AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0226310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0226310 MtrunA17_Chr2g0333021 98.888 809 9 0 1 809 1 809 0.0 1666
Msa0226310 MtrunA17_Chr4g0003411 86.279 809 110 1 1 809 1 808 0.0 1485
Msa0226310 MtrunA17_Chr3g0137791 64.354 836 254 11 5 809 4 826 0.0 1084
Msa0226310 MtrunA17_Chr3g0137821 63.164 828 273 11 5 809 4 822 0.0 1063
Msa0226310 MtrunA17_Chr7g0246481 46.368 826 392 16 4 797 297 1103 0.0 734
Msa0226310 MtrunA17_Chr5g0398161 45.738 833 388 17 4 797 36 843 0.0 731
Msa0226310 MtrunA17_Chr8g0350951 45.933 836 392 17 1 797 224 1038 0.0 731
Msa0226310 MtrunA17_Chr5g0398171 45.134 822 403 17 4 797 36 837 0.0 714
Msa0226310 MtrunA17_Chr5g0406161 46.278 806 368 14 50 809 86 872 0.0 712
Msa0226310 MtrunA17_Chr8g0380631 45.285 859 395 22 4 809 13 849 0.0 698
Msa0226310 MtrunA17_Chr3g0143471 43.643 873 412 19 2 809 9 866 0.0 689
Msa0226310 MtrunA17_Chr2g0330431 44.760 811 384 19 5 809 4 756 0.0 651
Msa0226310 MtrunA17_Chr8g0341931 42.506 814 392 22 5 809 7 753 0.0 605
Msa0226310 MtrunA17_Chr1g0192401 33.054 239 123 9 498 726 733 944 3.74e-23 105
Msa0226310 MtrunA17_Chr1g0192401 28.571 231 120 9 210 427 361 559 4.02e-15 80.1
Msa0226310 MtrunA17_Chr5g0406151 54.167 72 29 1 320 391 12 79 6.64e-23 93.6
Msa0226310 MtrunA17_Chr2g0295411 30.924 249 132 10 457 693 736 956 1.92e-18 90.9
Msa0226310 MtrunA17_Chr2g0295411 26.538 260 135 11 211 449 388 612 6.14e-14 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0226310 AT3G15730.1 80.812 813 149 2 1 809 1 810 0.0 1400
Msa0226310 AT1G52570.1 79.285 811 165 3 1 809 1 810 0.0 1364
Msa0226310 AT1G52570.3 79.285 811 165 3 1 809 1 810 0.0 1364
Msa0226310 AT1G52570.2 79.285 811 165 3 1 809 1 810 0.0 1364
Msa0226310 AT5G25370.1 62.228 826 284 10 3 809 4 820 0.0 1038
Msa0226310 AT5G25370.3 62.228 826 284 10 3 809 4 820 0.0 1038
Msa0226310 AT5G25370.2 62.228 826 284 10 3 809 4 820 0.0 1038
Msa0226310 AT5G25370.4 65.323 744 249 6 72 809 5 745 0.0 1006
Msa0226310 AT2G42010.1 45.742 822 400 16 4 797 269 1072 0.0 738
Msa0226310 AT2G42010.2 44.668 844 402 16 4 797 269 1097 0.0 730
Msa0226310 AT4G00240.1 45.910 819 403 16 4 797 113 916 0.0 726
Msa0226310 AT4G00240.2 47.416 774 373 14 44 797 122 881 0.0 723
Msa0226310 AT4G00240.3 47.416 774 373 14 44 797 5 764 0.0 723
Msa0226310 AT4G11830.2 45.048 828 405 18 5 797 33 845 0.0 713
Msa0226310 AT4G11830.1 46.410 780 377 17 44 797 49 813 0.0 707
Msa0226310 AT4G11840.1 44.565 828 409 17 5 797 43 855 0.0 706
Msa0226310 AT4G11850.1 44.782 824 409 16 5 797 39 847 0.0 704
Msa0226310 AT4G11840.2 44.256 827 383 17 5 797 43 825 0.0 691
Msa0226310 AT4G35790.2 45.330 803 379 18 46 809 76 857 0.0 672
Msa0226310 AT4G35790.1 44.963 814 377 19 46 809 76 868 0.0 667
Msa0226310 AT1G55180.1 40.465 818 408 19 6 809 10 762 0.0 587
Msa0226310 AT1G55180.2 41.505 771 391 17 50 809 19 740 0.0 586
Msa0226310 AT4G35790.3 45.219 617 290 13 46 627 76 679 8.02e-173 515
Msa0226310 AT4G11830.4 44.007 609 304 12 5 590 33 627 2.34e-168 501
Msa0226310 AT4G11830.3 43.740 599 300 12 5 580 33 617 3.20e-164 491
Msa0226310 AT3G05630.1 27.036 614 289 27 208 725 372 922 8.27e-31 130
Msa0226310 AT3G16785.6 34.483 203 99 8 497 693 756 930 9.53e-19 92.0
Msa0226310 AT3G16785.6 30.045 223 105 8 221 427 390 577 5.88e-15 79.7
Msa0226310 AT3G16785.5 34.483 203 99 8 497 693 756 930 9.53e-19 92.0
Msa0226310 AT3G16785.5 30.045 223 105 8 221 427 390 577 5.88e-15 79.7
Msa0226310 AT3G16785.3 34.483 203 99 8 497 693 756 930 9.53e-19 92.0
Msa0226310 AT3G16785.3 28.514 249 123 9 221 449 390 603 5.75e-15 80.1
Msa0226310 AT3G16785.2 34.483 203 99 8 497 693 756 930 9.53e-19 92.0
Msa0226310 AT3G16785.2 28.514 249 123 9 221 449 390 603 5.75e-15 80.1
Msa0226310 AT3G16785.1 34.483 203 99 8 497 693 756 930 9.94e-19 92.0
Msa0226310 AT3G16785.1 28.514 249 123 9 221 449 390 603 5.61e-15 80.1
Msa0226310 AT3G16785.4 34.483 203 99 8 497 693 756 930 1.03e-18 92.0
Msa0226310 AT3G16785.4 28.514 249 123 9 221 449 390 603 5.32e-15 80.1

Find 266 sgRNAs with CRISPR-Local

Find 400 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAATGCATTCTTCACTTTC+TGG 0.019872 2_1:+76815526 None:intergenic
GCCTGAACTGATGCACTTTC+TGG 0.110790 2_1:+76816461 None:intergenic
CCTATTGGGGCAACCTTAAT+TGG 0.143828 2_1:-76817898 Msa0226310:CDS
GAATCAGGTTCTGGTCTTTC+AGG 0.151953 2_1:+76816284 None:intergenic
TACTCATCATCAGAAAATTT+TGG 0.198426 2_1:-76817209 Msa0226310:CDS
ATCTTAAGTGAAAGCTCTTT+TGG 0.217956 2_1:+76816554 None:intergenic
TTGACGGTGGAGCAGCTTTC+GGG 0.225952 2_1:-76816787 Msa0226310:CDS
AACACCACAAATACTATATT+TGG 0.235974 2_1:+76815271 None:intergenic
CCTGGTGCTTCAATAGAAAA+AGG 0.253077 2_1:-76817022 Msa0226310:CDS
GACACCAAGGCTCGTGTTCT+TGG 0.259989 2_1:-76815355 Msa0226310:CDS
ACCTCCTGCAAGTTGTATAT+TGG 0.269725 2_1:+76817609 None:intergenic
ACCTTCTCCGCTATCCCATT+GGG 0.270807 2_1:-76815429 Msa0226310:CDS
TAAGGAACTCCAGGAAATTT+AGG 0.271707 2_1:+76817706 None:intergenic
ATCTTTGAATTTCCATGAAT+TGG 0.275511 2_1:+76817793 None:intergenic
ACCAGATTGCTGACAAATAT+TGG 0.280067 2_1:-76815495 Msa0226310:CDS
TTAGGGTATTAATGCTTGTT+TGG 0.281535 2_1:-76817399 Msa0226310:CDS
ACGAAACTAAGTAGTAAGTA+TGG 0.282199 2_1:+76815309 None:intergenic
AGATAGGTGGGTTGAAATAT+TGG 0.293912 2_1:-76817830 Msa0226310:CDS
ATGTTTCAAAAGACCGCAAC+TGG 0.294096 2_1:-76817747 Msa0226310:CDS
ATTGACGGTGGAGCAGCTTT+CGG 0.298826 2_1:-76816788 Msa0226310:CDS
TAGCACCATCCATTGATCTT+TGG 0.299079 2_1:+76815686 None:intergenic
TGGTGCCAATTTCTATATTC+TGG 0.302016 2_1:+76817236 None:intergenic
CCATGAATCTGACCCCTTGC+AGG 0.320797 2_1:+76815607 None:intergenic
TAATGCATTCTTCACTTTCT+GGG 0.323254 2_1:+76815527 None:intergenic
GTGAAAGATGATAATCCTAT+TGG 0.323636 2_1:-76817913 Msa0226310:CDS
ATCAATGGTTGCATAAAGTT+TGG 0.323808 2_1:+76818053 None:intergenic
CCTCCTGCAAGTTGTATATT+GGG 0.327612 2_1:+76817610 None:intergenic
CCAATTAAGGTTGCCCCAAT+AGG 0.334639 2_1:+76817898 None:intergenic
TTTCATCAGCCTAACTTTCC+TGG 0.335279 2_1:-76817040 Msa0226310:CDS
CCAGCTTTAGCAGCATCTTC+AGG 0.337228 2_1:+76816752 None:intergenic
TTATTTAATCCCACTTCATT+TGG 0.342886 2_1:+76817169 None:intergenic
GTCCCCAATATACAACTTGC+AGG 0.343312 2_1:-76817613 Msa0226310:CDS
AACCCTATCATTTAGCTAAT+AGG 0.346495 2_1:-76815633 Msa0226310:CDS
TGATCATCAGGGAAAGTTAC+TGG 0.348678 2_1:+76816842 None:intergenic
CCCAATATTTGTCAGCAATC+TGG 0.350230 2_1:+76815494 None:intergenic
TAATAAGCTTGAGATGATTA+AGG 0.351704 2_1:-76815184 Msa0226310:three_prime_UTR
TGAAAGATGATAATCCTATT+GGG 0.352247 2_1:-76817912 Msa0226310:CDS
CTGCCTATTAGCTAAATGAT+AGG 0.357619 2_1:+76815630 None:intergenic
TACTGGGGATGGGGTAATAA+TGG 0.358885 2_1:+76816859 None:intergenic
TCACATTTACTGTGCCCATT+TGG 0.361006 2_1:-76817956 Msa0226310:CDS
TTCACCAAATATAGTATTTG+TGG 0.363035 2_1:-76815275 Msa0226310:three_prime_UTR
CATTCCTGTTGAGGAGGTAT+TGG 0.363727 2_1:-76817866 Msa0226310:CDS
CACCTTCTCCGCTATCCCAT+TGG 0.367992 2_1:-76815430 Msa0226310:CDS
CCTGCAAGGGGTCAGATTCA+TGG 0.370010 2_1:-76815607 Msa0226310:CDS
AGGCACTTAATATACATTAC+AGG 0.372424 2_1:-76817529 Msa0226310:CDS
ATTGTCCAGAATATAGAAAT+TGG 0.374763 2_1:-76817241 Msa0226310:CDS
AATGTACGCCCTTCCAATTA+AGG 0.374946 2_1:+76817885 None:intergenic
TAAACTTTGTAGGTAATTGA+TGG 0.377297 2_1:-76819905 Msa0226310:intron
CCTGAACTGATGCACTTTCT+GGG 0.377490 2_1:+76816462 None:intergenic
ATTCCTGTTGAGGAGGTATT+GGG 0.378380 2_1:-76817865 Msa0226310:CDS
TAGGGTATTAATGCTTGTTT+GGG 0.385598 2_1:-76817398 Msa0226310:CDS
CTCTGTCACGCTTCCTTCAC+TGG 0.390332 2_1:+76815402 None:intergenic
CCCAGAAAGTGCATCAGTTC+AGG 0.391340 2_1:-76816462 Msa0226310:CDS
CACACAAAGACAAGGTTGTA+AGG 0.391884 2_1:-76817674 Msa0226310:CDS
GCTAAAGCTGGGCTTATTAG+TGG 0.392386 2_1:-76816740 Msa0226310:CDS
ATTAGAAGTCCTAAATTTCC+TGG 0.394374 2_1:-76817715 Msa0226310:CDS
GTGATGTCTCCTCCTGGCTT+TGG 0.396802 2_1:+76817460 None:intergenic
AGAACACGAGCCTTGGTGTC+AGG 0.406228 2_1:+76815358 None:intergenic
GGCTTGAAGGTCCCATTGCT+TGG 0.410425 2_1:-76816964 Msa0226310:CDS
CAGAAAGTGAAGAATGCATT+AGG 0.410724 2_1:-76815525 Msa0226310:CDS
TTCCACGTCTCTTGATCATC+AGG 0.411607 2_1:+76816830 None:intergenic
TGCAAAGCACCAATGTCTTC+AGG 0.412451 2_1:+76816584 None:intergenic
GTGAATAAAGAACCAATTCA+TGG 0.418317 2_1:-76817805 Msa0226310:CDS
CCAGATTGCTGACAAATATT+GGG 0.419715 2_1:-76815494 Msa0226310:CDS
AGTAGGAGTTTATTTATTCA+AGG 0.420712 2_1:+76820102 None:intergenic
CCTGAAGATGCTGCTAAAGC+TGG 0.422903 2_1:-76816752 Msa0226310:CDS
TCTTCATGCTACAATCTTTG+AGG 0.430433 2_1:-76819860 Msa0226310:CDS
TGTCTTATGCCCTCGCAATC+CGG 0.432330 2_1:-76817278 Msa0226310:CDS
TTACTTACCTATCATCATCT+TGG 0.432761 2_1:+76816211 None:intergenic
TTCGGAAAAGTGAATGAAAC+GGG 0.434688 2_1:+76817089 None:intergenic
GAGATGAAAATGAGAGTAGT+TGG 0.439267 2_1:+76820042 None:intergenic
TTTGAGGAGACAGTTGGATT+CGG 0.439825 2_1:-76818087 Msa0226310:CDS
CTTTGTGTGTAGAAAGCATA+AGG 0.440268 2_1:+76817688 None:intergenic
ATACTGAGATTTCCTTGGTA+AGG 0.443762 2_1:-76817495 Msa0226310:CDS
ATTGAAGCACCAGGAAAGTT+AGG 0.444896 2_1:+76817031 None:intergenic
ATATAATCTGAATCAGGTTC+TGG 0.445716 2_1:+76816275 None:intergenic
ATTGAAAATCAATATTTCCT+TGG 0.448120 2_1:-76816641 Msa0226310:CDS
TTTCCTTGGTAAGGGATTCA+AGG 0.448128 2_1:-76817486 Msa0226310:CDS
GGAAGGATAACATAATAGAT+AGG 0.450815 2_1:-76816718 Msa0226310:CDS
GTTCATGCCAAGATGATGAT+AGG 0.452461 2_1:-76816218 Msa0226310:intron
ATTGTTAGCAAGATTGAAGC+TGG 0.453049 2_1:-76816533 Msa0226310:CDS
CAAAACTTTGAGGAGACAGT+TGG 0.453252 2_1:-76818093 Msa0226310:CDS
TTAGATAAGACAAAACTTTG+AGG 0.453476 2_1:-76818103 Msa0226310:intron
GATATCCACTCAAGGCTTGA+AGG 0.460473 2_1:-76816977 Msa0226310:CDS
AGCAGCATCTTCAGGAGTCT+CGG 0.461063 2_1:+76816760 None:intergenic
CCACCCAATACCTCCTCAAC+AGG 0.461488 2_1:+76817862 None:intergenic
GCAGCATCTTCAGGAGTCTC+GGG 0.461536 2_1:+76816761 None:intergenic
TCGTGCTTTCTCTAAATCAA+TGG 0.461965 2_1:+76818038 None:intergenic
GGAGTTTATTTATTCAAGGA+TGG 0.463567 2_1:+76820106 None:intergenic
GCTTGAAGGTCCCATTGCTT+GGG 0.466265 2_1:-76816963 Msa0226310:CDS
GGTTAAAGAGTTAAAACTCT+TGG 0.467594 2_1:+76820154 None:intergenic
TGTTTATACTGAGATTTCCT+TGG 0.470042 2_1:-76817500 Msa0226310:CDS
TATTTGACATTCTTCTGCCT+TGG 0.470173 2_1:-76816344 Msa0226310:CDS
CATTGATCTTTGGTTGATGT+TGG 0.471677 2_1:+76815696 None:intergenic
TCCGCCAAGAACACGAGCCT+TGG 0.472706 2_1:+76815351 None:intergenic
GCTCGCATATAATCTGAATC+AGG 0.474750 2_1:+76816269 None:intergenic
GGATAGCGGAGAAGGTGGCC+AGG 0.478302 2_1:+76815436 None:intergenic
CCCATTGGGGTTTCCAGTGA+AGG 0.480016 2_1:-76815415 Msa0226310:CDS
ATATTGGGGACAAAATTGTC+TGG 0.480142 2_1:+76817625 None:intergenic
CAGGGAAAGTTACTGGGGAT+GGG 0.481757 2_1:+76816849 None:intergenic
CACGAATTAAGAAATTAAAC+CGG 0.484388 2_1:+76820133 None:intergenic
TACTGAGATTTCCTTGGTAA+GGG 0.486700 2_1:-76817494 Msa0226310:CDS
GCACTTTCTGGGACACCCTC+AGG 0.486846 2_1:+76816473 None:intergenic
ATATGATATCCGATGCCAAA+TGG 0.487948 2_1:+76817941 None:intergenic
AGCTAATAGGCAGCCTGCAA+GGG 0.491417 2_1:-76815620 Msa0226310:CDS
TATGATATCCGATGCCAAAT+GGG 0.492675 2_1:+76817942 None:intergenic
AGGAGCATGTTAATCCTCAA+TGG 0.492749 2_1:-76817990 Msa0226310:CDS
AGATTATATGCGAGCTCAAG+AGG 0.493595 2_1:-76816261 Msa0226310:CDS
AGGATCTTCCTCAATTCCCT+TGG 0.495088 2_1:+76816373 None:intergenic
AGTAGTTGGTGAATGATGAA+TGG 0.496273 2_1:+76820056 None:intergenic
AACAAAACATCCCAAGCAAT+GGG 0.497488 2_1:+76816953 None:intergenic
AAAGACCGCAACTGGGCTCT+AGG 0.498162 2_1:-76817739 Msa0226310:CDS
CCCCAATGGGATAGCGGAGA+AGG 0.498169 2_1:+76815428 None:intergenic
GAGACAGTTGGATTCGGAAA+AGG 0.499116 2_1:-76818081 Msa0226310:CDS
TGTTTAACTTTGAGCAGAGA+TGG 0.499268 2_1:-76816934 Msa0226310:CDS
GATCATCAGGGAAAGTTACT+GGG 0.499638 2_1:+76816843 None:intergenic
TCAGGGAAAGTTACTGGGGA+TGG 0.501750 2_1:+76816848 None:intergenic
CTTACCAGCCTCATAGATGT+TGG 0.502263 2_1:-76817582 Msa0226310:CDS
CCAAGTGTGATGTCTCCTCC+TGG 0.503968 2_1:+76817454 None:intergenic
CAGCTATTTAGATCTATTGA+CGG 0.506424 2_1:-76816803 Msa0226310:CDS
TCCTTCACTGGAAACCCCAA+TGG 0.508775 2_1:+76815414 None:intergenic
TAGCTAATAGGCAGCCTGCA+AGG 0.513603 2_1:-76815621 Msa0226310:CDS
TTCACTTTCTGGGTGAAGGA+AGG 0.516269 2_1:+76815537 None:intergenic
AGAGACTCTGAAATTGCAAT+GGG 0.517579 2_1:-76815664 Msa0226310:CDS
AGGGAAAGTTACTGGGGATG+GGG 0.517899 2_1:+76816850 None:intergenic
GATAAACTCAAGAATATTAG+TGG 0.518555 2_1:-76819835 Msa0226310:CDS
TTACCAGCCTCATAGATGTT+GGG 0.519232 2_1:-76817581 Msa0226310:CDS
GAATAGAACCGAGATATAGT+AGG 0.521304 2_1:+76820085 None:intergenic
GATTCAAGGAGGCCAAAGCC+AGG 0.523097 2_1:-76817472 Msa0226310:CDS
TCAGGGAAGAATTCAAATCC+TGG 0.524099 2_1:+76815376 None:intergenic
TAGAAAGCATAAGGAACTCC+AGG 0.524275 2_1:+76817697 None:intergenic
AAATATAGTATTTGTGGTGT+TGG 0.526264 2_1:-76815269 Msa0226310:three_prime_UTR
ACAATGCTTCCACCATCATC+CGG 0.527676 2_1:+76817259 None:intergenic
ATGGAGGAAGCAAGGTGGAA+AGG 0.528791 2_1:-76816915 Msa0226310:CDS
ACTCAATGCCAAGGGAATTG+AGG 0.529142 2_1:-76816381 Msa0226310:CDS
TGGTGGTAACATTCTTTCCA+AGG 0.530172 2_1:-76819815 Msa0226310:intron
TGCCCTCGCAATCCGGATGA+TGG 0.530747 2_1:-76817271 Msa0226310:CDS
ATTCTTCACTTTCTGGGTGA+AGG 0.535092 2_1:+76815533 None:intergenic
AAGGACCAGAATCATAGAAA+AGG 0.537043 2_1:-76818010 Msa0226310:CDS
TTGGGGCAACCTTAATTGGA+AGG 0.538056 2_1:-76817894 Msa0226310:CDS
AATAAACTCCTACTATATCT+CGG 0.539985 2_1:-76820093 Msa0226310:five_prime_UTR
AACATAAATCATGAAACGCC+TGG 0.540335 2_1:+76816238 None:intergenic
CCTCCCAACATCTATGAGGC+TGG 0.541750 2_1:+76817578 None:intergenic
ACCAAGGCTCGTGTTCTTGG+CGG 0.542154 2_1:-76815352 Msa0226310:CDS
ACATCCTCCCAACATCTATG+AGG 0.542285 2_1:+76817574 None:intergenic
CAACATCAACCAAAGATCAA+TGG 0.542537 2_1:-76815695 Msa0226310:CDS
ACTCTTGAGCATGATCTCCC+TGG 0.542825 2_1:-76815454 Msa0226310:CDS
CCACCATCATCCGGATTGCG+AGG 0.547386 2_1:+76817268 None:intergenic
CTAAAGCTGGGCTTATTAGT+GGG 0.547451 2_1:-76816739 Msa0226310:CDS
ATATGCGAGCTCAAGAGGCC+AGG 0.547877 2_1:-76816256 Msa0226310:CDS
GTAGTTGGTGAATGATGAAT+GGG 0.548930 2_1:+76820057 None:intergenic
CACAGTGCACTTCAGAGCCT+CGG 0.549999 2_1:+76817299 None:intergenic
GAACACGAGCCTTGGTGTCA+GGG 0.550469 2_1:+76815359 None:intergenic
GTGGTTCCCATGTGGCCTGA+GGG 0.550831 2_1:-76816488 Msa0226310:CDS
CTGAAGATGCTGCTAAAGCT+GGG 0.551525 2_1:-76816751 Msa0226310:CDS
AACTAAGTAGTAAGTATGGG+TGG 0.551950 2_1:+76815313 None:intergenic
TGTCTGGGATATGAGAATCT+TGG 0.552039 2_1:+76817641 None:intergenic
TCAGGTTCTGGTCTTTCAGG+AGG 0.552348 2_1:+76816287 None:intergenic
AAAAGCACAAGAAGGTGTTA+GGG 0.552796 2_1:-76817416 Msa0226310:CDS
CAGTTCAGGCAATATTAGAC+TGG 0.553731 2_1:-76816448 Msa0226310:CDS
ATGGCGCAAATTCTGCTACA+TGG 0.553894 2_1:-76819886 Msa0226310:CDS
CCTTCACTGGAAACCCCAAT+GGG 0.554387 2_1:+76815415 None:intergenic
TGAAAAGACTCATTCCATTG+AGG 0.555517 2_1:+76817976 None:intergenic
TTACTGTGCCCATTTGGCAT+CGG 0.556368 2_1:-76817950 Msa0226310:CDS
AAGGTGGTCCTAGGGAACCT+TGG 0.556879 2_1:-76817003 Msa0226310:CDS
GTTCGGAAAAGTGAATGAAA+CGG 0.557902 2_1:+76817088 None:intergenic
AAACAAAACATCCCAAGCAA+TGG 0.559086 2_1:+76816952 None:intergenic
TATTGAAGCACTCAATGCCA+AGG 0.561553 2_1:-76816390 Msa0226310:CDS
CGAAACTAAGTAGTAAGTAT+GGG 0.562276 2_1:+76815310 None:intergenic
GCAAGATTGAAGCTGGGGAA+AGG 0.562968 2_1:-76816526 Msa0226310:CDS
TGCCTATTAGCTAAATGATA+GGG 0.565055 2_1:+76815631 None:intergenic
ATATCATGCCAAGGTTCCCT+AGG 0.565440 2_1:+76816995 None:intergenic
TGGTGAGGAAATAGATAGGT+GGG 0.565449 2_1:-76817842 Msa0226310:CDS
TCCTTGGAAGTTGCTATGCG+TGG 0.566885 2_1:-76816625 Msa0226310:CDS
GATGTGCTGTGTCCAGAGTT+CGG 0.567045 2_1:+76817071 None:intergenic
TTGTTAGCAAGATTGAAGCT+GGG 0.569020 2_1:-76816532 Msa0226310:CDS
AGCTGGGCTTATTAGTGGGA+AGG 0.572547 2_1:-76816735 Msa0226310:CDS
GGAAGCGTGACAGAGCTGCC+AGG 0.573645 2_1:-76815394 Msa0226310:CDS
GAGCAGAGATGGAGGAAGCA+AGG 0.573687 2_1:-76816923 Msa0226310:CDS
GGTGAATGATGAATGGGAAA+AGG 0.574467 2_1:+76820063 None:intergenic
CACCATCATCCGGATTGCGA+GGG 0.575824 2_1:+76817269 None:intergenic
TAGAGACTCTGAAATTGCAA+TGG 0.576832 2_1:-76815665 Msa0226310:CDS
AGGCAATATTAGACTGGCAG+AGG 0.578738 2_1:-76816442 Msa0226310:CDS
CAATATTAGACTGGCAGAGG+AGG 0.580334 2_1:-76816439 Msa0226310:CDS
CCTTCTCCGCTATCCCATTG+GGG 0.580634 2_1:-76815428 Msa0226310:CDS
TGGGACACCCTCAGGCCACA+TGG 0.580916 2_1:+76816481 None:intergenic
CCAGGAGGAGACATCACACT+TGG 0.582493 2_1:-76817454 Msa0226310:CDS
TATTGGGGACAAAATTGTCT+GGG 0.586684 2_1:+76817626 None:intergenic
TTGATGCAATCACAAAAGCA+AGG 0.590614 2_1:-76817549 Msa0226310:CDS
TGGGGCAACCTTAATTGGAA+GGG 0.592393 2_1:-76817893 Msa0226310:CDS
TGCTATGCGTGGAGTGCTGA+TGG 0.592466 2_1:-76816614 Msa0226310:CDS
TAGAGAAAGCACGAGTGGGA+AGG 0.593690 2_1:-76818029 Msa0226310:CDS
AAGGGCGTACATTCCTGTTG+AGG 0.595296 2_1:-76817875 Msa0226310:CDS
AACTATGATAAATTCTAGCT+AGG 0.596031 2_1:-76815115 Msa0226310:three_prime_UTR
GATGATGAATACATAATCGT+CGG 0.596091 2_1:-76815724 Msa0226310:CDS
GATAGCGGAGAAGGTGGCCA+GGG 0.597233 2_1:+76815437 None:intergenic
TGGGTGGTGAGGAAATAGAT+AGG 0.598716 2_1:-76817846 Msa0226310:CDS
CAGTGAGTTGCCAAATGAAG+TGG 0.600965 2_1:-76817179 Msa0226310:CDS
TGGGACCTTCAAGCCTTGAG+TGG 0.600994 2_1:+76816972 None:intergenic
CTGCCTTGGCAATCGTGAGG+TGG 0.601677 2_1:-76816330 Msa0226310:CDS
CAATGGGATAGCGGAGAAGG+TGG 0.603242 2_1:+76815431 None:intergenic
AAGTGAAGAATGCATTAGGA+AGG 0.603278 2_1:-76815521 Msa0226310:CDS
TGTTAGCAAGATTGAAGCTG+GGG 0.605624 2_1:-76816531 Msa0226310:CDS
ACTAAGTAGTAAGTATGGGT+GGG 0.609032 2_1:+76815314 None:intergenic
GATTTAGAGAAAGCACGAGT+GGG 0.609235 2_1:-76818033 Msa0226310:CDS
ATATAGTAGAATACATGTCA+AGG 0.610154 2_1:+76815089 None:intergenic
TGTGGTTCCCATGTGGCCTG+AGG 0.610251 2_1:-76816489 Msa0226310:CDS
AATCGTGAGGTGGTAAAACA+AGG 0.614433 2_1:-76816320 Msa0226310:CDS
AAGTAGTAAGTATGGGTGGG+AGG 0.614752 2_1:+76815317 None:intergenic
CTCCTGCAAGTTGTATATTG+GGG 0.614898 2_1:+76817611 None:intergenic
AGGTTTCTTGAAGCATGCCA+AGG 0.615494 2_1:+76815557 None:intergenic
GAAAGATGATAATCCTATTG+GGG 0.615615 2_1:-76817911 Msa0226310:CDS
TGAGGAGGTATTGGGTGGTG+AGG 0.615634 2_1:-76817857 Msa0226310:CDS
CAGAGATGGAGGAAGCAAGG+TGG 0.616614 2_1:-76816920 Msa0226310:CDS
GGCGTACATTCCTGTTGAGG+AGG 0.617287 2_1:-76817872 Msa0226310:CDS
TCCACGCATAGCAACTTCCA+AGG 0.620565 2_1:+76816624 None:intergenic
GGAGGCATTGATCTCTGTGA+TGG 0.621298 2_1:-76817124 Msa0226310:CDS
CTTCTGCCTTGGCAATCGTG+AGG 0.622625 2_1:-76816333 Msa0226310:CDS
GGGACACCCTCAGGCCACAT+GGG 0.624478 2_1:+76816482 None:intergenic
GCTTTCTACACACAAAGACA+AGG 0.625992 2_1:-76817682 Msa0226310:CDS
GGCACTTAATATACATTACA+GGG 0.626213 2_1:-76817528 Msa0226310:CDS
TGATTTAGAGAAAGCACGAG+TGG 0.626791 2_1:-76818034 Msa0226310:CDS
TACTCATGATCAAGAAACTG+AGG 0.627462 2_1:-76817329 Msa0226310:CDS
TGAATTCTTCCCTGACACCA+AGG 0.627778 2_1:-76815368 Msa0226310:CDS
AGGGAATTGAGGAAGATCCT+CGG 0.629175 2_1:-76816370 Msa0226310:CDS
CAATGACTGTAATGGTACAA+TGG 0.629422 2_1:-76815240 Msa0226310:three_prime_UTR
TGGAAACCCCAATGGGATAG+CGG 0.631998 2_1:+76815422 None:intergenic
CTTGGCATGATATCCACTCA+AGG 0.633068 2_1:-76816985 Msa0226310:CDS
ATGGTTTCCGCATGTCGTTG+TGG 0.633145 2_1:-76815588 Msa0226310:CDS
GCTAATAGGCAGCCTGCAAG+GGG 0.633258 2_1:-76815619 Msa0226310:CDS
AGTGAGTTGCCAAATGAAGT+GGG 0.635597 2_1:-76817178 Msa0226310:CDS
GGTATTAAGCCTGAAGACAT+TGG 0.635944 2_1:-76816593 Msa0226310:CDS
AAACTCAAGAATATTAGTGG+TGG 0.636100 2_1:-76819832 Msa0226310:CDS
CTATTTAGATCTATTGACGG+TGG 0.636765 2_1:-76816800 Msa0226310:CDS
TTACCACCTCACGATTGCCA+AGG 0.638073 2_1:+76816327 None:intergenic
ATTGAAGCACTCAATGCCAA+GGG 0.639765 2_1:-76816389 Msa0226310:CDS
ATCAACCAAAGATCAATGGA+TGG 0.639768 2_1:-76815691 Msa0226310:CDS
AAGGTTCACTGTGTATGTTG+TGG 0.644280 2_1:-76816507 Msa0226310:CDS
TAATGCCTAGAGCCCAGTTG+CGG 0.646642 2_1:+76817734 None:intergenic
CCTCGCAATCCGGATGATGG+TGG 0.647794 2_1:-76817268 Msa0226310:CDS
TGTTTGGGATGATAGAACGT+CGG 0.648160 2_1:-76817383 Msa0226310:CDS
CCTCCTTGAATCCCTTACCA+AGG 0.648283 2_1:+76817483 None:intergenic
GTGGTGAGGAAATAGATAGG+TGG 0.648470 2_1:-76817843 Msa0226310:CDS
GCTCATACCACAACGACATG+CGG 0.651651 2_1:+76815581 None:intergenic
TCCACGTCTCTTGATCATCA+GGG 0.654558 2_1:+76816831 None:intergenic
TCCCTGATGATCAAGAGACG+TGG 0.655773 2_1:-76816832 Msa0226310:CDS
CAGCATCTTCAGGAGTCTCG+GGG 0.656506 2_1:+76816762 None:intergenic
TGTTTCAAAAGACCGCAACT+GGG 0.657307 2_1:-76817746 Msa0226310:CDS
CCAGCCTCATAGATGTTGGG+AGG 0.659901 2_1:-76817578 Msa0226310:CDS
CCTTGGTAAGGGATTCAAGG+AGG 0.659944 2_1:-76817483 Msa0226310:CDS
GAAACTGAGGAATTCTTCCG+AGG 0.663978 2_1:-76817316 Msa0226310:CDS
AAGAATGTCAAATAGTTCCG+AGG 0.664275 2_1:+76816353 None:intergenic
CTTGAGTGGATATCATGCCA+AGG 0.664717 2_1:+76816986 None:intergenic
GGTGTGAACAATGACTGTAA+TGG 0.670035 2_1:-76815248 Msa0226310:three_prime_UTR
CCTGTTGAGGAGGTATTGGG+TGG 0.671652 2_1:-76817862 Msa0226310:CDS
TTAACTTTGAGCAGAGATGG+AGG 0.672683 2_1:-76816931 Msa0226310:CDS
ATCATCAGGGAAAGTTACTG+GGG 0.676162 2_1:+76816844 None:intergenic
GCATCTTCAAGCTCTCTCAG+AGG 0.687558 2_1:+76816881 None:intergenic
AGACTGGCAGAGGAGGACAA+TGG 0.689150 2_1:-76816432 Msa0226310:CDS
CCCAATATACAACTTGCAGG+AGG 0.700952 2_1:-76817610 Msa0226310:CDS
TCAAGGAGGCCAAAGCCAGG+AGG 0.704971 2_1:-76817469 Msa0226310:CDS
TTTCTGATGATGAGTAAACA+TGG 0.707021 2_1:+76817216 None:intergenic
TGTATGTTGTGGTTCCCATG+TGG 0.707881 2_1:-76816496 Msa0226310:CDS
TCGTTGTGGTATGAGCACCT+TGG 0.762594 2_1:-76815574 Msa0226310:CDS
ACTTAATATACATTACAGGG+TGG 0.764594 2_1:-76817525 Msa0226310:CDS
TCGGAAAAGTGAATGAAACG+GGG 0.795326 2_1:+76817090 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAAATCAAATCTT+CGG + chr2_1:76815995-76816014 None:intergenic 10.0%
!! ATATATTCATTTAGATTATT+AGG - chr2_1:76816420-76816439 Msa0226310:CDS 10.0%
!! TATATTCATTTAGATTATTA+GGG - chr2_1:76816421-76816440 Msa0226310:CDS 10.0%
!! CAAATGATTAGAATTTAAAA+TGG + chr2_1:76815237-76815256 None:intergenic 15.0%
!! AATAAAAGCCAAAAAAAAAA+AGG + chr2_1:76815403-76815422 None:intergenic 15.0%
!!! ATTTTTTGTGAAAAAGAAAA+AGG - chr2_1:76816017-76816036 Msa0226310:intron 15.0%
!!! TTTTTTGTGAAAAAGAAAAA+GGG - chr2_1:76816018-76816037 Msa0226310:intron 15.0%
!! TAAAAAAAGTAAATCACTTT+AGG - chr2_1:76816236-76816255 Msa0226310:CDS 15.0%
!!! TTGATTTTAAAGTTATTTGT+AGG - chr2_1:76819210-76819229 Msa0226310:intron 15.0%
!! AATTATTCATTTAGATAAGT+TGG - chr2_1:76819260-76819279 Msa0226310:intron 15.0%
!! TAACTATAGTTAAACTTTGT+AGG - chr2_1:76815264-76815283 Msa0226310:three_prime_UTR 20.0%
!!! CTTTTCTTCCTTTTTTTTTT+TGG - chr2_1:76815392-76815411 Msa0226310:CDS 20.0%
!!! TTTTACTTAACTTAGTTCTT+AGG - chr2_1:76815453-76815472 Msa0226310:CDS 20.0%
!!! ATTCAATCTGAAATTTTGTT+AGG - chr2_1:76815717-76815736 Msa0226310:CDS 20.0%
!!! GTTAGGTTAATTGTAATTTT+TGG - chr2_1:76815734-76815753 Msa0226310:intron 20.0%
!! TAAACTCATAAATGTTTGAA+TGG - chr2_1:76815912-76815931 Msa0226310:intron 20.0%
!! TAGATTGTAAGAATGAAAAA+AGG - chr2_1:76816047-76816066 Msa0226310:intron 20.0%
!! AGATTGTAAGAATGAAAAAA+GGG - chr2_1:76816048-76816067 Msa0226310:intron 20.0%
!! AAAAGAACATTAAATGTGAT+TGG + chr2_1:76816150-76816169 None:intergenic 20.0%
!!! ATGTTTGATTTTAATTGTGA+AGG - chr2_1:76816476-76816495 Msa0226310:CDS 20.0%
!!! TGTTTGATTTTAATTGTGAA+GGG - chr2_1:76816477-76816496 Msa0226310:CDS 20.0%
!! AGATTCAAATGAACAAATTA+AGG + chr2_1:76816526-76816545 None:intergenic 20.0%
!! ATCAAAAGAATAGATTGTTA+AGG + chr2_1:76816800-76816819 None:intergenic 20.0%
!!! GAAACAAAAATATTTTCATC+AGG + chr2_1:76816935-76816954 None:intergenic 20.0%
!! ATTGAAAATCAATATTTCCT+TGG - chr2_1:76818538-76818557 Msa0226310:intron 20.0%
!! AAGGAATGTTATACAAAATA+TGG + chr2_1:76819007-76819026 None:intergenic 20.0%
!!! CTCAATCATAAAAAAAGTAT+TGG + chr2_1:76819044-76819063 None:intergenic 20.0%
!! AAAGTTATTTGTAGGAAAAA+AGG - chr2_1:76819218-76819237 Msa0226310:intron 20.0%
!!! AAGAGTTTTAACTCTTTAAC+CGG - chr2_1:76815027-76815046 Msa0226310:three_prime_UTR 25.0%
! CACGAATTAAGAAATTAAAC+CGG + chr2_1:76815049-76815068 None:intergenic 25.0%
! AGTAGGAGTTTATTTATTCA+AGG + chr2_1:76815080-76815099 None:intergenic 25.0%
! AATAAACTCCTACTATATCT+CGG - chr2_1:76815086-76815105 Msa0226310:three_prime_UTR 25.0%
! TAAACTTTGTAGGTAATTGA+TGG - chr2_1:76815274-76815293 Msa0226310:three_prime_UTR 25.0%
! GATAAACTCAAGAATATTAG+TGG - chr2_1:76815344-76815363 Msa0226310:CDS 25.0%
!!! TCTGTTATTTGTTTGTTGTA+CGG - chr2_1:76815478-76815497 Msa0226310:CDS 25.0%
! TTATAATATCGCCAATTGTA+TGG - chr2_1:76816301-76816320 Msa0226310:CDS 25.0%
! TACTGTTGTAAATTTCTAAC+TGG - chr2_1:76816359-76816378 Msa0226310:CDS 25.0%
!!! CAAAAGGTCATTTTAATTTC+AGG + chr2_1:76816565-76816584 None:intergenic 25.0%
!!! CATATGTGTTCATGTTTTTT+GGG + chr2_1:76816667-76816686 None:intergenic 25.0%
!!! TCATATGTGTTCATGTTTTT+TGG + chr2_1:76816668-76816687 None:intergenic 25.0%
!!! TGATGGGATATTTTTAAGAA+TGG - chr2_1:76816760-76816779 Msa0226310:CDS 25.0%
!!! GATGGGATATTTTTAAGAAT+GGG - chr2_1:76816761-76816780 Msa0226310:CDS 25.0%
!! ATCTTAACCTTGTTCATTTT+AGG - chr2_1:76816818-76816837 Msa0226310:CDS 25.0%
!! TCTTAACCTTGTTCATTTTA+GGG - chr2_1:76816819-76816838 Msa0226310:CDS 25.0%
! TTTGTACCTTTATTACATGA+TGG - chr2_1:76816958-76816977 Msa0226310:CDS 25.0%
!! GAAGGATAATTTTTCACTTT+TGG - chr2_1:76816980-76816999 Msa0226310:CDS 25.0%
! TTAGATAAGACAAAACTTTG+AGG - chr2_1:76817076-76817095 Msa0226310:CDS 25.0%
! TGAAAGATGATAATCCTATT+GGG - chr2_1:76817267-76817286 Msa0226310:CDS 25.0%
! ATCTTTGAATTTCCATGAAT+TGG + chr2_1:76817389-76817408 None:intergenic 25.0%
! TTCCTCTGTTAAAAAAAGAT+GGG - chr2_1:76817819-76817838 Msa0226310:CDS 25.0%
! ATTGTCCAGAATATAGAAAT+TGG - chr2_1:76817938-76817957 Msa0226310:CDS 25.0%
!! TACTCATCATCAGAAAATTT+TGG - chr2_1:76817970-76817989 Msa0226310:CDS 25.0%
! TTATTTAATCCCACTTCATT+TGG + chr2_1:76818013-76818032 None:intergenic 25.0%
!!! GAATTTTTTTTGTCCAAATG+TGG + chr2_1:76819287-76819306 None:intergenic 25.0%
! TGAGATTAATAAAAGAAAGC+TGG - chr2_1:76819338-76819357 Msa0226310:intron 25.0%
! TTCACCAAATATAGTATTTG+TGG - chr2_1:76819904-76819923 Msa0226310:intron 25.0%
! AACACCACAAATACTATATT+TGG + chr2_1:76819911-76819930 None:intergenic 25.0%
! AAATATAGTATTTGTGGTGT+TGG - chr2_1:76819910-76819929 Msa0226310:intron 25.0%
! TAATAAGCTTGAGATGATTA+AGG - chr2_1:76819995-76820014 Msa0226310:intron 25.0%
!! AACTATGATAAATTCTAGCT+AGG - chr2_1:76820064-76820083 Msa0226310:five_prime_UTR 25.0%
! ATATAGTAGAATACATGTCA+AGG + chr2_1:76820093-76820112 None:intergenic 25.0%
GGTTAAAGAGTTAAAACTCT+TGG + chr2_1:76815028-76815047 None:intergenic 30.0%
GGAGTTTATTTATTCAAGGA+TGG + chr2_1:76815076-76815095 None:intergenic 30.0%
AAACTCAAGAATATTAGTGG+TGG - chr2_1:76815347-76815366 Msa0226310:CDS 30.0%
! GAGATTTGTTCTTTCAAACA+TGG - chr2_1:76815816-76815835 Msa0226310:intron 30.0%
! AAATGTTTGAATGGTAGTGA+AGG - chr2_1:76815921-76815940 Msa0226310:intron 30.0%
!! TTTAGGCCTTTAGAAGTTTT+TGG - chr2_1:76816253-76816272 Msa0226310:CDS 30.0%
!! TTAGGCCTTTAGAAGTTTTT+GGG - chr2_1:76816254-76816273 Msa0226310:CDS 30.0%
ATTTGCCCAAAAACTTCTAA+AGG + chr2_1:76816262-76816281 None:intergenic 30.0%
GGCGATATTATAAAAATCCA+AGG + chr2_1:76816294-76816313 None:intergenic 30.0%
ATGAACACATATGAACTCAA+AGG - chr2_1:76816674-76816693 Msa0226310:CDS 30.0%
TCTTAAAAATATCCCATCAG+AGG + chr2_1:76816759-76816778 None:intergenic 30.0%
! TACCTTTATTACATGATGGA+AGG - chr2_1:76816962-76816981 Msa0226310:CDS 30.0%
ATCCTTCCATCATGTAATAA+AGG + chr2_1:76816967-76816986 None:intergenic 30.0%
ATCAATGGTTGCATAAAGTT+TGG + chr2_1:76817129-76817148 None:intergenic 30.0%
GTGAAAGATGATAATCCTAT+TGG - chr2_1:76817266-76817285 Msa0226310:CDS 30.0%
GAAAGATGATAATCCTATTG+GGG - chr2_1:76817268-76817287 Msa0226310:CDS 30.0%
GTGAATAAAGAACCAATTCA+TGG - chr2_1:76817374-76817393 Msa0226310:CDS 30.0%
ATTAGAAGTCCTAAATTTCC+TGG - chr2_1:76817464-76817483 Msa0226310:CDS 30.0%
AGGCACTTAATATACATTAC+AGG - chr2_1:76817650-76817669 Msa0226310:CDS 30.0%
GGCACTTAATATACATTACA+GGG - chr2_1:76817651-76817670 Msa0226310:CDS 30.0%
ACTTAATATACATTACAGGG+TGG - chr2_1:76817654-76817673 Msa0226310:CDS 30.0%
TGTTTATACTGAGATTTCCT+TGG - chr2_1:76817679-76817698 Msa0226310:CDS 30.0%
! TTAGGGTATTAATGCTTGTT+TGG - chr2_1:76817780-76817799 Msa0226310:CDS 30.0%
! TAGGGTATTAATGCTTGTTT+GGG - chr2_1:76817781-76817800 Msa0226310:CDS 30.0%
GTTCCTCTGTTAAAAAAAGA+TGG - chr2_1:76817818-76817837 Msa0226310:CDS 30.0%
!!! AACCCATCTTTTTTTAACAG+AGG + chr2_1:76817824-76817843 None:intergenic 30.0%
!! GTTAAAAAAAGATGGGTTGA+TGG - chr2_1:76817826-76817845 Msa0226310:CDS 30.0%
! TTTCTGATGATGAGTAAACA+TGG + chr2_1:76817966-76817985 None:intergenic 30.0%
! TCATCATCAGAAAATTTTGG+TGG - chr2_1:76817973-76817992 Msa0226310:CDS 30.0%
CAGCTATTTAGATCTATTGA+CGG - chr2_1:76818376-76818395 Msa0226310:intron 30.0%
GGAAGGATAACATAATAGAT+AGG - chr2_1:76818461-76818480 Msa0226310:intron 30.0%
! TCTTAAGTGAAAGCTCTTTT+GGG + chr2_1:76818627-76818646 None:intergenic 30.0%
! ATCTTAAGTGAAAGCTCTTT+TGG + chr2_1:76818628-76818647 None:intergenic 30.0%
ATATAATCTGAATCAGGTTC+TGG + chr2_1:76818907-76818926 None:intergenic 30.0%
TTACTTACCTATCATCATCT+TGG + chr2_1:76818971-76818990 None:intergenic 30.0%
!! ATTGGAAAGAAAGTGTTAGA+AGG + chr2_1:76819026-76819045 None:intergenic 30.0%
GGTTTGAGTAAAATTCATGT+GGG + chr2_1:76819126-76819145 None:intergenic 30.0%
AGGTTTGAGTAAAATTCATG+TGG + chr2_1:76819127-76819146 None:intergenic 30.0%
! ATTTTCTTGGTGAAGGAAAA+GGG + chr2_1:76819379-76819398 None:intergenic 30.0%
! TATTTTCTTGGTGAAGGAAA+AGG + chr2_1:76819380-76819399 None:intergenic 30.0%
! AAAGGATATTTTCTTGGTGA+AGG + chr2_1:76819386-76819405 None:intergenic 30.0%
ACCAAGAAAATATCCTTTGA+TGG - chr2_1:76819388-76819407 Msa0226310:intron 30.0%
! ACCATCAAAGGATATTTTCT+TGG + chr2_1:76819392-76819411 None:intergenic 30.0%
! AGAAAATATCCTTTGATGGT+AGG - chr2_1:76819392-76819411 Msa0226310:intron 30.0%
GATGATGAATACATAATCGT+CGG - chr2_1:76819455-76819474 Msa0226310:intron 30.0%
AACCCTATCATTTAGCTAAT+AGG - chr2_1:76819546-76819565 Msa0226310:intron 30.0%
TGCCTATTAGCTAAATGATA+GGG + chr2_1:76819551-76819570 None:intergenic 30.0%
TAATGCATTCTTCACTTTCT+GGG + chr2_1:76819655-76819674 None:intergenic 30.0%
CGAAACTAAGTAGTAAGTAT+GGG + chr2_1:76819872-76819891 None:intergenic 30.0%
ACGAAACTAAGTAGTAAGTA+TGG + chr2_1:76819873-76819892 None:intergenic 30.0%
AAAAGAAAAAACAGTTTCGC+AGG + chr2_1:76819966-76819985 None:intergenic 30.0%
GAATAGAACCGAGATATAGT+AGG + chr2_1:76815097-76815116 None:intergenic 35.0%
!! GTAGTTGGTGAATGATGAAT+GGG + chr2_1:76815125-76815144 None:intergenic 35.0%
!! AGTAGTTGGTGAATGATGAA+TGG + chr2_1:76815126-76815145 None:intergenic 35.0%
GAGATGAAAATGAGAGTAGT+TGG + chr2_1:76815140-76815159 None:intergenic 35.0%
CAAAATCGAAGAAGATGAAG+AGG + chr2_1:76815194-76815213 None:intergenic 35.0%
TCTTCATGCTACAATCTTTG+AGG - chr2_1:76815319-76815338 Msa0226310:CDS 35.0%
CAGTTCAAGTCTTTCTGATA+AGG + chr2_1:76815891-76815910 None:intergenic 35.0%
CTAGTTAGTTGGAAGGATAA+AGG - chr2_1:76815945-76815964 Msa0226310:intron 35.0%
! AAAGGGAAAGTGTAAAGAGA+TGG - chr2_1:76816065-76816084 Msa0226310:intron 35.0%
ATGAACTTCTGTCTTATCCA+TGG + chr2_1:76816105-76816124 None:intergenic 35.0%
GATAAGACAGAAGTTCATCA+AGG - chr2_1:76816107-76816126 Msa0226310:intron 35.0%
!!! TGATTGTTTTTGCTCTGTGT+TGG - chr2_1:76816183-76816202 Msa0226310:intron 35.0%
TGAATCTATTTGTCACCTGT+CGG - chr2_1:76816539-76816558 Msa0226310:CDS 35.0%
! TGACCTTTTGTTCATTAAGC+TGG - chr2_1:76816575-76816594 Msa0226310:CDS 35.0%
AGACCAGCTTAATGAACAAA+AGG + chr2_1:76816581-76816600 None:intergenic 35.0%
ACATAGCATATGCAGGATAA+AGG + chr2_1:76816639-76816658 None:intergenic 35.0%
GGATAAAACATAGCATATGC+AGG + chr2_1:76816646-76816665 None:intergenic 35.0%
AACAAACCTGGATCTTTGTT+AGG - chr2_1:76816698-76816717 Msa0226310:CDS 35.0%
AGTCTACCCTAAAATGAACA+AGG + chr2_1:76816828-76816847 None:intergenic 35.0%
!!! TTTTAGGGTAGACTTTTGCT+TGG - chr2_1:76816834-76816853 Msa0226310:CDS 35.0%
TGCACTTATGCTAAAACGAA+GGG + chr2_1:76816864-76816883 None:intergenic 35.0%
ATGCACTTATGCTAAAACGA+AGG + chr2_1:76816865-76816884 None:intergenic 35.0%
CTAACGCATGTAAACATAAG+TGG + chr2_1:76816910-76816929 None:intergenic 35.0%
TCGTGCTTTCTCTAAATCAA+TGG + chr2_1:76817144-76817163 None:intergenic 35.0%
AAGGACCAGAATCATAGAAA+AGG - chr2_1:76817169-76817188 Msa0226310:CDS 35.0%
! ATGCTCCTTTTCTATGATTC+TGG + chr2_1:76817177-76817196 None:intergenic 35.0%
TGAAAAGACTCATTCCATTG+AGG + chr2_1:76817206-76817225 None:intergenic 35.0%
TATGATATCCGATGCCAAAT+GGG + chr2_1:76817240-76817259 None:intergenic 35.0%
ATATGATATCCGATGCCAAA+TGG + chr2_1:76817241-76817260 None:intergenic 35.0%
!! AGATAGGTGGGTTGAAATAT+TGG - chr2_1:76817349-76817368 Msa0226310:CDS 35.0%
CAAAAAATTGCAGCTTCACA+TGG + chr2_1:76817412-76817431 None:intergenic 35.0%
TAAGGAACTCCAGGAAATTT+AGG + chr2_1:76817476-76817495 None:intergenic 35.0%
! CTTTGTGTGTAGAAAGCATA+AGG + chr2_1:76817494-76817513 None:intergenic 35.0%
TATTGGGGACAAAATTGTCT+GGG + chr2_1:76817556-76817575 None:intergenic 35.0%
ATATTGGGGACAAAATTGTC+TGG + chr2_1:76817557-76817576 None:intergenic 35.0%
TTGATGCAATCACAAAAGCA+AGG - chr2_1:76817630-76817649 Msa0226310:CDS 35.0%
ATACTGAGATTTCCTTGGTA+AGG - chr2_1:76817684-76817703 Msa0226310:CDS 35.0%
TACTGAGATTTCCTTGGTAA+GGG - chr2_1:76817685-76817704 Msa0226310:CDS 35.0%
! CTCAAGAAAAAAGCACAAGA+AGG - chr2_1:76817755-76817774 Msa0226310:CDS 35.0%
!! AAAAAGCACAAGAAGGTGTT+AGG - chr2_1:76817762-76817781 Msa0226310:CDS 35.0%
!! AAAAGCACAAGAAGGTGTTA+GGG - chr2_1:76817763-76817782 Msa0226310:CDS 35.0%
TACTCATGATCAAGAAACTG+AGG - chr2_1:76817850-76817869 Msa0226310:CDS 35.0%
! TGGTGCCAATTTCTATATTC+TGG + chr2_1:76817946-76817965 None:intergenic 35.0%
!! TCATCAGAAAATTTTGGTGG+TGG - chr2_1:76817976-76817995 Msa0226310:CDS 35.0%
!! CGAAGAATTGTGAGTTTTGT+AGG - chr2_1:76818034-76818053 Msa0226310:CDS 35.0%
!! AGAATTGTGAGTTTTGTAGG+AGG - chr2_1:76818037-76818056 Msa0226310:CDS 35.0%
TTCGGAAAAGTGAATGAAAC+GGG + chr2_1:76818093-76818112 None:intergenic 35.0%
GTTCGGAAAAGTGAATGAAA+CGG + chr2_1:76818094-76818113 None:intergenic 35.0%
AATAGAAAAAGGTGGTCCTA+GGG - chr2_1:76818168-76818187 Msa0226310:intron 35.0%
AACAAAACATCCCAAGCAAT+GGG + chr2_1:76818229-76818248 None:intergenic 35.0%
AAACAAAACATCCCAAGCAA+TGG + chr2_1:76818230-76818249 None:intergenic 35.0%
! TGTTTAACTTTGAGCAGAGA+TGG - chr2_1:76818245-76818264 Msa0226310:intron 35.0%
CTATTTAGATCTATTGACGG+TGG - chr2_1:76818379-76818398 Msa0226310:intron 35.0%
ATTGTTAGCAAGATTGAAGC+TGG - chr2_1:76818646-76818665 Msa0226310:intron 35.0%
TTGTTAGCAAGATTGAAGCT+GGG - chr2_1:76818647-76818666 Msa0226310:intron 35.0%
AAGAATGTCAAATAGTTCCG+AGG + chr2_1:76818829-76818848 None:intergenic 35.0%
TATTTGACATTCTTCTGCCT+TGG - chr2_1:76818835-76818854 Msa0226310:intron 35.0%
AACATAAATCATGAAACGCC+TGG + chr2_1:76818944-76818963 None:intergenic 35.0%
ATGATTGAGCAATGTTCACA+TGG - chr2_1:76819055-76819074 Msa0226310:intron 35.0%
TGATTGAGCAATGTTCACAT+GGG - chr2_1:76819056-76819075 Msa0226310:intron 35.0%
GAAAAGGAGACCTACTAAAT+AGG + chr2_1:76819090-76819109 None:intergenic 35.0%
!! GGGTCTCAATCATTTTGAAA+AGG + chr2_1:76819106-76819125 None:intergenic 35.0%
!! TAGATAAGTTGGTCCACATT+TGG - chr2_1:76819271-76819290 Msa0226310:intron 35.0%
! CATTGATCTTTGGTTGATGT+TGG + chr2_1:76819486-76819505 None:intergenic 35.0%
CAACATCAACCAAAGATCAA+TGG - chr2_1:76819484-76819503 Msa0226310:intron 35.0%
ATCAACCAAAGATCAATGGA+TGG - chr2_1:76819488-76819507 Msa0226310:intron 35.0%
!! TAGAGACTCTGAAATTGCAA+TGG - chr2_1:76819514-76819533 Msa0226310:intron 35.0%
!! AGAGACTCTGAAATTGCAAT+GGG - chr2_1:76819515-76819534 Msa0226310:intron 35.0%
CTGCCTATTAGCTAAATGAT+AGG + chr2_1:76819552-76819571 None:intergenic 35.0%
CTAATGCATTCTTCACTTTC+TGG + chr2_1:76819656-76819675 None:intergenic 35.0%
CAGAAAGTGAAGAATGCATT+AGG - chr2_1:76819654-76819673 Msa0226310:intron 35.0%
AAGTGAAGAATGCATTAGGA+AGG - chr2_1:76819658-76819677 Msa0226310:intron 35.0%
ACCAGATTGCTGACAAATAT+TGG - chr2_1:76819684-76819703 Msa0226310:intron 35.0%
CCAGATTGCTGACAAATATT+GGG - chr2_1:76819685-76819704 Msa0226310:intron 35.0%
ACTAAGTAGTAAGTATGGGT+GGG + chr2_1:76819868-76819887 None:intergenic 35.0%
AACTAAGTAGTAAGTATGGG+TGG + chr2_1:76819869-76819888 None:intergenic 35.0%
CAATGACTGTAATGGTACAA+TGG - chr2_1:76819939-76819958 Msa0226310:intron 35.0%
GGTGAATGATGAATGGGAAA+AGG + chr2_1:76815119-76815138 None:intergenic 40.0%
TGGTGGTAACATTCTTTCCA+AGG - chr2_1:76815364-76815383 Msa0226310:CDS 40.0%
!! AAGGAAGAAAAGAAGCACCT+TGG + chr2_1:76815384-76815403 None:intergenic 40.0%
! GTAGAGTTTTGCCACTGTTT+TGG - chr2_1:76815756-76815775 Msa0226310:intron 40.0%
TAGAGATGAAGCCAAAACAG+TGG + chr2_1:76815770-76815789 None:intergenic 40.0%
!! GTAGTGAAGGACTAGTTAGT+TGG - chr2_1:76815934-76815953 Msa0226310:intron 40.0%
!! TGAAGGACTAGTTAGTTGGA+AGG - chr2_1:76815938-76815957 Msa0226310:intron 40.0%
! AAGTGTAAAGAGATGGTGGT+TGG - chr2_1:76816072-76816091 Msa0226310:intron 40.0%
! AGTGTAAAGAGATGGTGGTT+GGG - chr2_1:76816073-76816092 Msa0226310:intron 40.0%
ATATCGCCAATTGTATGGCT+AGG - chr2_1:76816306-76816325 Msa0226310:CDS 40.0%
TAGAAGCCTAGCCATACAAT+TGG + chr2_1:76816315-76816334 None:intergenic 40.0%
!!! CATTTTAATTTCAGGCCGAC+AGG + chr2_1:76816557-76816576 None:intergenic 40.0%
GAACTCAAAGGAAACAAACC+TGG - chr2_1:76816686-76816705 Msa0226310:CDS 40.0%
CACAAACCTAACAAAGATCC+AGG + chr2_1:76816707-76816726 None:intergenic 40.0%
ACGACGTACATGGGAAATAA+AGG + chr2_1:76817007-76817026 None:intergenic 40.0%
CAATCAACAACGACGTACAT+GGG + chr2_1:76817016-76817035 None:intergenic 40.0%
ACAATCAACAACGACGTACA+TGG + chr2_1:76817017-76817036 None:intergenic 40.0%
! CAAAACTTTGAGGAGACAGT+TGG - chr2_1:76817086-76817105 Msa0226310:CDS 40.0%
TTTGAGGAGACAGTTGGATT+CGG - chr2_1:76817092-76817111 Msa0226310:CDS 40.0%
! TGATTTAGAGAAAGCACGAG+TGG - chr2_1:76817145-76817164 Msa0226310:CDS 40.0%
! GATTTAGAGAAAGCACGAGT+GGG - chr2_1:76817146-76817165 Msa0226310:CDS 40.0%
! AGGAGCATGTTAATCCTCAA+TGG - chr2_1:76817189-76817208 Msa0226310:CDS 40.0%
TCACATTTACTGTGCCCATT+TGG - chr2_1:76817223-76817242 Msa0226310:CDS 40.0%
AATGTACGCCCTTCCAATTA+AGG + chr2_1:76817297-76817316 None:intergenic 40.0%
!! ATTCCTGTTGAGGAGGTATT+GGG - chr2_1:76817314-76817333 Msa0226310:CDS 40.0%
TGGTGAGGAAATAGATAGGT+GGG - chr2_1:76817337-76817356 Msa0226310:CDS 40.0%
ATGTTTCAAAAGACCGCAAC+TGG - chr2_1:76817432-76817451 Msa0226310:CDS 40.0%
TGTTTCAAAAGACCGCAACT+GGG - chr2_1:76817433-76817452 Msa0226310:CDS 40.0%
! TAGAAAGCATAAGGAACTCC+AGG + chr2_1:76817485-76817504 None:intergenic 40.0%
GCTTTCTACACACAAAGACA+AGG - chr2_1:76817497-76817516 Msa0226310:CDS 40.0%
CACACAAAGACAAGGTTGTA+AGG - chr2_1:76817505-76817524 Msa0226310:CDS 40.0%
! TGTCTGGGATATGAGAATCT+TGG + chr2_1:76817541-76817560 None:intergenic 40.0%
CTCCTGCAAGTTGTATATTG+GGG + chr2_1:76817571-76817590 None:intergenic 40.0%
CCTCCTGCAAGTTGTATATT+GGG + chr2_1:76817572-76817591 None:intergenic 40.0%
ACCTCCTGCAAGTTGTATAT+TGG + chr2_1:76817573-76817592 None:intergenic 40.0%
TTACCAGCCTCATAGATGTT+GGG - chr2_1:76817598-76817617 Msa0226310:CDS 40.0%
TTTCCTTGGTAAGGGATTCA+AGG - chr2_1:76817693-76817712 Msa0226310:CDS 40.0%
! TGTTTGGGATGATAGAACGT+CGG - chr2_1:76817796-76817815 Msa0226310:CDS 40.0%
AGTGAGTTGCCAAATGAAGT+GGG - chr2_1:76818001-76818020 Msa0226310:CDS 40.0%
TCGGAAAAGTGAATGAAACG+GGG + chr2_1:76818092-76818111 None:intergenic 40.0%
!! TCATTCACTTTTCCGAACTC+TGG - chr2_1:76818096-76818115 Msa0226310:CDS 40.0%
TTTCATCAGCCTAACTTTCC+TGG - chr2_1:76818139-76818158 Msa0226310:intron 40.0%
! ATTGAAGCACCAGGAAAGTT+AGG + chr2_1:76818151-76818170 None:intergenic 40.0%
!! CCTTTTTCTATTGAAGCACC+AGG + chr2_1:76818160-76818179 None:intergenic 40.0%
CCTGGTGCTTCAATAGAAAA+AGG - chr2_1:76818157-76818176 Msa0226310:intron 40.0%
GGTGCTTCAATAGAAAAAGG+TGG - chr2_1:76818160-76818179 Msa0226310:intron 40.0%
CAATAGAAAAAGGTGGTCCT+AGG - chr2_1:76818167-76818186 Msa0226310:intron 40.0%
TTAACTTTGAGCAGAGATGG+AGG - chr2_1:76818248-76818267 Msa0226310:intron 40.0%
ATCATCAGGGAAAGTTACTG+GGG + chr2_1:76818338-76818357 None:intergenic 40.0%
GATCATCAGGGAAAGTTACT+GGG + chr2_1:76818339-76818358 None:intergenic 40.0%
TGATCATCAGGGAAAGTTAC+TGG + chr2_1:76818340-76818359 None:intergenic 40.0%
CTAAAGCTGGGCTTATTAGT+GGG - chr2_1:76818440-76818459 Msa0226310:intron 40.0%
GGTATTAAGCCTGAAGACAT+TGG - chr2_1:76818586-76818605 Msa0226310:intron 40.0%
TGTTAGCAAGATTGAAGCTG+GGG - chr2_1:76818648-76818667 Msa0226310:intron 40.0%
AAGGTTCACTGTGTATGTTG+TGG - chr2_1:76818672-76818691 Msa0226310:intron 40.0%
CAGTTCAGGCAATATTAGAC+TGG - chr2_1:76818731-76818750 Msa0226310:intron 40.0%
! TATTGAAGCACTCAATGCCA+AGG - chr2_1:76818789-76818808 Msa0226310:intron 40.0%
! ATTGAAGCACTCAATGCCAA+GGG - chr2_1:76818790-76818809 Msa0226310:intron 40.0%
AATCGTGAGGTGGTAAAACA+AGG - chr2_1:76818859-76818878 Msa0226310:intron 40.0%
GCTCGCATATAATCTGAATC+AGG + chr2_1:76818913-76818932 None:intergenic 40.0%
AGATTATATGCGAGCTCAAG+AGG - chr2_1:76818918-76818937 Msa0226310:intron 40.0%
GTTCATGCCAAGATGATGAT+AGG - chr2_1:76818961-76818980 Msa0226310:intron 40.0%
GGTCTCCTTTCCTATTTAGT+AGG - chr2_1:76819077-76819096 Msa0226310:intron 40.0%
GGAGACCTACTAAATAGGAA+AGG + chr2_1:76819085-76819104 None:intergenic 40.0%
TACTATATGATGAGCGAGTG+AGG + chr2_1:76819147-76819166 None:intergenic 40.0%
CTATGAACTCCTACCATCAA+AGG + chr2_1:76819404-76819423 None:intergenic 40.0%
TAGCACCATCCATTGATCTT+TGG + chr2_1:76819496-76819515 None:intergenic 40.0%
ATTCTTCACTTTCTGGGTGA+AGG + chr2_1:76819649-76819668 None:intergenic 40.0%
CCCAATATTTGTCAGCAATC+TGG + chr2_1:76819688-76819707 None:intergenic 40.0%
TCAGGGAAGAATTCAAATCC+TGG + chr2_1:76819806-76819825 None:intergenic 40.0%
GGTGTGAACAATGACTGTAA+TGG - chr2_1:76819931-76819950 Msa0226310:intron 40.0%
ATGGCGCAAATTCTGCTACA+TGG - chr2_1:76815293-76815312 Msa0226310:three_prime_UTR 45.0%
! GGGAAAGTGTAAAGAGATGG+TGG - chr2_1:76816068-76816087 Msa0226310:intron 45.0%
! AAAGAGATGGTGGTTGGGAT+TGG - chr2_1:76816078-76816097 Msa0226310:intron 45.0%
GGGCAAATGATTCATCACCT+TGG - chr2_1:76816274-76816293 Msa0226310:CDS 45.0%
ATCCTTATCGAAGCCTCTGA+TGG - chr2_1:76816743-76816762 Msa0226310:CDS 45.0%
TCCTTATCGAAGCCTCTGAT+GGG - chr2_1:76816744-76816763 Msa0226310:CDS 45.0%
GAGACAGTTGGATTCGGAAA+AGG - chr2_1:76817098-76817117 Msa0226310:CDS 45.0%
TTACTGTGCCCATTTGGCAT+CGG - chr2_1:76817229-76817248 Msa0226310:CDS 45.0%
CCAATTAAGGTTGCCCCAAT+AGG + chr2_1:76817284-76817303 None:intergenic 45.0%
CCTATTGGGGCAACCTTAAT+TGG - chr2_1:76817281-76817300 Msa0226310:CDS 45.0%
TTGGGGCAACCTTAATTGGA+AGG - chr2_1:76817285-76817304 Msa0226310:CDS 45.0%
TGGGGCAACCTTAATTGGAA+GGG - chr2_1:76817286-76817305 Msa0226310:CDS 45.0%
! CATTCCTGTTGAGGAGGTAT+TGG - chr2_1:76817313-76817332 Msa0226310:CDS 45.0%
TGGGTGGTGAGGAAATAGAT+AGG - chr2_1:76817333-76817352 Msa0226310:CDS 45.0%
GTGGTGAGGAAATAGATAGG+TGG - chr2_1:76817336-76817355 Msa0226310:CDS 45.0%
GTCCCCAATATACAACTTGC+AGG - chr2_1:76817566-76817585 Msa0226310:CDS 45.0%
CCCAATATACAACTTGCAGG+AGG - chr2_1:76817569-76817588 Msa0226310:CDS 45.0%
CTTACCAGCCTCATAGATGT+TGG - chr2_1:76817597-76817616 Msa0226310:CDS 45.0%
ACATCCTCCCAACATCTATG+AGG + chr2_1:76817608-76817627 None:intergenic 45.0%
GAAACTGAGGAATTCTTCCG+AGG - chr2_1:76817863-76817882 Msa0226310:CDS 45.0%
ACAATGCTTCCACCATCATC+CGG + chr2_1:76817923-76817942 None:intergenic 45.0%
CAGTGAGTTGCCAAATGAAG+TGG - chr2_1:76818000-76818019 Msa0226310:CDS 45.0%
ATATCATGCCAAGGTTCCCT+AGG + chr2_1:76818187-76818206 None:intergenic 45.0%
CTTGAGTGGATATCATGCCA+AGG + chr2_1:76818196-76818215 None:intergenic 45.0%
CTTGGCATGATATCCACTCA+AGG - chr2_1:76818194-76818213 Msa0226310:intron 45.0%
GATATCCACTCAAGGCTTGA+AGG - chr2_1:76818202-76818221 Msa0226310:intron 45.0%
TACTGGGGATGGGGTAATAA+TGG + chr2_1:76818323-76818342 None:intergenic 45.0%
TCCACGTCTCTTGATCATCA+GGG + chr2_1:76818351-76818370 None:intergenic 45.0%
TTCCACGTCTCTTGATCATC+AGG + chr2_1:76818352-76818371 None:intergenic 45.0%
CTGAAGATGCTGCTAAAGCT+GGG - chr2_1:76818428-76818447 Msa0226310:intron 45.0%
GCTAAAGCTGGGCTTATTAG+TGG - chr2_1:76818439-76818458 Msa0226310:intron 45.0%
! TGCAAAGCACCAATGTCTTC+AGG + chr2_1:76818598-76818617 None:intergenic 45.0%
TGTATGTTGTGGTTCCCATG+TGG - chr2_1:76818683-76818702 Msa0226310:intron 45.0%
CCTGAACTGATGCACTTTCT+GGG + chr2_1:76818720-76818739 None:intergenic 45.0%
AGGCAATATTAGACTGGCAG+AGG - chr2_1:76818737-76818756 Msa0226310:intron 45.0%
CAATATTAGACTGGCAGAGG+AGG - chr2_1:76818740-76818759 Msa0226310:intron 45.0%
ACTCAATGCCAAGGGAATTG+AGG - chr2_1:76818798-76818817 Msa0226310:intron 45.0%
AGGATCTTCCTCAATTCCCT+TGG + chr2_1:76818809-76818828 None:intergenic 45.0%
AGGGAATTGAGGAAGATCCT+CGG - chr2_1:76818809-76818828 Msa0226310:intron 45.0%
! GAATCAGGTTCTGGTCTTTC+AGG + chr2_1:76818898-76818917 None:intergenic 45.0%
GATGGTAGGAGTTCATAGTG+TGG - chr2_1:76819406-76819425 Msa0226310:intron 45.0%
AGGTTTCTTGAAGCATGCCA+AGG + chr2_1:76819625-76819644 None:intergenic 45.0%
TTCACTTTCTGGGTGAAGGA+AGG + chr2_1:76819645-76819664 None:intergenic 45.0%
TGAATTCTTCCCTGACACCA+AGG - chr2_1:76819811-76819830 Msa0226310:intron 45.0%
AAGTAGTAAGTATGGGTGGG+AGG + chr2_1:76819865-76819884 None:intergenic 45.0%
!! TGAAGCACTGACACAGACAC+CGG - chr2_1:76815510-76815529 Msa0226310:CDS 50.0%
TCCCATCAGAGGCTTCGATA+AGG + chr2_1:76816748-76816767 None:intergenic 50.0%
! TAGAGAAAGCACGAGTGGGA+AGG - chr2_1:76817150-76817169 Msa0226310:CDS 50.0%
! AAGGGCGTACATTCCTGTTG+AGG - chr2_1:76817304-76817323 Msa0226310:CDS 50.0%
TAATGCCTAGAGCCCAGTTG+CGG + chr2_1:76817448-76817467 None:intergenic 50.0%
CCTCCTTGAATCCCTTACCA+AGG + chr2_1:76817699-76817718 None:intergenic 50.0%
CCTTGGTAAGGGATTCAAGG+AGG - chr2_1:76817696-76817715 Msa0226310:CDS 50.0%
TGTCTTATGCCCTCGCAATC+CGG - chr2_1:76817901-76817920 Msa0226310:CDS 50.0%
!! GGAGGCATTGATCTCTGTGA+TGG - chr2_1:76818055-76818074 Msa0226310:CDS 50.0%
GATGTGCTGTGTCCAGAGTT+CGG + chr2_1:76818111-76818130 None:intergenic 50.0%
GCTTGAAGGTCCCATTGCTT+GGG - chr2_1:76818216-76818235 Msa0226310:intron 50.0%
ATGGAGGAAGCAAGGTGGAA+AGG - chr2_1:76818264-76818283 Msa0226310:intron 50.0%
GCATCTTCAAGCTCTCTCAG+AGG + chr2_1:76818301-76818320 None:intergenic 50.0%
AGGGAAAGTTACTGGGGATG+GGG + chr2_1:76818332-76818351 None:intergenic 50.0%
CAGGGAAAGTTACTGGGGAT+GGG + chr2_1:76818333-76818352 None:intergenic 50.0%
TCAGGGAAAGTTACTGGGGA+TGG + chr2_1:76818334-76818353 None:intergenic 50.0%
TCCCTGATGATCAAGAGACG+TGG - chr2_1:76818347-76818366 Msa0226310:intron 50.0%
ATTGACGGTGGAGCAGCTTT+CGG - chr2_1:76818391-76818410 Msa0226310:intron 50.0%
AGCAGCATCTTCAGGAGTCT+CGG + chr2_1:76818422-76818441 None:intergenic 50.0%
! CCAGCTTTAGCAGCATCTTC+AGG + chr2_1:76818430-76818449 None:intergenic 50.0%
CCTGAAGATGCTGCTAAAGC+TGG - chr2_1:76818427-76818446 Msa0226310:intron 50.0%
AGCTGGGCTTATTAGTGGGA+AGG - chr2_1:76818444-76818463 Msa0226310:intron 50.0%
TCCTTGGAAGTTGCTATGCG+TGG - chr2_1:76818554-76818573 Msa0226310:intron 50.0%
TCCACGCATAGCAACTTCCA+AGG + chr2_1:76818558-76818577 None:intergenic 50.0%
GCAAGATTGAAGCTGGGGAA+AGG - chr2_1:76818653-76818672 Msa0226310:intron 50.0%
! CCCAGAAAGTGCATCAGTTC+AGG - chr2_1:76818717-76818736 Msa0226310:intron 50.0%
GCCTGAACTGATGCACTTTC+TGG + chr2_1:76818721-76818740 None:intergenic 50.0%
TTACCACCTCACGATTGCCA+AGG + chr2_1:76818855-76818874 None:intergenic 50.0%
! TCAGGTTCTGGTCTTTCAGG+AGG + chr2_1:76818895-76818914 None:intergenic 50.0%
TAGCTAATAGGCAGCCTGCA+AGG - chr2_1:76819558-76819577 Msa0226310:intron 50.0%
AGCTAATAGGCAGCCTGCAA+GGG - chr2_1:76819559-76819578 Msa0226310:intron 50.0%
ATGGTTTCCGCATGTCGTTG+TGG - chr2_1:76819591-76819610 Msa0226310:intron 50.0%
GCTCATACCACAACGACATG+CGG + chr2_1:76819601-76819620 None:intergenic 50.0%
TCGTTGTGGTATGAGCACCT+TGG - chr2_1:76819605-76819624 Msa0226310:intron 50.0%
ACTCTTGAGCATGATCTCCC+TGG - chr2_1:76819725-76819744 Msa0226310:intron 50.0%
ACCTTCTCCGCTATCCCATT+GGG - chr2_1:76819750-76819769 Msa0226310:intron 50.0%
TGGAAACCCCAATGGGATAG+CGG + chr2_1:76819760-76819779 None:intergenic 50.0%
CCTTCACTGGAAACCCCAAT+GGG + chr2_1:76819767-76819786 None:intergenic 50.0%
TCCTTCACTGGAAACCCCAA+TGG + chr2_1:76819768-76819787 None:intergenic 50.0%
!! TGGTGGTTGGGATTGGTCCA+TGG - chr2_1:76816085-76816104 Msa0226310:intron 55.0%
GGCGTACATTCCTGTTGAGG+AGG - chr2_1:76817307-76817326 Msa0226310:CDS 55.0%
CCACCCAATACCTCCTCAAC+AGG + chr2_1:76817320-76817339 None:intergenic 55.0%
!! CCTGTTGAGGAGGTATTGGG+TGG - chr2_1:76817317-76817336 Msa0226310:CDS 55.0%
!! TGAGGAGGTATTGGGTGGTG+AGG - chr2_1:76817322-76817341 Msa0226310:CDS 55.0%
AAAGACCGCAACTGGGCTCT+AGG - chr2_1:76817440-76817459 Msa0226310:CDS 55.0%
CCTCCCAACATCTATGAGGC+TGG + chr2_1:76817604-76817623 None:intergenic 55.0%
CCAGCCTCATAGATGTTGGG+AGG - chr2_1:76817601-76817620 Msa0226310:CDS 55.0%
GATTCAAGGAGGCCAAAGCC+AGG - chr2_1:76817707-76817726 Msa0226310:CDS 55.0%
GTGATGTCTCCTCCTGGCTT+TGG + chr2_1:76817722-76817741 None:intergenic 55.0%
CCAAGTGTGATGTCTCCTCC+TGG + chr2_1:76817728-76817747 None:intergenic 55.0%
CCAGGAGGAGACATCACACT+TGG - chr2_1:76817725-76817744 Msa0226310:CDS 55.0%
CACAGTGCACTTCAGAGCCT+CGG + chr2_1:76817883-76817902 None:intergenic 55.0%
CACCATCATCCGGATTGCGA+GGG + chr2_1:76817913-76817932 None:intergenic 55.0%
AAGGTGGTCCTAGGGAACCT+TGG - chr2_1:76818176-76818195 Msa0226310:intron 55.0%
TGGGACCTTCAAGCCTTGAG+TGG + chr2_1:76818210-76818229 None:intergenic 55.0%
GGCTTGAAGGTCCCATTGCT+TGG - chr2_1:76818215-76818234 Msa0226310:intron 55.0%
GAGCAGAGATGGAGGAAGCA+AGG - chr2_1:76818256-76818275 Msa0226310:intron 55.0%
CAGAGATGGAGGAAGCAAGG+TGG - chr2_1:76818259-76818278 Msa0226310:intron 55.0%
TTGACGGTGGAGCAGCTTTC+GGG - chr2_1:76818392-76818411 Msa0226310:intron 55.0%
CAGCATCTTCAGGAGTCTCG+GGG + chr2_1:76818420-76818439 None:intergenic 55.0%
GCAGCATCTTCAGGAGTCTC+GGG + chr2_1:76818421-76818440 None:intergenic 55.0%
!! TGCTATGCGTGGAGTGCTGA+TGG - chr2_1:76818565-76818584 Msa0226310:intron 55.0%
AGACTGGCAGAGGAGGACAA+TGG - chr2_1:76818747-76818766 Msa0226310:intron 55.0%
CTTCTGCCTTGGCAATCGTG+AGG - chr2_1:76818846-76818865 Msa0226310:intron 55.0%
ATATGCGAGCTCAAGAGGCC+AGG - chr2_1:76818923-76818942 Msa0226310:intron 55.0%
GCTAATAGGCAGCCTGCAAG+GGG - chr2_1:76819560-76819579 Msa0226310:intron 55.0%
CCATGAATCTGACCCCTTGC+AGG + chr2_1:76819575-76819594 None:intergenic 55.0%
CCTGCAAGGGGTCAGATTCA+TGG - chr2_1:76819572-76819591 Msa0226310:intron 55.0%
!! CAATGGGATAGCGGAGAAGG+TGG + chr2_1:76819751-76819770 None:intergenic 55.0%
CACCTTCTCCGCTATCCCAT+TGG - chr2_1:76819749-76819768 Msa0226310:intron 55.0%
CCTTCTCCGCTATCCCATTG+GGG - chr2_1:76819751-76819770 Msa0226310:intron 55.0%
CCCATTGGGGTTTCCAGTGA+AGG - chr2_1:76819764-76819783 Msa0226310:intron 55.0%
CTCTGTCACGCTTCCTTCAC+TGG + chr2_1:76819780-76819799 None:intergenic 55.0%
!! GAACACGAGCCTTGGTGTCA+GGG + chr2_1:76819823-76819842 None:intergenic 55.0%
!! AGAACACGAGCCTTGGTGTC+AGG + chr2_1:76819824-76819843 None:intergenic 55.0%
GACACCAAGGCTCGTGTTCT+TGG - chr2_1:76819824-76819843 Msa0226310:CDS 55.0%
ACCAAGGCTCGTGTTCTTGG+CGG - chr2_1:76819827-76819846 Msa0226310:CDS 55.0%
! GCACTGACACAGACACCGGA+CGG - chr2_1:76815514-76815533 Msa0226310:CDS 60.0%
TGACACAGACACCGGACGGA+TGG - chr2_1:76815518-76815537 Msa0226310:CDS 60.0%
TGCTGACGTGTCCATCCGTC+CGG + chr2_1:76815532-76815551 None:intergenic 60.0%
TCAAGGAGGCCAAAGCCAGG+AGG - chr2_1:76817710-76817729 Msa0226310:CDS 60.0%
TGCCCTCGCAATCCGGATGA+TGG - chr2_1:76817908-76817927 Msa0226310:CDS 60.0%
CCACCATCATCCGGATTGCG+AGG + chr2_1:76817914-76817933 None:intergenic 60.0%
! CCTCGCAATCCGGATGATGG+TGG - chr2_1:76817911-76817930 Msa0226310:CDS 60.0%
TGTGGTTCCCATGTGGCCTG+AGG - chr2_1:76818690-76818709 Msa0226310:intron 60.0%
GTGGTTCCCATGTGGCCTGA+GGG - chr2_1:76818691-76818710 Msa0226310:intron 60.0%
!! GCACTTTCTGGGACACCCTC+AGG + chr2_1:76818709-76818728 None:intergenic 60.0%
CTGCCTTGGCAATCGTGAGG+TGG - chr2_1:76818849-76818868 Msa0226310:intron 60.0%
!! GATAGCGGAGAAGGTGGCCA+GGG + chr2_1:76819745-76819764 None:intergenic 60.0%
!! CCCCAATGGGATAGCGGAGA+AGG + chr2_1:76819754-76819773 None:intergenic 60.0%
TCCGCCAAGAACACGAGCCT+TGG + chr2_1:76819831-76819850 None:intergenic 60.0%
GGGACACCCTCAGGCCACAT+GGG + chr2_1:76818700-76818719 None:intergenic 65.0%
TGGGACACCCTCAGGCCACA+TGG + chr2_1:76818701-76818720 None:intergenic 65.0%
!! GGATAGCGGAGAAGGTGGCC+AGG + chr2_1:76819746-76819765 None:intergenic 65.0%
! GGAAGCGTGACAGAGCTGCC+AGG - chr2_1:76819785-76819804 Msa0226310:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 76815012 76820189 76815012 ID=Msa0226310;Name=Msa0226310
chr2_1 mRNA 76815012 76820189 76815012 ID=Msa0226310-mRNA-1;Parent=Msa0226310;Name=Msa0226310-mRNA-1;_AED=0.01;_eAED=0.01;_QI=174|1|1|1|0.66|0.5|4|303|809
chr2_1 exon 76815012 76815748 76815012 ID=Msa0226310-mRNA-1:exon:23245;Parent=Msa0226310-mRNA-1
chr2_1 exon 76816219 76818121 76816219 ID=Msa0226310-mRNA-1:exon:23244;Parent=Msa0226310-mRNA-1
chr2_1 exon 76819816 76819915 76819816 ID=Msa0226310-mRNA-1:exon:23243;Parent=Msa0226310-mRNA-1
chr2_1 exon 76820023 76820189 76820023 ID=Msa0226310-mRNA-1:exon:23242;Parent=Msa0226310-mRNA-1
chr2_1 five_prime_UTR 76820023 76820189 76820023 ID=Msa0226310-mRNA-1:five_prime_utr;Parent=Msa0226310-mRNA-1
chr2_1 five_prime_UTR 76819909 76819915 76819909 ID=Msa0226310-mRNA-1:five_prime_utr;Parent=Msa0226310-mRNA-1
chr2_1 CDS 76819816 76819908 76819816 ID=Msa0226310-mRNA-1:cds;Parent=Msa0226310-mRNA-1
chr2_1 CDS 76816219 76818121 76816219 ID=Msa0226310-mRNA-1:cds;Parent=Msa0226310-mRNA-1
chr2_1 CDS 76815315 76815748 76815315 ID=Msa0226310-mRNA-1:cds;Parent=Msa0226310-mRNA-1
chr2_1 three_prime_UTR 76815012 76815314 76815012 ID=Msa0226310-mRNA-1:three_prime_utr;Parent=Msa0226310-mRNA-1
Gene Sequence

>Msa0226310

ATGGCGCAAATTCTGCTACATGGAACTCTTCATGCTACAATCTTTGAGGTCGATAAACTCAAGAATATTAGTGGTGGTAACATTCTTTCCAAGATAAGACAAAACTTTGAGGAGACAGTTGGATTCGGAAAAGGAACTACCAAACTTTATGCAACCATTGATTTAGAGAAAGCACGAGTGGGAAGGACCAGAATCATAGAAAAGGAGCATGTTAATCCTCAATGGAATGAGTCTTTTCACATTTACTGTGCCCATTTGGCATCGGATATCATATTCACTGTGAAAGATGATAATCCTATTGGGGCAACCTTAATTGGAAGGGCGTACATTCCTGTTGAGGAGGTATTGGGTGGTGAGGAAATAGATAGGTGGGTTGAAATATTGGATGTGAATAAAGAACCAATTCATGGAAATTCAAAGATCCATGTGAAGCTGCAATTTTTTGATGTTTCAAAAGACCGCAACTGGGCTCTAGGCATTAGAAGTCCTAAATTTCCTGGAGTTCCTTATGCTTTCTACACACAAAGACAAGGTTGTAAGGTTTCTCTGTACCAAGATTCTCATATCCCAGACAATTTTGTCCCCAATATACAACTTGCAGGAGGTCAGACTTACCAGCCTCATAGATGTTGGGAGGATGTTTTTGATGCAATCACAAAAGCAAGGCACTTAATATACATTACAGGGTGGTCTGTTTATACTGAGATTTCCTTGGTAAGGGATTCAAGGAGGCCAAAGCCAGGAGGAGACATCACACTTGGTGAGCTTCTCAAGAAAAAAGCACAAGAAGGTGTTAGGGTATTAATGCTTGTTTGGGATGATAGAACGTCGGTTCCTCTGTTAAAAAAAGATGGGTTGATGGCTACTCATGATCAAGAAACTGAGGAATTCTTCCGAGGCTCTGAAGTGCACTGTGTCTTATGCCCTCGCAATCCGGATGATGGTGGAAGCATTGTCCAGAATATAGAAATTGGCACCATGTTTACTCATCATCAGAAAATTTTGGTGGTGGACAGTGAGTTGCCAAATGAAGTGGGATTAAATAAACGAAGAATTGTGAGTTTTGTAGGAGGCATTGATCTCTGTGATGGAAGATATGATACCCCGTTTCATTCACTTTTCCGAACTCTGGACACAGCACATCATGATGACTTTCATCAGCCTAACTTTCCTGGTGCTTCAATAGAAAAAGGTGGTCCTAGGGAACCTTGGCATGATATCCACTCAAGGCTTGAAGGTCCCATTGCTTGGGATGTTTTGTTTAACTTTGAGCAGAGATGGAGGAAGCAAGGTGGAAAGGACTTGCTTGTTCCTCTGAGAGAGCTTGAAGATGCCATTATTACCCCATCCCCAGTAACTTTCCCTGATGATCAAGAGACGTGGAATGTTCAGCTATTTAGATCTATTGACGGTGGAGCAGCTTTCGGGTTCCCCGAGACTCCTGAAGATGCTGCTAAAGCTGGGCTTATTAGTGGGAAGGATAACATAATAGATAGGAGTATTCAAGATGCTTATATCAATGCTATTCGACGCGCAAAGAATTTCATCTACATTGAAAATCAATATTTCCTTGGAAGTTGCTATGCGTGGAGTGCTGATGGTATTAAGCCTGAAGACATTGGTGCTTTGCATCTGATCCCAAAAGAGCTTTCACTTAAGATTGTTAGCAAGATTGAAGCTGGGGAAAGGTTCACTGTGTATGTTGTGGTTCCCATGTGGCCTGAGGGTGTCCCAGAAAGTGCATCAGTTCAGGCAATATTAGACTGGCAGAGGAGGACAATGGATATGATGTACAAAGATATTATTGAAGCACTCAATGCCAAGGGAATTGAGGAAGATCCTCGGAACTATTTGACATTCTTCTGCCTTGGCAATCGTGAGGTGGTAAAACAAGGAGAGTACGAGCCTCCTGAAAGACCAGAACCTGATTCAGATTATATGCGAGCTCAAGAGGCCAGGCGTTTCATGATTTATGTTCATGCCAAGATGATGATAGTTGATGATGAATACATAATCGTCGGATCTGCCAACATCAACCAAAGATCAATGGATGGTGCTAGAGACTCTGAAATTGCAATGGGAGCTTATCAACCCTATCATTTAGCTAATAGGCAGCCTGCAAGGGGTCAGATTCATGGTTTCCGCATGTCGTTGTGGTATGAGCACCTTGGCATGCTTCAAGAAACCTTCCTTCACCCAGAAAGTGAAGAATGCATTAGGAAGGTGAACCAGATTGCTGACAAATATTGGGATCTCTATTCTAGCGAGACTCTTGAGCATGATCTCCCTGGCCACCTTCTCCGCTATCCCATTGGGGTTTCCAGTGAAGGAAGCGTGACAGAGCTGCCAGGATTTGAATTCTTCCCTGACACCAAGGCTCGTGTTCTTGGCGGAAAAGTTGATTACCTCCCACCCATACTTACTACTTAG
Protein sequence

>Msa0226310

MAQILLHGTLHATIFEVDKLKNISGGNILSKIRQNFEETVGFGKGTTKLYATIDLEKARVGRTRIIEKEHVNPQWNESFHIYCAHLASDIIFTVKDDNPIGATLIGRAYIPVEEVLGGEEIDRWVEILDVNKEPIHGNSKIHVKLQFFDVSKDRNWALGIRSPKFPGVPYAFYTQRQGCKVSLYQDSHIPDNFVPNIQLAGGQTYQPHRCWEDVFDAITKARHLIYITGWSVYTEISLVRDSRRPKPGGDITLGELLKKKAQEGVRVLMLVWDDRTSVPLLKKDGLMATHDQETEEFFRGSEVHCVLCPRNPDDGGSIVQNIEIGTMFTHHQKILVVDSELPNEVGLNKRRIVSFVGGIDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGASIEKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLVPLRELEDAIITPSPVTFPDDQETWNVQLFRSIDGGAAFGFPETPEDAAKAGLISGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSCYAWSADGIKPEDIGALHLIPKELSLKIVSKIEAGERFTVYVVVPMWPEGVPESASVQAILDWQRRTMDMMYKDIIEALNAKGIEEDPRNYLTFFCLGNREVVKQGEYEPPERPEPDSDYMRAQEARRFMIYVHAKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLANRQPARGQIHGFRMSLWYEHLGMLQETFLHPESEECIRKVNQIADKYWDLYSSETLEHDLPGHLLRYPIGVSSEGSVTELPGFEFFPDTKARVLGGKVDYLPPILTT*