AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0400650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0400650 MtrunA17_Chr3g0098721 96.648 358 12 0 22 379 45 402 0.0 732
Msa0400650 MtrunA17_Chr5g0443881 83.473 357 59 0 22 378 51 407 0.0 650
Msa0400650 MtrunA17_Chr1g0178831 65.363 358 123 1 22 378 48 405 0.0 509
Msa0400650 MtrunA17_Chr7g0266131 63.966 358 128 1 22 378 56 413 2.40e-179 506
Msa0400650 MtrunA17_Chr7g0266151 60.218 367 142 3 22 385 49 414 1.61e-161 460
Msa0400650 MtrunA17_Chr4g0064541 44.357 381 185 7 22 376 57 436 1.54e-98 301
Msa0400650 MtrunA17_Chr6g0453731 39.189 444 178 8 22 376 73 513 4.98e-95 295
Msa0400650 MtrunA17_Chr3g0121411 39.159 452 182 8 14 376 67 514 5.30e-94 291
Msa0400650 MtrunA17_Chr7g0236041 38.876 445 179 8 22 376 72 513 2.71e-93 290
Msa0400650 MtrunA17_Chr4g0019091 42.932 382 190 9 22 376 57 437 1.24e-92 285
Msa0400650 MtrunA17_Chr3g0121431 39.111 450 185 9 14 376 122 569 1.43e-92 289
Msa0400650 MtrunA17_Chr1g0211041 42.037 383 193 9 22 376 58 439 2.82e-89 277
Msa0400650 MtrunA17_Chr4g0019071 47.101 276 127 6 120 376 39 314 1.37e-75 238
Msa0400650 MtrunA17_Chr4g0022251 29.518 332 187 9 33 324 231 555 4.06e-35 136
Msa0400650 MtrunA17_Chr1g0173511 29.942 344 182 13 33 324 94 430 3.15e-33 129
Msa0400650 MtrunA17_Chr3g0116051 25.307 407 237 13 31 376 192 592 4.57e-24 103
Msa0400650 MtrunA17_Chr4g0043001 26.392 413 226 13 22 359 146 555 5.23e-23 100
Msa0400650 MtrunA17_Chr3g0116091 24.810 395 205 13 33 376 35 388 2.68e-22 97.8
Msa0400650 MtrunA17_Chr4g0057551 25.429 350 206 10 76 376 253 596 3.59e-22 98.6
Msa0400650 MtrunA17_Chr5g0419621 25.000 376 223 12 51 376 222 588 1.51e-21 96.7
Msa0400650 MtrunA17_Chr8g0364481 25.059 427 252 15 15 378 162 583 3.70e-21 95.5
Msa0400650 MtrunA17_Chr4g0043021 30.469 256 131 8 147 359 304 555 3.40e-20 92.4
Msa0400650 MtrunA17_Chr4g0019081 36.697 109 60 4 22 122 63 170 1.82e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0400650 AT3G20500.1 76.819 371 80 1 22 386 49 419 0.0 617
Msa0400650 AT3G52820.1 60.938 384 143 2 8 384 35 418 3.40e-178 503
Msa0400650 AT3G52810.1 60.218 367 145 1 22 387 53 419 1.22e-165 471
Msa0400650 AT3G52780.1 62.431 362 129 5 22 377 46 406 2.45e-164 467
Msa0400650 AT3G52780.2 61.644 292 105 5 22 307 46 336 1.08e-127 372
Msa0400650 AT5G34850.1 43.307 381 189 7 22 376 56 435 8.69e-97 297
Msa0400650 AT3G07130.1 41.320 409 167 5 40 376 97 504 5.04e-94 291
Msa0400650 AT1G56360.1 41.538 390 195 10 22 379 52 440 8.73e-91 281
Msa0400650 AT4G36350.1 41.538 390 194 11 22 379 53 440 5.51e-90 279
Msa0400650 AT3G07130.2 38.235 442 167 6 40 376 97 537 3.88e-87 275
Msa0400650 AT4G13700.1 41.645 377 165 7 22 345 67 441 2.11e-84 265
Msa0400650 AT2G27190.1 41.207 381 198 9 22 376 62 442 4.44e-84 264
Msa0400650 AT2G16430.2 41.361 382 196 10 22 376 61 441 2.72e-82 259
Msa0400650 AT2G18130.1 40.103 389 191 11 22 385 56 427 3.43e-81 256
Msa0400650 AT2G16430.1 42.540 315 157 9 86 376 7 321 7.36e-72 229
Msa0400650 AT2G32770.3 34.416 462 203 11 13 376 64 523 3.49e-70 230
Msa0400650 AT4G13700.2 39.286 336 149 7 22 304 67 400 5.38e-65 213
Msa0400650 AT2G32770.2 35.422 367 161 6 70 361 62 427 3.21e-62 206
Msa0400650 AT3G46120.1 34.921 378 155 10 22 378 56 363 2.25e-58 195
Msa0400650 AT2G32770.1 30.519 462 192 12 13 376 64 494 2.78e-53 185
Msa0400650 AT1G52940.1 37.168 226 124 9 22 230 17 241 5.47e-33 124
Msa0400650 AT1G13900.1 30.000 270 147 8 147 378 305 570 1.46e-21 97.1
Msa0400650 AT5G50400.2 26.000 350 204 13 76 376 165 508 6.96e-21 94.7
Msa0400650 AT4G24890.1 27.193 342 190 13 76 367 241 573 8.83e-21 94.7
Msa0400650 AT5G50400.1 26.000 350 204 13 76 376 237 580 9.53e-21 94.7
Msa0400650 AT2G03450.1 29.927 274 143 10 147 378 304 570 1.03e-20 94.7
Msa0400650 AT1G13750.1 25.501 349 207 10 76 376 239 582 3.18e-20 93.2

Find 126 sgRNAs with CRISPR-Local

Find 500 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGACCACAGCAAAACTAAT+TGG 0.216017 3_2:-25130489 None:intergenic
AGAGCATATACCTTTGTTAA+AGG 0.247102 3_2:+25130704 Msa0400650:CDS
AGATCAGACGACTTATATTT+AGG 0.263791 3_2:+25129476 Msa0400650:five_prime_UTR
AAACTATCGTGGAGAGCTTA+TGG 0.300724 3_2:-25130080 None:intergenic
AAGATACACCATACGGTAAT+AGG 0.307628 3_2:+25130381 Msa0400650:CDS
GCACCTTCAGTTGTAGAATA+TGG 0.309081 3_2:+25130282 Msa0400650:CDS
ACGTGTATATAATGGAAAAT+TGG 0.322130 3_2:+25132804 Msa0400650:CDS
TGTACTCAGAACAATATAAA+TGG 0.325340 3_2:+25130859 Msa0400650:CDS
TAAACTCAACACATGCCTTC+TGG 0.336522 3_2:+25133100 Msa0400650:CDS
TGAAGCTGCTTGGTTGATTC+GGG 0.338606 3_2:+25129404 Msa0400650:five_prime_UTR
GTGAAGCTGCTTGGTTGATT+CGG 0.343491 3_2:+25129403 Msa0400650:five_prime_UTR
TGACAGAAACGTGTATATAA+TGG 0.346137 3_2:+25132796 Msa0400650:intron
AATCCAGGTACACATTTCTT+TGG 0.357574 3_2:+25130212 Msa0400650:CDS
GAATTCCGTGAAGCAAGTTT+TGG 0.357920 3_2:+25133057 Msa0400650:CDS
TGACATCTATTTGAAATGAT+TGG 0.358285 3_2:+25129788 Msa0400650:five_prime_UTR
TGCTTGGTTGATTCGGGAAA+TGG 0.360756 3_2:+25129410 Msa0400650:five_prime_UTR
ATAAGCTGAGGACAGCTTCT+AGG 0.362125 3_2:-25130055 None:intergenic
TTTGCTGTGGTCGGAGATCT+TGG 0.363118 3_2:+25130498 Msa0400650:CDS
CTGCAGTCAATCACAATTGC+TGG 0.371983 3_2:+25129449 Msa0400650:five_prime_UTR
TCGGCGATCATGAGCCTGTT+TGG 0.384730 3_2:+25129951 Msa0400650:five_prime_UTR
TACGATGTTAACCTGATTCC+TGG 0.388167 3_2:+25130570 Msa0400650:CDS
TTGATTTGGTCCAACCAGTT+TGG 0.390912 3_2:-25130521 None:intergenic
CCGGCTCATCATCGTCATTC+CGG 0.394998 3_2:-25133131 None:intergenic
CTTGATCCACTTTCCTCAAA+TGG 0.396116 3_2:-25130762 None:intergenic
CGGTAAAAGTAAACAGAATT+CGG 0.397092 3_2:-25130414 None:intergenic
ACGAAAGGTCGCCAGGAATC+AGG 0.398861 3_2:-25130581 None:intergenic
TCGGCATACGAAAGGTCGCC+AGG 0.422584 3_2:-25130588 None:intergenic
TCAGATTCTTATATGAAAAG+TGG 0.427777 3_2:+25130189 Msa0400650:CDS
CGGAATTCTGACCACTTTGG+CGG 0.431727 3_2:-25133042 None:intergenic
TAAACAGAATTCGGCTCTAA+AGG 0.439226 3_2:-25130405 None:intergenic
CAGGTACACATTTCTTTGGC+AGG 0.442548 3_2:+25130216 Msa0400650:CDS
ACCAAATACTAAAACATCAA+TGG 0.442618 3_2:-25129610 None:intergenic
GTTCTCTCAAACAGTCTCAT+AGG 0.442876 3_2:-25130009 None:intergenic
TTCCCTTGTGTTACCATCCA+TGG 0.444697 3_2:-25130672 None:intergenic
GTAGAAAATGTAACTGTAAG+AGG 0.446204 3_2:-25130349 None:intergenic
GATGTGATCTAATGTTGATT+TGG 0.450180 3_2:-25130535 None:intergenic
CATATACCTTTGTTAAAGGA+TGG 0.451005 3_2:+25130708 Msa0400650:CDS
AGACTGTTTGAGAGAACATA+TGG 0.452358 3_2:+25130015 Msa0400650:five_prime_UTR
TGTCAAAGGTGGACAGGAAA+AGG 0.453174 3_2:+25132531 Msa0400650:CDS
CATGACCAAAACTTGCTTCA+CGG 0.454586 3_2:-25133062 None:intergenic
GGTGCTCACATTATCATGCT+TGG 0.459315 3_2:+25130816 Msa0400650:CDS
CGACCACAGCAAAACTAATT+GGG 0.462918 3_2:-25130488 None:intergenic
TCAAAGAAGTCGGTCCAAAC+AGG 0.463684 3_2:-25129965 None:intergenic
CAGCATCGTTGGGACACGTT+TGG 0.476015 3_2:+25130618 Msa0400650:CDS
GTAGAATATGGAACATTGCC+AGG 0.476108 3_2:+25130294 Msa0400650:CDS
AATTCTGACCACTTTGGCGG+TGG 0.489479 3_2:-25133039 None:intergenic
ATTGACTGCAGTGACTCTGC+AGG 0.491494 3_2:-25129437 None:intergenic
TCATCCCTAAATATGAGAAT+CGG 0.494406 3_2:-25129730 None:intergenic
AATAGTTCTGATTTATTGTG+AGG 0.507350 3_2:+25129367 Msa0400650:five_prime_UTR
CTTAAATCCATGATGGATTG+TGG 0.510268 3_2:+25129339 Msa0400650:five_prime_UTR
CAACACATGCCTTCTGGAGT+TGG 0.510276 3_2:+25133106 Msa0400650:CDS
GTCGGAGATCTTGGCCAAAC+TGG 0.511189 3_2:+25130507 Msa0400650:CDS
CTGCCAAAGAAATGTGTACC+TGG 0.511823 3_2:-25130215 None:intergenic
CGACTATATACAGCATCGTT+GGG 0.514220 3_2:+25130608 Msa0400650:CDS
TGGATCTGTCAAAGGTGGAC+AGG 0.515700 3_2:+25132525 Msa0400650:CDS
TGATAATCTTGTCAACCTCT+AGG 0.516270 3_2:+25133330 Msa0400650:CDS
TCACGGAATTCTGACCACTT+TGG 0.520879 3_2:-25133045 None:intergenic
GGTGATGGAGGGAACAAAGA+AGG 0.525513 3_2:+25132856 Msa0400650:CDS
GATTTATATCCTATAATTCG+AGG 0.527909 3_2:+25130730 Msa0400650:CDS
TTATATGAAAAGTGGAATCC+AGG 0.529467 3_2:+25130197 Msa0400650:CDS
AAGTATTATAGACTTGTGTC+TGG 0.530246 3_2:+25129675 Msa0400650:five_prime_UTR
CCGACTATATACAGCATCGT+TGG 0.531308 3_2:+25130607 Msa0400650:CDS
TGGAGGGAACAAAGAAGGAT+TGG 0.532661 3_2:+25132861 Msa0400650:CDS
TTAGTATTTGGTTGAGTGTG+TGG 0.538102 3_2:+25129621 Msa0400650:five_prime_UTR
AGCATAAAGCAATGGCTCCA+TGG 0.538411 3_2:-25132639 None:intergenic
AAACTAATTGGGAATTGAGC+TGG 0.540026 3_2:-25130477 None:intergenic
AGACTCTTCAGTCTTTATGT+CGG 0.542626 3_2:+25129932 Msa0400650:five_prime_UTR
TTGTCATATTTCATGTGCCA+TGG 0.543326 3_2:+25132567 Msa0400650:CDS
GGTGCTGTTCATGTAACAAT+TGG 0.545245 3_2:+25132835 Msa0400650:CDS
AGAACAATATAAATGGCTAA+AGG 0.548688 3_2:+25130866 Msa0400650:CDS
ATTGCACTAAATGATCTATG+AGG 0.549961 3_2:-25129255 None:intergenic
ATGCCTTCTGGAGTTGGCAC+CGG 0.559442 3_2:+25133112 Msa0400650:CDS
GTATATAGTCGGCATACGAA+AGG 0.560724 3_2:-25130596 None:intergenic
GGTTAACATCGTATCTGCAT+TGG 0.564067 3_2:-25130560 None:intergenic
ATAAATCCATCCTTTAACAA+AGG 0.566465 3_2:-25130714 None:intergenic
AACATCAATGGACTAGACTA+CGG 0.574203 3_2:-25129598 None:intergenic
GAGATCTTGGCCAAACTGGT+TGG 0.574404 3_2:+25130511 Msa0400650:CDS
TGCTAGTTCTAGACCATGGA+TGG 0.576530 3_2:+25130659 Msa0400650:CDS
CCGGAATGACGATGATGAGC+CGG 0.578815 3_2:+25133131 Msa0400650:CDS
GAGGTGGAAAATGCCATTTG+AGG 0.583883 3_2:+25130749 Msa0400650:CDS
AAGTATGACTCGGTAGCTGA+AGG 0.586262 3_2:+25130318 Msa0400650:CDS
AAAATGCCATTTGAGGAAAG+TGG 0.586799 3_2:+25130756 Msa0400650:CDS
ACAAGCACGTGAGAATCACC+TGG 0.588099 3_2:+25130241 Msa0400650:CDS
AATAGTAACACAGCTCATCA+AGG 0.589055 3_2:+25132593 Msa0400650:CDS
GTTCCATATTCTACAACTGA+AGG 0.590950 3_2:-25130285 None:intergenic
CTAAAGGACCTATTACCGTA+TGG 0.592310 3_2:-25130389 None:intergenic
CAGGACCTTGTCCACCGCAT+CGG 0.593262 3_2:-25130434 None:intergenic
CCAACGATGCTGTATATAGT+CGG 0.594807 3_2:-25130607 None:intergenic
AGTCTAAAGACGAAAAGTGA+AGG 0.600789 3_2:-25129914 None:intergenic
GAGAGATTATTACTGTAGCA+AGG 0.605986 3_2:-25129309 None:intergenic
ATTCCGGTGCCAACTCCAGA+AGG 0.606814 3_2:-25133115 None:intergenic
ATAGATAAACTCAAAGAAGT+CGG 0.607342 3_2:-25129975 None:intergenic
GCTACCGAGTCATACTTCCC+TGG 0.609623 3_2:-25130312 None:intergenic
TTAGCGACCACAATCCATCA+TGG 0.611252 3_2:-25129346 None:intergenic
GTTCATGTAACAATTGGTGA+TGG 0.613051 3_2:+25132841 Msa0400650:CDS
TGTCCACGCATATGAACGCT+CGG 0.615743 3_2:+25132691 Msa0400650:CDS
ATCGTTGGGACACGTTTGGT+AGG 0.618657 3_2:+25130622 Msa0400650:CDS
AACACAGCTCATCAAGGTGA+AGG 0.620113 3_2:+25132599 Msa0400650:CDS
ATGTAACAATTGGTGATGGA+GGG 0.620250 3_2:+25132845 Msa0400650:CDS
TGAAATATGACAAGCAACCA+AGG 0.623138 3_2:-25132557 None:intergenic
ACGCTAGCAGCATAAAGCAA+TGG 0.624653 3_2:-25132647 None:intergenic
CATGTAACAATTGGTGATGG+AGG 0.625889 3_2:+25132844 Msa0400650:CDS
TGGACAGGAAAAGGACACCT+TGG 0.626466 3_2:+25132540 Msa0400650:CDS
CTCAGGAAAGATACACCATA+CGG 0.635954 3_2:+25130374 Msa0400650:CDS
ACAGCTCATCAAGGTGAAGG+TGG 0.636860 3_2:+25132602 Msa0400650:CDS
TAGAATATGGAACATTGCCA+GGG 0.638513 3_2:+25130295 Msa0400650:CDS
ATATAGATCCACCGCCAAAG+TGG 0.638937 3_2:+25133031 Msa0400650:CDS
ACAGATGGATCTGTCAAAGG+TGG 0.639546 3_2:+25132520 Msa0400650:intron
TTATATCCTATAATTCGAGG+TGG 0.646759 3_2:+25130733 Msa0400650:CDS
TCTACAGATGGATCTGTCAA+AGG 0.647219 3_2:+25132517 Msa0400650:intron
CTTATGAAGTTATGAATGTG+TGG 0.653635 3_2:+25129567 Msa0400650:five_prime_UTR
AGATTTGTCATCAGTAACCC+AGG 0.657654 3_2:-25130259 None:intergenic
TTGACTGCAGTGACTCTGCA+GGG 0.666812 3_2:-25129436 None:intergenic
CACTTGCTAGTTCTAGACCA+TGG 0.671317 3_2:+25130655 Msa0400650:CDS
GAGCTTATGGAAATAAGCTG+AGG 0.674263 3_2:-25130067 None:intergenic
CATGGTCTAGAACTAGCAAG+TGG 0.681335 3_2:-25130654 None:intergenic
AGACCATGGATGGTAACACA+AGG 0.685999 3_2:+25130669 Msa0400650:CDS
CTAATTGGGAATTGAGCTGG+TGG 0.690740 3_2:-25130474 None:intergenic
GTTACATGAACAGCACCACA+AGG 0.694159 3_2:-25132829 None:intergenic
ATACCGAGCGTTCATATGCG+TGG 0.697158 3_2:-25132694 None:intergenic
AATGGAAAATTGGATCCTTG+TGG 0.706470 3_2:+25132814 Msa0400650:CDS
CAAGCACGTGAGAATCACCT+GGG 0.708786 3_2:+25130242 Msa0400650:CDS
ATTGCCAGGGAAGTATGACT+CGG 0.709876 3_2:+25130308 Msa0400650:CDS
GACCATGGATGGTAACACAA+GGG 0.712669 3_2:+25130670 Msa0400650:CDS
GCTGTGTTACTATTATACCA+TGG 0.712732 3_2:-25132584 None:intergenic
TGGTGATATGATGAAAACCA+TGG 0.721681 3_2:+25132622 Msa0400650:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTGTTCTTTTA+TGG + chr3_2:25129277-25129296 Msa0400650:five_prime_UTR 10.0%
!!! TTTTTTTTTTTGTTCTTTTA+TGG + chr3_2:25129277-25129296 Msa0400650:five_prime_UTR 10.0%
!!! TCATTTTCTCAAATTATTAT+CGG - chr3_2:25131109-25131128 None:intergenic 15.0%
!!! GTTTGTTTTAAATTTAATTC+TGG + chr3_2:25132384-25132403 Msa0400650:intron 15.0%
!! ATCTTAATTTACACTTAAAA+AGG - chr3_2:25132978-25132997 None:intergenic 15.0%
!!! TCATTTTCTCAAATTATTAT+CGG - chr3_2:25131109-25131128 None:intergenic 15.0%
!!! GTTTGTTTTAAATTTAATTC+TGG + chr3_2:25132384-25132403 Msa0400650:intron 15.0%
!! ATCTTAATTTACACTTAAAA+AGG - chr3_2:25132978-25132997 None:intergenic 15.0%
!!! TATATCCCATCTTTTAAAAA+GGG - chr3_2:25129654-25129673 None:intergenic 20.0%
!!! ATATATCCCATCTTTTAAAA+AGG - chr3_2:25129655-25129674 None:intergenic 20.0%
!!! TATTTGAAAACAGTTTTACT+TGG + chr3_2:25130122-25130141 Msa0400650:five_prime_UTR 20.0%
!! AAATATTATGTGTGAACAAT+TGG - chr3_2:25131328-25131347 None:intergenic 20.0%
!! AAAGCAAAATATTGTTTAGT+AGG - chr3_2:25131526-25131545 None:intergenic 20.0%
!! CTCTCAATAAATATGTATAA+GGG - chr3_2:25132173-25132192 None:intergenic 20.0%
!! TCTCTCAATAAATATGTATA+AGG - chr3_2:25132174-25132193 None:intergenic 20.0%
!! GGGATGATAATTATTATAAA+CGG - chr3_2:25132479-25132498 None:intergenic 20.0%
!!! TATATCCCATCTTTTAAAAA+GGG - chr3_2:25129654-25129673 None:intergenic 20.0%
!!! ATATATCCCATCTTTTAAAA+AGG - chr3_2:25129655-25129674 None:intergenic 20.0%
!!! TATTTGAAAACAGTTTTACT+TGG + chr3_2:25130122-25130141 Msa0400650:five_prime_UTR 20.0%
!! AAATATTATGTGTGAACAAT+TGG - chr3_2:25131328-25131347 None:intergenic 20.0%
!! AAAGCAAAATATTGTTTAGT+AGG - chr3_2:25131526-25131545 None:intergenic 20.0%
!! CTCTCAATAAATATGTATAA+GGG - chr3_2:25132173-25132192 None:intergenic 20.0%
!! TCTCTCAATAAATATGTATA+AGG - chr3_2:25132174-25132193 None:intergenic 20.0%
!! GGGATGATAATTATTATAAA+CGG - chr3_2:25132479-25132498 None:intergenic 20.0%
!! TTTTGTTCTTTTATGGTTTC+TGG + chr3_2:25129284-25129303 Msa0400650:five_prime_UTR 25.0%
!! TGATTTTCTTAAATCCATGA+TGG + chr3_2:25129332-25129351 Msa0400650:five_prime_UTR 25.0%
!!! AATAGTTCTGATTTATTGTG+AGG + chr3_2:25129367-25129386 Msa0400650:five_prime_UTR 25.0%
!!! AACGTTTCATATTTTAAGCT+CGG - chr3_2:25129524-25129543 None:intergenic 25.0%
!!! TCCATTGATGTTTTAGTATT+TGG + chr3_2:25129609-25129628 Msa0400650:five_prime_UTR 25.0%
! ACCAAATACTAAAACATCAA+TGG - chr3_2:25129613-25129632 None:intergenic 25.0%
!!! ATATCCCATCTTTTAAAAAG+GGG - chr3_2:25129653-25129672 None:intergenic 25.0%
!! TTTTTCCGATTCTCATATTT+AGG + chr3_2:25129725-25129744 Msa0400650:five_prime_UTR 25.0%
!! TTTTCCGATTCTCATATTTA+GGG + chr3_2:25129726-25129745 Msa0400650:five_prime_UTR 25.0%
!! TGACATCTATTTGAAATGAT+TGG + chr3_2:25129788-25129807 Msa0400650:five_prime_UTR 25.0%
! ATAGATAAACTCAAAGAAGT+CGG - chr3_2:25129978-25129997 None:intergenic 25.0%
! TCAGATTCTTATATGAAAAG+TGG + chr3_2:25130189-25130208 Msa0400650:CDS 25.0%
! ATAAATCCATCCTTTAACAA+AGG - chr3_2:25130717-25130736 None:intergenic 25.0%
! GATTTATATCCTATAATTCG+AGG + chr3_2:25130730-25130749 Msa0400650:CDS 25.0%
!!! TATTATTCTTTTGAAGTTGC+TGG + chr3_2:25130795-25130814 Msa0400650:CDS 25.0%
! TGTACTCAGAACAATATAAA+TGG + chr3_2:25130859-25130878 Msa0400650:CDS 25.0%
! AGAACAATATAAATGGCTAA+AGG + chr3_2:25130866-25130885 Msa0400650:CDS 25.0%
! TATTTATAACCTATGAAGCA+CGG - chr3_2:25131223-25131242 None:intergenic 25.0%
! GTTATAAATAACTGTGAATG+TGG + chr3_2:25131233-25131252 Msa0400650:intron 25.0%
!!! TTTTTTCACTTCTTGTTGTA+AGG - chr3_2:25131270-25131289 None:intergenic 25.0%
!!! TCTGTTTCTACTAAACTTTT+AGG + chr3_2:25131451-25131470 Msa0400650:intron 25.0%
! CAAAATATTGTTTAGTAGGA+TGG - chr3_2:25131522-25131541 None:intergenic 25.0%
!! ATATTTTGCTTTAGCAGTTT+TGG + chr3_2:25131534-25131553 Msa0400650:intron 25.0%
!! TATTTTGCTTTAGCAGTTTT+GGG + chr3_2:25131535-25131554 Msa0400650:intron 25.0%
! TCAGATTGTATATAAGTGAA+AGG + chr3_2:25131705-25131724 Msa0400650:intron 25.0%
! AAAAGTTAGAACTTTCAGAA+AGG - chr3_2:25131800-25131819 None:intergenic 25.0%
!!! TAACTTTTCTGTTTCTCATT+AGG + chr3_2:25131812-25131831 Msa0400650:intron 25.0%
!!! AACTTTTCTGTTTCTCATTA+GGG + chr3_2:25131813-25131832 Msa0400650:intron 25.0%
! ATACATTCATATGAAAACCT+AGG + chr3_2:25131883-25131902 Msa0400650:intron 25.0%
! TCTAAATGTTTGTCATTCAT+TGG - chr3_2:25131934-25131953 None:intergenic 25.0%
! TCAATAAATATGTATAAGGG+AGG - chr3_2:25132170-25132189 None:intergenic 25.0%
! ATACATATTTATTGAGAGAG+AGG + chr3_2:25132175-25132194 Msa0400650:intron 25.0%
!!! AACTCTGAAGTTATTATAGT+AGG + chr3_2:25132208-25132227 Msa0400650:intron 25.0%
! AAAAAAAGACTGTGTTGTAA+GGG + chr3_2:25132407-25132426 Msa0400650:intron 25.0%
!! ACGTGTATATAATGGAAAAT+TGG + chr3_2:25132804-25132823 Msa0400650:CDS 25.0%
! TTACACTTAAAAAGGAATAG+AGG - chr3_2:25132970-25132989 None:intergenic 25.0%
! TATACTATTCTTACCATGTT+TGG + chr3_2:25133003-25133022 Msa0400650:intron 25.0%
!! TTTTGTTCTTTTATGGTTTC+TGG + chr3_2:25129284-25129303 Msa0400650:five_prime_UTR 25.0%
!! TGATTTTCTTAAATCCATGA+TGG + chr3_2:25129332-25129351 Msa0400650:five_prime_UTR 25.0%
!!! AATAGTTCTGATTTATTGTG+AGG + chr3_2:25129367-25129386 Msa0400650:five_prime_UTR 25.0%
!!! AACGTTTCATATTTTAAGCT+CGG - chr3_2:25129524-25129543 None:intergenic 25.0%
!!! TCCATTGATGTTTTAGTATT+TGG + chr3_2:25129609-25129628 Msa0400650:five_prime_UTR 25.0%
! ACCAAATACTAAAACATCAA+TGG - chr3_2:25129613-25129632 None:intergenic 25.0%
!!! ATATCCCATCTTTTAAAAAG+GGG - chr3_2:25129653-25129672 None:intergenic 25.0%
!! TTTTTCCGATTCTCATATTT+AGG + chr3_2:25129725-25129744 Msa0400650:five_prime_UTR 25.0%
!! TTTTCCGATTCTCATATTTA+GGG + chr3_2:25129726-25129745 Msa0400650:five_prime_UTR 25.0%
!! TGACATCTATTTGAAATGAT+TGG + chr3_2:25129788-25129807 Msa0400650:five_prime_UTR 25.0%
! ATAGATAAACTCAAAGAAGT+CGG - chr3_2:25129978-25129997 None:intergenic 25.0%
! TCAGATTCTTATATGAAAAG+TGG + chr3_2:25130189-25130208 Msa0400650:CDS 25.0%
! ATAAATCCATCCTTTAACAA+AGG - chr3_2:25130717-25130736 None:intergenic 25.0%
! GATTTATATCCTATAATTCG+AGG + chr3_2:25130730-25130749 Msa0400650:CDS 25.0%
!!! TATTATTCTTTTGAAGTTGC+TGG + chr3_2:25130795-25130814 Msa0400650:CDS 25.0%
! TGTACTCAGAACAATATAAA+TGG + chr3_2:25130859-25130878 Msa0400650:CDS 25.0%
! AGAACAATATAAATGGCTAA+AGG + chr3_2:25130866-25130885 Msa0400650:CDS 25.0%
! TATTTATAACCTATGAAGCA+CGG - chr3_2:25131223-25131242 None:intergenic 25.0%
! GTTATAAATAACTGTGAATG+TGG + chr3_2:25131233-25131252 Msa0400650:intron 25.0%
!!! TTTTTTCACTTCTTGTTGTA+AGG - chr3_2:25131270-25131289 None:intergenic 25.0%
!!! TCTGTTTCTACTAAACTTTT+AGG + chr3_2:25131451-25131470 Msa0400650:intron 25.0%
! CAAAATATTGTTTAGTAGGA+TGG - chr3_2:25131522-25131541 None:intergenic 25.0%
!! ATATTTTGCTTTAGCAGTTT+TGG + chr3_2:25131534-25131553 Msa0400650:intron 25.0%
!! TATTTTGCTTTAGCAGTTTT+GGG + chr3_2:25131535-25131554 Msa0400650:intron 25.0%
! TCAGATTGTATATAAGTGAA+AGG + chr3_2:25131705-25131724 Msa0400650:intron 25.0%
! AAAAGTTAGAACTTTCAGAA+AGG - chr3_2:25131800-25131819 None:intergenic 25.0%
!!! TAACTTTTCTGTTTCTCATT+AGG + chr3_2:25131812-25131831 Msa0400650:intron 25.0%
!!! AACTTTTCTGTTTCTCATTA+GGG + chr3_2:25131813-25131832 Msa0400650:intron 25.0%
! ATACATTCATATGAAAACCT+AGG + chr3_2:25131883-25131902 Msa0400650:intron 25.0%
! TCTAAATGTTTGTCATTCAT+TGG - chr3_2:25131934-25131953 None:intergenic 25.0%
! TCAATAAATATGTATAAGGG+AGG - chr3_2:25132170-25132189 None:intergenic 25.0%
! ATACATATTTATTGAGAGAG+AGG + chr3_2:25132175-25132194 Msa0400650:intron 25.0%
!!! AACTCTGAAGTTATTATAGT+AGG + chr3_2:25132208-25132227 Msa0400650:intron 25.0%
! AAAAAAAGACTGTGTTGTAA+GGG + chr3_2:25132407-25132426 Msa0400650:intron 25.0%
!! ACGTGTATATAATGGAAAAT+TGG + chr3_2:25132804-25132823 Msa0400650:CDS 25.0%
! TTACACTTAAAAAGGAATAG+AGG - chr3_2:25132970-25132989 None:intergenic 25.0%
! TATACTATTCTTACCATGTT+TGG + chr3_2:25133003-25133022 Msa0400650:intron 25.0%
ATTGCACTAAATGATCTATG+AGG - chr3_2:25129258-25129277 None:intergenic 30.0%
AGATCAGACGACTTATATTT+AGG + chr3_2:25129476-25129495 Msa0400650:five_prime_UTR 30.0%
CTTATGAAGTTATGAATGTG+TGG + chr3_2:25129567-25129586 Msa0400650:five_prime_UTR 30.0%
!! ATTGTCCCCTTTTTAAAAGA+TGG + chr3_2:25129645-25129664 Msa0400650:five_prime_UTR 30.0%
!! TTGTCCCCTTTTTAAAAGAT+GGG + chr3_2:25129646-25129665 Msa0400650:five_prime_UTR 30.0%
AAGTATTATAGACTTGTGTC+TGG + chr3_2:25129675-25129694 Msa0400650:five_prime_UTR 30.0%
ATGAGAATCGGAAAAATTAG+AGG - chr3_2:25129721-25129740 None:intergenic 30.0%
TCATCCCTAAATATGAGAAT+CGG - chr3_2:25129733-25129752 None:intergenic 30.0%
!!! TAGTACTAGTTAGTTTTCTG+AGG - chr3_2:25129868-25129887 None:intergenic 30.0%
!!! GCTGTTTTTATAAACTATCG+TGG - chr3_2:25130094-25130113 None:intergenic 30.0%
TTATATGAAAAGTGGAATCC+AGG + chr3_2:25130197-25130216 Msa0400650:CDS 30.0%
GTAGAAAATGTAACTGTAAG+AGG - chr3_2:25130352-25130371 None:intergenic 30.0%
CGGTAAAAGTAAACAGAATT+CGG - chr3_2:25130417-25130436 None:intergenic 30.0%
! GATGTGATCTAATGTTGATT+TGG - chr3_2:25130538-25130557 None:intergenic 30.0%
AGAGCATATACCTTTGTTAA+AGG + chr3_2:25130704-25130723 Msa0400650:CDS 30.0%
CATATACCTTTGTTAAAGGA+TGG + chr3_2:25130708-25130727 Msa0400650:CDS 30.0%
TTATATCCTATAATTCGAGG+TGG + chr3_2:25130733-25130752 Msa0400650:CDS 30.0%
ATAAATGGCTAAAGGTTAGT+TGG + chr3_2:25130874-25130893 Msa0400650:intron 30.0%
TTTCCAATTAAAGTATGTCG+TGG + chr3_2:25130968-25130987 Msa0400650:intron 30.0%
TTACATGATATTCACCAAAC+TGG + chr3_2:25131017-25131036 Msa0400650:intron 30.0%
TTCATAGTTTATAGCCAGTT+TGG - chr3_2:25131034-25131053 None:intergenic 30.0%
TCTCAAATTATTATCGGTGT+CGG - chr3_2:25131103-25131122 None:intergenic 30.0%
TATTATGTGTGAACAATTGG+AGG - chr3_2:25131325-25131344 None:intergenic 30.0%
ACTAGAAACAGTTGCATTTA+TGG - chr3_2:25131362-25131381 None:intergenic 30.0%
!!! TTTAGCAGTTTTGGGATTAT+TGG + chr3_2:25131543-25131562 Msa0400650:intron 30.0%
! GAATTAGTTGGAGATTAGTT+TGG + chr3_2:25131607-25131626 Msa0400650:intron 30.0%
TTGTTCTATGCTAACTACTA+TGG - chr3_2:25131681-25131700 None:intergenic 30.0%
TTGGTTACAATGCAAGTAAT+GGG - chr3_2:25131915-25131934 None:intergenic 30.0%
ATTGGTTACAATGCAAGTAA+TGG - chr3_2:25131916-25131935 None:intergenic 30.0%
TTGCACTTCATCATTATCAA+GGG - chr3_2:25131993-25132012 None:intergenic 30.0%
TTTGCACTTCATCATTATCA+AGG - chr3_2:25131994-25132013 None:intergenic 30.0%
!!! GGCTTCTATTTTTATGTATG+TGG - chr3_2:25132066-25132085 None:intergenic 30.0%
ATGCATGCATATCTTTATGA+AGG - chr3_2:25132087-25132106 None:intergenic 30.0%
CAAAAGAAAAATGAACAGAC+GGG - chr3_2:25132263-25132282 None:intergenic 30.0%
GCAAAAGAAAAATGAACAGA+CGG - chr3_2:25132264-25132283 None:intergenic 30.0%
GAAAAAAAGACTGTGTTGTA+AGG + chr3_2:25132406-25132425 Msa0400650:intron 30.0%
! TCAACAAGAACTACTAGTTT+CGG - chr3_2:25132445-25132464 None:intergenic 30.0%
GATCACAACGAAGATATAAA+GGG - chr3_2:25132499-25132518 None:intergenic 30.0%
AGATCACAACGAAGATATAA+AGG - chr3_2:25132500-25132519 None:intergenic 30.0%
TGACAGAAACGTGTATATAA+TGG + chr3_2:25132796-25132815 Msa0400650:intron 30.0%
ATCTATATACCTACCAAACA+TGG - chr3_2:25133019-25133038 None:intergenic 30.0%
! CAGATATCATCAGATTTTAC+CGG - chr3_2:25133153-25133172 None:intergenic 30.0%
ATTGCACTAAATGATCTATG+AGG - chr3_2:25129258-25129277 None:intergenic 30.0%
AGATCAGACGACTTATATTT+AGG + chr3_2:25129476-25129495 Msa0400650:five_prime_UTR 30.0%
CTTATGAAGTTATGAATGTG+TGG + chr3_2:25129567-25129586 Msa0400650:five_prime_UTR 30.0%
!! ATTGTCCCCTTTTTAAAAGA+TGG + chr3_2:25129645-25129664 Msa0400650:five_prime_UTR 30.0%
!! TTGTCCCCTTTTTAAAAGAT+GGG + chr3_2:25129646-25129665 Msa0400650:five_prime_UTR 30.0%
AAGTATTATAGACTTGTGTC+TGG + chr3_2:25129675-25129694 Msa0400650:five_prime_UTR 30.0%
ATGAGAATCGGAAAAATTAG+AGG - chr3_2:25129721-25129740 None:intergenic 30.0%
TCATCCCTAAATATGAGAAT+CGG - chr3_2:25129733-25129752 None:intergenic 30.0%
!!! TAGTACTAGTTAGTTTTCTG+AGG - chr3_2:25129868-25129887 None:intergenic 30.0%
!!! GCTGTTTTTATAAACTATCG+TGG - chr3_2:25130094-25130113 None:intergenic 30.0%
TTATATGAAAAGTGGAATCC+AGG + chr3_2:25130197-25130216 Msa0400650:CDS 30.0%
GTAGAAAATGTAACTGTAAG+AGG - chr3_2:25130352-25130371 None:intergenic 30.0%
CGGTAAAAGTAAACAGAATT+CGG - chr3_2:25130417-25130436 None:intergenic 30.0%
! GATGTGATCTAATGTTGATT+TGG - chr3_2:25130538-25130557 None:intergenic 30.0%
AGAGCATATACCTTTGTTAA+AGG + chr3_2:25130704-25130723 Msa0400650:CDS 30.0%
CATATACCTTTGTTAAAGGA+TGG + chr3_2:25130708-25130727 Msa0400650:CDS 30.0%
TTATATCCTATAATTCGAGG+TGG + chr3_2:25130733-25130752 Msa0400650:CDS 30.0%
ATAAATGGCTAAAGGTTAGT+TGG + chr3_2:25130874-25130893 Msa0400650:intron 30.0%
TTTCCAATTAAAGTATGTCG+TGG + chr3_2:25130968-25130987 Msa0400650:intron 30.0%
TTACATGATATTCACCAAAC+TGG + chr3_2:25131017-25131036 Msa0400650:intron 30.0%
TTCATAGTTTATAGCCAGTT+TGG - chr3_2:25131034-25131053 None:intergenic 30.0%
TCTCAAATTATTATCGGTGT+CGG - chr3_2:25131103-25131122 None:intergenic 30.0%
TATTATGTGTGAACAATTGG+AGG - chr3_2:25131325-25131344 None:intergenic 30.0%
ACTAGAAACAGTTGCATTTA+TGG - chr3_2:25131362-25131381 None:intergenic 30.0%
!!! TTTAGCAGTTTTGGGATTAT+TGG + chr3_2:25131543-25131562 Msa0400650:intron 30.0%
! GAATTAGTTGGAGATTAGTT+TGG + chr3_2:25131607-25131626 Msa0400650:intron 30.0%
TTGTTCTATGCTAACTACTA+TGG - chr3_2:25131681-25131700 None:intergenic 30.0%
TTGGTTACAATGCAAGTAAT+GGG - chr3_2:25131915-25131934 None:intergenic 30.0%
ATTGGTTACAATGCAAGTAA+TGG - chr3_2:25131916-25131935 None:intergenic 30.0%
TTGCACTTCATCATTATCAA+GGG - chr3_2:25131993-25132012 None:intergenic 30.0%
TTTGCACTTCATCATTATCA+AGG - chr3_2:25131994-25132013 None:intergenic 30.0%
!!! GGCTTCTATTTTTATGTATG+TGG - chr3_2:25132066-25132085 None:intergenic 30.0%
ATGCATGCATATCTTTATGA+AGG - chr3_2:25132087-25132106 None:intergenic 30.0%
CAAAAGAAAAATGAACAGAC+GGG - chr3_2:25132263-25132282 None:intergenic 30.0%
GCAAAAGAAAAATGAACAGA+CGG - chr3_2:25132264-25132283 None:intergenic 30.0%
GAAAAAAAGACTGTGTTGTA+AGG + chr3_2:25132406-25132425 Msa0400650:intron 30.0%
! TCAACAAGAACTACTAGTTT+CGG - chr3_2:25132445-25132464 None:intergenic 30.0%
GATCACAACGAAGATATAAA+GGG - chr3_2:25132499-25132518 None:intergenic 30.0%
AGATCACAACGAAGATATAA+AGG - chr3_2:25132500-25132519 None:intergenic 30.0%
TGACAGAAACGTGTATATAA+TGG + chr3_2:25132796-25132815 Msa0400650:intron 30.0%
ATCTATATACCTACCAAACA+TGG - chr3_2:25133019-25133038 None:intergenic 30.0%
! CAGATATCATCAGATTTTAC+CGG - chr3_2:25133153-25133172 None:intergenic 30.0%
GAGAGATTATTACTGTAGCA+AGG - chr3_2:25129312-25129331 None:intergenic 35.0%
!! CTTAAATCCATGATGGATTG+TGG + chr3_2:25129339-25129358 Msa0400650:five_prime_UTR 35.0%
AAGCAGCTTCACTGAAAAAT+TGG - chr3_2:25129395-25129414 None:intergenic 35.0%
!! AATTTTTCAGTGAAGCTGCT+TGG + chr3_2:25129394-25129413 Msa0400650:five_prime_UTR 35.0%
!! AACATCAATGGACTAGACTA+CGG - chr3_2:25129601-25129620 None:intergenic 35.0%
TTAGTATTTGGTTGAGTGTG+TGG + chr3_2:25129621-25129640 Msa0400650:five_prime_UTR 35.0%
TCGGAAAAATTAGAGGTTGA+AGG - chr3_2:25129714-25129733 None:intergenic 35.0%
AGTCTAAAGACGAAAAGTGA+AGG - chr3_2:25129917-25129936 None:intergenic 35.0%
AGACTCTTCAGTCTTTATGT+CGG + chr3_2:25129932-25129951 Msa0400650:five_prime_UTR 35.0%
AGACTGTTTGAGAGAACATA+TGG + chr3_2:25130015-25130034 Msa0400650:five_prime_UTR 35.0%
AATCCAGGTACACATTTCTT+TGG + chr3_2:25130212-25130231 Msa0400650:CDS 35.0%
GTTCCATATTCTACAACTGA+AGG - chr3_2:25130288-25130307 None:intergenic 35.0%
TAGAATATGGAACATTGCCA+GGG + chr3_2:25130295-25130314 Msa0400650:CDS 35.0%
! AGTTACATTTTCTACAGCTC+AGG + chr3_2:25130357-25130376 Msa0400650:CDS 35.0%
AAGATACACCATACGGTAAT+AGG + chr3_2:25130381-25130400 Msa0400650:CDS 35.0%
! TAAACAGAATTCGGCTCTAA+AGG - chr3_2:25130408-25130427 None:intergenic 35.0%
!! TCTGTTTACTTTTACCGATG+CGG + chr3_2:25130420-25130439 Msa0400650:CDS 35.0%
AAACTAATTGGGAATTGAGC+TGG - chr3_2:25130480-25130499 None:intergenic 35.0%
!!! ATTCCCAATTAGTTTTGCTG+TGG + chr3_2:25130485-25130504 Msa0400650:CDS 35.0%
! CATTTTCCACCTCGAATTAT+AGG - chr3_2:25130742-25130761 None:intergenic 35.0%
! AAAATGCCATTTGAGGAAAG+TGG + chr3_2:25130756-25130775 Msa0400650:CDS 35.0%
TACATTCCAGACAAATCGAA+TGG + chr3_2:25130920-25130939 Msa0400650:intron 35.0%
ACATTCCAGACAAATCGAAT+GGG + chr3_2:25130921-25130940 Msa0400650:intron 35.0%
TAGCCACGACATACTTTAAT+TGG - chr3_2:25130974-25130993 None:intergenic 35.0%
CTATAACACGAAACATCACA+AGG - chr3_2:25131422-25131441 None:intergenic 35.0%
CTTGTGATGTTTCGTGTTAT+AGG + chr3_2:25131420-25131439 Msa0400650:intron 35.0%
CACACAACAACTGAATTAGT+TGG + chr3_2:25131595-25131614 Msa0400650:intron 35.0%
TGGTTACAATGCAAGTAATG+GGG - chr3_2:25131914-25131933 None:intergenic 35.0%
! AAAGAAGCAACGGTTATTTC+TGG - chr3_2:25131967-25131986 None:intergenic 35.0%
ATGATGAAGTGCAAAATCCT+TGG + chr3_2:25131999-25132018 Msa0400650:intron 35.0%
GCATGCATTGCATTTACATA+TGG + chr3_2:25132030-25132049 Msa0400650:intron 35.0%
CATTGCATTTACATATGGCT+AGG + chr3_2:25132035-25132054 Msa0400650:intron 35.0%
TGAAATATGACAAGCAACCA+AGG - chr3_2:25132560-25132579 None:intergenic 35.0%
TTGTCATATTTCATGTGCCA+TGG + chr3_2:25132567-25132586 Msa0400650:CDS 35.0%
! GCTGTGTTACTATTATACCA+TGG - chr3_2:25132587-25132606 None:intergenic 35.0%
AATAGTAACACAGCTCATCA+AGG + chr3_2:25132593-25132612 Msa0400650:CDS 35.0%
TGGTGATATGATGAAAACCA+TGG + chr3_2:25132622-25132641 Msa0400650:CDS 35.0%
AATGGAAAATTGGATCCTTG+TGG + chr3_2:25132814-25132833 Msa0400650:CDS 35.0%
GTTCATGTAACAATTGGTGA+TGG + chr3_2:25132841-25132860 Msa0400650:CDS 35.0%
!! ATGTAACAATTGGTGATGGA+GGG + chr3_2:25132845-25132864 Msa0400650:CDS 35.0%
! ATTCAACCGTTCTGTTTTCT+CGG + chr3_2:25132938-25132957 Msa0400650:intron 35.0%
TAGTATCCGAGAAAACAGAA+CGG - chr3_2:25132947-25132966 None:intergenic 35.0%
CTATTCTTACCATGTTTGGT+AGG + chr3_2:25133007-25133026 Msa0400650:intron 35.0%
CGGTAAAATCTGATGATATC+TGG + chr3_2:25133151-25133170 Msa0400650:intron 35.0%
ACAAGATTATCAATTCCCTG+CGG - chr3_2:25133322-25133341 None:intergenic 35.0%
GAGAGATTATTACTGTAGCA+AGG - chr3_2:25129312-25129331 None:intergenic 35.0%
!! CTTAAATCCATGATGGATTG+TGG + chr3_2:25129339-25129358 Msa0400650:five_prime_UTR 35.0%
AAGCAGCTTCACTGAAAAAT+TGG - chr3_2:25129395-25129414 None:intergenic 35.0%
!! AATTTTTCAGTGAAGCTGCT+TGG + chr3_2:25129394-25129413 Msa0400650:five_prime_UTR 35.0%
!! AACATCAATGGACTAGACTA+CGG - chr3_2:25129601-25129620 None:intergenic 35.0%
TTAGTATTTGGTTGAGTGTG+TGG + chr3_2:25129621-25129640 Msa0400650:five_prime_UTR 35.0%
TCGGAAAAATTAGAGGTTGA+AGG - chr3_2:25129714-25129733 None:intergenic 35.0%
AGTCTAAAGACGAAAAGTGA+AGG - chr3_2:25129917-25129936 None:intergenic 35.0%
AGACTCTTCAGTCTTTATGT+CGG + chr3_2:25129932-25129951 Msa0400650:five_prime_UTR 35.0%
AGACTGTTTGAGAGAACATA+TGG + chr3_2:25130015-25130034 Msa0400650:five_prime_UTR 35.0%
AATCCAGGTACACATTTCTT+TGG + chr3_2:25130212-25130231 Msa0400650:CDS 35.0%
GTTCCATATTCTACAACTGA+AGG - chr3_2:25130288-25130307 None:intergenic 35.0%
TAGAATATGGAACATTGCCA+GGG + chr3_2:25130295-25130314 Msa0400650:CDS 35.0%
! AGTTACATTTTCTACAGCTC+AGG + chr3_2:25130357-25130376 Msa0400650:CDS 35.0%
AAGATACACCATACGGTAAT+AGG + chr3_2:25130381-25130400 Msa0400650:CDS 35.0%
! TAAACAGAATTCGGCTCTAA+AGG - chr3_2:25130408-25130427 None:intergenic 35.0%
!! TCTGTTTACTTTTACCGATG+CGG + chr3_2:25130420-25130439 Msa0400650:CDS 35.0%
AAACTAATTGGGAATTGAGC+TGG - chr3_2:25130480-25130499 None:intergenic 35.0%
!!! ATTCCCAATTAGTTTTGCTG+TGG + chr3_2:25130485-25130504 Msa0400650:CDS 35.0%
! CATTTTCCACCTCGAATTAT+AGG - chr3_2:25130742-25130761 None:intergenic 35.0%
! AAAATGCCATTTGAGGAAAG+TGG + chr3_2:25130756-25130775 Msa0400650:CDS 35.0%
TACATTCCAGACAAATCGAA+TGG + chr3_2:25130920-25130939 Msa0400650:intron 35.0%
ACATTCCAGACAAATCGAAT+GGG + chr3_2:25130921-25130940 Msa0400650:intron 35.0%
TAGCCACGACATACTTTAAT+TGG - chr3_2:25130974-25130993 None:intergenic 35.0%
CTATAACACGAAACATCACA+AGG - chr3_2:25131422-25131441 None:intergenic 35.0%
CTTGTGATGTTTCGTGTTAT+AGG + chr3_2:25131420-25131439 Msa0400650:intron 35.0%
CACACAACAACTGAATTAGT+TGG + chr3_2:25131595-25131614 Msa0400650:intron 35.0%
TGGTTACAATGCAAGTAATG+GGG - chr3_2:25131914-25131933 None:intergenic 35.0%
! AAAGAAGCAACGGTTATTTC+TGG - chr3_2:25131967-25131986 None:intergenic 35.0%
ATGATGAAGTGCAAAATCCT+TGG + chr3_2:25131999-25132018 Msa0400650:intron 35.0%
GCATGCATTGCATTTACATA+TGG + chr3_2:25132030-25132049 Msa0400650:intron 35.0%
CATTGCATTTACATATGGCT+AGG + chr3_2:25132035-25132054 Msa0400650:intron 35.0%
TGAAATATGACAAGCAACCA+AGG - chr3_2:25132560-25132579 None:intergenic 35.0%
TTGTCATATTTCATGTGCCA+TGG + chr3_2:25132567-25132586 Msa0400650:CDS 35.0%
! GCTGTGTTACTATTATACCA+TGG - chr3_2:25132587-25132606 None:intergenic 35.0%
AATAGTAACACAGCTCATCA+AGG + chr3_2:25132593-25132612 Msa0400650:CDS 35.0%
TGGTGATATGATGAAAACCA+TGG + chr3_2:25132622-25132641 Msa0400650:CDS 35.0%
AATGGAAAATTGGATCCTTG+TGG + chr3_2:25132814-25132833 Msa0400650:CDS 35.0%
GTTCATGTAACAATTGGTGA+TGG + chr3_2:25132841-25132860 Msa0400650:CDS 35.0%
!! ATGTAACAATTGGTGATGGA+GGG + chr3_2:25132845-25132864 Msa0400650:CDS 35.0%
! ATTCAACCGTTCTGTTTTCT+CGG + chr3_2:25132938-25132957 Msa0400650:intron 35.0%
TAGTATCCGAGAAAACAGAA+CGG - chr3_2:25132947-25132966 None:intergenic 35.0%
CTATTCTTACCATGTTTGGT+AGG + chr3_2:25133007-25133026 Msa0400650:intron 35.0%
CGGTAAAATCTGATGATATC+TGG + chr3_2:25133151-25133170 Msa0400650:intron 35.0%
ACAAGATTATCAATTCCCTG+CGG - chr3_2:25133322-25133341 None:intergenic 35.0%
GTTCTCTCAAACAGTCTCAT+AGG - chr3_2:25130012-25130031 None:intergenic 40.0%
GAGCTTATGGAAATAAGCTG+AGG - chr3_2:25130070-25130089 None:intergenic 40.0%
AAACTATCGTGGAGAGCTTA+TGG - chr3_2:25130083-25130102 None:intergenic 40.0%
AGATTTGTCATCAGTAACCC+AGG - chr3_2:25130262-25130281 None:intergenic 40.0%
GCACCTTCAGTTGTAGAATA+TGG + chr3_2:25130282-25130301 Msa0400650:CDS 40.0%
GTAGAATATGGAACATTGCC+AGG + chr3_2:25130294-25130313 Msa0400650:CDS 40.0%
CTCAGGAAAGATACACCATA+CGG + chr3_2:25130374-25130393 Msa0400650:CDS 40.0%
CTAAAGGACCTATTACCGTA+TGG - chr3_2:25130392-25130411 None:intergenic 40.0%
CGACCACAGCAAAACTAATT+GGG - chr3_2:25130491-25130510 None:intergenic 40.0%
!!! CCAATTAGTTTTGCTGTGGT+CGG + chr3_2:25130489-25130508 Msa0400650:CDS 40.0%
!! TTGATTTGGTCCAACCAGTT+TGG - chr3_2:25130524-25130543 None:intergenic 40.0%
GGTTAACATCGTATCTGCAT+TGG - chr3_2:25130563-25130582 None:intergenic 40.0%
TACGATGTTAACCTGATTCC+TGG + chr3_2:25130570-25130589 Msa0400650:CDS 40.0%
GTATATAGTCGGCATACGAA+AGG - chr3_2:25130599-25130618 None:intergenic 40.0%
CCAACGATGCTGTATATAGT+CGG - chr3_2:25130610-25130629 None:intergenic 40.0%
CGACTATATACAGCATCGTT+GGG + chr3_2:25130608-25130627 Msa0400650:CDS 40.0%
CTTGATCCACTTTCCTCAAA+TGG - chr3_2:25130765-25130784 None:intergenic 40.0%
! TAAAGCCCATTCGATTTGTC+TGG - chr3_2:25130929-25130948 None:intergenic 40.0%
!! ATTGGAGGCATCAAGAAAAC+AGG - chr3_2:25131310-25131329 None:intergenic 40.0%
AACAGTTGCATTTATGGCAG+TGG - chr3_2:25131356-25131375 None:intergenic 40.0%
ACGAAACATCACAAGGTTCA+TGG - chr3_2:25131415-25131434 None:intergenic 40.0%
GGTTACAATGCAAGTAATGG+GGG - chr3_2:25131913-25131932 None:intergenic 40.0%
TCAAGGGAAGAAAGAAGCAA+CGG - chr3_2:25131977-25131996 None:intergenic 40.0%
TCTTCGTTGTGATCTACAGA+TGG + chr3_2:25132505-25132524 Msa0400650:intron 40.0%
TCTACAGATGGATCTGTCAA+AGG + chr3_2:25132517-25132536 Msa0400650:intron 40.0%
!!! AGCGTCGATTTAGTTTTTGC+AGG + chr3_2:25132665-25132684 Msa0400650:CDS 40.0%
!! GGTGCTGTTCATGTAACAAT+TGG + chr3_2:25132835-25132854 Msa0400650:CDS 40.0%
!! CATGTAACAATTGGTGATGG+AGG + chr3_2:25132844-25132863 Msa0400650:CDS 40.0%
! GAATTCCGTGAAGCAAGTTT+TGG + chr3_2:25133057-25133076 Msa0400650:CDS 40.0%
! CATGACCAAAACTTGCTTCA+CGG - chr3_2:25133065-25133084 None:intergenic 40.0%
TAAACTCAACACATGCCTTC+TGG + chr3_2:25133100-25133119 Msa0400650:CDS 40.0%
TTAACCTCTTTAGACAGCTC+AGG + chr3_2:25133174-25133193 Msa0400650:intron 40.0%
GTTCTCTCAAACAGTCTCAT+AGG - chr3_2:25130012-25130031 None:intergenic 40.0%
GAGCTTATGGAAATAAGCTG+AGG - chr3_2:25130070-25130089 None:intergenic 40.0%
AAACTATCGTGGAGAGCTTA+TGG - chr3_2:25130083-25130102 None:intergenic 40.0%
AGATTTGTCATCAGTAACCC+AGG - chr3_2:25130262-25130281 None:intergenic 40.0%
GCACCTTCAGTTGTAGAATA+TGG + chr3_2:25130282-25130301 Msa0400650:CDS 40.0%
GTAGAATATGGAACATTGCC+AGG + chr3_2:25130294-25130313 Msa0400650:CDS 40.0%
CTCAGGAAAGATACACCATA+CGG + chr3_2:25130374-25130393 Msa0400650:CDS 40.0%
CTAAAGGACCTATTACCGTA+TGG - chr3_2:25130392-25130411 None:intergenic 40.0%
CGACCACAGCAAAACTAATT+GGG - chr3_2:25130491-25130510 None:intergenic 40.0%
!!! CCAATTAGTTTTGCTGTGGT+CGG + chr3_2:25130489-25130508 Msa0400650:CDS 40.0%
!! TTGATTTGGTCCAACCAGTT+TGG - chr3_2:25130524-25130543 None:intergenic 40.0%
GGTTAACATCGTATCTGCAT+TGG - chr3_2:25130563-25130582 None:intergenic 40.0%
TACGATGTTAACCTGATTCC+TGG + chr3_2:25130570-25130589 Msa0400650:CDS 40.0%
GTATATAGTCGGCATACGAA+AGG - chr3_2:25130599-25130618 None:intergenic 40.0%
CCAACGATGCTGTATATAGT+CGG - chr3_2:25130610-25130629 None:intergenic 40.0%
CGACTATATACAGCATCGTT+GGG + chr3_2:25130608-25130627 Msa0400650:CDS 40.0%
CTTGATCCACTTTCCTCAAA+TGG - chr3_2:25130765-25130784 None:intergenic 40.0%
! TAAAGCCCATTCGATTTGTC+TGG - chr3_2:25130929-25130948 None:intergenic 40.0%
!! ATTGGAGGCATCAAGAAAAC+AGG - chr3_2:25131310-25131329 None:intergenic 40.0%
AACAGTTGCATTTATGGCAG+TGG - chr3_2:25131356-25131375 None:intergenic 40.0%
ACGAAACATCACAAGGTTCA+TGG - chr3_2:25131415-25131434 None:intergenic 40.0%
GGTTACAATGCAAGTAATGG+GGG - chr3_2:25131913-25131932 None:intergenic 40.0%
TCAAGGGAAGAAAGAAGCAA+CGG - chr3_2:25131977-25131996 None:intergenic 40.0%
TCTTCGTTGTGATCTACAGA+TGG + chr3_2:25132505-25132524 Msa0400650:intron 40.0%
TCTACAGATGGATCTGTCAA+AGG + chr3_2:25132517-25132536 Msa0400650:intron 40.0%
!!! AGCGTCGATTTAGTTTTTGC+AGG + chr3_2:25132665-25132684 Msa0400650:CDS 40.0%
!! GGTGCTGTTCATGTAACAAT+TGG + chr3_2:25132835-25132854 Msa0400650:CDS 40.0%
!! CATGTAACAATTGGTGATGG+AGG + chr3_2:25132844-25132863 Msa0400650:CDS 40.0%
! GAATTCCGTGAAGCAAGTTT+TGG + chr3_2:25133057-25133076 Msa0400650:CDS 40.0%
! CATGACCAAAACTTGCTTCA+CGG - chr3_2:25133065-25133084 None:intergenic 40.0%
TAAACTCAACACATGCCTTC+TGG + chr3_2:25133100-25133119 Msa0400650:CDS 40.0%
TTAACCTCTTTAGACAGCTC+AGG + chr3_2:25133174-25133193 Msa0400650:intron 40.0%
TTAGCGACCACAATCCATCA+TGG - chr3_2:25129349-25129368 None:intergenic 45.0%
GTGAAGCTGCTTGGTTGATT+CGG + chr3_2:25129403-25129422 Msa0400650:five_prime_UTR 45.0%
! TGAAGCTGCTTGGTTGATTC+GGG + chr3_2:25129404-25129423 Msa0400650:five_prime_UTR 45.0%
!! TGCTTGGTTGATTCGGGAAA+TGG + chr3_2:25129410-25129429 Msa0400650:five_prime_UTR 45.0%
CTGCAGTCAATCACAATTGC+TGG + chr3_2:25129449-25129468 Msa0400650:five_prime_UTR 45.0%
TCAAAGAAGTCGGTCCAAAC+AGG - chr3_2:25129968-25129987 None:intergenic 45.0%
ATAAGCTGAGGACAGCTTCT+AGG - chr3_2:25130058-25130077 None:intergenic 45.0%
CTGCCAAAGAAATGTGTACC+TGG - chr3_2:25130218-25130237 None:intergenic 45.0%
CAGGTACACATTTCTTTGGC+AGG + chr3_2:25130216-25130235 Msa0400650:CDS 45.0%
! ATTGCCAGGGAAGTATGACT+CGG + chr3_2:25130308-25130327 Msa0400650:CDS 45.0%
!! AAGTATGACTCGGTAGCTGA+AGG + chr3_2:25130318-25130337 Msa0400650:CDS 45.0%
!! GTTTACTTTTACCGATGCGG+TGG + chr3_2:25130423-25130442 Msa0400650:CDS 45.0%
CTAATTGGGAATTGAGCTGG+TGG - chr3_2:25130477-25130496 None:intergenic 45.0%
CCGACCACAGCAAAACTAAT+TGG - chr3_2:25130492-25130511 None:intergenic 45.0%
CCGACTATATACAGCATCGT+TGG + chr3_2:25130607-25130626 Msa0400650:CDS 45.0%
! CATGGTCTAGAACTAGCAAG+TGG - chr3_2:25130657-25130676 None:intergenic 45.0%
!! CACTTGCTAGTTCTAGACCA+TGG + chr3_2:25130655-25130674 Msa0400650:CDS 45.0%
!! TGCTAGTTCTAGACCATGGA+TGG + chr3_2:25130659-25130678 Msa0400650:CDS 45.0%
AGACCATGGATGGTAACACA+AGG + chr3_2:25130669-25130688 Msa0400650:CDS 45.0%
GACCATGGATGGTAACACAA+GGG + chr3_2:25130670-25130689 Msa0400650:CDS 45.0%
TTCCCTTGTGTTACCATCCA+TGG - chr3_2:25130675-25130694 None:intergenic 45.0%
! GAGGTGGAAAATGCCATTTG+AGG + chr3_2:25130749-25130768 Msa0400650:CDS 45.0%
GGTGCTCACATTATCATGCT+TGG + chr3_2:25130816-25130835 Msa0400650:CDS 45.0%
TATGAACACCGACAGAGACA+TGG + chr3_2:25131048-25131067 Msa0400650:intron 45.0%
TTCCTCGATTAGGTGTATCC+CGG - chr3_2:25131197-25131216 None:intergenic 45.0%
GATAATTCCGTAAAGCAGCG+CGG - chr3_2:25131849-25131868 None:intergenic 45.0%
AATGCATGCATCTCTCACCA+AGG - chr3_2:25132019-25132038 None:intergenic 45.0%
ACAGATGGATCTGTCAAAGG+TGG + chr3_2:25132520-25132539 Msa0400650:intron 45.0%
TGTCAAAGGTGGACAGGAAA+AGG + chr3_2:25132531-25132550 Msa0400650:CDS 45.0%
AACACAGCTCATCAAGGTGA+AGG + chr3_2:25132599-25132618 Msa0400650:CDS 45.0%
AGCATAAAGCAATGGCTCCA+TGG - chr3_2:25132642-25132661 None:intergenic 45.0%
ACGCTAGCAGCATAAAGCAA+TGG - chr3_2:25132650-25132669 None:intergenic 45.0%
GTTACATGAACAGCACCACA+AGG - chr3_2:25132832-25132851 None:intergenic 45.0%
TGGAGGGAACAAAGAAGGAT+TGG + chr3_2:25132861-25132880 Msa0400650:CDS 45.0%
ATATAGATCCACCGCCAAAG+TGG + chr3_2:25133031-25133050 Msa0400650:CDS 45.0%
TCACGGAATTCTGACCACTT+TGG - chr3_2:25133048-25133067 None:intergenic 45.0%
!! CGTGAAGCAAGTTTTGGTCA+TGG + chr3_2:25133063-25133082 Msa0400650:CDS 45.0%
ACATCCTGAGCTGTCTAAAG+AGG - chr3_2:25133181-25133200 None:intergenic 45.0%
TTAGCGACCACAATCCATCA+TGG - chr3_2:25129349-25129368 None:intergenic 45.0%
GTGAAGCTGCTTGGTTGATT+CGG + chr3_2:25129403-25129422 Msa0400650:five_prime_UTR 45.0%
! TGAAGCTGCTTGGTTGATTC+GGG + chr3_2:25129404-25129423 Msa0400650:five_prime_UTR 45.0%
!! TGCTTGGTTGATTCGGGAAA+TGG + chr3_2:25129410-25129429 Msa0400650:five_prime_UTR 45.0%
CTGCAGTCAATCACAATTGC+TGG + chr3_2:25129449-25129468 Msa0400650:five_prime_UTR 45.0%
TCAAAGAAGTCGGTCCAAAC+AGG - chr3_2:25129968-25129987 None:intergenic 45.0%
ATAAGCTGAGGACAGCTTCT+AGG - chr3_2:25130058-25130077 None:intergenic 45.0%
CTGCCAAAGAAATGTGTACC+TGG - chr3_2:25130218-25130237 None:intergenic 45.0%
CAGGTACACATTTCTTTGGC+AGG + chr3_2:25130216-25130235 Msa0400650:CDS 45.0%
! ATTGCCAGGGAAGTATGACT+CGG + chr3_2:25130308-25130327 Msa0400650:CDS 45.0%
!! AAGTATGACTCGGTAGCTGA+AGG + chr3_2:25130318-25130337 Msa0400650:CDS 45.0%
!! GTTTACTTTTACCGATGCGG+TGG + chr3_2:25130423-25130442 Msa0400650:CDS 45.0%
CTAATTGGGAATTGAGCTGG+TGG - chr3_2:25130477-25130496 None:intergenic 45.0%
CCGACCACAGCAAAACTAAT+TGG - chr3_2:25130492-25130511 None:intergenic 45.0%
CCGACTATATACAGCATCGT+TGG + chr3_2:25130607-25130626 Msa0400650:CDS 45.0%
! CATGGTCTAGAACTAGCAAG+TGG - chr3_2:25130657-25130676 None:intergenic 45.0%
!! CACTTGCTAGTTCTAGACCA+TGG + chr3_2:25130655-25130674 Msa0400650:CDS 45.0%
!! TGCTAGTTCTAGACCATGGA+TGG + chr3_2:25130659-25130678 Msa0400650:CDS 45.0%
AGACCATGGATGGTAACACA+AGG + chr3_2:25130669-25130688 Msa0400650:CDS 45.0%
GACCATGGATGGTAACACAA+GGG + chr3_2:25130670-25130689 Msa0400650:CDS 45.0%
TTCCCTTGTGTTACCATCCA+TGG - chr3_2:25130675-25130694 None:intergenic 45.0%
! GAGGTGGAAAATGCCATTTG+AGG + chr3_2:25130749-25130768 Msa0400650:CDS 45.0%
GGTGCTCACATTATCATGCT+TGG + chr3_2:25130816-25130835 Msa0400650:CDS 45.0%
TATGAACACCGACAGAGACA+TGG + chr3_2:25131048-25131067 Msa0400650:intron 45.0%
TTCCTCGATTAGGTGTATCC+CGG - chr3_2:25131197-25131216 None:intergenic 45.0%
GATAATTCCGTAAAGCAGCG+CGG - chr3_2:25131849-25131868 None:intergenic 45.0%
AATGCATGCATCTCTCACCA+AGG - chr3_2:25132019-25132038 None:intergenic 45.0%
ACAGATGGATCTGTCAAAGG+TGG + chr3_2:25132520-25132539 Msa0400650:intron 45.0%
TGTCAAAGGTGGACAGGAAA+AGG + chr3_2:25132531-25132550 Msa0400650:CDS 45.0%
AACACAGCTCATCAAGGTGA+AGG + chr3_2:25132599-25132618 Msa0400650:CDS 45.0%
AGCATAAAGCAATGGCTCCA+TGG - chr3_2:25132642-25132661 None:intergenic 45.0%
ACGCTAGCAGCATAAAGCAA+TGG - chr3_2:25132650-25132669 None:intergenic 45.0%
GTTACATGAACAGCACCACA+AGG - chr3_2:25132832-25132851 None:intergenic 45.0%
TGGAGGGAACAAAGAAGGAT+TGG + chr3_2:25132861-25132880 Msa0400650:CDS 45.0%
ATATAGATCCACCGCCAAAG+TGG + chr3_2:25133031-25133050 Msa0400650:CDS 45.0%
TCACGGAATTCTGACCACTT+TGG - chr3_2:25133048-25133067 None:intergenic 45.0%
!! CGTGAAGCAAGTTTTGGTCA+TGG + chr3_2:25133063-25133082 Msa0400650:CDS 45.0%
ACATCCTGAGCTGTCTAAAG+AGG - chr3_2:25133181-25133200 None:intergenic 45.0%
TTGACTGCAGTGACTCTGCA+GGG - chr3_2:25129439-25129458 None:intergenic 50.0%
ATTGACTGCAGTGACTCTGC+AGG - chr3_2:25129440-25129459 None:intergenic 50.0%
ACAAGCACGTGAGAATCACC+TGG + chr3_2:25130241-25130260 Msa0400650:CDS 50.0%
CAAGCACGTGAGAATCACCT+GGG + chr3_2:25130242-25130261 Msa0400650:CDS 50.0%
! TTTTACCGATGCGGTGGACA+AGG + chr3_2:25130429-25130448 Msa0400650:CDS 50.0%
! TTTGCTGTGGTCGGAGATCT+TGG + chr3_2:25130498-25130517 Msa0400650:CDS 50.0%
GAGATCTTGGCCAAACTGGT+TGG + chr3_2:25130511-25130530 Msa0400650:CDS 50.0%
ATCGTTGGGACACGTTTGGT+AGG + chr3_2:25130622-25130641 Msa0400650:CDS 50.0%
ACCGACAGAGACATGGACAT+CGG + chr3_2:25131055-25131074 Msa0400650:intron 50.0%
!! TATTATCGGTGTCGGCGTGT+CGG - chr3_2:25131095-25131114 None:intergenic 50.0%
GATTAGGTGTATCCCGGTGT+CGG - chr3_2:25131191-25131210 None:intergenic 50.0%
AGCACGGACATTCCTCGATT+AGG - chr3_2:25131207-25131226 None:intergenic 50.0%
GAGGAATGTCCGTGCTTCAT+AGG + chr3_2:25131211-25131230 Msa0400650:intron 50.0%
! CAAGTAATGGGGGTAGTCCT+AGG - chr3_2:25131903-25131922 None:intergenic 50.0%
TGGATCTGTCAAAGGTGGAC+AGG + chr3_2:25132525-25132544 Msa0400650:CDS 50.0%
TGGACAGGAAAAGGACACCT+TGG + chr3_2:25132540-25132559 Msa0400650:CDS 50.0%
ACAGCTCATCAAGGTGAAGG+TGG + chr3_2:25132602-25132621 Msa0400650:CDS 50.0%
TGTCCACGCATATGAACGCT+CGG + chr3_2:25132691-25132710 Msa0400650:CDS 50.0%
ATACCGAGCGTTCATATGCG+TGG - chr3_2:25132697-25132716 None:intergenic 50.0%
GAACGCTCGGTATGCTAATG+TGG + chr3_2:25132704-25132723 Msa0400650:intron 50.0%
!! GGTGATGGAGGGAACAAAGA+AGG + chr3_2:25132856-25132875 Msa0400650:CDS 50.0%
AATTCTGACCACTTTGGCGG+TGG - chr3_2:25133042-25133061 None:intergenic 50.0%
CGGAATTCTGACCACTTTGG+CGG - chr3_2:25133045-25133064 None:intergenic 50.0%
!! CAACACATGCCTTCTGGAGT+TGG + chr3_2:25133106-25133125 Msa0400650:CDS 50.0%
TTGACTGCAGTGACTCTGCA+GGG - chr3_2:25129439-25129458 None:intergenic 50.0%
ATTGACTGCAGTGACTCTGC+AGG - chr3_2:25129440-25129459 None:intergenic 50.0%
ACAAGCACGTGAGAATCACC+TGG + chr3_2:25130241-25130260 Msa0400650:CDS 50.0%
CAAGCACGTGAGAATCACCT+GGG + chr3_2:25130242-25130261 Msa0400650:CDS 50.0%
! TTTTACCGATGCGGTGGACA+AGG + chr3_2:25130429-25130448 Msa0400650:CDS 50.0%
! TTTGCTGTGGTCGGAGATCT+TGG + chr3_2:25130498-25130517 Msa0400650:CDS 50.0%
GAGATCTTGGCCAAACTGGT+TGG + chr3_2:25130511-25130530 Msa0400650:CDS 50.0%
ATCGTTGGGACACGTTTGGT+AGG + chr3_2:25130622-25130641 Msa0400650:CDS 50.0%
ACCGACAGAGACATGGACAT+CGG + chr3_2:25131055-25131074 Msa0400650:intron 50.0%
!! TATTATCGGTGTCGGCGTGT+CGG - chr3_2:25131095-25131114 None:intergenic 50.0%
GATTAGGTGTATCCCGGTGT+CGG - chr3_2:25131191-25131210 None:intergenic 50.0%
AGCACGGACATTCCTCGATT+AGG - chr3_2:25131207-25131226 None:intergenic 50.0%
GAGGAATGTCCGTGCTTCAT+AGG + chr3_2:25131211-25131230 Msa0400650:intron 50.0%
! CAAGTAATGGGGGTAGTCCT+AGG - chr3_2:25131903-25131922 None:intergenic 50.0%
TGGATCTGTCAAAGGTGGAC+AGG + chr3_2:25132525-25132544 Msa0400650:CDS 50.0%
TGGACAGGAAAAGGACACCT+TGG + chr3_2:25132540-25132559 Msa0400650:CDS 50.0%
ACAGCTCATCAAGGTGAAGG+TGG + chr3_2:25132602-25132621 Msa0400650:CDS 50.0%
TGTCCACGCATATGAACGCT+CGG + chr3_2:25132691-25132710 Msa0400650:CDS 50.0%
ATACCGAGCGTTCATATGCG+TGG - chr3_2:25132697-25132716 None:intergenic 50.0%
GAACGCTCGGTATGCTAATG+TGG + chr3_2:25132704-25132723 Msa0400650:intron 50.0%
!! GGTGATGGAGGGAACAAAGA+AGG + chr3_2:25132856-25132875 Msa0400650:CDS 50.0%
AATTCTGACCACTTTGGCGG+TGG - chr3_2:25133042-25133061 None:intergenic 50.0%
CGGAATTCTGACCACTTTGG+CGG - chr3_2:25133045-25133064 None:intergenic 50.0%
!! CAACACATGCCTTCTGGAGT+TGG + chr3_2:25133106-25133125 Msa0400650:CDS 50.0%
TCGGCGATCATGAGCCTGTT+TGG + chr3_2:25129951-25129970 Msa0400650:five_prime_UTR 55.0%
GCTACCGAGTCATACTTCCC+TGG - chr3_2:25130315-25130334 None:intergenic 55.0%
!! GGTGTTTTGAGCTGGAGCTC+AGG - chr3_2:25130456-25130475 None:intergenic 55.0%
!! GAGCTGGTGGTGTTTTGAGC+TGG - chr3_2:25130464-25130483 None:intergenic 55.0%
GTCGGAGATCTTGGCCAAAC+TGG + chr3_2:25130507-25130526 Msa0400650:CDS 55.0%
ACGAAAGGTCGCCAGGAATC+AGG - chr3_2:25130584-25130603 None:intergenic 55.0%
CAGCATCGTTGGGACACGTT+TGG + chr3_2:25130618-25130637 Msa0400650:CDS 55.0%
CCCGATGTCCATGTCTCTGT+CGG - chr3_2:25131059-25131078 None:intergenic 55.0%
CCGACAGAGACATGGACATC+GGG + chr3_2:25131056-25131075 Msa0400650:intron 55.0%
CACCGGGATACACCTAATCG+AGG + chr3_2:25131192-25131211 Msa0400650:intron 55.0%
!! ATGCCTTCTGGAGTTGGCAC+CGG + chr3_2:25133112-25133131 Msa0400650:CDS 55.0%
! ATTCCGGTGCCAACTCCAGA+AGG - chr3_2:25133118-25133137 None:intergenic 55.0%
CCGGCTCATCATCGTCATTC+CGG - chr3_2:25133134-25133153 None:intergenic 55.0%
CCGGAATGACGATGATGAGC+CGG + chr3_2:25133131-25133150 Msa0400650:CDS 55.0%
TCGGCGATCATGAGCCTGTT+TGG + chr3_2:25129951-25129970 Msa0400650:five_prime_UTR 55.0%
GCTACCGAGTCATACTTCCC+TGG - chr3_2:25130315-25130334 None:intergenic 55.0%
!! GGTGTTTTGAGCTGGAGCTC+AGG - chr3_2:25130456-25130475 None:intergenic 55.0%
!! GAGCTGGTGGTGTTTTGAGC+TGG - chr3_2:25130464-25130483 None:intergenic 55.0%
GTCGGAGATCTTGGCCAAAC+TGG + chr3_2:25130507-25130526 Msa0400650:CDS 55.0%
ACGAAAGGTCGCCAGGAATC+AGG - chr3_2:25130584-25130603 None:intergenic 55.0%
CAGCATCGTTGGGACACGTT+TGG + chr3_2:25130618-25130637 Msa0400650:CDS 55.0%
CCCGATGTCCATGTCTCTGT+CGG - chr3_2:25131059-25131078 None:intergenic 55.0%
CCGACAGAGACATGGACATC+GGG + chr3_2:25131056-25131075 Msa0400650:intron 55.0%
CACCGGGATACACCTAATCG+AGG + chr3_2:25131192-25131211 Msa0400650:intron 55.0%
!! ATGCCTTCTGGAGTTGGCAC+CGG + chr3_2:25133112-25133131 Msa0400650:CDS 55.0%
! ATTCCGGTGCCAACTCCAGA+AGG - chr3_2:25133118-25133137 None:intergenic 55.0%
CCGGCTCATCATCGTCATTC+CGG - chr3_2:25133134-25133153 None:intergenic 55.0%
CCGGAATGACGATGATGAGC+CGG + chr3_2:25133131-25133150 Msa0400650:CDS 55.0%
CAGGACCTTGTCCACCGCAT+CGG - chr3_2:25130437-25130456 None:intergenic 60.0%
TCGGCATACGAAAGGTCGCC+AGG - chr3_2:25130591-25130610 None:intergenic 60.0%
CATGGACATCGGGCACGACA+CGG + chr3_2:25131066-25131085 Msa0400650:intron 60.0%
CACTGATGCGTGTCCGACAC+CGG + chr3_2:25131175-25131194 Msa0400650:intron 60.0%
ACTGATGCGTGTCCGACACC+GGG + chr3_2:25131176-25131195 Msa0400650:intron 60.0%
! ACGCACTCCGCGCTGCTTTA+CGG + chr3_2:25131839-25131858 Msa0400650:intron 60.0%
CAGGACCTTGTCCACCGCAT+CGG - chr3_2:25130437-25130456 None:intergenic 60.0%
TCGGCATACGAAAGGTCGCC+AGG - chr3_2:25130591-25130610 None:intergenic 60.0%
CATGGACATCGGGCACGACA+CGG + chr3_2:25131066-25131085 Msa0400650:intron 60.0%
CACTGATGCGTGTCCGACAC+CGG + chr3_2:25131175-25131194 Msa0400650:intron 60.0%
ACTGATGCGTGTCCGACACC+GGG + chr3_2:25131176-25131195 Msa0400650:intron 60.0%
! ACGCACTCCGCGCTGCTTTA+CGG + chr3_2:25131839-25131858 Msa0400650:intron 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 25129239 25133351 25129239 ID=Msa0400650;Name=Msa0400650
chr3_2 mRNA 25129239 25133351 25129239 ID=Msa0400650-mRNA-1;Parent=Msa0400650;Name=Msa0400650-mRNA-1;_AED=0.10;_eAED=0.10;_QI=914|0.75|0.6|0.8|1|1|5|0|387
chr3_2 exon 25129239 25130887 25129239 ID=Msa0400650-mRNA-1:exon:5234;Parent=Msa0400650-mRNA-1
chr3_2 exon 25132524 25132712 25132524 ID=Msa0400650-mRNA-1:exon:5235;Parent=Msa0400650-mRNA-1
chr3_2 exon 25132802 25132890 25132802 ID=Msa0400650-mRNA-1:exon:5236;Parent=Msa0400650-mRNA-1
chr3_2 exon 25133029 25133152 25133029 ID=Msa0400650-mRNA-1:exon:5237;Parent=Msa0400650-mRNA-1
chr3_2 exon 25133325 25133351 25133325 ID=Msa0400650-mRNA-1:exon:5238;Parent=Msa0400650-mRNA-1
chr3_2 five_prime_UTR 25129239 25130152 25129239 ID=Msa0400650-mRNA-1:five_prime_utr;Parent=Msa0400650-mRNA-1
chr3_2 CDS 25130153 25130887 25130153 ID=Msa0400650-mRNA-1:cds;Parent=Msa0400650-mRNA-1
chr3_2 CDS 25132524 25132712 25132524 ID=Msa0400650-mRNA-1:cds;Parent=Msa0400650-mRNA-1
chr3_2 CDS 25132802 25132890 25132802 ID=Msa0400650-mRNA-1:cds;Parent=Msa0400650-mRNA-1
chr3_2 CDS 25133029 25133152 25133029 ID=Msa0400650-mRNA-1:cds;Parent=Msa0400650-mRNA-1
chr3_2 CDS 25133325 25133351 25133325 ID=Msa0400650-mRNA-1:cds;Parent=Msa0400650-mRNA-1
Gene Sequence

>Msa0400650

ATGTTATTTTCTGACACTATAATTTCATATATTTATTCAGATTCTTATATGAAAAGTGGAATCCAGGTACACATTTCTTTGGCAGGAGACAAGCACGTGAGAATCACCTGGGTTACTGATGACAAATCTGCACCTTCAGTTGTAGAATATGGAACATTGCCAGGGAAGTATGACTCGGTAGCTGAAGGAGAGACAACCTCTTACAGTTACATTTTCTACAGCTCAGGAAAGATACACCATACGGTAATAGGTCCTTTAGAGCCGAATTCTGTTTACTTTTACCGATGCGGTGGACAAGGTCCTGAGCTCCAGCTCAAAACACCACCAGCTCAATTCCCAATTAGTTTTGCTGTGGTCGGAGATCTTGGCCAAACTGGTTGGACCAAATCAACATTAGATCACATCGACCAATGCAGATACGATGTTAACCTGATTCCTGGCGACCTTTCGTATGCCGACTATATACAGCATCGTTGGGACACGTTTGGTAGGCTTGTGCAGCCACTTGCTAGTTCTAGACCATGGATGGTAACACAAGGGAATCATGAAGTAGAGCATATACCTTTGTTAAAGGATGGATTTATATCCTATAATTCGAGGTGGAAAATGCCATTTGAGGAAAGTGGATCAAGCTCGAATCTCTATTATTCTTTTGAAGTTGCTGGTGCTCACATTATCATGCTTGGTTCATATGATGATTATGACGTGTACTCAGAACAATATAAATGGCTAAAGATGGATCTGTCAAAGGTGGACAGGAAAAGGACACCTTGGTTGCTTGTCATATTTCATGTGCCATGGTATAATAGTAACACAGCTCATCAAGGTGAAGGTGGTGATATGATGAAAACCATGGAGCCATTGCTTTATGCTGCTAGCGTCGATTTAGTTTTTGCAGGTCATGTCCACGCATATGAACGCTCGAAACGTGTATATAATGGAAAATTGGATCCTTGTGGTGCTGTTCATGTAACAATTGGTGATGGAGGGAACAAAGAAGGATTGGCTCATAAGTATATAGATCCACCGCCAAAGTGGTCAGAATTCCGTGAAGCAAGTTTTGGTCATGGTGAGCTAAAGATTGTAAACTCAACACATGCCTTCTGGAGTTGGCACCGGAATGACGATGATGAGCCGGGAATTGATAATCTTGTCAACCTCTAG
Protein sequence

>Msa0400650

MLFSDTIISYIYSDSYMKSGIQVHISLAGDKHVRITWVTDDKSAPSVVEYGTLPGKYDSVAEGETTSYSYIFYSSGKIHHTVIGPLEPNSVYFYRCGGQGPELQLKTPPAQFPISFAVVGDLGQTGWTKSTLDHIDQCRYDVNLIPGDLSYADYIQHRWDTFGRLVQPLASSRPWMVTQGNHEVEHIPLLKDGFISYNSRWKMPFEESGSSSNLYYSFEVAGAHIIMLGSYDDYDVYSEQYKWLKMDLSKVDRKRTPWLLVIFHVPWYNSNTAHQGEGGDMMKTMEPLLYAASVDLVFAGHVHAYERSKRVYNGKLDPCGAVHVTIGDGGNKEGLAHKYIDPPPKWSEFREASFGHGELKIVNSTHAFWSWHRNDDDEPGIDNLVNL*