Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0019900 | sp|Q940H3|TBL36_ARATH | 61.579 | 380 | 135 | 5 | 1 | 375 | 1 | 374 | 1.54e-169 | 481 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003080 | Msa0019900 | 0.813302 | 2.741401e-51 | -8.615850e-47 |
| Msa0017670 | Msa0019900 | 0.809607 | 1.740721e-50 | -8.615850e-47 |
| Msa0019900 | Msa0025160 | 0.865042 | 7.867964e-65 | -8.615850e-47 |
| Msa0019900 | Msa0025580 | 0.805650 | 1.205207e-49 | -8.615850e-47 |
| Msa0019900 | Msa0032460 | 0.806381 | 8.457524e-50 | -8.615850e-47 |
| Msa0019900 | Msa0034120 | 0.811357 | 7.289111e-51 | -8.615850e-47 |
| Msa0019900 | Msa0034210 | 0.828167 | 1.045003e-54 | -8.615850e-47 |
| Msa0019900 | Msa0044160 | 0.805326 | 1.409183e-49 | -8.615850e-47 |
| Msa0019900 | Msa0050660 | 0.810824 | 9.512523e-51 | -8.615850e-47 |
| Msa0019900 | Msa0050700 | 0.813116 | 3.012242e-51 | -8.615850e-47 |
| Msa0019900 | Msa0050790 | 0.825197 | 5.344218e-54 | -8.615850e-47 |
| Msa0019900 | Msa0065020 | 0.802983 | 4.330323e-49 | -8.615850e-47 |
| Msa0019900 | Msa0067330 | 0.837183 | 6.040899e-57 | -8.615850e-47 |
| Msa0019900 | Msa0072520 | 0.831685 | 1.451429e-55 | -8.615850e-47 |
| Msa0019900 | Msa0077560 | 0.821448 | 4.015504e-53 | -8.615850e-47 |
| Msa0019900 | Msa0094780 | 0.810863 | 9.329401e-51 | -8.615850e-47 |
| Msa0019900 | Msa0098040 | 0.811470 | 6.890630e-51 | -8.615850e-47 |
| Msa0019900 | Msa0108880 | 0.803912 | 2.779740e-49 | -8.615850e-47 |
| Msa0019900 | Msa0121330 | 0.815816 | 7.617098e-52 | -8.615850e-47 |
| Msa0019900 | Msa0125210 | 0.825025 | 5.870634e-54 | -8.615850e-47 |
| Msa0019900 | Msa0128310 | 0.829557 | 4.816062e-55 | -8.615850e-47 |
| Msa0019900 | Msa0140280 | 0.822994 | 1.758472e-53 | -8.615850e-47 |
| Msa0019900 | Msa0146650 | 0.815653 | 8.281229e-52 | -8.615850e-47 |
| Msa0019900 | Msa0146930 | 0.805734 | 1.156912e-49 | -8.615850e-47 |
| Msa0019900 | Msa0158860 | 0.900341 | 8.075589e-78 | -8.615850e-47 |
| Msa0019900 | Msa0161930 | 0.809439 | 1.891447e-50 | -8.615850e-47 |
| Msa0019900 | Msa0174440 | 0.827253 | 1.732999e-54 | -8.615850e-47 |
| Msa0019900 | Msa0174450 | 0.812081 | 5.073282e-51 | -8.615850e-47 |
| Msa0019900 | Msa0189900 | 0.816080 | 6.650143e-52 | -8.615850e-47 |
| Msa0019900 | Msa0199650 | 0.813376 | 2.640552e-51 | -8.615850e-47 |
| Msa0019900 | Msa0200050 | 0.812703 | 3.709718e-51 | -8.615850e-47 |
| Msa0019900 | Msa0203080 | 0.803618 | 3.198365e-49 | -8.615850e-47 |
| Msa0019900 | Msa0213030 | 0.831580 | 1.540090e-55 | -8.615850e-47 |
| Msa0019900 | Msa0246210 | 0.809063 | 2.277147e-50 | -8.615850e-47 |
| Msa0019900 | Msa0284800 | 0.832145 | 1.117345e-55 | -8.615850e-47 |
| Msa0019900 | Msa0298470 | 0.821600 | 3.703260e-53 | -8.615850e-47 |
| Msa0019900 | Msa0330380 | 0.800704 | 1.271837e-48 | -8.615850e-47 |
| Msa0019900 | Msa0330520 | 0.869640 | 2.660262e-66 | -8.615850e-47 |
| Msa0019900 | Msa0334660 | 0.807787 | 4.261819e-50 | -8.615850e-47 |
| Msa0019900 | Msa0369790 | 0.807409 | 5.126586e-50 | -8.615850e-47 |
| Msa0019900 | Msa0371270 | 0.819309 | 1.243036e-52 | -8.615850e-47 |
| Msa0019900 | Msa0375640 | 0.816676 | 4.892379e-52 | -8.615850e-47 |
| Msa0019900 | Msa0380670 | 0.828025 | 1.130592e-54 | -8.615850e-47 |
| Msa0019900 | Msa0400650 | 0.815854 | 7.467360e-52 | -8.615850e-47 |
| Msa0019900 | Msa0401970 | 0.806159 | 9.420033e-50 | -8.615850e-47 |
| Msa0019900 | Msa0419540 | 0.823449 | 1.377086e-53 | -8.615850e-47 |
| Msa0019900 | Msa0424140 | 0.805855 | 1.091055e-49 | -8.615850e-47 |
| Msa0019900 | Msa0424160 | 0.819725 | 9.987722e-53 | -8.615850e-47 |
| Msa0019900 | Msa0426530 | 0.825530 | 4.458072e-54 | -8.615850e-47 |
| Msa0019900 | Msa0430300 | 0.827300 | 1.687919e-54 | -8.615850e-47 |
| Msa0019900 | Msa0432010 | 0.809055 | 2.285506e-50 | -8.615850e-47 |
| Msa0019900 | Msa0447750 | 0.803066 | 4.162983e-49 | -8.615850e-47 |
| Msa0019900 | Msa0450160 | 0.805757 | 1.144178e-49 | -8.615850e-47 |
| Msa0019900 | Msa0453040 | 0.815875 | 7.388895e-52 | -8.615850e-47 |
| Msa0019900 | Msa0464000 | 0.805757 | 1.144037e-49 | -8.615850e-47 |
| Msa0019900 | Msa0465530 | 0.817067 | 3.996205e-52 | -8.615850e-47 |
| Msa0019900 | Msa0472950 | 0.829033 | 6.453302e-55 | -8.615850e-47 |
| Msa0019900 | Msa0481890 | 0.815640 | 8.336803e-52 | -8.615850e-47 |
| Msa0019900 | Msa0515800 | 0.810810 | 9.579438e-51 | -8.615850e-47 |
| Msa0019900 | Msa0517250 | 0.836064 | 1.164686e-56 | -8.615850e-47 |
| Msa0019900 | Msa0528570 | 0.845719 | 3.407560e-59 | -8.615850e-47 |
| Msa0019900 | Msa0529030 | 0.800763 | 1.236978e-48 | -8.615850e-47 |
| Msa0019900 | Msa0531960 | 0.818824 | 1.602007e-52 | -8.615850e-47 |
| Msa0019900 | Msa0541300 | 0.815005 | 1.153803e-51 | -8.615850e-47 |
| Msa0019900 | Msa0541310 | 0.809159 | 2.171443e-50 | -8.615850e-47 |
| Msa0019900 | Msa0543660 | 0.808585 | 2.880918e-50 | -8.615850e-47 |
| Msa0019900 | Msa0548470 | 0.818794 | 1.627735e-52 | -8.615850e-47 |
| Msa0019900 | Msa0567170 | 0.814649 | 1.383471e-51 | -8.615850e-47 |
| Msa0019900 | Msa0574050 | 0.805839 | 1.099568e-49 | -8.615850e-47 |
| Msa0019900 | Msa0580370 | 0.814905 | 1.214364e-51 | -8.615850e-47 |
| Msa0019900 | Msa0584420 | 0.804577 | 2.020622e-49 | -8.615850e-47 |
| Msa0019900 | Msa0585020 | 0.834292 | 3.260789e-56 | -8.615850e-47 |
| Msa0019900 | Msa0587620 | 0.805993 | 1.020540e-49 | -8.615850e-47 |
| Msa0019900 | Msa0588920 | 0.805122 | 1.554469e-49 | -8.615850e-47 |
| Msa0019900 | Msa0597270 | 0.854777 | 9.817574e-62 | -8.615850e-47 |
| Msa0019900 | Msa0605560 | 0.806295 | 8.816674e-50 | -8.615850e-47 |
| Msa0019900 | Msa0621710 | 0.817539 | 3.129896e-52 | -8.615850e-47 |
| Msa0019900 | Msa0640200 | 0.803616 | 3.202229e-49 | -8.615850e-47 |
| Msa0019900 | Msa0644410 | 0.841898 | 3.592626e-58 | -8.615850e-47 |
| Msa0019900 | Msa0658640 | 0.811739 | 6.022309e-51 | -8.615850e-47 |
| Msa0019900 | Msa0666700 | 0.821306 | 4.329820e-53 | -8.615850e-47 |
| Msa0019900 | Msa0670100 | 0.833344 | 5.629653e-56 | -8.615850e-47 |
| Msa0019900 | Msa0675330 | 0.839464 | 1.560388e-57 | -8.615850e-47 |
| Msa0019900 | Msa0684220 | 0.833986 | 3.891532e-56 | -8.615850e-47 |
| Msa0019900 | Msa0700460 | 0.810884 | 9.232320e-51 | -8.615850e-47 |
| Msa0019900 | Msa0702810 | 0.800268 | 1.560444e-48 | -8.615850e-47 |
| Msa0019900 | Msa0709440 | 0.818100 | 2.337905e-52 | -8.615850e-47 |
| Msa0019900 | Msa0709630 | 0.802224 | 6.210228e-49 | -8.615850e-47 |
| Msa0019900 | Msa0711400 | 0.804591 | 2.006811e-49 | -8.615850e-47 |
| Msa0019900 | Msa0714790 | 0.806481 | 8.053943e-50 | -8.615850e-47 |
| Msa0019900 | Msa0723090 | 0.819886 | 9.175384e-53 | -8.615850e-47 |
| Msa0019900 | Msa0725750 | 0.822777 | 1.975220e-53 | -8.615850e-47 |
| Msa0019900 | Msa0735780 | 0.825421 | 4.732060e-54 | -8.615850e-47 |
| Msa0019900 | Msa0738700 | 0.835287 | 1.832248e-56 | -8.615850e-47 |
| Msa0019900 | Msa0756820 | 0.800603 | 1.333849e-48 | -8.615850e-47 |
| Msa0019900 | Msa0758030 | 0.814903 | 1.215148e-51 | -8.615850e-47 |
| Msa0019900 | Msa0761670 | 0.815231 | 1.027645e-51 | -8.615850e-47 |
| Msa0019900 | Msa0773630 | 0.823115 | 1.647848e-53 | -8.615850e-47 |
| Msa0019900 | Msa0780910 | 0.821388 | 4.145614e-53 | -8.615850e-47 |
| Msa0019900 | Msa0795870 | 0.821965 | 3.049828e-53 | -8.615850e-47 |
| Msa0019900 | Msa0821160 | 0.836732 | 7.874592e-57 | -8.615850e-47 |
| Msa0019900 | Msa0828970 | 0.806846 | 6.746726e-50 | -8.615850e-47 |
| Msa0019900 | Msa0833650 | 0.818192 | 2.228707e-52 | -8.615850e-47 |
| Msa0019900 | Msa0843240 | 0.814927 | 1.200639e-51 | -8.615850e-47 |
| Msa0019900 | Msa0859290 | 0.838791 | 2.331092e-57 | -8.615850e-47 |
| Msa0019900 | Msa0863620 | 0.800083 | 1.701836e-48 | -8.615850e-47 |
| Msa0019900 | Msa0876930 | 0.816901 | 4.354647e-52 | -8.615850e-47 |
| Msa0019900 | Msa0876940 | 0.831420 | 1.686530e-55 | -8.615850e-47 |
| Msa0019900 | Msa0878280 | 0.831477 | 1.633132e-55 | -8.615850e-47 |
| Msa0019900 | Msa0894790 | 0.804892 | 1.736757e-49 | -8.615850e-47 |
| Msa0019900 | Msa0966320 | 0.816077 | 6.658074e-52 | -8.615850e-47 |
| Msa0019900 | Msa0979180 | 0.804986 | 1.660282e-49 | -8.615850e-47 |
| Msa0019900 | Msa1008170 | 0.805094 | 1.575443e-49 | -8.615850e-47 |
| Msa0019900 | Msa1020480 | 0.810210 | 1.291009e-50 | -8.615850e-47 |
| Msa0019900 | Msa1021590 | 0.808291 | 3.329166e-50 | -8.615850e-47 |
| Msa0019900 | Msa1042160 | 0.857550 | 1.512251e-62 | -8.615850e-47 |
| Msa0019900 | Msa1042190 | 0.862626 | 4.435709e-64 | -8.615850e-47 |
| Msa0019900 | Msa1080000 | 0.831842 | 1.326978e-55 | -8.615850e-47 |
| Msa0019900 | Msa1084530 | 0.820707 | 5.950434e-53 | -8.615850e-47 |
| Msa0019900 | Msa1106590 | 0.800130 | 1.665090e-48 | -8.615850e-47 |
| Msa0019900 | Msa1123210 | 0.810975 | 8.820559e-51 | -8.615850e-47 |
| Msa0019900 | Msa1125820 | 0.820434 | 6.872489e-53 | -8.615850e-47 |
| Msa0019900 | Msa1125990 | 0.822544 | 2.238229e-53 | -8.615850e-47 |
| Msa0019900 | Msa1132530 | 0.805936 | 1.049295e-49 | -8.615850e-47 |
| Msa0019900 | Msa1132840 | 0.814925 | 1.201917e-51 | -8.615850e-47 |
| Msa0019900 | Msa1147910 | 0.811759 | 5.960658e-51 | -8.615850e-47 |
| Msa0019900 | Msa1160920 | 0.812903 | 3.353314e-51 | -8.615850e-47 |
| Msa0019900 | Msa1167470 | 0.854651 | 1.067715e-61 | -8.615850e-47 |
| Msa0019900 | Msa1171290 | 0.813077 | 3.072698e-51 | -8.615850e-47 |
| Msa0019900 | Msa1208950 | 0.810483 | 1.127252e-50 | -8.615850e-47 |
| Msa0019900 | Msa1215870 | 0.808354 | 3.228082e-50 | -8.615850e-47 |
| Msa0019900 | Msa1226520 | 0.808448 | 3.082213e-50 | -8.615850e-47 |
| Msa0019900 | Msa1240260 | 0.814631 | 1.396414e-51 | -8.615850e-47 |
| Msa0019900 | Msa1263780 | 0.801196 | 1.009083e-48 | -8.615850e-47 |
| Msa0019900 | Msa1277640 | 0.850036 | 2.201580e-60 | -8.615850e-47 |
| Msa0019900 | Msa1307630 | 0.829265 | 5.671191e-55 | -8.615850e-47 |
| Msa0019900 | Msa1315130 | 0.806692 | 7.271849e-50 | -8.615850e-47 |
| Msa0019900 | Msa1315160 | 0.814479 | 1.509017e-51 | -8.615850e-47 |
| Msa0019900 | Msa1316330 | 0.848088 | 7.658837e-60 | -8.615850e-47 |
| Msa0019900 | Msa1321340 | 0.818177 | 2.246091e-52 | -8.615850e-47 |
| Msa0019900 | Msa1338540 | 0.807529 | 4.833973e-50 | -8.615850e-47 |
| Msa0019900 | Msa1359690 | 0.810950 | 8.931794e-51 | -8.615850e-47 |
| Msa0019900 | Msa1368750 | 0.809519 | 1.818228e-50 | -8.615850e-47 |
| Msa0019900 | Msa1371910 | 0.823031 | 1.723791e-53 | -8.615850e-47 |
| Msa0019900 | Msa1374790 | 0.807550 | 4.784627e-50 | -8.615850e-47 |
| Msa0019900 | Msa1380120 | 0.805225 | 1.479489e-49 | -8.615850e-47 |
| Msa0019900 | Msa1392580 | 0.812830 | 3.479713e-51 | -8.615850e-47 |
| Msa0019900 | Msa1393780 | 0.832700 | 8.140155e-56 | -8.615850e-47 |
| Msa0019900 | Msa1409410 | 0.850109 | 2.099592e-60 | -8.615850e-47 |
| Msa0019900 | Msa1415540 | 0.851715 | 7.407545e-61 | -8.615850e-47 |
| Msa0019900 | Msa1438830 | 0.802246 | 6.145142e-49 | -8.615850e-47 |
| Msa0019900 | Msa1440630 | 0.824404 | 8.220899e-54 | -8.615850e-47 |
| Msa0019900 | Msa1440960 | 0.800497 | 1.401878e-48 | -8.615850e-47 |
| Msa0019900 | Msa1447100 | 0.804511 | 2.085549e-49 | -8.615850e-47 |
| Msa0019900 | Msa1449900 | 0.811976 | 5.348398e-51 | -8.615850e-47 |
| Msa0019900 | Msa1451820 | 0.809719 | 1.646968e-50 | -8.615850e-47 |
| Msa0019900 | Msa1452140 | 0.826919 | 2.083012e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0019900 | MtrunA17_Chr1g0171171 | 97.333 | 375 | 10 | 0 | 1 | 375 | 1 | 375 | 0.0 | 769 |
| Msa0019900 | MtrunA17_Chr1g0210771 | 75.069 | 361 | 85 | 3 | 19 | 375 | 23 | 382 | 0.0 | 580 |
| Msa0019900 | MtrunA17_Chr5g0430371 | 39.601 | 351 | 189 | 5 | 45 | 375 | 52 | 399 | 9.97e-98 | 296 |
| Msa0019900 | MtrunA17_Chr2g0283581 | 41.979 | 374 | 189 | 9 | 9 | 375 | 6 | 358 | 4.05e-95 | 288 |
| Msa0019900 | MtrunA17_Chr2g0325481 | 42.560 | 336 | 173 | 7 | 47 | 375 | 44 | 366 | 1.26e-93 | 284 |
| Msa0019900 | MtrunA17_Chr7g0258851 | 41.449 | 345 | 185 | 6 | 48 | 375 | 243 | 587 | 2.60e-93 | 291 |
| Msa0019900 | MtrunA17_Chr1g0175671 | 40.870 | 345 | 187 | 6 | 48 | 375 | 165 | 509 | 2.17e-91 | 284 |
| Msa0019900 | MtrunA17_Chr3g0097891 | 42.900 | 331 | 170 | 7 | 53 | 375 | 31 | 350 | 6.19e-91 | 277 |
| Msa0019900 | MtrunA17_Chr2g0314801 | 41.791 | 335 | 177 | 5 | 49 | 375 | 29 | 353 | 3.07e-90 | 275 |
| Msa0019900 | MtrunA17_Chr2g0314791 | 43.413 | 334 | 161 | 9 | 53 | 375 | 29 | 345 | 9.84e-90 | 274 |
| Msa0019900 | MtrunA17_Chr3g0105301 | 39.286 | 336 | 189 | 5 | 53 | 375 | 43 | 376 | 6.01e-89 | 273 |
| Msa0019900 | MtrunA17_Chr4g0041011 | 38.933 | 375 | 196 | 10 | 14 | 375 | 9 | 363 | 5.98e-88 | 270 |
| Msa0019900 | MtrunA17_Chr4g0045941 | 39.521 | 334 | 185 | 5 | 48 | 375 | 28 | 350 | 2.52e-87 | 268 |
| Msa0019900 | MtrunA17_Chr4g0071391 | 35.433 | 381 | 219 | 6 | 21 | 375 | 67 | 446 | 2.38e-86 | 268 |
| Msa0019900 | MtrunA17_Chr5g0413851 | 38.158 | 380 | 202 | 10 | 8 | 375 | 1 | 359 | 1.12e-85 | 264 |
| Msa0019900 | MtrunA17_Chr1g0213281 | 36.198 | 384 | 219 | 8 | 17 | 375 | 133 | 515 | 1.83e-85 | 268 |
| Msa0019900 | MtrunA17_Chr4g0006991 | 39.535 | 344 | 189 | 7 | 51 | 375 | 84 | 427 | 2.01e-85 | 265 |
| Msa0019900 | MtrunA17_Chr5g0413271 | 38.323 | 334 | 197 | 4 | 51 | 375 | 143 | 476 | 8.18e-85 | 265 |
| Msa0019900 | MtrunA17_Chr4g0045951 | 40.000 | 335 | 184 | 5 | 47 | 375 | 39 | 362 | 1.02e-84 | 261 |
| Msa0019900 | MtrunA17_Chr7g0269991 | 37.725 | 334 | 186 | 6 | 53 | 371 | 137 | 463 | 2.12e-84 | 264 |
| Msa0019900 | MtrunA17_Chr3g0085081 | 39.589 | 341 | 184 | 6 | 40 | 373 | 21 | 346 | 9.81e-84 | 258 |
| Msa0019900 | MtrunA17_Chr8g0360521 | 40.525 | 343 | 180 | 8 | 53 | 375 | 71 | 409 | 2.17e-83 | 259 |
| Msa0019900 | MtrunA17_Chr3g0091031 | 39.296 | 341 | 185 | 6 | 40 | 373 | 21 | 346 | 3.70e-82 | 254 |
| Msa0019900 | MtrunA17_Chr4g0005491 | 37.322 | 351 | 197 | 9 | 48 | 375 | 57 | 407 | 1.35e-80 | 252 |
| Msa0019900 | MtrunA17_Chr4g0068111 | 36.842 | 342 | 195 | 6 | 53 | 375 | 114 | 453 | 3.02e-80 | 253 |
| Msa0019900 | MtrunA17_Chr3g0085071 | 38.253 | 332 | 186 | 5 | 49 | 373 | 42 | 361 | 6.02e-80 | 249 |
| Msa0019900 | MtrunA17_Chr7g0242701 | 39.130 | 345 | 191 | 7 | 50 | 375 | 83 | 427 | 2.23e-77 | 244 |
| Msa0019900 | MtrunA17_Chr7g0243301 | 34.336 | 399 | 226 | 11 | 10 | 375 | 14 | 409 | 6.20e-77 | 243 |
| Msa0019900 | MtrunA17_Chr3g0113671 | 37.647 | 340 | 191 | 7 | 53 | 371 | 106 | 445 | 7.77e-77 | 244 |
| Msa0019900 | MtrunA17_Chr8g0368461 | 36.544 | 353 | 194 | 7 | 52 | 375 | 177 | 528 | 2.04e-75 | 243 |
| Msa0019900 | MtrunA17_Chr5g0437291 | 37.681 | 345 | 191 | 8 | 51 | 371 | 163 | 507 | 2.72e-74 | 239 |
| Msa0019900 | MtrunA17_Chr2g0287901 | 35.795 | 352 | 196 | 7 | 48 | 375 | 92 | 437 | 1.67e-72 | 233 |
| Msa0019900 | MtrunA17_Chr3g0114101 | 35.673 | 342 | 201 | 7 | 53 | 375 | 89 | 430 | 2.82e-72 | 231 |
| Msa0019900 | MtrunA17_Chr5g0437601 | 33.668 | 398 | 234 | 10 | 8 | 375 | 27 | 424 | 2.98e-72 | 231 |
| Msa0019900 | MtrunA17_Chr4g0005481 | 35.244 | 349 | 206 | 8 | 45 | 375 | 100 | 446 | 7.43e-70 | 226 |
| Msa0019900 | MtrunA17_Chr7g0259711 | 34.746 | 354 | 208 | 6 | 43 | 375 | 81 | 432 | 1.15e-69 | 225 |
| Msa0019900 | MtrunA17_Chr8g0384151 | 32.759 | 348 | 206 | 7 | 44 | 375 | 81 | 416 | 5.74e-62 | 205 |
| Msa0019900 | MtrunA17_Chr3g0126021 | 35.072 | 345 | 196 | 7 | 49 | 375 | 125 | 459 | 6.29e-62 | 206 |
| Msa0019900 | MtrunA17_Chr1g0178081 | 32.832 | 399 | 186 | 13 | 1 | 375 | 1 | 341 | 4.69e-58 | 192 |
| Msa0019900 | MtrunA17_Chr1g0209921 | 39.485 | 233 | 129 | 7 | 50 | 276 | 41 | 267 | 3.39e-55 | 182 |
| Msa0019900 | MtrunA17_Chr8g0347321 | 28.108 | 370 | 231 | 11 | 36 | 375 | 75 | 439 | 4.63e-42 | 152 |
| Msa0019900 | MtrunA17_Chr6g0476041 | 31.383 | 376 | 203 | 16 | 40 | 375 | 154 | 514 | 5.85e-42 | 154 |
| Msa0019900 | MtrunA17_Chr1g0188191 | 30.769 | 377 | 209 | 16 | 36 | 375 | 220 | 581 | 1.68e-39 | 148 |
| Msa0019900 | MtrunA17_Chr8g0384421 | 30.027 | 373 | 217 | 14 | 35 | 375 | 112 | 472 | 1.55e-38 | 143 |
| Msa0019900 | MtrunA17_Chr7g0226991 | 27.920 | 351 | 226 | 7 | 50 | 375 | 54 | 402 | 3.88e-38 | 141 |
| Msa0019900 | MtrunA17_Chr5g0414051 | 28.451 | 355 | 213 | 9 | 53 | 375 | 75 | 420 | 4.61e-38 | 141 |
| Msa0019900 | MtrunA17_Chr4g0049421 | 28.045 | 353 | 216 | 12 | 53 | 375 | 48 | 392 | 3.23e-37 | 139 |
| Msa0019900 | MtrunA17_Chr8g0391481 | 28.333 | 360 | 219 | 11 | 47 | 375 | 21 | 372 | 5.09e-37 | 137 |
| Msa0019900 | MtrunA17_Chr3g0140371 | 27.322 | 366 | 226 | 9 | 40 | 375 | 5 | 360 | 2.34e-36 | 135 |
| Msa0019900 | MtrunA17_Chr4g0070341 | 30.919 | 359 | 209 | 16 | 45 | 375 | 124 | 471 | 6.61e-36 | 136 |
| Msa0019900 | MtrunA17_Chr5g0414061 | 28.846 | 364 | 217 | 13 | 44 | 375 | 85 | 438 | 3.02e-35 | 134 |
| Msa0019900 | MtrunA17_Chr8g0387921 | 26.027 | 365 | 215 | 12 | 50 | 375 | 71 | 419 | 4.76e-34 | 130 |
| Msa0019900 | MtrunA17_Chr2g0283851 | 28.846 | 364 | 192 | 14 | 57 | 375 | 59 | 400 | 1.02e-33 | 129 |
| Msa0019900 | MtrunA17_Chr5g0414091 | 29.132 | 357 | 219 | 12 | 48 | 375 | 80 | 431 | 2.78e-33 | 128 |
| Msa0019900 | MtrunA17_Chr6g0456691 | 25.971 | 412 | 253 | 12 | 4 | 375 | 20 | 419 | 3.34e-32 | 125 |
| Msa0019900 | MtrunA17_Chr6g0456681 | 28.212 | 358 | 225 | 10 | 45 | 375 | 56 | 408 | 4.18e-32 | 125 |
| Msa0019900 | MtrunA17_Chr6g0455901 | 27.764 | 407 | 240 | 17 | 4 | 371 | 21 | 412 | 5.36e-31 | 122 |
| Msa0019900 | MtrunA17_Chr5g0414041 | 30.000 | 360 | 220 | 10 | 44 | 375 | 78 | 433 | 4.45e-30 | 120 |
| Msa0019900 | MtrunA17_Chr6g0451321 | 27.869 | 366 | 207 | 15 | 48 | 375 | 111 | 457 | 2.54e-29 | 118 |
| Msa0019900 | MtrunA17_Chr7g0221291 | 45.833 | 96 | 51 | 1 | 49 | 143 | 75 | 170 | 1.69e-23 | 95.9 |
| Msa0019900 | MtrunA17_Chr7g0221271 | 36.301 | 146 | 85 | 4 | 38 | 178 | 63 | 205 | 6.95e-23 | 95.1 |
| Msa0019900 | MtrunA17_Chr3g0085101 | 36.111 | 108 | 63 | 1 | 238 | 339 | 1 | 108 | 3.78e-17 | 77.0 |
| Msa0019900 | MtrunA17_Chr2g0287931 | 32.773 | 119 | 68 | 2 | 112 | 218 | 2 | 120 | 1.94e-15 | 72.4 |
| Msa0019900 | MtrunA17_Chr1g0209931 | 49.296 | 71 | 28 | 1 | 305 | 375 | 30 | 92 | 2.24e-14 | 68.6 |
| Msa0019900 | MtrunA17_Chr2g0287911 | 46.032 | 63 | 22 | 2 | 48 | 107 | 56 | 109 | 2.91e-12 | 62.8 |
| Msa0019900 | MtrunA17_Chr5g0429191 | 50.000 | 44 | 22 | 0 | 325 | 368 | 2 | 45 | 3.17e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0019900 | AT3G54260.1 | 61.579 | 380 | 135 | 5 | 1 | 375 | 1 | 374 | 1.56e-170 | 481 |
| Msa0019900 | AT2G31110.2 | 39.623 | 371 | 205 | 6 | 13 | 375 | 3 | 362 | 2.47e-93 | 284 |
| Msa0019900 | AT5G06700.1 | 40.870 | 345 | 187 | 6 | 48 | 375 | 250 | 594 | 8.68e-91 | 285 |
| Msa0019900 | AT5G58600.1 | 39.420 | 345 | 192 | 6 | 44 | 375 | 60 | 400 | 1.47e-90 | 278 |
| Msa0019900 | AT1G29050.1 | 39.714 | 350 | 185 | 5 | 41 | 375 | 40 | 378 | 5.59e-90 | 276 |
| Msa0019900 | AT2G30900.1 | 41.667 | 336 | 174 | 8 | 51 | 375 | 41 | 365 | 1.59e-88 | 271 |
| Msa0019900 | AT2G34070.1 | 38.576 | 337 | 189 | 5 | 46 | 375 | 58 | 383 | 6.30e-88 | 271 |
| Msa0019900 | AT3G12060.1 | 40.290 | 345 | 189 | 5 | 48 | 375 | 191 | 535 | 6.55e-88 | 276 |
| Msa0019900 | AT2G42570.1 | 39.940 | 333 | 183 | 5 | 49 | 375 | 43 | 364 | 1.44e-87 | 269 |
| Msa0019900 | AT5G20590.1 | 39.130 | 345 | 192 | 6 | 48 | 375 | 136 | 479 | 3.21e-86 | 270 |
| Msa0019900 | AT5G01360.2 | 38.728 | 346 | 190 | 8 | 51 | 375 | 34 | 378 | 6.11e-85 | 263 |
| Msa0019900 | AT5G49340.1 | 38.398 | 362 | 202 | 8 | 35 | 375 | 80 | 441 | 1.16e-84 | 265 |
| Msa0019900 | AT5G01360.1 | 38.728 | 346 | 190 | 8 | 51 | 375 | 90 | 434 | 2.26e-84 | 263 |
| Msa0019900 | AT3G62390.1 | 36.533 | 375 | 203 | 8 | 23 | 371 | 102 | 467 | 1.52e-83 | 262 |
| Msa0019900 | AT2G30010.1 | 37.838 | 370 | 197 | 8 | 35 | 375 | 31 | 396 | 5.57e-82 | 256 |
| Msa0019900 | AT2G30010.2 | 37.838 | 370 | 197 | 8 | 35 | 375 | 74 | 439 | 1.78e-81 | 256 |
| Msa0019900 | AT1G73140.1 | 39.474 | 342 | 185 | 8 | 53 | 375 | 67 | 405 | 2.31e-81 | 254 |
| Msa0019900 | AT2G40160.2 | 38.040 | 347 | 191 | 9 | 53 | 375 | 77 | 423 | 6.74e-80 | 252 |
| Msa0019900 | AT2G40160.1 | 37.752 | 347 | 192 | 9 | 53 | 375 | 77 | 423 | 1.26e-79 | 251 |
| Msa0019900 | AT1G60790.1 | 36.364 | 352 | 200 | 9 | 46 | 375 | 183 | 532 | 1.53e-79 | 254 |
| Msa0019900 | AT1G78710.1 | 34.897 | 341 | 203 | 7 | 43 | 375 | 28 | 357 | 5.11e-79 | 247 |
| Msa0019900 | AT3G14850.2 | 38.369 | 331 | 188 | 5 | 48 | 371 | 29 | 350 | 8.47e-79 | 246 |
| Msa0019900 | AT2G40150.1 | 37.176 | 347 | 191 | 7 | 52 | 371 | 70 | 416 | 5.84e-78 | 246 |
| Msa0019900 | AT3G55990.1 | 37.719 | 342 | 192 | 7 | 51 | 371 | 138 | 479 | 7.31e-78 | 248 |
| Msa0019900 | AT2G38320.1 | 33.149 | 362 | 219 | 9 | 37 | 375 | 43 | 404 | 1.01e-74 | 238 |
| Msa0019900 | AT5G19160.1 | 36.216 | 370 | 204 | 8 | 32 | 375 | 81 | 444 | 1.22e-74 | 239 |
| Msa0019900 | AT3G11570.1 | 35.859 | 396 | 213 | 12 | 8 | 375 | 37 | 419 | 9.08e-74 | 236 |
| Msa0019900 | AT5G01620.2 | 35.278 | 360 | 211 | 9 | 35 | 375 | 93 | 449 | 2.22e-73 | 235 |
| Msa0019900 | AT5G01620.1 | 35.278 | 360 | 211 | 9 | 35 | 375 | 93 | 449 | 2.22e-73 | 235 |
| Msa0019900 | AT5G01620.3 | 35.278 | 360 | 211 | 9 | 35 | 375 | 101 | 457 | 2.85e-73 | 235 |
| Msa0019900 | AT2G40320.1 | 34.815 | 405 | 218 | 13 | 8 | 375 | 27 | 422 | 1.88e-71 | 229 |
| Msa0019900 | AT5G06230.2 | 38.095 | 357 | 180 | 10 | 50 | 375 | 18 | 364 | 6.03e-71 | 226 |
| Msa0019900 | AT3G06080.2 | 37.037 | 351 | 195 | 7 | 48 | 375 | 98 | 445 | 6.04e-71 | 229 |
| Msa0019900 | AT5G06230.1 | 38.095 | 357 | 180 | 10 | 50 | 375 | 59 | 405 | 1.36e-70 | 227 |
| Msa0019900 | AT3G11030.1 | 35.838 | 346 | 196 | 8 | 53 | 375 | 106 | 448 | 8.74e-70 | 226 |
| Msa0019900 | AT2G31110.3 | 40.230 | 261 | 151 | 4 | 13 | 270 | 3 | 261 | 1.68e-67 | 214 |
| Msa0019900 | AT1G48880.1 | 35.294 | 340 | 188 | 9 | 53 | 375 | 115 | 439 | 3.07e-66 | 216 |
| Msa0019900 | AT2G38320.2 | 33.022 | 321 | 194 | 7 | 76 | 375 | 1 | 321 | 2.06e-65 | 211 |
| Msa0019900 | AT2G30900.2 | 43.043 | 230 | 126 | 5 | 51 | 277 | 41 | 268 | 3.54e-64 | 206 |
| Msa0019900 | AT5G58600.2 | 41.102 | 236 | 133 | 4 | 44 | 277 | 60 | 291 | 2.38e-63 | 204 |
| Msa0019900 | AT3G62390.2 | 37.500 | 272 | 153 | 4 | 23 | 277 | 102 | 373 | 8.51e-63 | 207 |
| Msa0019900 | AT2G34070.2 | 37.308 | 260 | 146 | 4 | 122 | 375 | 1 | 249 | 4.10e-60 | 195 |
| Msa0019900 | AT2G40160.3 | 40.678 | 236 | 129 | 6 | 53 | 277 | 77 | 312 | 5.81e-60 | 196 |
| Msa0019900 | AT5G20590.2 | 39.506 | 243 | 134 | 4 | 48 | 277 | 136 | 378 | 1.63e-57 | 192 |
| Msa0019900 | AT5G19160.2 | 37.066 | 259 | 147 | 4 | 32 | 277 | 81 | 336 | 5.02e-56 | 187 |
| Msa0019900 | AT1G78710.2 | 30.532 | 357 | 180 | 11 | 23 | 375 | 5 | 297 | 5.89e-53 | 177 |
| Msa0019900 | AT3G06080.1 | 36.214 | 243 | 142 | 3 | 48 | 277 | 98 | 340 | 4.12e-50 | 172 |
| Msa0019900 | AT5G06230.3 | 38.057 | 247 | 134 | 4 | 50 | 277 | 59 | 305 | 1.10e-49 | 169 |
| Msa0019900 | AT3G14850.1 | 36.328 | 256 | 148 | 4 | 122 | 371 | 1 | 247 | 3.92e-49 | 166 |
| Msa0019900 | AT2G31110.1 | 40.553 | 217 | 113 | 4 | 164 | 375 | 9 | 214 | 4.32e-49 | 165 |
| Msa0019900 | AT1G70230.1 | 31.818 | 352 | 192 | 12 | 53 | 375 | 79 | 411 | 1.14e-42 | 154 |
| Msa0019900 | AT1G01430.1 | 28.378 | 370 | 228 | 12 | 37 | 375 | 84 | 447 | 5.29e-41 | 150 |
| Msa0019900 | AT4G25360.1 | 30.053 | 376 | 213 | 14 | 37 | 375 | 162 | 524 | 5.76e-41 | 151 |
| Msa0019900 | AT4G25360.2 | 30.053 | 376 | 213 | 14 | 37 | 375 | 162 | 524 | 5.76e-41 | 151 |
| Msa0019900 | AT4G01080.1 | 28.736 | 348 | 215 | 11 | 49 | 371 | 87 | 426 | 6.89e-39 | 144 |
| Msa0019900 | AT5G51640.1 | 29.491 | 373 | 217 | 12 | 39 | 375 | 126 | 488 | 2.90e-38 | 144 |
| Msa0019900 | AT5G64020.1 | 28.771 | 358 | 214 | 15 | 53 | 375 | 57 | 408 | 3.19e-37 | 139 |
| Msa0019900 | AT4G23790.1 | 27.792 | 385 | 209 | 13 | 34 | 371 | 61 | 423 | 6.27e-37 | 139 |
| Msa0019900 | AT5G64470.3 | 27.624 | 362 | 221 | 11 | 43 | 375 | 45 | 394 | 2.82e-36 | 136 |
| Msa0019900 | AT4G11090.1 | 29.477 | 363 | 204 | 15 | 51 | 375 | 77 | 425 | 8.86e-36 | 135 |
| Msa0019900 | AT5G20680.6 | 26.385 | 379 | 237 | 14 | 26 | 375 | 92 | 457 | 1.34e-35 | 135 |
| Msa0019900 | AT5G64470.2 | 26.923 | 364 | 227 | 12 | 43 | 375 | 45 | 400 | 1.85e-35 | 134 |
| Msa0019900 | AT5G20680.2 | 26.385 | 379 | 237 | 14 | 26 | 375 | 168 | 533 | 3.25e-35 | 135 |
| Msa0019900 | AT5G20680.4 | 26.385 | 379 | 237 | 14 | 26 | 375 | 186 | 551 | 3.65e-35 | 135 |
| Msa0019900 | AT5G20680.1 | 26.385 | 379 | 237 | 14 | 26 | 375 | 186 | 551 | 3.65e-35 | 135 |
| Msa0019900 | AT5G20680.3 | 26.385 | 379 | 237 | 14 | 26 | 375 | 186 | 551 | 3.65e-35 | 135 |
| Msa0019900 | AT5G20680.5 | 26.385 | 379 | 237 | 14 | 26 | 375 | 186 | 551 | 3.65e-35 | 135 |
| Msa0019900 | AT2G37720.1 | 28.814 | 354 | 211 | 14 | 51 | 375 | 141 | 482 | 7.47e-35 | 134 |
| Msa0019900 | AT5G15890.1 | 29.006 | 362 | 204 | 12 | 47 | 375 | 181 | 522 | 1.83e-34 | 133 |
| Msa0019900 | AT5G15900.1 | 28.962 | 366 | 220 | 12 | 40 | 375 | 54 | 409 | 4.66e-34 | 130 |
| Msa0019900 | AT5G15900.2 | 28.962 | 366 | 220 | 12 | 40 | 375 | 73 | 428 | 4.77e-34 | 131 |
| Msa0019900 | AT3G02440.1 | 27.841 | 352 | 215 | 12 | 53 | 375 | 127 | 468 | 3.57e-32 | 126 |
| Msa0019900 | AT3G02440.2 | 27.841 | 352 | 215 | 12 | 53 | 375 | 135 | 476 | 3.86e-32 | 126 |
| Msa0019900 | AT3G28150.1 | 27.882 | 373 | 215 | 17 | 39 | 375 | 56 | 410 | 1.53e-31 | 124 |
| Msa0019900 | AT2G14530.1 | 27.348 | 362 | 213 | 13 | 50 | 375 | 59 | 406 | 2.82e-31 | 123 |
| Msa0019900 | AT5G64470.4 | 26.848 | 257 | 169 | 7 | 43 | 282 | 45 | 299 | 3.19e-24 | 102 |
| Msa0019900 | AT5G64470.1 | 26.953 | 256 | 168 | 7 | 43 | 281 | 45 | 298 | 6.47e-24 | 101 |
Find 131 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCTGGTGTGCCTGATATT+TGG | 0.189016 | 1_1:+34853107 | Msa0019900:CDS |
| TGCTAGATTCTCTATTGTTT+TGG | 0.195292 | 1_1:-34850202 | None:intergenic |
| TAATACCAACTGGTAGAAAA+AGG | 0.249328 | 1_1:+34851798 | Msa0019900:CDS |
| CCACTGTACATTATCTCTTC+TGG | 0.256313 | 1_1:+34850127 | Msa0019900:CDS |
| TGCAACTTGGTTGGCGTTCT+CGG | 0.260822 | 1_1:+34853459 | Msa0019900:three_prime_UTR |
| GCAGTCTGGTTTGTGTATCT+TGG | 0.261971 | 1_1:+34853432 | Msa0019900:three_prime_UTR |
| CTTATGGTTGCTTATCAAAA+AGG | 0.263528 | 1_1:+34852509 | Msa0019900:CDS |
| TTTGATGCACTAAGGTTTCT+TGG | 0.268531 | 1_1:+34851689 | Msa0019900:CDS |
| ACATGTTGACTAACAGTCTA+AGG | 0.290100 | 1_1:-34853261 | None:intergenic |
| AACTAATAGCATTTGTAATT+AGG | 0.297361 | 1_1:+34853190 | Msa0019900:intron |
| GCAGAAAGTTGTGCTAGTTT+TGG | 0.302343 | 1_1:+34853518 | Msa0019900:three_prime_UTR |
| GGTTCAATACCTTCTTTGTT+TGG | 0.309940 | 1_1:+34853539 | Msa0019900:three_prime_UTR |
| GGCCCAAATGGATTTCATTT+AGG | 0.317127 | 1_1:-34853692 | None:intergenic |
| TTCATCAAGGCATGATTTGC+GGG | 0.320342 | 1_1:-34849963 | None:intergenic |
| GCTGAAGAAAATGAGGTTTC+CGG | 0.326494 | 1_1:+34852955 | Msa0019900:CDS |
| AAAATCATACTTATCCTATA+TGG | 0.347597 | 1_1:-34853316 | None:intergenic |
| ATTCCTCTGATTGCAGTCAT+TGG | 0.349039 | 1_1:+34853080 | Msa0019900:CDS |
| GTTCAGGAGCATGTTGTTGC+AGG | 0.359962 | 1_1:-34852910 | None:intergenic |
| AACATCTCATTCCAAATATC+AGG | 0.370214 | 1_1:-34853118 | None:intergenic |
| TAGGGTTATGTAGAGTGAAA+AGG | 0.375327 | 1_1:-34850008 | None:intergenic |
| AAGCCTAAATGAAATCCATT+TGG | 0.378254 | 1_1:+34853689 | Msa0019900:three_prime_UTR |
| TGGACAATGTTAACATCATC+AGG | 0.381677 | 1_1:-34850182 | None:intergenic |
| GCATGTCACCTAGGCATAAC+AGG | 0.386311 | 1_1:+34852600 | Msa0019900:CDS |
| CACTTCTCATAATCAGAATC+TGG | 0.390203 | 1_1:-34850335 | None:intergenic |
| AAACAAGAGAGTCTTACATT+TGG | 0.395362 | 1_1:+34852004 | Msa0019900:CDS |
| CATGCTTCTGAAAATGACTT+TGG | 0.398420 | 1_1:-34852582 | None:intergenic |
| ATTTATATTTCTGGCCCAAA+TGG | 0.401601 | 1_1:-34853704 | None:intergenic |
| AGGATTTGATTGGGAAAAGT+TGG | 0.408189 | 1_1:+34853390 | Msa0019900:three_prime_UTR |
| GTTACAATGCTGCCAACTTA+AGG | 0.408276 | 1_1:-34853294 | None:intergenic |
| ATCGACACGGAGGATTTGAT+TGG | 0.408491 | 1_1:+34853380 | Msa0019900:three_prime_UTR |
| TGAGTGAGTTAAGGAAGAGT+AGG | 0.412926 | 1_1:-34850027 | None:intergenic |
| ATTGAATGGAAGGCCATTGC+AGG | 0.414061 | 1_1:-34851836 | None:intergenic |
| AGGGTTATGTAGAGTGAAAA+GGG | 0.414426 | 1_1:-34850007 | None:intergenic |
| TGCAGTCATTGGTGCCTCCC+TGG | 0.417455 | 1_1:+34853091 | Msa0019900:CDS |
| GGCGTTCTCGGTGGTGATGC+TGG | 0.421423 | 1_1:+34853471 | Msa0019900:three_prime_UTR |
| TCATTGTCGTAATATCTTGC+AGG | 0.431750 | 1_1:-34852982 | None:intergenic |
| ATGTCTTCATTACCATTGAA+TGG | 0.434469 | 1_1:-34851850 | None:intergenic |
| TGGACCCACAAGATGATGTT+GGG | 0.437455 | 1_1:+34850147 | Msa0019900:CDS |
| AGCCTAAATGAAATCCATTT+GGG | 0.441174 | 1_1:+34853690 | Msa0019900:three_prime_UTR |
| AAAGAAAGCAAATGAGTCAT+TGG | 0.443285 | 1_1:-34850083 | None:intergenic |
| GCAGTTACTTGTCAAAAGAA+TGG | 0.450896 | 1_1:+34850308 | Msa0019900:CDS |
| ATGGACATCCTTCAGTGTAT+AGG | 0.463306 | 1_1:+34853020 | Msa0019900:CDS |
| GAGTGAGTTAAGGAAGAGTA+GGG | 0.463745 | 1_1:-34850026 | None:intergenic |
| TGGCAGCATTGTAACCATAT+AGG | 0.463752 | 1_1:+34853302 | Msa0019900:three_prime_UTR |
| GACTGTTAGTCAACATGTAA+TGG | 0.464286 | 1_1:+34853266 | Msa0019900:three_prime_UTR |
| GTAACTGCAGTACTAAGATA+AGG | 0.467342 | 1_1:-34850293 | None:intergenic |
| TGGAGAACAACTAAAGGTTC+AGG | 0.467556 | 1_1:-34852926 | None:intergenic |
| TTCCAAATATCAGGCACACC+AGG | 0.469582 | 1_1:-34853109 | None:intergenic |
| AGTGTGAAGTGAGTGAGTTA+AGG | 0.469980 | 1_1:-34850036 | None:intergenic |
| TCTGTAGGTTTGATGCACTA+AGG | 0.472754 | 1_1:+34851681 | Msa0019900:intron |
| GAAAAGTAGATATACTTGTC+TGG | 0.477462 | 1_1:+34853662 | Msa0019900:three_prime_UTR |
| CTTGGATTCTGCAACTTGGT+TGG | 0.480932 | 1_1:+34853450 | Msa0019900:three_prime_UTR |
| TGCAATGGCCTTCCATTCAA+TGG | 0.483402 | 1_1:+34851838 | Msa0019900:CDS |
| GTACTAAGATAAGGGCAGTT+AGG | 0.483942 | 1_1:-34850284 | None:intergenic |
| TGATTGGGAAAAGTTGGTGG+AGG | 0.487454 | 1_1:+34853396 | Msa0019900:three_prime_UTR |
| TTTCATCAAGGCATGATTTG+CGG | 0.492463 | 1_1:-34849964 | None:intergenic |
| GAACCTTTAGTTGTTCTCCA+TGG | 0.493955 | 1_1:+34852929 | Msa0019900:CDS |
| TCGACACGGAGGATTTGATT+GGG | 0.496128 | 1_1:+34853381 | Msa0019900:three_prime_UTR |
| CAGTTACTTGTCAAAAGAAT+GGG | 0.497842 | 1_1:+34850309 | Msa0019900:CDS |
| CTGGACCCACAAGATGATGT+TGG | 0.501831 | 1_1:+34850146 | Msa0019900:CDS |
| GAGAAGAAAGAGAATAATGT+TGG | 0.502111 | 1_1:+34851718 | Msa0019900:CDS |
| GTACAAGGTGTAATACCAAC+TGG | 0.502784 | 1_1:+34851788 | Msa0019900:CDS |
| ATTTGATTGGGAAAAGTTGG+TGG | 0.503814 | 1_1:+34853393 | Msa0019900:three_prime_UTR |
| GTATCAAAGCTGCTGCAGTC+TGG | 0.509135 | 1_1:+34853418 | Msa0019900:three_prime_UTR |
| TAACTGCAGTACTAAGATAA+GGG | 0.511515 | 1_1:-34850292 | None:intergenic |
| TCGAGGAGAATGCAAAGTAT+TGG | 0.512927 | 1_1:+34852033 | Msa0019900:CDS |
| CTGATTATGAGAAGTGGAAG+TGG | 0.515175 | 1_1:+34850342 | Msa0019900:CDS |
| GTAATATCTTGCAGGTATAC+CGG | 0.515454 | 1_1:-34852974 | None:intergenic |
| CTTCATTACCATTGAATGGA+AGG | 0.525435 | 1_1:-34851846 | None:intergenic |
| TATTTGATTCAGCTCAGTGG+TGG | 0.527529 | 1_1:+34852075 | Msa0019900:CDS |
| GTATCTTGGATTCTGCAACT+TGG | 0.528317 | 1_1:+34853446 | Msa0019900:three_prime_UTR |
| CACTCCCTTAGCTTCTTCCA+TGG | 0.528413 | 1_1:+34850055 | Msa0019900:exon |
| TTCAATAATGAGAAATCAGT+GGG | 0.529697 | 1_1:+34851748 | Msa0019900:CDS |
| GGAAGTAAAGTGTTTCATCA+AGG | 0.530205 | 1_1:-34849976 | None:intergenic |
| GAAACCCAACATCATCTTGT+GGG | 0.534722 | 1_1:-34850151 | None:intergenic |
| TGTTGCCATGGAAGAAGCTA+AGG | 0.535620 | 1_1:-34850060 | None:intergenic |
| TTCTTCAGTTCAACTAACAA+TGG | 0.540448 | 1_1:-34851972 | None:intergenic |
| CAAGTGGTTGTTCTATTCCA+AGG | 0.549525 | 1_1:+34850369 | Msa0019900:CDS |
| ACTGAGTACATGGGCAAGGT+GGG | 0.549939 | 1_1:+34852532 | Msa0019900:CDS |
| GGGCAGTTAGGATCATAAAG+AGG | 0.560599 | 1_1:-34850272 | None:intergenic |
| AAAACTTCACCAAACAAAGA+AGG | 0.564383 | 1_1:-34853548 | None:intergenic |
| GGAAGGCCATTGCAGGTCCA+TGG | 0.570480 | 1_1:-34851829 | None:intergenic |
| GGCAGTTAGGATCATAAAGA+GGG | 0.572794 | 1_1:-34850271 | None:intergenic |
| GACCTACCATGGACCTGCAA+TGG | 0.573638 | 1_1:+34851823 | Msa0019900:CDS |
| ATATAGTACCTGTTATGCCT+AGG | 0.573860 | 1_1:-34852608 | None:intergenic |
| CTTACATTTGGATTTGATCG+AGG | 0.576704 | 1_1:+34852016 | Msa0019900:CDS |
| GTAATGGAAGGACCTTAAGT+TGG | 0.581194 | 1_1:+34853282 | Msa0019900:three_prime_UTR |
| GAGTACATGGGCAAGGTGGG+TGG | 0.582998 | 1_1:+34852535 | Msa0019900:CDS |
| TCTTTAGTATGCTTAGTACA+AGG | 0.583313 | 1_1:+34851773 | Msa0019900:CDS |
| ACTCCATGGAGAACAACTAA+AGG | 0.583595 | 1_1:-34852932 | None:intergenic |
| ATGGAGTGCTGAAGAAAATG+AGG | 0.587397 | 1_1:+34852948 | Msa0019900:CDS |
| GACTGAGTACATGGGCAAGG+TGG | 0.591699 | 1_1:+34852531 | Msa0019900:CDS |
| ATGAGTCATTGGTGTTGCCA+TGG | 0.591707 | 1_1:-34850072 | None:intergenic |
| TTGTATTTGATTCAGCTCAG+TGG | 0.592724 | 1_1:+34852072 | Msa0019900:CDS |
| AGAGTGAAAAGGGTTGGTGT+TGG | 0.593466 | 1_1:-34849997 | None:intergenic |
| TCTCGGTGGTGATGCTGGTG+TGG | 0.594671 | 1_1:+34853476 | Msa0019900:three_prime_UTR |
| TTATGTAGAGTGAAAAGGGT+TGG | 0.595226 | 1_1:-34850003 | None:intergenic |
| CAGATTCTGATTATGAGAAG+TGG | 0.598360 | 1_1:+34850336 | Msa0019900:CDS |
| CTTGGAATAGAACAACCACT+TGG | 0.601949 | 1_1:-34850368 | None:intergenic |
| AGAAAGAGAATAATGTTGGT+GGG | 0.602888 | 1_1:+34851722 | Msa0019900:CDS |
| AATGACTGCAATCAGAGGAA+TGG | 0.604666 | 1_1:-34853078 | None:intergenic |
| AGGATGTCCATCTCTGCGTA+AGG | 0.608878 | 1_1:-34853008 | None:intergenic |
| AGAAACCCAACATCATCTTG+TGG | 0.610318 | 1_1:-34850152 | None:intergenic |
| GGCCATTGCAGGTCCATGGT+AGG | 0.611844 | 1_1:-34851825 | None:intergenic |
| GTTGCCTTCCTATACACTGA+AGG | 0.612680 | 1_1:-34853028 | None:intergenic |
| CATGTTGACTAACAGTCTAA+GGG | 0.613736 | 1_1:-34853260 | None:intergenic |
| ATGACCGCCTTACGCAGAGA+TGG | 0.614118 | 1_1:+34853001 | Msa0019900:CDS |
| ATTCAATAATGAGAAATCAG+TGG | 0.617219 | 1_1:+34851747 | Msa0019900:CDS |
| GTTAGTCAACATGTAATGGA+AGG | 0.621604 | 1_1:+34853270 | Msa0019900:three_prime_UTR |
| TCCAAATATCAGGCACACCA+GGG | 0.626960 | 1_1:-34853108 | None:intergenic |
| GCACCAATGACTGCAATCAG+AGG | 0.627161 | 1_1:-34853083 | None:intergenic |
| AAGAAAGAGAATAATGTTGG+TGG | 0.628229 | 1_1:+34851721 | Msa0019900:CDS |
| GAGAATGCAAAGTATTGGAG+AGG | 0.631125 | 1_1:+34852038 | Msa0019900:CDS |
| ACTGAGCTGAATCAAATACA+AGG | 0.634640 | 1_1:-34852070 | None:intergenic |
| ATACAGGTGGGATTACTACA+AGG | 0.638309 | 1_1:+34852457 | Msa0019900:intron |
| TCATCAAGGCATGATTTGCG+GGG | 0.644214 | 1_1:-34849962 | None:intergenic |
| AACTTGGTTGGCGTTCTCGG+TGG | 0.646779 | 1_1:+34853462 | Msa0019900:three_prime_UTR |
| AGGTGGGATTACTACAAGGA+GGG | 0.648410 | 1_1:+34852461 | Msa0019900:intron |
| AAGGACTGAGTACATGGGCA+AGG | 0.650632 | 1_1:+34852528 | Msa0019900:CDS |
| ATGTCCATCTCTGCGTAAGG+CGG | 0.652540 | 1_1:-34853005 | None:intergenic |
| TTACTTGTCAAAAGAATGGG+AGG | 0.658568 | 1_1:+34850312 | Msa0019900:CDS |
| ACATCCTTCAGTGTATAGGA+AGG | 0.659861 | 1_1:+34853024 | Msa0019900:CDS |
| GTTGCCATGGAAGAAGCTAA+GGG | 0.675280 | 1_1:-34850059 | None:intergenic |
| TCTAAGGGAAGTGTAACAGA+AGG | 0.680249 | 1_1:-34853245 | None:intergenic |
| CCAGAAGAGATAATGTACAG+TGG | 0.696356 | 1_1:-34850127 | None:intergenic |
| CAGGTGGGATTACTACAAGG+AGG | 0.703135 | 1_1:+34852460 | Msa0019900:intron |
| AGATGAACGTGAAATCGACA+CGG | 0.733018 | 1_1:+34853367 | Msa0019900:three_prime_UTR |
| AAATTGATAATAGACTCACA+TGG | 0.740776 | 1_1:-34853614 | None:intergenic |
| AAATATCAGGCACACCAGGG+AGG | 0.749580 | 1_1:-34853105 | None:intergenic |
| AAGTGGAAGTGGAAGCCAAG+TGG | 0.762111 | 1_1:+34850353 | Msa0019900:CDS |
| TGAACGTGAAATCGACACGG+AGG | 0.770904 | 1_1:+34853370 | Msa0019900:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTAGATAAAATTTATATTT+TGG | - | chr1_1:34850561-34850580 | None:intergenic | 10.0% |
| !!! | CAAAATATAAATTTTATCTA+AGG | + | chr1_1:34850559-34850578 | Msa0019900:intron | 10.0% |
| !!! | TTTTTTTTTTAATCTTTAAC+AGG | + | chr1_1:34850640-34850659 | Msa0019900:intron | 10.0% |
| !!! | TAATATACTTTTTTGTAATT+AGG | + | chr1_1:34853221-34853240 | Msa0019900:three_prime_UTR | 10.0% |
| !!! | CTCAAATTTTAATTTAATGA+TGG | - | chr1_1:34850499-34850518 | None:intergenic | 15.0% |
| !!! | AACTTTGTTTATCAATTAAA+TGG | - | chr1_1:34850710-34850729 | None:intergenic | 15.0% |
| !!! | TAGTATTTTCTAGATTTTTT+AGG | + | chr1_1:34850997-34851016 | Msa0019900:intron | 15.0% |
| !!! | AGTATTTTCTAGATTTTTTA+GGG | + | chr1_1:34850998-34851017 | Msa0019900:intron | 15.0% |
| !! | AGATTTATTATTCAAATTTG+TGG | + | chr1_1:34851032-34851051 | Msa0019900:intron | 15.0% |
| !! | CATTTACTTAAATACAAATT+TGG | - | chr1_1:34851603-34851622 | None:intergenic | 15.0% |
| !!! | ACAAAAAAGTATATTAGTTT+AGG | - | chr1_1:34853217-34853236 | None:intergenic | 15.0% |
| !!! | TACTTTTTCATTTATATTTC+TGG | - | chr1_1:34853716-34853735 | None:intergenic | 15.0% |
| !!! | TTTTTTTAGAACTCAATATC+CGG | - | chr1_1:34850920-34850939 | None:intergenic | 20.0% |
| !!! | ATTGAGTTCTAAAAAAAACA+TGG | + | chr1_1:34850923-34850942 | Msa0019900:intron | 20.0% |
| !!! | GTATTTTCTAGATTTTTTAG+GGG | + | chr1_1:34850999-34851018 | Msa0019900:intron | 20.0% |
| !!! | TTGTGTTATTGTAATTTGTA+CGG | + | chr1_1:34851212-34851231 | Msa0019900:intron | 20.0% |
| !! | ACTAAAATGACTAACATTTA+GGG | - | chr1_1:34851293-34851312 | None:intergenic | 20.0% |
| !! | CTTAAAATAAGTAAAATGGA+AGG | - | chr1_1:34851516-34851535 | None:intergenic | 20.0% |
| !!! | CTTCCATTTTACTTATTTTA+AGG | + | chr1_1:34851514-34851533 | Msa0019900:intron | 20.0% |
| !! | AGTCCTTAAAATAAGTAAAA+TGG | - | chr1_1:34851520-34851539 | None:intergenic | 20.0% |
| !! | GTAAATGAATTTCAAAACTT+TGG | + | chr1_1:34851616-34851635 | Msa0019900:intron | 20.0% |
| !!! | AAATGACTTTGGTTTTTTTA+GGG | - | chr1_1:34852574-34852593 | None:intergenic | 20.0% |
| !!! | AAAATGACTTTGGTTTTTTT+AGG | - | chr1_1:34852575-34852594 | None:intergenic | 20.0% |
| !! | TGATTTCCGATAAAATATTA+TGG | - | chr1_1:34852733-34852752 | None:intergenic | 20.0% |
| !!! | TTACAAATGCTATTAGTTTA+GGG | - | chr1_1:34853188-34853207 | None:intergenic | 20.0% |
| !!! | ATTACAAATGCTATTAGTTT+AGG | - | chr1_1:34853189-34853208 | None:intergenic | 20.0% |
| !! | AACTAATAGCATTTGTAATT+AGG | + | chr1_1:34853190-34853209 | Msa0019900:intron | 20.0% |
| !! | AAAATCATACTTATCCTATA+TGG | - | chr1_1:34853319-34853338 | None:intergenic | 20.0% |
| ! | TATAGAAGAAAACAAAAAGG+TGG | - | chr1_1:34850408-34850427 | None:intergenic | 25.0% |
| ! | GTGTATAGAAGAAAACAAAA+AGG | - | chr1_1:34850411-34850430 | None:intergenic | 25.0% |
| ! | TTATCAATTAAATGGATGCA+GGG | - | chr1_1:34850702-34850721 | None:intergenic | 25.0% |
| ! | TTTATCAATTAAATGGATGC+AGG | - | chr1_1:34850703-34850722 | None:intergenic | 25.0% |
| ! | CAAAGTTTACTAATCAAACA+TGG | + | chr1_1:34850723-34850742 | Msa0019900:intron | 25.0% |
| !!! | AGTTCTAAAAAAAACATGGT+TGG | + | chr1_1:34850927-34850946 | Msa0019900:intron | 25.0% |
| !!! | TTTTTTTATCAACTCTGAGT+AGG | + | chr1_1:34851091-34851110 | Msa0019900:intron | 25.0% |
| !!! | TTTTTTATCAACTCTGAGTA+GGG | + | chr1_1:34851092-34851111 | Msa0019900:intron | 25.0% |
| !! | TATTGTAATTTGTACGGATA+TGG | + | chr1_1:34851218-34851237 | Msa0019900:intron | 25.0% |
| ! | GACTAAAATGACTAACATTT+AGG | - | chr1_1:34851294-34851313 | None:intergenic | 25.0% |
| ! | CTTCTAACAGAAAAACTTTA+GGG | - | chr1_1:34851377-34851396 | None:intergenic | 25.0% |
| !!! | ACAAATATTTTCAGGCAAAA+TGG | - | chr1_1:34851436-34851455 | None:intergenic | 25.0% |
| !! | ATTTTGCCTGAAAATATTTG+TGG | + | chr1_1:34851435-34851454 | Msa0019900:intron | 25.0% |
| !! | AAGAATCCACAAATATTTTC+AGG | - | chr1_1:34851444-34851463 | None:intergenic | 25.0% |
| !! | TTTGTGGATTCTTTTTAATG+TGG | + | chr1_1:34851451-34851470 | Msa0019900:intron | 25.0% |
| ! | AAAATAAGTAAAATGGAAGG+TGG | - | chr1_1:34851513-34851532 | None:intergenic | 25.0% |
| ! | GTTCTTGAAATTGTAAATGT+TGG | - | chr1_1:34851581-34851600 | None:intergenic | 25.0% |
| ! | ATTCAATAATGAGAAATCAG+TGG | + | chr1_1:34851747-34851766 | Msa0019900:CDS | 25.0% |
| ! | TTCAATAATGAGAAATCAGT+GGG | + | chr1_1:34851748-34851767 | Msa0019900:CDS | 25.0% |
| ! | TGTCAATAATTTACAAAGGA+AGG | - | chr1_1:34851900-34851919 | None:intergenic | 25.0% |
| ! | GTGATGTCAATAATTTACAA+AGG | - | chr1_1:34851904-34851923 | None:intergenic | 25.0% |
| !! | AGACATCAATTGAGTTTTTA+TGG | + | chr1_1:34851946-34851965 | Msa0019900:CDS | 25.0% |
| !! | GACATCAATTGAGTTTTTAT+GGG | + | chr1_1:34851947-34851966 | Msa0019900:CDS | 25.0% |
| ! | AAACTATCTTAGAAAGCTTA+TGG | + | chr1_1:34852317-34852336 | Msa0019900:intron | 25.0% |
| ! | AACTATCTTAGAAAGCTTAT+GGG | + | chr1_1:34852318-34852337 | Msa0019900:intron | 25.0% |
| !! | TTCGTTAAACTTTCTAAAAG+AGG | + | chr1_1:34852380-34852399 | Msa0019900:intron | 25.0% |
| !! | GACAAAGATAAACAAGTTTT+AGG | - | chr1_1:34852647-34852666 | None:intergenic | 25.0% |
| !! | ACGACACCATAATATTTTAT+CGG | + | chr1_1:34852724-34852743 | Msa0019900:intron | 25.0% |
| ! | AATGCCAAAAACAAAACTAT+AGG | - | chr1_1:34852806-34852825 | None:intergenic | 25.0% |
| !!! | GATTTTTTATGTAGGGAAAA+TGG | + | chr1_1:34852845-34852864 | Msa0019900:intron | 25.0% |
| !!! | CTATTTTTTGTTTCTCATCT+TGG | - | chr1_1:34853057-34853076 | None:intergenic | 25.0% |
| ! | CAAGATGAGAAACAAAAAAT+AGG | + | chr1_1:34853055-34853074 | Msa0019900:CDS | 25.0% |
| !! | AAATTGATAATAGACTCACA+TGG | - | chr1_1:34853617-34853636 | None:intergenic | 25.0% |
| AAAGAAAGCAAATGAGTCAT+TGG | - | chr1_1:34850086-34850105 | None:intergenic | 30.0% | |
| ! | TGCTAGATTCTCTATTGTTT+TGG | - | chr1_1:34850205-34850224 | None:intergenic | 30.0% |
| ! | TGACTTTTCTGTTGGAAAAT+GGG | + | chr1_1:34850232-34850251 | Msa0019900:CDS | 30.0% |
| TAACTGCAGTACTAAGATAA+GGG | - | chr1_1:34850295-34850314 | None:intergenic | 30.0% | |
| CAGTTACTTGTCAAAAGAAT+GGG | + | chr1_1:34850309-34850328 | Msa0019900:CDS | 30.0% | |
| ATGTTAACATGTACTCTTAG+TGG | + | chr1_1:34850521-34850540 | Msa0019900:intron | 30.0% | |
| !! | TTGAAATTTTAAGTGCTCTG+AGG | - | chr1_1:34850672-34850691 | None:intergenic | 30.0% |
| GATCTCAAATCAACATCATT+AGG | - | chr1_1:34850749-34850768 | None:intergenic | 30.0% | |
| !!! | CTTAGAGTGTGCTTTTTTTA+AGG | + | chr1_1:34850768-34850787 | Msa0019900:intron | 30.0% |
| GATTCCTTATGTATCAATTC+CGG | + | chr1_1:34850801-34850820 | Msa0019900:intron | 30.0% | |
| ATTAGATCTCTCGAATTAGT+CGG | + | chr1_1:34850886-34850905 | Msa0019900:intron | 30.0% | |
| ! | TTTTTATCAACTCTGAGTAG+GGG | + | chr1_1:34851093-34851112 | Msa0019900:intron | 30.0% |
| ! | TAAAATCTGAGATCAATGGA+GGG | - | chr1_1:34851152-34851171 | None:intergenic | 30.0% |
| ! | TTAAAATCTGAGATCAATGG+AGG | - | chr1_1:34851153-34851172 | None:intergenic | 30.0% |
| ! | GGATTAAAATCTGAGATCAA+TGG | - | chr1_1:34851156-34851175 | None:intergenic | 30.0% |
| AAGTTATGCATATAGGAGAT+GGG | - | chr1_1:34851177-34851196 | None:intergenic | 30.0% | |
| ACTATGGAAGTTATGCATAT+AGG | - | chr1_1:34851184-34851203 | None:intergenic | 30.0% | |
| TAACACAAAAACCATGACTA+TGG | - | chr1_1:34851200-34851219 | None:intergenic | 30.0% | |
| AGTCTCCAAATTTCATGAAT+AGG | + | chr1_1:34851310-34851329 | Msa0019900:intron | 30.0% | |
| AGTTGCCTATTCATGAAATT+TGG | - | chr1_1:34851318-34851337 | None:intergenic | 30.0% | |
| CCTTCTAACAGAAAAACTTT+AGG | - | chr1_1:34851378-34851397 | None:intergenic | 30.0% | |
| ! | CCTAAAGTTTTTCTGTTAGA+AGG | + | chr1_1:34851375-34851394 | Msa0019900:intron | 30.0% |
| GAGAAGAAAGAGAATAATGT+TGG | + | chr1_1:34851718-34851737 | Msa0019900:CDS | 30.0% | |
| AAGAAAGAGAATAATGTTGG+TGG | + | chr1_1:34851721-34851740 | Msa0019900:CDS | 30.0% | |
| AGAAAGAGAATAATGTTGGT+GGG | + | chr1_1:34851722-34851741 | Msa0019900:CDS | 30.0% | |
| TCTTTAGTATGCTTAGTACA+AGG | + | chr1_1:34851773-34851792 | Msa0019900:CDS | 30.0% | |
| TAATACCAACTGGTAGAAAA+AGG | + | chr1_1:34851798-34851817 | Msa0019900:CDS | 30.0% | |
| AATACCAACTGGTAGAAAAA+GGG | + | chr1_1:34851799-34851818 | Msa0019900:CDS | 30.0% | |
| ATGTCTTCATTACCATTGAA+TGG | - | chr1_1:34851853-34851872 | None:intergenic | 30.0% | |
| TTCTTCAGTTCAACTAACAA+TGG | - | chr1_1:34851975-34851994 | None:intergenic | 30.0% | |
| AAACAAGAGAGTCTTACATT+TGG | + | chr1_1:34852004-34852023 | Msa0019900:CDS | 30.0% | |
| ACGAGGGAAATTAAGAAAAT+GGG | - | chr1_1:34852173-34852192 | None:intergenic | 30.0% | |
| TACGAGGGAAATTAAGAAAA+TGG | - | chr1_1:34852174-34852193 | None:intergenic | 30.0% | |
| ! | ATTTTCTTAATTTCCCTCGT+AGG | + | chr1_1:34852173-34852192 | Msa0019900:intron | 30.0% |
| AATAAGCCAAAATCAGCTTA+CGG | + | chr1_1:34852341-34852360 | Msa0019900:intron | 30.0% | |
| TGCTTCTTTCTTGAAAATAC+AGG | + | chr1_1:34852441-34852460 | Msa0019900:intron | 30.0% | |
| TTCTTTCTTGAAAATACAGG+TGG | + | chr1_1:34852444-34852463 | Msa0019900:intron | 30.0% | |
| TCTTTCTTGAAAATACAGGT+GGG | + | chr1_1:34852445-34852464 | Msa0019900:intron | 30.0% | |
| GATCAAAAAGATGACTCTTA+TGG | + | chr1_1:34852493-34852512 | Msa0019900:CDS | 30.0% | |
| CTTATGGTTGCTTATCAAAA+AGG | + | chr1_1:34852509-34852528 | Msa0019900:CDS | 30.0% | |
| ACTTAGTGAGATATAAGACT+TGG | - | chr1_1:34852683-34852702 | None:intergenic | 30.0% | |
| ! | ACTAAGTGAAGTTGATTACA+TGG | + | chr1_1:34852696-34852715 | Msa0019900:intron | 30.0% |
| GTTAAGATTTAGAAGCTCAA+TGG | - | chr1_1:34852774-34852793 | None:intergenic | 30.0% | |
| !!! | TTCGCCTATAGTTTTGTTTT+TGG | + | chr1_1:34852799-34852818 | Msa0019900:intron | 30.0% |
| !!! | AGCGATTGGATTTTTTATGT+AGG | + | chr1_1:34852837-34852856 | Msa0019900:intron | 30.0% |
| !!! | GCGATTGGATTTTTTATGTA+GGG | + | chr1_1:34852838-34852857 | Msa0019900:intron | 30.0% |
| ! | TTTTATGTAGGGAAAATGGT+TGG | + | chr1_1:34852849-34852868 | Msa0019900:intron | 30.0% |
| AACATCTCATTCCAAATATC+AGG | - | chr1_1:34853121-34853140 | None:intergenic | 30.0% | |
| AAAACTTCACCAAACAAAGA+AGG | - | chr1_1:34853551-34853570 | None:intergenic | 30.0% | |
| GAAAAGTAGATATACTTGTC+TGG | + | chr1_1:34853662-34853681 | Msa0019900:three_prime_UTR | 30.0% | |
| AAGCCTAAATGAAATCCATT+TGG | + | chr1_1:34853689-34853708 | Msa0019900:three_prime_UTR | 30.0% | |
| AGCCTAAATGAAATCCATTT+GGG | + | chr1_1:34853690-34853709 | Msa0019900:three_prime_UTR | 30.0% | |
| !! | ATTTATATTTCTGGCCCAAA+TGG | - | chr1_1:34853707-34853726 | None:intergenic | 30.0% |
| TTTCATCAAGGCATGATTTG+CGG | - | chr1_1:34849967-34849986 | None:intergenic | 35.0% | |
| ! | GGAAGTAAAGTGTTTCATCA+AGG | - | chr1_1:34849979-34849998 | None:intergenic | 35.0% |
| TTATGTAGAGTGAAAAGGGT+TGG | - | chr1_1:34850006-34850025 | None:intergenic | 35.0% | |
| AGGGTTATGTAGAGTGAAAA+GGG | - | chr1_1:34850010-34850029 | None:intergenic | 35.0% | |
| TAGGGTTATGTAGAGTGAAA+AGG | - | chr1_1:34850011-34850030 | None:intergenic | 35.0% | |
| TGGACAATGTTAACATCATC+AGG | - | chr1_1:34850185-34850204 | None:intergenic | 35.0% | |
| ! | AAGAGATGTGACTTTTCTGT+TGG | + | chr1_1:34850224-34850243 | Msa0019900:CDS | 35.0% |
| ! | GTGACTTTTCTGTTGGAAAA+TGG | + | chr1_1:34850231-34850250 | Msa0019900:CDS | 35.0% |
| GTAACTGCAGTACTAAGATA+AGG | - | chr1_1:34850296-34850315 | None:intergenic | 35.0% | |
| GCAGTTACTTGTCAAAAGAA+TGG | + | chr1_1:34850308-34850327 | Msa0019900:CDS | 35.0% | |
| TTACTTGTCAAAAGAATGGG+AGG | + | chr1_1:34850312-34850331 | Msa0019900:CDS | 35.0% | |
| CACTTCTCATAATCAGAATC+TGG | - | chr1_1:34850338-34850357 | None:intergenic | 35.0% | |
| CAGATTCTGATTATGAGAAG+TGG | + | chr1_1:34850336-34850355 | Msa0019900:CDS | 35.0% | |
| !!! | AAATTTTAAGTGCTCTGAGG+AGG | - | chr1_1:34850669-34850688 | None:intergenic | 35.0% |
| TCTCTATATAACTAGTCCAC+CGG | - | chr1_1:34850823-34850842 | None:intergenic | 35.0% | |
| TAATCTCACTGTTCAATTGC+GGG | - | chr1_1:34850870-34850889 | None:intergenic | 35.0% | |
| CTAATCTCACTGTTCAATTG+CGG | - | chr1_1:34850871-34850890 | None:intergenic | 35.0% | |
| TACTATGACTACTTGTGTCA+AGG | - | chr1_1:34850982-34851001 | None:intergenic | 35.0% | |
| GAAGTTATGCATATAGGAGA+TGG | - | chr1_1:34851178-34851197 | None:intergenic | 35.0% | |
| ATGCATAACTTCCATAGTCA+TGG | + | chr1_1:34851186-34851205 | Msa0019900:intron | 35.0% | |
| ! | TCACCTAGTTTGTAACATGT+CGG | + | chr1_1:34851341-34851360 | Msa0019900:intron | 35.0% |
| TAAAATGGAAGGTGGTTCAA+TGG | - | chr1_1:34851505-34851524 | None:intergenic | 35.0% | |
| TTTGATGCACTAAGGTTTCT+TGG | + | chr1_1:34851689-34851708 | Msa0019900:CDS | 35.0% | |
| CTTCATTACCATTGAATGGA+AGG | - | chr1_1:34851849-34851868 | None:intergenic | 35.0% | |
| ! | ATTGACATCACAGTTTTCTC+TGG | + | chr1_1:34851913-34851932 | Msa0019900:intron | 35.0% |
| !!! | TGTAAGACTCTCTTGTTTTC+TGG | - | chr1_1:34852002-34852021 | None:intergenic | 35.0% |
| CTTACATTTGGATTTGATCG+AGG | + | chr1_1:34852016-34852035 | Msa0019900:CDS | 35.0% | |
| ACTGAGCTGAATCAAATACA+AGG | - | chr1_1:34852073-34852092 | None:intergenic | 35.0% | |
| TTGTATTTGATTCAGCTCAG+TGG | + | chr1_1:34852072-34852091 | Msa0019900:CDS | 35.0% | |
| !!! | TCCTTACGAGCTTGTTTTAT+CGG | - | chr1_1:34852108-34852127 | None:intergenic | 35.0% |
| AATGGGATGATATGAAGAGA+AGG | - | chr1_1:34852156-34852175 | None:intergenic | 35.0% | |
| ! | TTAAGTAGTTTGTCCTACGA+GGG | - | chr1_1:34852189-34852208 | None:intergenic | 35.0% |
| ! | ATTAAGTAGTTTGTCCTACG+AGG | - | chr1_1:34852190-34852209 | None:intergenic | 35.0% |
| ATCAAAAAGGACTGAGTACA+TGG | + | chr1_1:34852522-34852541 | Msa0019900:CDS | 35.0% | |
| TCAAAAAGGACTGAGTACAT+GGG | + | chr1_1:34852523-34852542 | Msa0019900:CDS | 35.0% | |
| ! | CATGCTTCTGAAAATGACTT+TGG | - | chr1_1:34852585-34852604 | None:intergenic | 35.0% |
| ATATAGTACCTGTTATGCCT+AGG | - | chr1_1:34852611-34852630 | None:intergenic | 35.0% | |
| ATTTCATTGTCTCTAGCGAT+TGG | + | chr1_1:34852823-34852842 | Msa0019900:intron | 35.0% | |
| GTAATATCTTGCAGGTATAC+CGG | - | chr1_1:34852977-34852996 | None:intergenic | 35.0% | |
| TCATTGTCGTAATATCTTGC+AGG | - | chr1_1:34852985-34853004 | None:intergenic | 35.0% | |
| !! | TTTTTGTTTCTCATCTTGGC+TGG | - | chr1_1:34853053-34853072 | None:intergenic | 35.0% |
| ! | CATGTTGACTAACAGTCTAA+GGG | - | chr1_1:34853263-34853282 | None:intergenic | 35.0% |
| ! | ACATGTTGACTAACAGTCTA+AGG | - | chr1_1:34853264-34853283 | None:intergenic | 35.0% |
| GACTGTTAGTCAACATGTAA+TGG | + | chr1_1:34853266-34853285 | Msa0019900:three_prime_UTR | 35.0% | |
| ! | GTTAGTCAACATGTAATGGA+AGG | + | chr1_1:34853270-34853289 | Msa0019900:three_prime_UTR | 35.0% |
| AGGATTTGATTGGGAAAAGT+TGG | + | chr1_1:34853390-34853409 | Msa0019900:three_prime_UTR | 35.0% | |
| ATTTGATTGGGAAAAGTTGG+TGG | + | chr1_1:34853393-34853412 | Msa0019900:three_prime_UTR | 35.0% | |
| GGTTCAATACCTTCTTTGTT+TGG | + | chr1_1:34853539-34853558 | Msa0019900:three_prime_UTR | 35.0% | |
| ! | TTGGTGAAGTTTTTCTGTGT+AGG | + | chr1_1:34853558-34853577 | Msa0019900:three_prime_UTR | 35.0% |
| ! | AAGTTTTTCTGTGTAGGTTG+AGG | + | chr1_1:34853564-34853583 | Msa0019900:three_prime_UTR | 35.0% |
| !! | AGTTTTTCTGTGTAGGTTGA+GGG | + | chr1_1:34853565-34853584 | Msa0019900:three_prime_UTR | 35.0% |
| GAGTGAGTTAAGGAAGAGTA+GGG | - | chr1_1:34850029-34850048 | None:intergenic | 40.0% | |
| TGAGTGAGTTAAGGAAGAGT+AGG | - | chr1_1:34850030-34850049 | None:intergenic | 40.0% | |
| AGTGTGAAGTGAGTGAGTTA+AGG | - | chr1_1:34850039-34850058 | None:intergenic | 40.0% | |
| CCAGAAGAGATAATGTACAG+TGG | - | chr1_1:34850130-34850149 | None:intergenic | 40.0% | |
| CCACTGTACATTATCTCTTC+TGG | + | chr1_1:34850127-34850146 | Msa0019900:CDS | 40.0% | |
| GAAACCCAACATCATCTTGT+GGG | - | chr1_1:34850154-34850173 | None:intergenic | 40.0% | |
| AGAAACCCAACATCATCTTG+TGG | - | chr1_1:34850155-34850174 | None:intergenic | 40.0% | |
| GGCAGTTAGGATCATAAAGA+GGG | - | chr1_1:34850274-34850293 | None:intergenic | 40.0% | |
| GTACTAAGATAAGGGCAGTT+AGG | - | chr1_1:34850287-34850306 | None:intergenic | 40.0% | |
| CTGATTATGAGAAGTGGAAG+TGG | + | chr1_1:34850342-34850361 | Msa0019900:CDS | 40.0% | |
| CTTGGAATAGAACAACCACT+TGG | - | chr1_1:34850371-34850390 | None:intergenic | 40.0% | |
| CAAGTGGTTGTTCTATTCCA+AGG | + | chr1_1:34850369-34850388 | Msa0019900:CDS | 40.0% | |
| TCCTTATGTATCAATTCCGG+TGG | + | chr1_1:34850804-34850823 | Msa0019900:intron | 40.0% | |
| TCCACCGGAATTGATACATA+AGG | - | chr1_1:34850808-34850827 | None:intergenic | 40.0% | |
| AATCTCACTGTTCAATTGCG+GGG | - | chr1_1:34850869-34850888 | None:intergenic | 40.0% | |
| TCTCGAATTAGTCGGTCTTT+AGG | + | chr1_1:34850894-34850913 | Msa0019900:intron | 40.0% | |
| GTGGATGATGAGTTTGTGAA+TGG | + | chr1_1:34851248-34851267 | Msa0019900:intron | 40.0% | |
| TCACCGACATGTTACAAACT+AGG | - | chr1_1:34851347-34851366 | None:intergenic | 40.0% | |
| AGCTGGTTAAGTTTACAAGC+AGG | - | chr1_1:34851654-34851673 | None:intergenic | 40.0% | |
| AACCAGCTTATTACCTCTGT+AGG | + | chr1_1:34851666-34851685 | Msa0019900:intron | 40.0% | |
| AACCTACAGAGGTAATAAGC+TGG | - | chr1_1:34851671-34851690 | None:intergenic | 40.0% | |
| TTAGTGCATCAAACCTACAG+AGG | - | chr1_1:34851682-34851701 | None:intergenic | 40.0% | |
| TCTGTAGGTTTGATGCACTA+AGG | + | chr1_1:34851681-34851700 | Msa0019900:intron | 40.0% | |
| GTACAAGGTGTAATACCAAC+TGG | + | chr1_1:34851788-34851807 | Msa0019900:CDS | 40.0% | |
| ! | ACATCACAGTTTTCTCTGGT+AGG | + | chr1_1:34851917-34851936 | Msa0019900:intron | 40.0% |
| TCGAGGAGAATGCAAAGTAT+TGG | + | chr1_1:34852033-34852052 | Msa0019900:CDS | 40.0% | |
| !! | GAGAATGCAAAGTATTGGAG+AGG | + | chr1_1:34852038-34852057 | Msa0019900:CDS | 40.0% |
| TATTTGATTCAGCTCAGTGG+TGG | + | chr1_1:34852075-34852094 | Msa0019900:CDS | 40.0% | |
| TCCGATAAAACAAGCTCGTA+AGG | + | chr1_1:34852104-34852123 | Msa0019900:intron | 40.0% | |
| CAAAATCAGCTTACGGACAT+GGG | + | chr1_1:34852348-34852367 | Msa0019900:intron | 40.0% | |
| ATACAGGTGGGATTACTACA+AGG | + | chr1_1:34852457-34852476 | Msa0019900:intron | 40.0% | |
| !! | TTTTCAGAAGCATGTCACCT+AGG | + | chr1_1:34852591-34852610 | Msa0019900:CDS | 40.0% |
| AGATTTAGAAGCTCAATGGC+TGG | - | chr1_1:34852770-34852789 | None:intergenic | 40.0% | |
| TGTTGTTGCAGGCTGAAAAA+TGG | - | chr1_1:34852902-34852921 | None:intergenic | 40.0% | |
| TGGAGAACAACTAAAGGTTC+AGG | - | chr1_1:34852929-34852948 | None:intergenic | 40.0% | |
| GAACCTTTAGTTGTTCTCCA+TGG | + | chr1_1:34852929-34852948 | Msa0019900:CDS | 40.0% | |
| ACTCCATGGAGAACAACTAA+AGG | - | chr1_1:34852935-34852954 | None:intergenic | 40.0% | |
| ! | TCATTTTCTTCAGCACTCCA+TGG | - | chr1_1:34852949-34852968 | None:intergenic | 40.0% |
| !! | ATGGAGTGCTGAAGAAAATG+AGG | + | chr1_1:34852948-34852967 | Msa0019900:CDS | 40.0% |
| GCTGAAGAAAATGAGGTTTC+CGG | + | chr1_1:34852955-34852974 | Msa0019900:CDS | 40.0% | |
| ATGGACATCCTTCAGTGTAT+AGG | + | chr1_1:34853020-34853039 | Msa0019900:CDS | 40.0% | |
| ACATCCTTCAGTGTATAGGA+AGG | + | chr1_1:34853024-34853043 | Msa0019900:CDS | 40.0% | |
| AATGACTGCAATCAGAGGAA+TGG | - | chr1_1:34853081-34853100 | None:intergenic | 40.0% | |
| ATTCCTCTGATTGCAGTCAT+TGG | + | chr1_1:34853080-34853099 | Msa0019900:CDS | 40.0% | |
| ! | TCTAAGGGAAGTGTAACAGA+AGG | - | chr1_1:34853248-34853267 | None:intergenic | 40.0% |
| ! | GTAATGGAAGGACCTTAAGT+TGG | + | chr1_1:34853282-34853301 | Msa0019900:three_prime_UTR | 40.0% |
| GTTACAATGCTGCCAACTTA+AGG | - | chr1_1:34853297-34853316 | None:intergenic | 40.0% | |
| TGGCAGCATTGTAACCATAT+AGG | + | chr1_1:34853302-34853321 | Msa0019900:three_prime_UTR | 40.0% | |
| AGATGAACGTGAAATCGACA+CGG | + | chr1_1:34853367-34853386 | Msa0019900:three_prime_UTR | 40.0% | |
| GTATCTTGGATTCTGCAACT+TGG | + | chr1_1:34853446-34853465 | Msa0019900:three_prime_UTR | 40.0% | |
| !! | GCAGAAAGTTGTGCTAGTTT+TGG | + | chr1_1:34853518-34853537 | Msa0019900:three_prime_UTR | 40.0% |
| !! | GTTTTTCTGTGTAGGTTGAG+GGG | + | chr1_1:34853566-34853585 | Msa0019900:three_prime_UTR | 40.0% |
| !! | TTTTTCTGTGTAGGTTGAGG+GGG | + | chr1_1:34853567-34853586 | Msa0019900:three_prime_UTR | 40.0% |
| ! | GGCCCAAATGGATTTCATTT+AGG | - | chr1_1:34853695-34853714 | None:intergenic | 40.0% |
| !! | AGAGTGAAAAGGGTTGGTGT+TGG | - | chr1_1:34850000-34850019 | None:intergenic | 45.0% |
| GTTGCCATGGAAGAAGCTAA+GGG | - | chr1_1:34850062-34850081 | None:intergenic | 45.0% | |
| TGTTGCCATGGAAGAAGCTA+AGG | - | chr1_1:34850063-34850082 | None:intergenic | 45.0% | |
| !! | ATGAGTCATTGGTGTTGCCA+TGG | - | chr1_1:34850075-34850094 | None:intergenic | 45.0% |
| TGGACCCACAAGATGATGTT+GGG | + | chr1_1:34850147-34850166 | Msa0019900:CDS | 45.0% | |
| GGGCAGTTAGGATCATAAAG+AGG | - | chr1_1:34850275-34850294 | None:intergenic | 45.0% | |
| ATCTCACTGTTCAATTGCGG+GGG | - | chr1_1:34850868-34850887 | None:intergenic | 45.0% | |
| GAATTAGTCGGTCTTTAGGC+CGG | + | chr1_1:34850898-34850917 | Msa0019900:intron | 45.0% | |
| TGAGTAGGGGAGTGGAATAT+GGG | + | chr1_1:34851106-34851125 | Msa0019900:intron | 45.0% | |
| ! | ATCTGAGATCAATGGAGGGT+TGG | - | chr1_1:34851148-34851167 | None:intergenic | 45.0% |
| GTACGGATATGGTAAGCTTG+TGG | + | chr1_1:34851229-34851248 | Msa0019900:intron | 45.0% | |
| !! | GTCCTTGTGACTTGGTAATG+CGG | - | chr1_1:34851414-34851433 | None:intergenic | 45.0% |
| GCAAAATGGTCCTTGTGACT+TGG | - | chr1_1:34851422-34851441 | None:intergenic | 45.0% | |
| ! | GTCACCCTTTTTCTACCAGT+TGG | - | chr1_1:34851806-34851825 | None:intergenic | 45.0% |
| AGAAAAAGGGTGACCTACCA+TGG | + | chr1_1:34851812-34851831 | Msa0019900:CDS | 45.0% | |
| ATTGAATGGAAGGCCATTGC+AGG | - | chr1_1:34851839-34851858 | None:intergenic | 45.0% | |
| TGCAATGGCCTTCCATTCAA+TGG | + | chr1_1:34851838-34851857 | Msa0019900:CDS | 45.0% | |
| GGGATGATATGAAGAGAAGG+TGG | - | chr1_1:34852153-34852172 | None:intergenic | 45.0% | |
| !! | CCATGTCCGTAAGCTGATTT+TGG | - | chr1_1:34852350-34852369 | None:intergenic | 45.0% |
| CCAAAATCAGCTTACGGACA+TGG | + | chr1_1:34852347-34852366 | Msa0019900:intron | 45.0% | |
| AGGTGGGATTACTACAAGGA+GGG | + | chr1_1:34852461-34852480 | Msa0019900:intron | 45.0% | |
| ! | TAGAAGCTCAATGGCTGGTT+TGG | - | chr1_1:34852765-34852784 | None:intergenic | 45.0% |
| TGCAGGCTGAAAAATGGTAG+AGG | - | chr1_1:34852896-34852915 | None:intergenic | 45.0% | |
| GTTGCCTTCCTATACACTGA+AGG | - | chr1_1:34853031-34853050 | None:intergenic | 45.0% | |
| TCCAAATATCAGGCACACCA+GGG | - | chr1_1:34853111-34853130 | None:intergenic | 45.0% | |
| TTCCAAATATCAGGCACACC+AGG | - | chr1_1:34853112-34853131 | None:intergenic | 45.0% | |
| ATCGACACGGAGGATTTGAT+TGG | + | chr1_1:34853380-34853399 | Msa0019900:three_prime_UTR | 45.0% | |
| TCGACACGGAGGATTTGATT+GGG | + | chr1_1:34853381-34853400 | Msa0019900:three_prime_UTR | 45.0% | |
| !! | TGATTGGGAAAAGTTGGTGG+AGG | + | chr1_1:34853396-34853415 | Msa0019900:three_prime_UTR | 45.0% |
| ! | GCAGTCTGGTTTGTGTATCT+TGG | + | chr1_1:34853432-34853451 | Msa0019900:three_prime_UTR | 45.0% |
| CTTGGATTCTGCAACTTGGT+TGG | + | chr1_1:34853450-34853469 | Msa0019900:three_prime_UTR | 45.0% | |
| CACTCCCTTAGCTTCTTCCA+TGG | + | chr1_1:34850055-34850074 | Msa0019900:exon | 50.0% | |
| CTGGACCCACAAGATGATGT+TGG | + | chr1_1:34850146-34850165 | Msa0019900:CDS | 50.0% | |
| AAGTGGAAGTGGAAGCCAAG+TGG | + | chr1_1:34850353-34850372 | Msa0019900:CDS | 50.0% | |
| GTGGCAATGTGAACAGACCT+TGG | - | chr1_1:34850389-34850408 | None:intergenic | 50.0% | |
| TCTCACTGTTCAATTGCGGG+GGG | - | chr1_1:34850867-34850886 | None:intergenic | 50.0% | |
| ATCAACTCTGAGTAGGGGAG+TGG | + | chr1_1:34851098-34851117 | Msa0019900:intron | 50.0% | |
| CTGAGTAGGGGAGTGGAATA+TGG | + | chr1_1:34851105-34851124 | Msa0019900:intron | 50.0% | |
| CAGGTGGGATTACTACAAGG+AGG | + | chr1_1:34852460-34852479 | Msa0019900:intron | 50.0% | |
| AAGGACTGAGTACATGGGCA+AGG | + | chr1_1:34852528-34852547 | Msa0019900:CDS | 50.0% | |
| ACTGAGTACATGGGCAAGGT+GGG | + | chr1_1:34852532-34852551 | Msa0019900:CDS | 50.0% | |
| GCATGTCACCTAGGCATAAC+AGG | + | chr1_1:34852600-34852619 | Msa0019900:CDS | 50.0% | |
| ! | GTTCAGGAGCATGTTGTTGC+AGG | - | chr1_1:34852913-34852932 | None:intergenic | 50.0% |
| ATGTCCATCTCTGCGTAAGG+CGG | - | chr1_1:34853008-34853027 | None:intergenic | 50.0% | |
| AGGATGTCCATCTCTGCGTA+AGG | - | chr1_1:34853011-34853030 | None:intergenic | 50.0% | |
| GCACCAATGACTGCAATCAG+AGG | - | chr1_1:34853086-34853105 | None:intergenic | 50.0% | |
| AAATATCAGGCACACCAGGG+AGG | - | chr1_1:34853108-34853127 | None:intergenic | 50.0% | |
| TCCCTGGTGTGCCTGATATT+TGG | + | chr1_1:34853107-34853126 | Msa0019900:CDS | 50.0% | |
| TGAACGTGAAATCGACACGG+AGG | + | chr1_1:34853370-34853389 | Msa0019900:three_prime_UTR | 50.0% | |
| GTATCAAAGCTGCTGCAGTC+TGG | + | chr1_1:34853418-34853437 | Msa0019900:three_prime_UTR | 50.0% | |
| TGCAACTTGGTTGGCGTTCT+CGG | + | chr1_1:34853459-34853478 | Msa0019900:three_prime_UTR | 50.0% | |
| CGCCGCATTACCAAGTCACA+AGG | + | chr1_1:34851409-34851428 | Msa0019900:intron | 55.0% | |
| GACCTACCATGGACCTGCAA+TGG | + | chr1_1:34851823-34851842 | Msa0019900:CDS | 55.0% | |
| GACTGAGTACATGGGCAAGG+TGG | + | chr1_1:34852531-34852550 | Msa0019900:CDS | 55.0% | |
| ATGACCGCCTTACGCAGAGA+TGG | + | chr1_1:34853001-34853020 | Msa0019900:CDS | 55.0% | |
| AACTTGGTTGGCGTTCTCGG+TGG | + | chr1_1:34853462-34853481 | Msa0019900:three_prime_UTR | 55.0% | |
| ! | TGTGTAGGTTGAGGGGGCTT+TGG | + | chr1_1:34853573-34853592 | Msa0019900:three_prime_UTR | 55.0% |
| GGCCATTGCAGGTCCATGGT+AGG | - | chr1_1:34851828-34851847 | None:intergenic | 60.0% | |
| GGAAGGCCATTGCAGGTCCA+TGG | - | chr1_1:34851832-34851851 | None:intergenic | 60.0% | |
| GAGTACATGGGCAAGGTGGG+TGG | + | chr1_1:34852535-34852554 | Msa0019900:CDS | 60.0% | |
| ! | TGCAGTCATTGGTGCCTCCC+TGG | + | chr1_1:34853091-34853110 | Msa0019900:CDS | 60.0% |
| ! | TCTCGGTGGTGATGCTGGTG+TGG | + | chr1_1:34853476-34853495 | Msa0019900:three_prime_UTR | 60.0% |
| ! | GTTGAGGGGGCTTTGGTGTG+TGG | + | chr1_1:34853580-34853599 | Msa0019900:three_prime_UTR | 60.0% |
| ! | GGCGTTCTCGGTGGTGATGC+TGG | + | chr1_1:34853471-34853490 | Msa0019900:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 34849964 | 34853817 | 34849964 | ID=Msa0019900;Name=Msa0019900 |
| chr1_1 | mRNA | 34849964 | 34853817 | 34849964 | ID=Msa0019900-mRNA-1;Parent=Msa0019900;Name=Msa0019900-mRNA-1;_AED=0.10;_eAED=0.10;_QI=110|1|1|1|0.8|0.66|6|634|375 |
| chr1_1 | exon | 34849964 | 34850390 | 34849964 | ID=Msa0019900-mRNA-1:exon:10999;Parent=Msa0019900-mRNA-1 |
| chr1_1 | exon | 34851688 | 34851859 | 34851688 | ID=Msa0019900-mRNA-1:exon:11000;Parent=Msa0019900-mRNA-1 |
| chr1_1 | exon | 34851939 | 34852120 | 34851939 | ID=Msa0019900-mRNA-1:exon:11001;Parent=Msa0019900-mRNA-1 |
| chr1_1 | exon | 34852463 | 34852621 | 34852463 | ID=Msa0019900-mRNA-1:exon:11002;Parent=Msa0019900-mRNA-1 |
| chr1_1 | exon | 34852859 | 34853174 | 34852859 | ID=Msa0019900-mRNA-1:exon:11003;Parent=Msa0019900-mRNA-1 |
| chr1_1 | exon | 34853202 | 34853817 | 34853202 | ID=Msa0019900-mRNA-1:exon:11004;Parent=Msa0019900-mRNA-1 |
| chr1_1 | five_prime_UTR | 34849964 | 34850073 | 34849964 | ID=Msa0019900-mRNA-1:five_prime_utr;Parent=Msa0019900-mRNA-1 |
| chr1_1 | CDS | 34850074 | 34850390 | 34850074 | ID=Msa0019900-mRNA-1:cds;Parent=Msa0019900-mRNA-1 |
| chr1_1 | CDS | 34851688 | 34851859 | 34851688 | ID=Msa0019900-mRNA-1:cds;Parent=Msa0019900-mRNA-1 |
| chr1_1 | CDS | 34851939 | 34852120 | 34851939 | ID=Msa0019900-mRNA-1:cds;Parent=Msa0019900-mRNA-1 |
| chr1_1 | CDS | 34852463 | 34852621 | 34852463 | ID=Msa0019900-mRNA-1:cds;Parent=Msa0019900-mRNA-1 |
| chr1_1 | CDS | 34852859 | 34853156 | 34852859 | ID=Msa0019900-mRNA-1:cds;Parent=Msa0019900-mRNA-1 |
| chr1_1 | three_prime_UTR | 34853157 | 34853174 | 34853157 | ID=Msa0019900-mRNA-1:three_prime_utr;Parent=Msa0019900-mRNA-1 |
| chr1_1 | three_prime_UTR | 34853202 | 34853817 | 34853202 | ID=Msa0019900-mRNA-1:three_prime_utr;Parent=Msa0019900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
