AlfalfaGEDB | Msa0334660

M. sativa cultivar zhongmu-4 / Msa0334660

KEGG: -
GO: -
PFAM: PF03181.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0334660	XP_003596535.2	95.890	219	9	0	45	263	55	273	4.01e-157	447

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0334660	sp\|Q43675\|USP_VICFA	42.060	233	122	5	33	255	35	264	2.97e-55	181

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0334660	G7ITL0	95.890	219	9	0	45	263	55	273	1.92e-157	447

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0019900	Msa0334660	0.807787	4.261819e-50	-8.615850e-47
Msa0025160	Msa0334660	0.856051	4.176264e-62	-8.615850e-47
Msa0033220	Msa0334660	0.812570	3.966607e-51	-8.615850e-47
Msa0035380	Msa0334660	0.806320	8.711331e-50	-8.615850e-47
Msa0038530	Msa0334660	0.816007	6.902877e-52	-8.615850e-47
Msa0044160	Msa0334660	0.803800	2.932301e-49	-8.615850e-47
Msa0072520	Msa0334660	0.846096	2.691876e-59	-8.615850e-47
Msa0176060	Msa0334660	0.827435	1.566858e-54	-8.615850e-47
Msa0183710	Msa0334660	0.808650	2.790835e-50	-8.615850e-47
Msa0199650	Msa0334660	0.800336	1.511864e-48	-8.615850e-47
Msa0203080	Msa0334660	0.820036	8.478771e-53	-8.615850e-47
Msa0246210	Msa0334660	0.800033	1.742144e-48	-8.615850e-47
Msa0284800	Msa0334660	0.872465	3.115252e-67	-8.615850e-47
Msa0330520	Msa0334660	0.855950	4.472860e-62	-8.615850e-47
Msa0334660	Msa0365210	0.800666	1.295089e-48	-8.615850e-47
Msa0334660	Msa0384870	0.822094	2.846586e-53	-8.615850e-47
Msa0334660	Msa0400650	0.821380	4.163485e-53	-8.615850e-47
Msa0334660	Msa0401060	0.810427	1.158986e-50	-8.615850e-47
Msa0334660	Msa0402070	-0.818267	2.143348e-52	-8.615850e-47
Msa0334660	Msa0437520	0.803171	3.960056e-49	-8.615850e-47
Msa0334660	Msa0453040	0.803064	4.165344e-49	-8.615850e-47
Msa0334660	Msa0504720	0.805408	1.354370e-49	-8.615850e-47
Msa0334660	Msa0550050	0.807386	5.184796e-50	-8.615850e-47
Msa0334660	Msa0605560	0.801504	8.729668e-49	-8.615850e-47
Msa0334660	Msa0610690	0.807029	6.172164e-50	-8.615850e-47
Msa0334660	Msa0619710	0.819570	1.083789e-52	-8.615850e-47
Msa0334660	Msa0657710	0.860089	2.634392e-63	-8.615850e-47
Msa0334660	Msa0657720	0.839879	1.216999e-57	-8.615850e-47
Msa0334660	Msa0702790	0.842827	2.038545e-58	-8.615850e-47
Msa0334660	Msa0702800	0.854482	1.195457e-61	-8.615850e-47
Msa0334660	Msa0706150	0.812884	3.386849e-51	-8.615850e-47
Msa0334660	Msa0722890	0.824406	8.214846e-54	-8.615850e-47
Msa0334660	Msa0723090	0.834508	2.878460e-56	-8.615850e-47
Msa0334660	Msa0747000	0.827401	1.596346e-54	-8.615850e-47
Msa0334660	Msa0828950	0.839129	1.905905e-57	-8.615850e-47
Msa0334660	Msa0828960	0.860594	1.853046e-63	-8.615850e-47
Msa0334660	Msa0856220	0.805314	1.416994e-49	-8.615850e-47
Msa0334660	Msa0909260	0.839358	1.662189e-57	-8.615850e-47
Msa0334660	Msa1021590	0.821304	4.335262e-53	-8.615850e-47
Msa0334660	Msa1042300	0.800081	1.703551e-48	-8.615850e-47
Msa0334660	Msa1044250	0.827364	1.629982e-54	-8.615850e-47
Msa0334660	Msa1149910	0.804153	2.476048e-49	-8.615850e-47
Msa0334660	Msa1154320	0.804380	2.221249e-49	-8.615850e-47
Msa0334660	Msa1166190	0.825344	4.933762e-54	-8.615850e-47
Msa0334660	Msa1166290	0.833504	5.133627e-56	-8.615850e-47
Msa0334660	Msa1228630	0.804460	2.136966e-49	-8.615850e-47
Msa0334660	Msa1242130	0.817197	3.735523e-52	-8.615850e-47
Msa0334660	Msa1242160	0.844351	7.979524e-59	-8.615850e-47
Msa0334660	Msa1250610	0.833864	4.174311e-56	-8.615850e-47
Msa0334660	Msa1250660	0.806986	6.300371e-50	-8.615850e-47
Msa0334660	Msa1262590	0.802996	4.303267e-49	-8.615850e-47
Msa0334660	Msa1283930	0.853451	2.368770e-61	-8.615850e-47
Msa0334660	Msa1283960	0.832273	1.038349e-55	-8.615850e-47
Msa0334660	Msa1322960	0.854533	1.155449e-61	-8.615850e-47
Msa0334660	Msa1323070	0.815256	1.014566e-51	-8.615850e-47
Msa0334660	Msa1326640	0.816188	6.288627e-52	-8.615850e-47
Msa0334660	Msa1326680	0.834696	2.581467e-56	-8.615850e-47
Msa0334660	Msa1326710	0.836435	9.373891e-57	-8.615850e-47
Msa0334660	Msa1385260	0.912432	1.960039e-83	-8.615850e-47
Msa0334660	Msa1410160	0.836812	7.513119e-57	-8.615850e-47
Msa0334660	Msa1433360	0.827072	1.914130e-54	-8.615850e-47
Msa0334660	Msa1439250	0.804833	1.786527e-49	-8.615850e-47
Msa0334660	Msa1445530	0.848466	6.020819e-60	-8.615850e-47
Msa0334660	Msa1447100	0.806846	6.746726e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0334660	MtrunA17_Chr2g0318901	95.890	219	9	0	45	263	55	273	3.69e-161	447
Msa0334660	MtrunA17_Chr2g0318871	81.735	219	40	0	45	263	55	273	1.41e-137	388
Msa0334660	MtrunA17_Chr2g0318931	65.877	211	67	2	46	251	62	272	2.64e-99	291
Msa0334660	MtrunA17_Chr8g0355861	48.980	196	92	3	62	250	67	261	6.43e-66	206
Msa0334660	MtrunA17_Chr8g0355321	38.489	278	110	5	33	250	27	303	1.71e-63	201
Msa0334660	MtrunA17_Chr8g0355871	47.449	196	94	3	61	249	29	222	1.49e-62	196
Msa0334660	MtrunA17_Chr1g0168781	42.060	233	122	5	33	255	36	265	1.33e-58	187
Msa0334660	MtrunA17_Chr8g0355311	50.000	170	78	2	86	255	34	196	4.88e-58	183
Msa0334660	MtrunA17_Chr8g0355841	41.102	236	112	4	49	258	284	518	3.36e-56	188
Msa0334660	MtrunA17_Chr8g0355331	47.059	170	83	2	87	256	266	428	7.24e-54	180
Msa0334660	MtrunA17_Chr8g0355831	54.667	150	67	1	101	250	204	352	1.20e-50	169
Msa0334660	MtrunA17_Chr3g0139431	33.603	247	121	10	36	249	85	321	2.40e-34	126
Msa0334660	MtrunA17_Chr1g0146631	34.310	239	125	9	36	248	91	323	1.68e-33	124
Msa0334660	MtrunA17_Chr1g0147331	34.728	239	124	9	36	248	91	323	7.75e-33	122
Msa0334660	MtrunA17_Chr1g0147261	32.609	230	118	9	51	247	72	297	3.34e-31	117
Msa0334660	MtrunA17_Chr1g0147311	32.365	241	129	10	39	248	117	354	1.48e-30	116
Msa0334660	MtrunA17_Chr1g0147291	33.184	223	121	9	52	248	45	265	5.02e-30	113
Msa0334660	MtrunA17_Chr1g0147321	32.456	228	126	9	46	247	10	235	8.50e-30	112
Msa0334660	MtrunA17_Chr1g0147271	31.837	245	133	8	32	248	145	383	1.52e-29	114
Msa0334660	MtrunA17_Chr1g0147301	32.895	228	119	10	52	248	59	283	1.98e-29	112
Msa0334660	MtrunA17_Chr1g0147251	31.081	222	120	6	53	247	25	240	1.04e-28	109
Msa0334660	MtrunA17_Chr1g0147241	32.273	220	123	9	53	247	92	310	1.28e-26	105
Msa0334660	MtrunA17_Chr3g0144421	29.817	218	120	9	63	249	87	302	3.56e-20	87.8
Msa0334660	MtrunA17_Chr4g0034821	29.018	224	119	10	63	251	75	293	1.84e-18	83.2
Msa0334660	MtrunA17_Chr3g0138231	31.507	146	90	4	116	251	123	268	2.12e-16	77.0
Msa0334660	MtrunA17_Chr3g0144391	28.509	228	135	9	50	249	278	505	1.44e-15	75.9
Msa0334660	MtrunA17_Chr3g0144451	28.125	224	121	9	63	251	59	277	2.63e-15	73.9
Msa0334660	MtrunA17_Chr3g0144411	29.204	226	130	10	53	249	314	538	3.37e-15	75.1
Msa0334660	MtrunA17_Chr4g0034731	33.566	143	83	5	119	249	290	432	1.52e-14	72.8
Msa0334660	MtrunA17_Chr4g0034451	32.653	147	85	6	116	249	381	526	1.80e-14	72.8
Msa0334660	MtrunA17_Chr4g0034721	34.459	148	75	6	119	249	434	576	3.81e-14	72.0
Msa0334660	MtrunA17_Chr4g0076231	27.586	145	94	5	113	247	13	156	5.33e-12	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0334660	AT5G25610.1	33.645	214	113	8	63	247	176	389	6.60e-29	113
Msa0334660	AT1G49320.1	33.974	156	81	7	111	248	127	278	1.01e-15	75.5

Find 50 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGTCATTTCCTTGGAAATA+AGG	0.195752	2_4:-53292586	Msa0334660:CDS
AAATCCTTAGGAACATTAAT+TGG	0.198984	2_4:-53292918	Msa0334660:CDS
GCAAAGATTGTGCCTCTTTA+GGG	0.226798	2_4:+53292373	None:intergenic
TTATTAACAGGTGTTGAAAT+TGG	0.238704	2_4:-53293173	Msa0334660:intron
AGCAAAGATTGTGCCTCTTT+AGG	0.246185	2_4:+53292372	None:intergenic
ATGTTATAATATAATGAAAA+TGG	0.261104	2_4:-53292332	Msa0334660:three_prime_UTR
GACAATAAAATACAACCTTT+TGG	0.266567	2_4:+53292763	None:intergenic
CGTCCCTTTGCACAACCTTT+TGG	0.281924	2_4:-53293050	Msa0334660:CDS
TCCATTGTTGATTGCAAGAA+TGG	0.315498	2_4:-53294005	Msa0334660:CDS
TGGTGCCAATGTTGCTGTTT+AGG	0.323097	2_4:-53292523	Msa0334660:exon
GCATTGTCCAAACCTAAATT+AGG	0.363667	2_4:+53292549	None:intergenic
GTTTGTCATGCTGATACTTC+AGG	0.375794	2_4:-53292666	Msa0334660:CDS
GGATTTGCAATTTCTAAGCT+TGG	0.400873	2_4:-53292897	Msa0334660:CDS
ATAGATTCAGTGCAAAATCT+TGG	0.402265	2_4:-53292819	Msa0334660:CDS
AAACCTGTTTGTCATTTCCT+TGG	0.406653	2_4:-53292594	Msa0334660:CDS
TTGTTCATGTTTATCTATGA+AGG	0.411973	2_4:+53292848	None:intergenic
TATGAACATGAGCTTTATCC+AGG	0.416684	2_4:-53293101	Msa0334660:CDS
ATGGGTACCTAATTTAGGTT+TGG	0.424424	2_4:-53292556	Msa0334660:CDS
AGAAAGCAGTGATGTGTCAT+AGG	0.434072	2_4:-53292794	Msa0334660:CDS
CCATTGTTGATTGCAAGAAT+GGG	0.443788	2_4:-53294004	Msa0334660:CDS
TTTCCAAGGAAATGACAAAC+AGG	0.462441	2_4:+53292591	None:intergenic
CTAGCTAATTAAGCTAGAGT+TGG	0.466469	2_4:-53292416	Msa0334660:three_prime_UTR
CAGAGAGAACTGAAATGAAA+AGG	0.473645	2_4:+53293966	None:intergenic
GTTCCATCATTTGCCACCAA+TGG	0.478916	2_4:+53292708	None:intergenic
ACACCAAAAGGTTGTGCAAA+GGG	0.481077	2_4:+53293047	None:intergenic
TTGTGTGTCGTCAACTTCCA+TGG	0.482354	2_4:+53293142	None:intergenic
AAATCCAATTAATGTTCCTA+AGG	0.483573	2_4:+53292914	None:intergenic
TTAGGTTTGGACAATGCCTA+TGG	0.494021	2_4:-53292543	Msa0334660:CDS
GGAGTACTCTCCATCATGGT+TGG	0.497653	2_4:-53292502	Msa0334660:three_prime_UTR
ATAAAATAGCCTTATTTCCA+AGG	0.498608	2_4:+53292577	None:intergenic
ATCCATGTATAAACACCAAA+AGG	0.505299	2_4:+53293035	None:intergenic
GTTCCATTGGTGGCAAATGA+TGG	0.508291	2_4:-53292711	Msa0334660:CDS
TCATAGGTTGAATTTCCAAA+AGG	0.512621	2_4:-53292778	Msa0334660:CDS
CAGATTATGAAAGCTGATCC+TGG	0.522799	2_4:-53292621	Msa0334660:CDS
CCCATTCTTGCAATCAACAA+TGG	0.538082	2_4:+53294004	None:intergenic
TTTAGGAGTACTCTCCATCA+TGG	0.550450	2_4:-53292506	Msa0334660:exon
GAACTGAAATGAAAAGGAGA+AGG	0.556891	2_4:+53293972	None:intergenic
ATTTATGTTACACAATGCCA+TGG	0.562016	2_4:+53292474	None:intergenic
AACAGCAACATTGGCACCAT+AGG	0.567015	2_4:+53292527	None:intergenic
GTACTCCTAAACAGCAACAT+TGG	0.581094	2_4:+53292518	None:intergenic
AGAAGGATACACATTTAATG+AGG	0.587845	2_4:-53292988	Msa0334660:CDS
AACACCAAAAGGTTGTGCAA+AGG	0.591897	2_4:+53293046	None:intergenic
TGTCGTCAACTTCCATGGGT+AGG	0.608273	2_4:+53293147	None:intergenic
TGACAAACAGGTTTACTACC+AGG	0.616609	2_4:+53292603	None:intergenic
GTAAAGAAAGCACCTGCAGA+AGG	0.623014	2_4:-53292960	Msa0334660:CDS
CATGGTGTGTCCAACCATGA+TGG	0.623792	2_4:+53292492	None:intergenic
TGTGTGTCGTCAACTTCCAT+GGG	0.627833	2_4:+53293143	None:intergenic
CATCATGGTTGGACACACCA+TGG	0.652600	2_4:-53292491	Msa0334660:three_prime_UTR
TGAAATTGGTGACCTACCCA+TGG	0.656103	2_4:-53293159	Msa0334660:CDS
GAGCAAGTGAGCAAGATGTG+AGG	0.689292	2_4:+53294036	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTAAGAAACAATTTAAAATA+TGG	-	chr2_4:53292855-53292874	Msa0334660:CDS	10.0%
!!!	AATTCATTTTTTTTATTAAC+AGG	-	chr2_4:53293516-53293535	Msa0334660:intron	10.0%
!!	ATGTTATAATATAATGAAAA+TGG	-	chr2_4:53294369-53294388	Msa0334660:intron	10.0%
!!!	TTAAGAAACAATTTAAAATA+TGG	-	chr2_4:53292855-53292874	Msa0334660:CDS	10.0%
!!!	AATTCATTTTTTTTATTAAC+AGG	-	chr2_4:53293516-53293535	Msa0334660:intron	10.0%
!!	ATGTTATAATATAATGAAAA+TGG	-	chr2_4:53294369-53294388	Msa0334660:intron	10.0%
!!	TATTGGAAATATAAAGATTA+AGG	-	chr2_4:53292322-53292341	Msa0334660:three_prime_UTR	15.0%
!!!	TTAAGGTTTTTATAAAGTTT+CGG	-	chr2_4:53292339-53292358	Msa0334660:three_prime_UTR	15.0%
!!	GCAATTAAATTATTATTTGT+GGG	-	chr2_4:53292877-53292896	Msa0334660:CDS	15.0%
!!	CAATTAAATTATTATTTGTG+GGG	-	chr2_4:53292878-53292897	Msa0334660:CDS	15.0%
!!	AATTAAATTATTATTTGTGG+GGG	-	chr2_4:53292879-53292898	Msa0334660:CDS	15.0%
!!!	TAAATCTAATAGAAGTTTTA+TGG	-	chr2_4:53293489-53293508	Msa0334660:intron	15.0%
!!	TATTGGAAATATAAAGATTA+AGG	-	chr2_4:53292322-53292341	Msa0334660:three_prime_UTR	15.0%
!!!	TTAAGGTTTTTATAAAGTTT+CGG	-	chr2_4:53292339-53292358	Msa0334660:three_prime_UTR	15.0%
!!	GCAATTAAATTATTATTTGT+GGG	-	chr2_4:53292877-53292896	Msa0334660:CDS	15.0%
!!	CAATTAAATTATTATTTGTG+GGG	-	chr2_4:53292878-53292897	Msa0334660:CDS	15.0%
!!	AATTAAATTATTATTTGTGG+GGG	-	chr2_4:53292879-53292898	Msa0334660:CDS	15.0%
!!!	TAAATCTAATAGAAGTTTTA+TGG	-	chr2_4:53293489-53293508	Msa0334660:intron	15.0%
!!!	AATTTTTTTTTTTTGGTGAC+CGG	-	chr2_4:53292492-53292511	Msa0334660:three_prime_UTR	20.0%
!!	GGCAATTAAATTATTATTTG+TGG	-	chr2_4:53292876-53292895	Msa0334660:CDS	20.0%
!!!	ATTTTTTTTAAGTAGTTCAG+TGG	-	chr2_4:53293195-53293214	Msa0334660:intron	20.0%
!!!	GAATTTCATCTTTTTAAATG+AGG	-	chr2_4:53293221-53293240	Msa0334660:intron	20.0%
!!	ACAAATGATGTCTTAATATA+AGG	+	chr2_4:53293406-53293425	None:intergenic	20.0%
!!!	TTGTTTGAAACTTTTAAGAT+AGG	-	chr2_4:53293422-53293441	Msa0334660:intron	20.0%
!!	ACTATCTTAAATTTAAAGAC+AGG	-	chr2_4:53293445-53293464	Msa0334660:intron	20.0%
!!!	TGTTCATAGAAAAAAGTTTT+TGG	+	chr2_4:53293588-53293607	None:intergenic	20.0%
!!	ATTAAAGACATTGAAAAAGA+AGG	-	chr2_4:53293696-53293715	Msa0334660:intron	20.0%
!!!	TTTTATTGTCATGAAATTCA+TGG	-	chr2_4:53293951-53293970	Msa0334660:intron	20.0%
!!	GAAAAAAAAATTCTACAATG+AGG	+	chr2_4:53294401-53294420	None:intergenic	20.0%
!!!	AATTTTTTTTTTTTGGTGAC+CGG	-	chr2_4:53292492-53292511	Msa0334660:three_prime_UTR	20.0%
!!	GGCAATTAAATTATTATTTG+TGG	-	chr2_4:53292876-53292895	Msa0334660:CDS	20.0%
!!!	ATTTTTTTTAAGTAGTTCAG+TGG	-	chr2_4:53293195-53293214	Msa0334660:intron	20.0%
!!!	GAATTTCATCTTTTTAAATG+AGG	-	chr2_4:53293221-53293240	Msa0334660:intron	20.0%
!!	ACAAATGATGTCTTAATATA+AGG	+	chr2_4:53293406-53293425	None:intergenic	20.0%
!!!	TTGTTTGAAACTTTTAAGAT+AGG	-	chr2_4:53293422-53293441	Msa0334660:intron	20.0%
!!	ACTATCTTAAATTTAAAGAC+AGG	-	chr2_4:53293445-53293464	Msa0334660:intron	20.0%
!!!	TGTTCATAGAAAAAAGTTTT+TGG	+	chr2_4:53293588-53293607	None:intergenic	20.0%
!!	ATTAAAGACATTGAAAAAGA+AGG	-	chr2_4:53293696-53293715	Msa0334660:intron	20.0%
!!!	TTTTATTGTCATGAAATTCA+TGG	-	chr2_4:53293951-53293970	Msa0334660:intron	20.0%
!!	GAAAAAAAAATTCTACAATG+AGG	+	chr2_4:53294401-53294420	None:intergenic	20.0%
!	AAAAAAGAATCCAATATGCT+TGG	-	chr2_4:53292288-53292307	Msa0334660:three_prime_UTR	25.0%
!!!	ATTTTTTTTTTTTGGTGACC+GGG	-	chr2_4:53292493-53292512	Msa0334660:three_prime_UTR	25.0%
!!	ATAGGTTGAATGACTTATAT+AGG	+	chr2_4:53292637-53292656	None:intergenic	25.0%
!	AATCTTTATGAGCATAACTT+AGG	+	chr2_4:53293297-53293316	None:intergenic	25.0%
!!!	TTATTAACAGGTGTTGAAAT+TGG	-	chr2_4:53293528-53293547	Msa0334660:intron	25.0%
!!	AAATTTTGTGCAAAATCCTT+AGG	-	chr2_4:53293771-53293790	Msa0334660:intron	25.0%
!	AAATCCTTAGGAACATTAAT+TGG	-	chr2_4:53293783-53293802	Msa0334660:intron	25.0%
!	AAATCCAATTAATGTTCCTA+AGG	+	chr2_4:53293790-53293809	None:intergenic	25.0%
!	TTGTTCATGTTTATCTATGA+AGG	+	chr2_4:53293856-53293875	None:intergenic	25.0%
!!	GACAATAAAATACAACCTTT+TGG	+	chr2_4:53293941-53293960	None:intergenic	25.0%
!!!	ATAAAATAGCCTTATTTCCA+AGG	+	chr2_4:53294127-53294146	None:intergenic	25.0%
!!!	TTGGAAATAAGGCTATTTTA+TGG	-	chr2_4:53294126-53294145	Msa0334660:intron	25.0%
!!!	TGGAAATAAGGCTATTTTAT+GGG	-	chr2_4:53294127-53294146	Msa0334660:intron	25.0%
!!	ATTTTATGGGTACCTAATTT+AGG	-	chr2_4:53294140-53294159	Msa0334660:intron	25.0%
!!	TTTCGTGAGTAAATGTTTTT+AGG	-	chr2_4:53294417-53294436	Msa0334660:intron	25.0%
!!!	TTCGTGAGTAAATGTTTTTA+GGG	-	chr2_4:53294418-53294437	Msa0334660:intron	25.0%
!!!	TTTTTAGGGCTAAAAATGTT+TGG	-	chr2_4:53294432-53294451	Msa0334660:intron	25.0%
!!!	TTTTAGGGCTAAAAATGTTT+GGG	-	chr2_4:53294433-53294452	Msa0334660:intron	25.0%
!	AAAAAAGAATCCAATATGCT+TGG	-	chr2_4:53292288-53292307	Msa0334660:three_prime_UTR	25.0%
!!!	ATTTTTTTTTTTTGGTGACC+GGG	-	chr2_4:53292493-53292512	Msa0334660:three_prime_UTR	25.0%
!!	ATAGGTTGAATGACTTATAT+AGG	+	chr2_4:53292637-53292656	None:intergenic	25.0%
!	AATCTTTATGAGCATAACTT+AGG	+	chr2_4:53293297-53293316	None:intergenic	25.0%
!!!	TTATTAACAGGTGTTGAAAT+TGG	-	chr2_4:53293528-53293547	Msa0334660:intron	25.0%
!!	AAATTTTGTGCAAAATCCTT+AGG	-	chr2_4:53293771-53293790	Msa0334660:intron	25.0%
!	AAATCCTTAGGAACATTAAT+TGG	-	chr2_4:53293783-53293802	Msa0334660:intron	25.0%
!	AAATCCAATTAATGTTCCTA+AGG	+	chr2_4:53293790-53293809	None:intergenic	25.0%
!	TTGTTCATGTTTATCTATGA+AGG	+	chr2_4:53293856-53293875	None:intergenic	25.0%
!!	GACAATAAAATACAACCTTT+TGG	+	chr2_4:53293941-53293960	None:intergenic	25.0%
!!!	ATAAAATAGCCTTATTTCCA+AGG	+	chr2_4:53294127-53294146	None:intergenic	25.0%
!!!	TTGGAAATAAGGCTATTTTA+TGG	-	chr2_4:53294126-53294145	Msa0334660:intron	25.0%
!!!	TGGAAATAAGGCTATTTTAT+GGG	-	chr2_4:53294127-53294146	Msa0334660:intron	25.0%
!!	ATTTTATGGGTACCTAATTT+AGG	-	chr2_4:53294140-53294159	Msa0334660:intron	25.0%
!!	TTTCGTGAGTAAATGTTTTT+AGG	-	chr2_4:53294417-53294436	Msa0334660:intron	25.0%
!!!	TTCGTGAGTAAATGTTTTTA+GGG	-	chr2_4:53294418-53294437	Msa0334660:intron	25.0%
!!!	TTTTTAGGGCTAAAAATGTT+TGG	-	chr2_4:53294432-53294451	Msa0334660:intron	25.0%
!!!	TTTTAGGGCTAAAAATGTTT+GGG	-	chr2_4:53294433-53294452	Msa0334660:intron	25.0%
	CCAATTGAGTTATACTTACA+GGG	+	chr2_4:53292239-53292258	None:intergenic	30.0%
	CTTGAGTTAAGTTTAACTGA+CGG	-	chr2_4:53292365-53292384	Msa0334660:three_prime_UTR	30.0%
	TTGAGTTAAGTTTAACTGAC+GGG	-	chr2_4:53292366-53292385	Msa0334660:three_prime_UTR	30.0%
!!!	TTTTTTTTTTTTGGTGACCG+GGG	-	chr2_4:53292494-53292513	Msa0334660:three_prime_UTR	30.0%
	GACAATGCATAAAATATGCA+AGG	+	chr2_4:53292533-53292552	None:intergenic	30.0%
	ATATCTAATAAACCGACTAG+TGG	-	chr2_4:53292593-53292612	Msa0334660:CDS	30.0%
!!	AGAATTCTTAAGTGTTGAGA+GGG	+	chr2_4:53292800-53292819	None:intergenic	30.0%
!!	AAGAATTCTTAAGTGTTGAG+AGG	+	chr2_4:53292801-53292820	None:intergenic	30.0%
	TCTCAACACTTAAGAATTCT+TGG	-	chr2_4:53292800-53292819	Msa0334660:CDS	30.0%
	AGTTTATATAGTGCATCAGT+TGG	+	chr2_4:53292836-53292855	None:intergenic	30.0%
	AAATTATTATTTGTGGGGGT+TGG	-	chr2_4:53292883-53292902	Msa0334660:CDS	30.0%
!!!	AACCTTTTGGTGTTTATACA+TGG	-	chr2_4:53293664-53293683	Msa0334660:intron	30.0%
	ATCCATGTATAAACACCAAA+AGG	+	chr2_4:53293669-53293688	None:intergenic	30.0%
	AGAAGGATACACATTTAATG+AGG	-	chr2_4:53293713-53293732	Msa0334660:intron	30.0%
	ATAGATTCAGTGCAAAATCT+TGG	-	chr2_4:53293882-53293901	Msa0334660:intron	30.0%
!	TCATAGGTTGAATTTCCAAA+AGG	-	chr2_4:53293923-53293942	Msa0334660:intron	30.0%
!	TTGTCATTTCCTTGGAAATA+AGG	-	chr2_4:53294115-53294134	Msa0334660:intron	30.0%
	ATTTATGTTACACAATGCCA+TGG	+	chr2_4:53294230-53294249	None:intergenic	30.0%
!	TACTTTTATGTACCCTAAAG+AGG	-	chr2_4:53294316-53294335	Msa0334660:intron	30.0%
	CCAATTGAGTTATACTTACA+GGG	+	chr2_4:53292239-53292258	None:intergenic	30.0%
	CTTGAGTTAAGTTTAACTGA+CGG	-	chr2_4:53292365-53292384	Msa0334660:three_prime_UTR	30.0%
	TTGAGTTAAGTTTAACTGAC+GGG	-	chr2_4:53292366-53292385	Msa0334660:three_prime_UTR	30.0%
!!!	TTTTTTTTTTTTGGTGACCG+GGG	-	chr2_4:53292494-53292513	Msa0334660:three_prime_UTR	30.0%
	GACAATGCATAAAATATGCA+AGG	+	chr2_4:53292533-53292552	None:intergenic	30.0%
	ATATCTAATAAACCGACTAG+TGG	-	chr2_4:53292593-53292612	Msa0334660:CDS	30.0%
!!	AGAATTCTTAAGTGTTGAGA+GGG	+	chr2_4:53292800-53292819	None:intergenic	30.0%
!!	AAGAATTCTTAAGTGTTGAG+AGG	+	chr2_4:53292801-53292820	None:intergenic	30.0%
	TCTCAACACTTAAGAATTCT+TGG	-	chr2_4:53292800-53292819	Msa0334660:CDS	30.0%
	AGTTTATATAGTGCATCAGT+TGG	+	chr2_4:53292836-53292855	None:intergenic	30.0%
	AAATTATTATTTGTGGGGGT+TGG	-	chr2_4:53292883-53292902	Msa0334660:CDS	30.0%
!!!	AACCTTTTGGTGTTTATACA+TGG	-	chr2_4:53293664-53293683	Msa0334660:intron	30.0%
	ATCCATGTATAAACACCAAA+AGG	+	chr2_4:53293669-53293688	None:intergenic	30.0%
	AGAAGGATACACATTTAATG+AGG	-	chr2_4:53293713-53293732	Msa0334660:intron	30.0%
	ATAGATTCAGTGCAAAATCT+TGG	-	chr2_4:53293882-53293901	Msa0334660:intron	30.0%
!	TCATAGGTTGAATTTCCAAA+AGG	-	chr2_4:53293923-53293942	Msa0334660:intron	30.0%
!	TTGTCATTTCCTTGGAAATA+AGG	-	chr2_4:53294115-53294134	Msa0334660:intron	30.0%
	ATTTATGTTACACAATGCCA+TGG	+	chr2_4:53294230-53294249	None:intergenic	30.0%
!	TACTTTTATGTACCCTAAAG+AGG	-	chr2_4:53294316-53294335	Msa0334660:intron	30.0%
	CCCTGTAAGTATAACTCAAT+TGG	-	chr2_4:53292236-53292255	Msa0334660:three_prime_UTR	35.0%
	GCCAATTGAGTTATACTTAC+AGG	+	chr2_4:53292240-53292259	None:intergenic	35.0%
	AAAGAATCCAATATGCTTGG+TGG	-	chr2_4:53292291-53292310	Msa0334660:three_prime_UTR	35.0%
	AAGAATCCAATATGCTTGGT+GGG	-	chr2_4:53292292-53292311	Msa0334660:three_prime_UTR	35.0%
	TGAGTTAAGTTTAACTGACG+GGG	-	chr2_4:53292367-53292386	Msa0334660:three_prime_UTR	35.0%
!	TGAAATTAGCTCAGTTGGTA+TGG	+	chr2_4:53292555-53292574	None:intergenic	35.0%
	AGATGTGAGGTTTGAACTAT+AGG	+	chr2_4:53292655-53292674	None:intergenic	35.0%
!	TCCATTGTTGATTGCAAGAA+TGG	-	chr2_4:53292696-53292715	Msa0334660:CDS	35.0%
!	CCATTGTTGATTGCAAGAAT+GGG	-	chr2_4:53292697-53292716	Msa0334660:CDS	35.0%
	GAACTGAAATGAAAAGGAGA+AGG	+	chr2_4:53292732-53292751	None:intergenic	35.0%
	CAGAGAGAACTGAAATGAAA+AGG	+	chr2_4:53292738-53292757	None:intergenic	35.0%
	ACTGCCTGAAGAAGAATATT+GGG	-	chr2_4:53293066-53293085	Msa0334660:CDS	35.0%
	AAGAATATTGGGAAGCTGTT+TGG	-	chr2_4:53293077-53293096	Msa0334660:CDS	35.0%
	ATGTAATGCAAACAACCTTC+TGG	+	chr2_4:53293151-53293170	None:intergenic	35.0%
	CTTTATGAGCATAACTTAGG+TGG	+	chr2_4:53293294-53293313	None:intergenic	35.0%
!	TATGAACATGAGCTTTATCC+AGG	-	chr2_4:53293600-53293619	Msa0334660:intron	35.0%
!!	TGCACTTTCATTGTTTTTCC+TGG	+	chr2_4:53293621-53293640	None:intergenic	35.0%
!	AATTTTTGTTCTCCTTCTGC+AGG	+	chr2_4:53293756-53293775	None:intergenic	35.0%
	GGATTTGCAATTTCTAAGCT+TGG	-	chr2_4:53293804-53293823	Msa0334660:intron	35.0%
!	TCATGGAACAACAGCTTTTA+TGG	-	chr2_4:53293968-53293987	Msa0334660:CDS	35.0%
!	AACAGCTTTTATGGTTCCAT+TGG	-	chr2_4:53293977-53293996	Msa0334660:CDS	35.0%
!	AAACCTGTTTGTCATTTCCT+TGG	-	chr2_4:53294107-53294126	Msa0334660:intron	35.0%
	TTTCCAAGGAAATGACAAAC+AGG	+	chr2_4:53294113-53294132	None:intergenic	35.0%
!	ATGGGTACCTAATTTAGGTT+TGG	-	chr2_4:53294145-53294164	Msa0334660:intron	35.0%
	GCATTGTCCAAACCTAAATT+AGG	+	chr2_4:53294155-53294174	None:intergenic	35.0%
	CTAGCTAATTAAGCTAGAGT+TGG	-	chr2_4:53294285-53294304	Msa0334660:intron	35.0%
	CCCTGTAAGTATAACTCAAT+TGG	-	chr2_4:53292236-53292255	Msa0334660:three_prime_UTR	35.0%
	GCCAATTGAGTTATACTTAC+AGG	+	chr2_4:53292240-53292259	None:intergenic	35.0%
	AAAGAATCCAATATGCTTGG+TGG	-	chr2_4:53292291-53292310	Msa0334660:three_prime_UTR	35.0%
	AAGAATCCAATATGCTTGGT+GGG	-	chr2_4:53292292-53292311	Msa0334660:three_prime_UTR	35.0%
	TGAGTTAAGTTTAACTGACG+GGG	-	chr2_4:53292367-53292386	Msa0334660:three_prime_UTR	35.0%
!	TGAAATTAGCTCAGTTGGTA+TGG	+	chr2_4:53292555-53292574	None:intergenic	35.0%
	AGATGTGAGGTTTGAACTAT+AGG	+	chr2_4:53292655-53292674	None:intergenic	35.0%
!	TCCATTGTTGATTGCAAGAA+TGG	-	chr2_4:53292696-53292715	Msa0334660:CDS	35.0%
!	CCATTGTTGATTGCAAGAAT+GGG	-	chr2_4:53292697-53292716	Msa0334660:CDS	35.0%
	GAACTGAAATGAAAAGGAGA+AGG	+	chr2_4:53292732-53292751	None:intergenic	35.0%
	CAGAGAGAACTGAAATGAAA+AGG	+	chr2_4:53292738-53292757	None:intergenic	35.0%
	ACTGCCTGAAGAAGAATATT+GGG	-	chr2_4:53293066-53293085	Msa0334660:CDS	35.0%
	AAGAATATTGGGAAGCTGTT+TGG	-	chr2_4:53293077-53293096	Msa0334660:CDS	35.0%
	ATGTAATGCAAACAACCTTC+TGG	+	chr2_4:53293151-53293170	None:intergenic	35.0%
	CTTTATGAGCATAACTTAGG+TGG	+	chr2_4:53293294-53293313	None:intergenic	35.0%
!	TATGAACATGAGCTTTATCC+AGG	-	chr2_4:53293600-53293619	Msa0334660:intron	35.0%
!!	TGCACTTTCATTGTTTTTCC+TGG	+	chr2_4:53293621-53293640	None:intergenic	35.0%
!	AATTTTTGTTCTCCTTCTGC+AGG	+	chr2_4:53293756-53293775	None:intergenic	35.0%
	GGATTTGCAATTTCTAAGCT+TGG	-	chr2_4:53293804-53293823	Msa0334660:intron	35.0%
!	TCATGGAACAACAGCTTTTA+TGG	-	chr2_4:53293968-53293987	Msa0334660:CDS	35.0%
!	AACAGCTTTTATGGTTCCAT+TGG	-	chr2_4:53293977-53293996	Msa0334660:CDS	35.0%
!	AAACCTGTTTGTCATTTCCT+TGG	-	chr2_4:53294107-53294126	Msa0334660:intron	35.0%
	TTTCCAAGGAAATGACAAAC+AGG	+	chr2_4:53294113-53294132	None:intergenic	35.0%
!	ATGGGTACCTAATTTAGGTT+TGG	-	chr2_4:53294145-53294164	Msa0334660:intron	35.0%
	GCATTGTCCAAACCTAAATT+AGG	+	chr2_4:53294155-53294174	None:intergenic	35.0%
	CTAGCTAATTAAGCTAGAGT+TGG	-	chr2_4:53294285-53294304	Msa0334660:intron	35.0%
	TAAACCGACTAGTGGTTACT+CGG	-	chr2_4:53292601-53292620	Msa0334660:CDS	40.0%
	ATGACTTATATAGGCCAGTG+AGG	+	chr2_4:53292628-53292647	None:intergenic	40.0%
	CCCATTCTTGCAATCAACAA+TGG	+	chr2_4:53292700-53292719	None:intergenic	40.0%
	CAATATTCTTCTTCAGGCAG+TGG	+	chr2_4:53293067-53293086	None:intergenic	40.0%
	CACTGCCTGAAGAAGAATAT+TGG	-	chr2_4:53293065-53293084	Msa0334660:CDS	40.0%
	GCTTCCCAATATTCTTCTTC+AGG	+	chr2_4:53293073-53293092	None:intergenic	40.0%
	AGAAGTTCTCGCAAAGAAGT+GGG	+	chr2_4:53293118-53293137	None:intergenic	40.0%
	TAGAAGTTCTCGCAAAGAAG+TGG	+	chr2_4:53293119-53293138	None:intergenic	40.0%
	TGAGCATAACTTAGGTGGTA+GGG	+	chr2_4:53293289-53293308	None:intergenic	40.0%
	ATGAGCATAACTTAGGTGGT+AGG	+	chr2_4:53293290-53293309	None:intergenic	40.0%
	ACACCAAAAGGTTGTGCAAA+GGG	+	chr2_4:53293657-53293676	None:intergenic	40.0%
	AACACCAAAAGGTTGTGCAA+AGG	+	chr2_4:53293658-53293677	None:intergenic	40.0%
	AGAAAGCAGTGATGTGTCAT+AGG	-	chr2_4:53293907-53293926	Msa0334660:intron	40.0%
!	AGCTTTTATGGTTCCATTGG+TGG	-	chr2_4:53293980-53293999	Msa0334660:CDS	40.0%
	GTTTGTCATGCTGATACTTC+AGG	-	chr2_4:53294035-53294054	Msa0334660:CDS	40.0%
	CAGATTATGAAAGCTGATCC+TGG	-	chr2_4:53294080-53294099	Msa0334660:intron	40.0%
	TGACAAACAGGTTTACTACC+AGG	+	chr2_4:53294101-53294120	None:intergenic	40.0%
	TTAGGTTTGGACAATGCCTA+TGG	-	chr2_4:53294158-53294177	Msa0334660:intron	40.0%
	GTACTCCTAAACAGCAACAT+TGG	+	chr2_4:53294186-53294205	None:intergenic	40.0%
!!	TTTAGGAGTACTCTCCATCA+TGG	-	chr2_4:53294195-53294214	Msa0334660:intron	40.0%
	GCAAAGATTGTGCCTCTTTA+GGG	+	chr2_4:53294331-53294350	None:intergenic	40.0%
	AGCAAAGATTGTGCCTCTTT+AGG	+	chr2_4:53294332-53294351	None:intergenic	40.0%
	TAAACCGACTAGTGGTTACT+CGG	-	chr2_4:53292601-53292620	Msa0334660:CDS	40.0%
	ATGACTTATATAGGCCAGTG+AGG	+	chr2_4:53292628-53292647	None:intergenic	40.0%
	CCCATTCTTGCAATCAACAA+TGG	+	chr2_4:53292700-53292719	None:intergenic	40.0%
	CAATATTCTTCTTCAGGCAG+TGG	+	chr2_4:53293067-53293086	None:intergenic	40.0%
	CACTGCCTGAAGAAGAATAT+TGG	-	chr2_4:53293065-53293084	Msa0334660:CDS	40.0%
	GCTTCCCAATATTCTTCTTC+AGG	+	chr2_4:53293073-53293092	None:intergenic	40.0%
	AGAAGTTCTCGCAAAGAAGT+GGG	+	chr2_4:53293118-53293137	None:intergenic	40.0%
	TAGAAGTTCTCGCAAAGAAG+TGG	+	chr2_4:53293119-53293138	None:intergenic	40.0%
	TGAGCATAACTTAGGTGGTA+GGG	+	chr2_4:53293289-53293308	None:intergenic	40.0%
	ATGAGCATAACTTAGGTGGT+AGG	+	chr2_4:53293290-53293309	None:intergenic	40.0%
	ACACCAAAAGGTTGTGCAAA+GGG	+	chr2_4:53293657-53293676	None:intergenic	40.0%
	AACACCAAAAGGTTGTGCAA+AGG	+	chr2_4:53293658-53293677	None:intergenic	40.0%
	AGAAAGCAGTGATGTGTCAT+AGG	-	chr2_4:53293907-53293926	Msa0334660:intron	40.0%
!	AGCTTTTATGGTTCCATTGG+TGG	-	chr2_4:53293980-53293999	Msa0334660:CDS	40.0%
	GTTTGTCATGCTGATACTTC+AGG	-	chr2_4:53294035-53294054	Msa0334660:CDS	40.0%
	CAGATTATGAAAGCTGATCC+TGG	-	chr2_4:53294080-53294099	Msa0334660:intron	40.0%
	TGACAAACAGGTTTACTACC+AGG	+	chr2_4:53294101-53294120	None:intergenic	40.0%
	TTAGGTTTGGACAATGCCTA+TGG	-	chr2_4:53294158-53294177	Msa0334660:intron	40.0%
	GTACTCCTAAACAGCAACAT+TGG	+	chr2_4:53294186-53294205	None:intergenic	40.0%
!!	TTTAGGAGTACTCTCCATCA+TGG	-	chr2_4:53294195-53294214	Msa0334660:intron	40.0%
	GCAAAGATTGTGCCTCTTTA+GGG	+	chr2_4:53294331-53294350	None:intergenic	40.0%
	AGCAAAGATTGTGCCTCTTT+AGG	+	chr2_4:53294332-53294351	None:intergenic	40.0%
	TCTCATCCCACCAAGCATAT+TGG	+	chr2_4:53292301-53292320	None:intergenic	45.0%
	CCTCGTGAAATTAGCTCAGT+TGG	+	chr2_4:53292560-53292579	None:intergenic	45.0%
	CCAACTGAGCTAATTTCACG+AGG	-	chr2_4:53292557-53292576	Msa0334660:CDS	45.0%
!!	CTTAAGTGTTGAGAGGGTCA+TGG	+	chr2_4:53292794-53292813	None:intergenic	45.0%
	TCTCGCAAAGAAGTGGGAAT+GGG	+	chr2_4:53293112-53293131	None:intergenic	45.0%
	TTCTCGCAAAGAAGTGGGAA+TGG	+	chr2_4:53293113-53293132	None:intergenic	45.0%
!!	TTGCGAGAACTTCTAAAGCC+TGG	-	chr2_4:53293124-53293143	Msa0334660:CDS	45.0%
!	TGAAATTGGTGACCTACCCA+TGG	-	chr2_4:53293542-53293561	Msa0334660:intron	45.0%
	TGTGTGTCGTCAACTTCCAT+GGG	+	chr2_4:53293561-53293580	None:intergenic	45.0%
	TTGTGTGTCGTCAACTTCCA+TGG	+	chr2_4:53293562-53293581	None:intergenic	45.0%
!!	GTAAAGAAAGCACCTGCAGA+AGG	-	chr2_4:53293741-53293760	Msa0334660:intron	45.0%
!	GTTCCATTGGTGGCAAATGA+TGG	-	chr2_4:53293990-53294009	Msa0334660:CDS	45.0%
	GTTCCATCATTTGCCACCAA+TGG	+	chr2_4:53293996-53294015	None:intergenic	45.0%
	AACAGCAACATTGGCACCAT+AGG	+	chr2_4:53294177-53294196	None:intergenic	45.0%
!!	TGGTGCCAATGTTGCTGTTT+AGG	-	chr2_4:53294178-53294197	Msa0334660:intron	45.0%
	TCTCATCCCACCAAGCATAT+TGG	+	chr2_4:53292301-53292320	None:intergenic	45.0%
	CCTCGTGAAATTAGCTCAGT+TGG	+	chr2_4:53292560-53292579	None:intergenic	45.0%
	CCAACTGAGCTAATTTCACG+AGG	-	chr2_4:53292557-53292576	Msa0334660:CDS	45.0%
!!	CTTAAGTGTTGAGAGGGTCA+TGG	+	chr2_4:53292794-53292813	None:intergenic	45.0%
	TCTCGCAAAGAAGTGGGAAT+GGG	+	chr2_4:53293112-53293131	None:intergenic	45.0%
	TTCTCGCAAAGAAGTGGGAA+TGG	+	chr2_4:53293113-53293132	None:intergenic	45.0%
!!	TTGCGAGAACTTCTAAAGCC+TGG	-	chr2_4:53293124-53293143	Msa0334660:CDS	45.0%
!	TGAAATTGGTGACCTACCCA+TGG	-	chr2_4:53293542-53293561	Msa0334660:intron	45.0%
	TGTGTGTCGTCAACTTCCAT+GGG	+	chr2_4:53293561-53293580	None:intergenic	45.0%
	TTGTGTGTCGTCAACTTCCA+TGG	+	chr2_4:53293562-53293581	None:intergenic	45.0%
!!	GTAAAGAAAGCACCTGCAGA+AGG	-	chr2_4:53293741-53293760	Msa0334660:intron	45.0%
!	GTTCCATTGGTGGCAAATGA+TGG	-	chr2_4:53293990-53294009	Msa0334660:CDS	45.0%
	GTTCCATCATTTGCCACCAA+TGG	+	chr2_4:53293996-53294015	None:intergenic	45.0%
	AACAGCAACATTGGCACCAT+AGG	+	chr2_4:53294177-53294196	None:intergenic	45.0%
!!	TGGTGCCAATGTTGCTGTTT+AGG	-	chr2_4:53294178-53294197	Msa0334660:intron	45.0%
!!!	TATATAGAATTTTTTTTTTT+TGG	-	chr2_4:53292485-53292504	Msa0334660:three_prime_UTR	5.0%
!!!	TATATAGAATTTTTTTTTTT+TGG	-	chr2_4:53292485-53292504	Msa0334660:three_prime_UTR	5.0%
!	GCTTGGTGGGATGAGAGTAT+TGG	-	chr2_4:53292305-53292324	Msa0334660:three_prime_UTR	50.0%
	AGGACCGAGTAACCACTAGT+CGG	+	chr2_4:53292608-53292627	None:intergenic	50.0%
	GAGCAAGTGAGCAAGATGTG+AGG	+	chr2_4:53292668-53292687	None:intergenic	50.0%
	GAGAGGGTCATGGAGATGAA+AGG	+	chr2_4:53292784-53292803	None:intergenic	50.0%
!!	GAAGTGGGAATGGGAGTGTT+GGG	+	chr2_4:53293103-53293122	None:intergenic	50.0%
!	AGAAGTGGGAATGGGAGTGT+TGG	+	chr2_4:53293104-53293123	None:intergenic	50.0%
!!	CTTCTAAAGCCTGGACCAGA+AGG	-	chr2_4:53293133-53293152	Msa0334660:CDS	50.0%
	TGCAAACAACCTTCTGGTCC+AGG	+	chr2_4:53293145-53293164	None:intergenic	50.0%
	AGGAGTCTCGAGCTCAAACA+TGG	-	chr2_4:53293241-53293260	Msa0334660:intron	50.0%
	TGTCGTCAACTTCCATGGGT+AGG	+	chr2_4:53293557-53293576	None:intergenic	50.0%
!	CGTCCCTTTGCACAACCTTT+TGG	-	chr2_4:53293651-53293670	Msa0334660:intron	50.0%
!	GGAGTACTCTCCATCATGGT+TGG	-	chr2_4:53294199-53294218	Msa0334660:intron	50.0%
	CATGGTGTGTCCAACCATGA+TGG	+	chr2_4:53294212-53294231	None:intergenic	50.0%
	CATCATGGTTGGACACACCA+TGG	-	chr2_4:53294210-53294229	Msa0334660:intron	50.0%
!	GCTTGGTGGGATGAGAGTAT+TGG	-	chr2_4:53292305-53292324	Msa0334660:three_prime_UTR	50.0%
	AGGACCGAGTAACCACTAGT+CGG	+	chr2_4:53292608-53292627	None:intergenic	50.0%
	GAGCAAGTGAGCAAGATGTG+AGG	+	chr2_4:53292668-53292687	None:intergenic	50.0%
	GAGAGGGTCATGGAGATGAA+AGG	+	chr2_4:53292784-53292803	None:intergenic	50.0%
!!	GAAGTGGGAATGGGAGTGTT+GGG	+	chr2_4:53293103-53293122	None:intergenic	50.0%
!	AGAAGTGGGAATGGGAGTGT+TGG	+	chr2_4:53293104-53293123	None:intergenic	50.0%
!!	CTTCTAAAGCCTGGACCAGA+AGG	-	chr2_4:53293133-53293152	Msa0334660:CDS	50.0%
	TGCAAACAACCTTCTGGTCC+AGG	+	chr2_4:53293145-53293164	None:intergenic	50.0%
	AGGAGTCTCGAGCTCAAACA+TGG	-	chr2_4:53293241-53293260	Msa0334660:intron	50.0%
	TGTCGTCAACTTCCATGGGT+AGG	+	chr2_4:53293557-53293576	None:intergenic	50.0%
!	CGTCCCTTTGCACAACCTTT+TGG	-	chr2_4:53293651-53293670	Msa0334660:intron	50.0%
!	GGAGTACTCTCCATCATGGT+TGG	-	chr2_4:53294199-53294218	Msa0334660:intron	50.0%
	CATGGTGTGTCCAACCATGA+TGG	+	chr2_4:53294212-53294231	None:intergenic	50.0%
	CATCATGGTTGGACACACCA+TGG	-	chr2_4:53294210-53294229	Msa0334660:intron	50.0%
	AAGGTCCGACTTTCGAACCC+CGG	+	chr2_4:53292514-53292533	None:intergenic	55.0%
	AGTGGTTACTCGGTCCTCAC+TGG	-	chr2_4:53292611-53292630	Msa0334660:CDS	55.0%
	GATGTGCAGCTTGCACTTGC+AGG	-	chr2_4:53293028-53293047	Msa0334660:CDS	55.0%
	CTTCTTCAGGCAGTGGTGCA+TGG	+	chr2_4:53293060-53293079	None:intergenic	55.0%
	AAGGTCCGACTTTCGAACCC+CGG	+	chr2_4:53292514-53292533	None:intergenic	55.0%
	AGTGGTTACTCGGTCCTCAC+TGG	-	chr2_4:53292611-53292630	Msa0334660:CDS	55.0%
	GATGTGCAGCTTGCACTTGC+AGG	-	chr2_4:53293028-53293047	Msa0334660:CDS	55.0%
	CTTCTTCAGGCAGTGGTGCA+TGG	+	chr2_4:53293060-53293079	None:intergenic	55.0%
	GGTGACCGGGGTTCGAAAGT+CGG	-	chr2_4:53292506-53292525	Msa0334660:exon	60.0%
	GGTGACCGGGGTTCGAAAGT+CGG	-	chr2_4:53292506-53292525	Msa0334660:exon	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr2_4	gene	53292208	53294515	53292208	ID=Msa0334660;Name=Msa0334660
chr2_4	mRNA	53292208	53294515	53292208	ID=Msa0334660-mRNA-1;Parent=Msa0334660;Name=Msa0334660-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0\|0\|0.33\|0.66\|0\|0.33\|3\|316\|263
chr2_4	exon	53292208	53293185	53292208	ID=Msa0334660-mRNA-1:exon:16123;Parent=Msa0334660-mRNA-1
chr2_4	exon	53293967	53294064	53293967	ID=Msa0334660-mRNA-1:exon:16122;Parent=Msa0334660-mRNA-1
chr2_4	exon	53294484	53294515	53294484	ID=Msa0334660-mRNA-1:exon:16121;Parent=Msa0334660-mRNA-1
chr2_4	CDS	53294484	53294515	53294484	ID=Msa0334660-mRNA-1:cds;Parent=Msa0334660-mRNA-1
chr2_4	CDS	53293967	53294064	53293967	ID=Msa0334660-mRNA-1:cds;Parent=Msa0334660-mRNA-1
chr2_4	CDS	53292524	53293185	53292524	ID=Msa0334660-mRNA-1:cds;Parent=Msa0334660-mRNA-1
chr2_4	three_prime_UTR	53292208	53292523	53292208	ID=Msa0334660-mRNA-1:three_prime_utr;Parent=Msa0334660-mRNA-1

Gene Sequence

>Msa0334660

ATGAATTGTCAATGCATCAAAATTCAGTCCCTTTCAAACCTCACATCTTGCTCACTTGCTCAGTTACTTTCCATTGTTGATTGCAAGAATGGGATTTCATCACCTTCTCCTTTTCATTTCAGTTCTCTCTGTGTTGAAATTGGTGACCTACCCATGGAAGTTGACGACACACAATATCCAAAAACTTTTTTCTATGAACATGAGCTTTATCCAGGAAAAACAATGAAAGTGCAATTCAGCAAGCGTCCCTTTGCACAACCTTTTGGTGTTTATACATGGATGCGCGAAATTAAAGACATTGAAAAAGAAGGATACACATTTAATGAGGTATGTGTAAAGAAAGCACCTGCAGAAGGAGAACAAAAATTTTGTGCAAAATCCTTAGGAACATTAATTGGATTTGCAATTTCTAAGCTTGGAAAAAATATTCAATCACTTTCAAGCTCCTTCATAGATAAACATGAACAATACAAAATAGATTCAGTGCAAAATCTTGGAGAGAAAGCAGTGATGTGTCATAGGTTGAATTTCCAAAAGGTTGTATTTTATTGTCATGAAATTCATGGAACAACAGCTTTTATGGTTCCATTGGTGGCAAATGATGGAACAAAAACTCAAGCACTAGCTGTTTGTCATGCTGATACTTCAGGCATGAATCATGAAATGCTGCAACAGATTATGAAAGCTGATCCTGGTAGTAAACCTGTTTGTCATTTCCTTGGAAATAAGGCTATTTTATGGGTACCTAATTTAGGTTTGGACAATGCCTATGGTGCCAATGTTGCTGTTTAG

Protein sequence

>Msa0334660

MNCQCIKIQSLSNLTSCSLAQLLSIVDCKNGISSPSPFHFSSLCVEIGDLPMEVDDTQYPKTFFYEHELYPGKTMKVQFSKRPFAQPFGVYTWMREIKDIEKEGYTFNEVCVKKAPAEGEQKFCAKSLGTLIGFAISKLGKNIQSLSSSFIDKHEQYKIDSVQNLGEKAVMCHRLNFQKVVFYCHEIHGTTAFMVPLVANDGTKTQALAVCHADTSGMNHEMLQQIMKADPGSKPVCHFLGNKAILWVPNLGLDNAYGANVAV*