS | 40.0% |
| ! | AACAAAGATTGAGGGGTATG+AGG | + | tig0024475:48997-49016 | Msa1417440:CDS | 40.0% |
| TGGTCACCAACCATTATTAG+AGG | + | tig0024475:49234-49253 | Msa1417440:CDS | 40.0% | |
| TATTAGAGGTGATGATCGTG+AGG | + | tig0024475:49248-49267 | Msa1417440:CDS | 40.0% | |
| GCATCAGAAATTGTTTGACC+AGG | - | tig0024475:49424-49443 | None:intergenic | 40.0% | |
| TATTGTAGCTGATATGCGCA+AGG | + | tig0024475:49499-49518 | Msa1417440:CDS | 40.0% | |
| AATTTCTGTTGCTCCACTTG+AGG | - | tig0024475:49539-49558 | None:intergenic | 40.0% | |
| AGCAACAGAAATTGCACAGA+AGG | + | tig0024475:49546-49565 | Msa1417440:CDS | 40.0% | |
| GCAACAGAAATTGCACAGAA+GGG | + | tig0024475:49547-49566 | Msa1417440:CDS | 40.0% | |
| ! | ATTGCACAGAAGGGTCTTTT+TGG | + | tig0024475:49556-49575 | Msa1417440:CDS | 40.0% |
| ! | TCCTGAAAACACAGCTCTAA+AGG | + | tig0024475:49589-49608 | Msa1417440:CDS | 40.0% |
| !!! | ACCTTTAGAGCTGTGTTTTC+AGG | - | tig0024475:49593-49612 | None:intergenic | 40.0% |
| ATGATAGGTTAGTGCGACTA+AGG | + | tig0024475:49757-49776 | Msa1417440:intron | 40.0% | |
| TTAGTGCGACTAAGGCATAA+GGG | + | tig0024475:49765-49784 | Msa1417440:intron | 40.0% | |
| ! | GAGGAGAGTATATCGAATAG+AGG | + | tig0024475:50028-50047 | Msa1417440:intron | 40.0% |
| TAGAGGGCTGTCTAATAGTT+AGG | + | tig0024475:50045-50064 | Msa1417440:intron | 40.0% | |
| AGAGAGACCTAGAAAACTAG+AGG | + | tig0024475:50071-50090 | Msa1417440:intron | 40.0% | |
| !! | TGAGGAGTACCTTTGTGTTA+AGG | + | tig0024475:50320-50339 | Msa1417440:CDS | 40.0% |
| TAAGAAACTGCAATTGCCTC+GGG | - | tig0024475:50360-50379 | None:intergenic | 40.0% | |
| GAGGCAATTGCAGTTTCTTA+TGG | + | tig0024475:50360-50379 | Msa1417440:intron | 40.0% | |
| GCCGGCATATACAAAAAATC+AGG | - | tig0024475:50437-50456 | None:intergenic | 40.0% | |
| GTACAGGTCCTAATCTAAGA+AGG | + | tig0024475:50671-50690 | Msa1417440:intron | 40.0% | |
| TATGTGCCATCTTGACTTCT+TGG | + | tig0024475:50912-50931 | Msa1417440:intron | 40.0% | |
| ! | CAACTCTGAGAAGATCCAAA+AGG | - | tig0024475:51126-51145 | None:intergenic | 40.0% |
| ! | ATTTTCTGAACTGTCCGGAT+GGG | - | tig0024475:51178-51197 | None:intergenic | 40.0% |
| ! | TATTTTCTGAACTGTCCGGA+TGG | - | tig0024475:51179-51198 | None:intergenic | 40.0% |
| CCTCGGAAAATATACCCTTT+GGG | + | tig0024475:51212-51231 | Msa1417440:CDS | 40.0% | |
| CTCGGAAAATATACCCTTTG+GGG | + | tig0024475:51213-51232 | Msa1417440:CDS | 40.0% | |
| GTGAAAATGGAATCCCCAAA+GGG | - | tig0024475:51229-51248 | None:intergenic | 40.0% | |
| AGTGAAAATGGAATCCCCAA+AGG | - | tig0024475:51230-51249 | None:intergenic | 40.0% | |
| CAATGAGGAAAAAGATGCCA+AGG | + | tig0024475:51351-51370 | Msa1417440:CDS | 40.0% | |
| TCCATCTAGTGTAAACTCCA+AGG | + | tig0024475:51435-51454 | Msa1417440:CDS | 40.0% | |
| TCCTTGGAGTTTACACTAGA+TGG | - | tig0024475:51439-51458 | None:intergenic | 40.0% | |
| !! | CTTTGACTTGGACTTATCCT+TGG | - | tig0024475:51455-51474 | None:intergenic | 40.0% |
| TTGAGCATCAGACTTTGACT+TGG | - | tig0024475:51467-51486 | None:intergenic | 40.0% | |
| ACTATCAGAACCCATGTTCT+GGG | - | tig0024475:51491-51510 | None:intergenic | 40.0% | |
| AACTATCAGAACCCATGTTC+TGG | - | tig0024475:51492-51511 | None:intergenic | 40.0% | |
| AGAAACTACACTATGTGCAG+GGG | - | tig0024475:51602-51621 | None:intergenic | 40.0% | |
| CAGAAACTACACTATGTGCA+GGG | - | tig0024475:51603-51622 | None:intergenic | 40.0% | |
| TCAGAAACTACACTATGTGC+AGG | - | tig0024475:51604-51623 | None:intergenic | 40.0% | |
| TTACTAACCATGAGTCTAGC+AGG | + | tig0024475:51638-51657 | Msa1417440:CDS | 40.0% | |
| TACTAACCATGAGTCTAGCA+GGG | + | tig0024475:51639-51658 | Msa1417440:CDS | 40.0% | |
| GCATTTGGAAATGAAGAGGT+TGG | - | tig0024475:51910-51929 | None:intergenic | 40.0% | |
| TTATGTCAGATTCTCGGAGT+AGG | - | tig0024475:52142-52161 | None:intergenic | 40.0% | |
| TTATGTGGCGCCTGGAAATA+TGG | - | tig0024475:44373-44392 | None:intergenic | 45.0% | |
| AATTAACCCCTCCCTTGACT+TGG | + | tig0024475:44516-44535 | Msa1417440:five_prime_UTR | 45.0% | |
| GGAGGAAGAAAAGGCAAAGA+AGG | - | tig0024475:44581-44600 | None:intergenic | 45.0% | |
| ! | CTTTGCCTTTTCTTCCTCCA+AGG | + | tig0024475:44582-44601 | Msa1417440:five_prime_UTR | 45.0% |
| AATGCCACGGTTTCTTAACG+GGG | - | tig0024475:44837-44856 | None:intergenic | 45.0% | |
| CAATGCCACGGTTTCTTAAC+GGG | - | tig0024475:44838-44857 | None:intergenic | 45.0% | |
| !! | ACCGTGGCATTGAGTTGAAA+AGG | + | tig0024475:44846-44865 | Msa1417440:five_prime_UTR | 45.0% |
| ATTTCAACAATGGCGTACCC+AGG | + | tig0024475:44911-44930 | Msa1417440:CDS | 45.0% | |
| ! | GAATCTTTTACCGCGCACTT+TGG | + | tig0024475:45146-45165 | Msa1417440:CDS | 45.0% |
| CGTGTACTCCACGTAAAAGA+TGG | - | tig0024475:45354-45373 | None:intergenic | 45.0% | |
| ATCAGCCTGTGCTTATTGTC+TGG | + | tig0024475:45753-45772 | Msa1417440:intron | 45.0% | |
| AAAATCAGATGGGGGTAGGA+GGG | - | tig0024475:45916-45935 | None:intergenic | 45.0% | |
| AAAAATCAGATGGGGGTAGG+AGG | - | tig0024475:45917-45936 | None:intergenic | 45.0% | |
| ! | TCCTACCCCCATCTGATTTT+TGG | + | tig0024475:45916-45935 | Msa1417440:intron | 45.0% |
| ATCAGCTTGCAGTTGTGGTT+TGG | + | tig0024475:46131-46150 | Msa1417440:intron | 45.0% | |
| ATTAGGACCCTTAAGAGACC+AGG | + | tig0024475:46209-46228 | Msa1417440:intron | 45.0% | |
| GTGATGTCCTGGTCTCTTAA+GGG | - | tig0024475:46219-46238 | None:intergenic | 45.0% | |
| TGTGATGTCCTGGTCTCTTA+AGG | - | tig0024475:46220-46239 | None:intergenic | 45.0% | |
| TCGACGCCACATATCAATGT+GGG | + | tig0024475:46257-46276 | Msa1417440:intron | 45.0% | |
| CACACACACTAAGTGCCTTA+AGG | + | tig0024475:46471-46490 | Msa1417440:intron | 45.0% | |
| GAGAGCAACAACGAGCTAAT+GGG | - | tig0024475:46535-46554 | None:intergenic | 45.0% | |
| AAGGCAATAATACCAAGGGC+TGG | - | tig0024475:47074-47093 | None:intergenic | 45.0% | |
| GCCCCAGTCCACAATAATAA+TGG | - | tig0024475:47325-47344 | None:intergenic | 45.0% | |
| TCAACACTGTCAGGCACTTA+CGG | - | tig0024475:47389-47408 | None:intergenic | 45.0% | |
| TACGATCAGTCAACACTGTC+AGG | - | tig0024475:47398-47417 | None:intergenic | 45.0% | |
| ! | GTCTGAGATGGCAGGATTAT+TGG | - | tig0024475:47447-47466 | None:intergenic | 45.0% |
| AGACCACAGATTAAGGACGA+TGG | + | tig0024475:47938-47957 | Msa1417440:intron | 45.0% | |
| GACCACAGATTAAGGACGAT+GGG | + | tig0024475:47939-47958 | Msa1417440:intron | 45.0% | |
| TTCCCATCGTCCTTAATCTG+TGG | - | tig0024475:47944-47963 | None:intergenic | 45.0% | |
| ! | AGATGGGCCTTGATTTTGCT+GGG | + | tig0024475:48550-48569 | Msa1417440:intron | 45.0% |
| TAGGTTTCTCCACACAGAAG+TGG | + | tig0024475:48628-48647 | Msa1417440:CDS | 45.0% | |
| AGCAGTTAACCACTTCTGTG+TGG | - | tig0024475:48640-48659 | None:intergenic | 45.0% | |
| ACACAGAAGTGGTTAACTGC+TGG | + | tig0024475:48639-48658 | Msa1417440:CDS | 45.0% | |
| TGGTTAACTGCTGGTGGTTT+GGG | + | tig0024475:48648-48667 | Msa1417440:CDS | 45.0% | |
| ACAGTATTGCTCACTCTTGC+CGG | + | tig0024475:48672-48691 | Msa1417440:CDS | 45.0% | |
| ! | ATTGAGGGGTATGAGGTTTC+TGG | + | tig0024475:49004-49023 | Msa1417440:CDS | 45.0% |
| !! | TCTTTTTCTAGCATGTGGGC+TGG | + | tig0024475:49211-49230 | Msa1417440:intron | 45.0% |
| ! | AGCTGATATGCGCAAGGTTT+TGG | + | tig0024475:49505-49524 | Msa1417440:CDS | 45.0% |
| GTTAGTGCGACTAAGGCATA+AGG | + | tig0024475:49764-49783 | Msa1417440:intron | 45.0% | |
| TAGTGCGACTAAGGCATAAG+GGG | + | tig0024475:49766-49785 | Msa1417440:intron | 45.0% | |
| !!! | GGTTTGGCCTCTAGTTTTCT+AGG | - | tig0024475:50081-50100 | None:intergenic | 45.0% |
| TCTACTTAGCTCAGCCTAGT+AGG | + | tig0024475:50180-50199 | Msa1417440:intron | 45.0% | |
| ! | GGTAAAGTACTACATACCCG+AGG | + | tig0024475:50341-50360 | Msa1417440:intron | 45.0% |
| AAGGCAAAGATACCAAACCG+TGG | - | tig0024475:50843-50862 | None:intergenic | 45.0% | |
| AACTTTCATGCTCCCTTGCA+GGG | + | tig0024475:50935-50954 | Msa1417440:intron | 45.0% | |
| !!! | CTCTTTTTTCACCCCTGCAA+GGG | - | tig0024475:50950-50969 | None:intergenic | 45.0% |
| !!! | ACTCTTTTTTCACCCCTGCA+AGG | - | tig0024475:50951-50970 | None:intergenic | 45.0% |
| ! | GAAACAGGAGGCAATCCTTT+TGG | + | tig0024475:51108-51127 | Msa1417440:intron | 45.0% |
| AATATACAGTGAGCCTGCCT+CGG | + | tig0024475:51195-51214 | Msa1417440:CDS | 45.0% | |
| !! | AAGGGTATATTTTCCGAGGC+AGG | - | tig0024475:51211-51230 | None:intergenic | 45.0% |
| GCCTCGGAAAATATACCCTT+TGG | + | tig0024475:51211-51230 | Msa1417440:CDS | 45.0% | |
| !! | CCCAAAGGGTATATTTTCCG+AGG | - | tig0024475:51215-51234 | None:intergenic | 45.0% |
| ! | TGCTCTGGATCGAGTGAAAA+TGG | - | tig0024475:51242-51261 | None:intergenic | 45.0% |
| TGATGCTCAAACCCAGAACA+TGG | + | tig0024475:51477-51496 | Msa1417440:CDS | 45.0% | |
| GATGCTCAAACCCAGAACAT+GGG | + | tig0024475:51478-51497 | Msa1417440:CDS | 45.0% | |
| ! | CATGGGTTCTGATAGTTCAG+TGG | + | tig0024475:51495-51514 | Msa1417440:CDS | 45.0% |
| ACTGCAGAAGATGTGGGAAA+AGG | + | tig0024475:51553-51572 | Msa1417440:CDS | 45.0% | |
| ! | ACACTATGTGCAGGGGTTTT+AGG | - | tig0024475:51595-51614 | None:intergenic | 45.0% |
| GGAGGTTTAACTGCTGATGA+TGG | - | tig0024475:51724-51743 | None:intergenic | 45.0% | |
| !! | CACAAGAGTTTGCTGTCCAA+CGG | + | tig0024475:51842-51861 | Msa1417440:CDS | 45.0% |
| !! | AGTTTGCTGTCCAACGGAAT+GGG | + | tig0024475:51848-51867 | Msa1417440:CDS | 45.0% |
| AGATTCTCGGAGTAGGAAAC+AGG | - | tig0024475:52135-52154 | None:intergenic | 45.0% | |
| !! | GTAATTAAAATTAAAATATT+TGG | - | tig0024475:44450-44469 | None:intergenic | 5.0% |
| !!! | AGTTATTTTTATTTATTAAA+TGG | + | tig0024475:49094-49113 | Msa1417440:intron | 5.0% |
| !!! | GTTATTTTTATTTATTAAAT+GGG | + | tig0024475:49095-49114 | Msa1417440:intron | 5.0% |
| !!! | ATTAAACTTATTTTTTTAAA+AGG | - | tig0024475:49854-49873 | None:intergenic | 5.0% |
| TCCTCATCCAAGTCAAGGGA+GGG | - | tig0024475:44526-44545 | None:intergenic | 50.0% | |
| CTCCTCCTCATCCAAGTCAA+GGG | - | tig0024475:44530-44549 | None:intergenic | 50.0% | |
| GTAACCCCGTTAAGAAACCG+TGG | + | tig0024475:44830-44849 | Msa1417440:five_prime_UTR | 50.0% | |
| TCATTTGACAGAATCCGGCG+CGG | + | tig0024475:45097-45116 | Msa1417440:intron | 50.0% | |
| AGTGCGCGGTAAAAGATTCG+TGG | - | tig0024475:45145-45164 | None:intergenic | 50.0% | |
| ! | TAGATGGCGCATGCCTTGTT+GGG | - | tig0024475:45378-45397 | None:intergenic | 50.0% |
| GTTTGACACTAGACGACCTC+TGG | - | tig0024475:45867-45886 | None:intergenic | 50.0% | |
| AAATCAGATGGGGGTAGGAG+GGG | - | tig0024475:45915-45934 | None:intergenic | 50.0% | |
| GCCAAAAATCAGATGGGGGT+AGG | - | tig0024475:45920-45939 | None:intergenic | 50.0% | |
| CACATTGATATGTGGCGTCG+AGG | - | tig0024475:46258-46277 | None:intergenic | 50.0% | |
| CTCGACGCCACATATCAATG+TGG | + | tig0024475:46256-46275 | Msa1417440:intron | 50.0% | |
| !! | GTGAGTTGTTGGTTCCACGT+CGG | + | tig0024475:46319-46338 | Msa1417440:intron | 50.0% |
| CGAGAGCAACAACGAGCTAA+TGG | - | tig0024475:46536-46555 | None:intergenic | 50.0% | |
| TACCAAACGTGGGGAGTCTT+GGG | - | tig0024475:46564-46583 | None:intergenic | 50.0% | |
| ATACCAAACGTGGGGAGTCT+TGG | - | tig0024475:46565-46584 | None:intergenic | 50.0% | |
| ! | CTTCGATTGATTCCAGCCCT+TGG | + | tig0024475:47059-47078 | Msa1417440:CDS | 50.0% |
| ATCCTGCTGAGACGAAGTAG+TGG | - | tig0024475:47116-47135 | None:intergenic | 50.0% | |
| TTCAGAGGACTGACAGCAGT+TGG | + | tig0024475:47257-47276 | Msa1417440:intron | 50.0% | |
| CAACACTGTCAGGCACTTAC+GGG | - | tig0024475:47388-47407 | None:intergenic | 50.0% | |
| !! | ACGACCTGACTAGTCTGAGA+TGG | - | tig0024475:47459-47478 | None:intergenic | 50.0% |
| ! | CTCCTTCTGTCCCTAGTCTT+TGG | + | tig0024475:47715-47734 | Msa1417440:intron | 50.0% |
| GACCAAAGACTAGGGACAGA+AGG | - | tig0024475:47720-47739 | None:intergenic | 50.0% | |
| ! | CAGATGGGCCTTGATTTTGC+TGG | + | tig0024475:48549-48568 | Msa1417440:intron | 50.0% |
| CAGAAGTGGTTAACTGCTGG+TGG | + | tig0024475:48642-48661 | Msa1417440:CDS | 50.0% | |
| GTGGTTAACTGCTGGTGGTT+TGG | + | tig0024475:48647-48666 | Msa1417440:CDS | 50.0% | |
| !! | TGAGGTTTCTGGCACAGTTG+AGG | + | tig0024475:49015-49034 | Msa1417440:CDS | 50.0% |
| !!! | TTTTCTAGCATGTGGGCTGG+TGG | + | tig0024475:49214-49233 | Msa1417440:intron | 50.0% |
| GCGGCTGCACAACATTAGAT+AGG | + | tig0024475:49884-49903 | Msa1417440:intron | 50.0% | |
| GCTGAGCTAAGTAGACTCCA+TGG | - | tig0024475:50175-50194 | None:intergenic | 50.0% | |
| AAGATACCAAACCGTGGTCG+TGG | - | tig0024475:50837-50856 | None:intergenic | 50.0% | |
| GAACTTTCATGCTCCCTTGC+AGG | + | tig0024475:50934-50953 | Msa1417440:intron | 50.0% | |
| ACTTTCATGCTCCCTTGCAG+GGG | + | tig0024475:50936-50955 | Msa1417440:intron | 50.0% | |
| TTGTCAGTCATCATCGAGCC+CGG | + | tig0024475:51143-51162 | Msa1417440:CDS | 50.0% | |
| ! | CCACGAGTTGAACGAGTTGA+CGG | - | tig0024475:51331-51350 | None:intergenic | 50.0% |
| TCGTTCAACTCGTGGCAATG+AGG | + | tig0024475:51336-51355 | Msa1417440:CDS | 50.0% | |
| !! | TGCCAAGGTTGATGAACCTG+TGG | + | tig0024475:51366-51385 | Msa1417440:CDS | 50.0% |
| TGCCACAGGTTCATCAACCT+TGG | - | tig0024475:51371-51390 | None:intergenic | 50.0% | |
| !!! | CTTTTGGAGTCTGATGCCAC+AGG | - | tig0024475:51385-51404 | None:intergenic | 50.0% |
| !!! | TGTGCAGGGGTTTTAGGTAC+AGG | - | tig0024475:51589-51608 | None:intergenic | 50.0% |
| CTTCTTGGGGTTGCACTTGA+AGG | + | tig0024475:51760-51779 | Msa1417440:CDS | 50.0% | |
| TCTTGTGACTCAGCCGAGTT+AGG | - | tig0024475:51829-51848 | None:intergenic | 50.0% | |
| !! | GAGTTTGCTGTCCAACGGAA+TGG | + | tig0024475:51847-51866 | Msa1417440:CDS | 50.0% |
| CCTCATCCAAGTCAAGGGAG+GGG | - | tig0024475:44525-44544 | None:intergenic | 55.0% | |
| CTCCTCATCCAAGTCAAGGG+AGG | - | tig0024475:44527-44546 | None:intergenic | 55.0% | |
| !! | CTCCCTTGACTTGGATGAGG+AGG | + | tig0024475:44525-44544 | Msa1417440:five_prime_UTR | 55.0% |
| CCTCCTCCTCATCCAAGTCA+AGG | - | tig0024475:44531-44550 | None:intergenic | 55.0% | |
| !! | CCTTGACTTGGATGAGGAGG+AGG | + | tig0024475:44528-44547 | Msa1417440:five_prime_UTR | 55.0% |
| CATTTGACAGAATCCGGCGC+GGG | + | tig0024475:45098-45117 | Msa1417440:intron | 55.0% | |
| ! | AGATGGCGCATGCCTTGTTG+GGG | - | tig0024475:45377-45396 | None:intergenic | 55.0% |
| CTAGATGGCGCATGCCTTGT+TGG | - | tig0024475:45379-45398 | None:intergenic | 55.0% | |
| CAACAAGGCATGCGCCATCT+AGG | + | tig0024475:45377-45396 | Msa1417440:CDS | 55.0% | |
| ATGTCGCTCTGCCATCCTAC+CGG | + | tig0024475:45414-45433 | Msa1417440:CDS | 55.0% | |
| TGACACTAGACGACCTCTGG+TGG | - | tig0024475:45864-45883 | None:intergenic | 55.0% | |
| AATCAGATGGGGGTAGGAGG+GGG | - | tig0024475:45914-45933 | None:intergenic | 55.0% | |
| TGGGTGGAGATGTGATGTCC+TGG | - | tig0024475:46230-46249 | None:intergenic | 55.0% | |
| ! | ATGTGGCGTCGAGGTCTCTT+GGG | - | tig0024475:46249-46268 | None:intergenic | 55.0% |
| ! | TATGTGGCGTCGAGGTCTCT+TGG | - | tig0024475:46250-46269 | None:intergenic | 55.0% |
| ACCAAACGTGGGGAGTCTTG+GGG | - | tig0024475:46563-46582 | None:intergenic | 55.0% | |
| ! | GCGTACCCCCATCCAACTTT+TGG | + | tig0024475:46703-46722 | Msa1417440:intron | 55.0% |
| AGCCACTACTTCGTCTCAGC+AGG | + | tig0024475:47111-47130 | Msa1417440:CDS | 55.0% | |
| CTGGGGCAATGCTCATATGC+AGG | + | tig0024475:47338-47357 | Msa1417440:CDS | 55.0% | |
| !! | CCTGACTAGTCTGAGATGGC+AGG | - | tig0024475:47455-47474 | None:intergenic | 55.0% |
| ! | CCTGCCATCTCAGACTAGTC+AGG | + | tig0024475:47452-47471 | Msa1417440:CDS | 55.0% |
| ACAGTGGTGTACCTCTCGAC+CGG | - | tig0024475:48694-48713 | None:intergenic | 55.0% | |
| CTGATTCTCAGCCACGACCA+CGG | + | tig0024475:50823-50842 | Msa1417440:intron | 55.0% | |
| CCGTCAACTCGTTCAACTCG+TGG | + | tig0024475:51328-51347 | Msa1417440:CDS | 55.0% | |
| TGTCTGCCCTGCTAGACTCA+TGG | - | tig0024475:51648-51667 | None:intergenic | 55.0% | |
| GACTCAGCCGAGTTAGGAGA+TGG | - | tig0024475:51823-51842 | None:intergenic | 55.0% | |
| GCTGTCCAACGGAATGGGAA+TGG | + | tig0024475:51853-51872 | Msa1417440:CDS | 55.0% | |
| GAGGTCCATTCCCATTCCGT+TGG | - | tig0024475:51861-51880 | None:intergenic | 55.0% | |
| !! | CCCCTCCCTTGACTTGGATG+AGG | + | tig0024475:44522-44541 | Msa1417440:five_prime_UTR | 60.0% |
| TGTAATCGTCCAACCCGCGC+CGG | - | tig0024475:45114-45133 | None:intergenic | 60.0% | |
| GTGGAGTACACGCCCCAACA+AGG | + | tig0024475:45362-45381 | Msa1417440:CDS | 60.0% | |
| TGTCGCTCTGCCATCCTACC+GGG | + | tig0024475:45415-45434 | Msa1417440:CDS | 60.0% | |
| ATCAGATGGGGGTAGGAGGG+GGG | - | tig0024475:45913-45932 | None:intergenic | 60.0% | |
| ACCCCAAGACTCCCCACGTT+TGG | + | tig0024475:46559-46578 | Msa1417440:intron | 60.0% | |
| TCTCAGCCACGACCACGGTT+TGG | + | tig0024475:50828-50847 | Msa1417440:intron | 60.0% | |
| TCCGGATGGGAGTGGCTAAC+CGG | - | tig0024475:51165-51184 | None:intergenic | 60.0% | |
| CTGAACTGTCCGGATGGGAG+TGG | - | tig0024475:51173-51192 | None:intergenic | 60.0% | |
| TGACAGAATCCGGCGCGGGT+TGG | + | tig0024475:45102-45121 | Msa1417440:intron | 65.0% | |
| TCTGCCATCCTACCGGGTGG+TGG | + | tig0024475:45421-45440 | Msa1417440:CDS | 65.0% | |
| !! | CCATCCTACCGGGTGGTGGA+GGG | + | tig0024475:45425-45444 | Msa1417440:CDS | 65.0% |
| !! | TACCGGGTGGTGGAGGGAGT+GGG | + | tig0024475:45431-45450 | Msa1417440:CDS | 65.0% |
| ! | TGGCGTCGAGGTCTCTTGGG+TGG | - | tig0024475:46246-46265 | None:intergenic | 65.0% |
| GCTCACTCTTGCCGGTCGAG+AGG | + | tig0024475:48680-48699 | Msa1417440:CDS | 65.0% | |
| CCGGATGGGAGTGGCTAACC+GGG | - | tig0024475:51164-51183 | None:intergenic | 65.0% | |
| ! | CCCGGTTAGCCACTCCCATC+CGG | + | tig0024475:51161-51180 | Msa1417440:CDS | 65.0% |
| CGGGCGATTCACTGCTGCTC+TGG | - | tig0024475:51257-51276 | None:intergenic | 65.0% | |
| CGCTCTGCCATCCTACCGGG+TGG | + | tig0024475:45418-45437 | Msa1417440:CDS | 70.0% | |
| ! | GCCATCCTACCGGGTGGTGG+AGG | + | tig0024475:45424-45443 | Msa1417440:CDS | 70.0% |
| CCCTCCACCACCCGGTAGGA+TGG | - | tig0024475:45428-45447 | None:intergenic | 70.0% | |
| CACTCCCTCCACCACCCGGT+AGG | - | tig0024475:45432-45451 | None:intergenic | 70.0% | |
| !! | CTACCGGGTGGTGGAGGGAG+TGG | + | tig0024475:45430-45449 | Msa1417440:CDS | 70.0% |
| GTCCCACTCCCTCCACCACC+CGG | - | tig0024475:45436-45455 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024475 | gene | 44362 | 52272 | 44362 | ID=Msa1417440;Name=Msa1417440 |
| tig0024475 | mRNA | 44362 | 52272 | 44362 | ID=Msa1417440-mRNA-1;Parent=Msa1417440;Name=Msa1417440-mRNA-1;_AED=0.24;_eAED=0.24;_QI=407|1|1|1|0.92|0.85|14|327|721 |
| tig0024475 | exon | 44362 | 44699 | 44362 | ID=Msa1417440-mRNA-1:exon:23403;Parent=Msa1417440-mRNA-1 |
| tig0024475 | exon | 44818 | 45003 | 44818 | ID=Msa1417440-mRNA-1:exon:23404;Parent=Msa1417440-mRNA-1 |
| tig0024475 | exon | 45108 | 45167 | 45108 | ID=Msa1417440-mRNA-1:exon:23405;Parent=Msa1417440-mRNA-1 |
| tig0024475 | exon | 45331 | 45491 | 45331 | ID=Msa1417440-mRNA-1:exon:23406;Parent=Msa1417440-mRNA-1 |
| tig0024475 | exon | 47025 | 47148 | 47025 | ID=Msa1417440-mRNA-1:exon:23407;Parent=Msa1417440-mRNA-1 |
| tig0024475 | exon | 47262 | 47359 | 47262 | ID=Msa1417440-mRNA-1:exon:23408;Parent=Msa1417440-mRNA-1 |
| tig0024475 | exon | 47434 | 47547 | 47434 | ID=Msa1417440-mRNA-1:exon:23409;Parent=Msa1417440-mRNA-1 |
| tig0024475 | exon | 48127 | 48187 | 48127 | ID=Msa1417440-mRNA-1:exon:23410;Parent=Msa1417440-mRNA-1 |
| tig0024475 | exon | 48552 | 48701 | 48552 | ID=Msa1417440-mRNA-1:exon:23411;Parent=Msa1417440-mRNA-1 |
| tig0024475 | exon | 48926 | 49036 | 48926 | ID=Msa1417440-mRNA-1:exon:23412;Parent=Msa1417440-mRNA-1 |
| tig0024475 | exon | 49222 | 49389 | 49222 | ID=Msa1417440-mRNA-1:exon:23413;Parent=Msa1417440-mRNA-1 |
| tig0024475 | exon | 49497 | 49610 | 49497 | ID=Msa1417440-mRNA-1:exon:23414;Parent=Msa1417440-mRNA-1 |
| tig0024475 | exon | 50285 | 50341 | 50285 | ID=Msa1417440-mRNA-1:exon:23415;Parent=Msa1417440-mRNA-1 |
| tig0024475 | exon | 51115 | 52272 | 51115 | ID=Msa1417440-mRNA-1:exon:23416;Parent=Msa1417440-mRNA-1 |
| tig0024475 | five_prime_UTR | 44362 | 44699 | 44362 | ID=Msa1417440-mRNA-1:five_prime_utr;Parent=Msa1417440-mRNA-1 |
| tig0024475 | five_prime_UTR | 44818 | 44886 | 44818 | ID=Msa1417440-mRNA-1:five_prime_utr;Parent=Msa1417440-mRNA-1 |
| tig0024475 | CDS | 44887 | 45003 | 44887 | ID=Msa1417440-mRNA-1:cds;Parent=Msa1417440-mRNA-1 |
| tig0024475 | CDS | 45108 | 45167 | 45108 | ID=Msa1417440-mRNA-1:cds;Parent=Msa1417440-mRNA-1 |
| tig0024475 | CDS | 45331 | 45491 | 45331 | ID=Msa1417440-mRNA-1:cds;Parent=Msa1417440-mRNA-1 |
| tig0024475 | CDS | 47025 | 47148 | 47025 | ID=Msa1417440-mRNA-1:cds;Parent=Msa1417440-mRNA-1 |
| tig0024475 | CDS | 47262 | 47359 | 47262 | ID=Msa1417440-mRNA-1:cds;Parent=Msa1417440-mRNA-1 |
| tig0024475 | CDS | 47434 | 47547 | 47434 | ID=Msa1417440-mRNA-1:cds;Parent=Msa1417440-mRNA-1 |
| tig0024475 | CDS | 48127 | 48187 | 48127 | ID=Msa1417440-mRNA-1:cds;Parent=Msa1417440-mRNA-1 |
| tig0024475 | CDS | 48552 | 48701 | 48552 | ID=Msa1417440-mRNA-1:cds;Parent=Msa1417440-mRNA-1 |
| tig0024475 | CDS | 48926 | 49036 | 48926 | ID=Msa1417440-mRNA-1:cds;Parent=Msa1417440-mRNA-1 |
| tig0024475 | CDS | 49222 | 49389 | 49222 | ID=Msa1417440-mRNA-1:cds;Parent=Msa1417440-mRNA-1 |
| tig0024475 | CDS | 49497 | 49610 | 49497 | ID=Msa1417440-mRNA-1:cds;Parent=Msa1417440-mRNA-1 |
| tig0024475 | CDS | 50285 | 50341 | 50285 | ID=Msa1417440-mRNA-1:cds;Parent=Msa1417440-mRNA-1 |
| tig0024475 | CDS | 51115 | 51945 | 51115 | ID=Msa1417440-mRNA-1:cds;Parent=Msa1417440-mRNA-1 |
| tig0024475 | three_prime_UTR | 51946 | 52272 | 51946 | ID=Msa1417440-mRNA-1:three_prime_utr;Parent=Msa1417440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
