Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0109690 | XP_013467066.1 | 94.154 | 325 | 18 | 1 | 1 | 324 | 747 | 1071 | 0.0 | 609 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0109690 | A0A072VGZ7 | 94.154 | 325 | 18 | 1 | 1 | 324 | 785 | 1109 | 0.0 | 609 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004860 | Msa0109690 | 0.837632 | 4.635497e-57 | -8.615850e-47 |
| Msa0004920 | Msa0109690 | 0.839102 | 1.936533e-57 | -8.615850e-47 |
| Msa0007440 | Msa0109690 | 0.814171 | 1.764789e-51 | -8.615850e-47 |
| Msa0011170 | Msa0109690 | 0.820060 | 8.374460e-53 | -8.615850e-47 |
| Msa0015610 | Msa0109690 | 0.837946 | 3.850061e-57 | -8.615850e-47 |
| Msa0020930 | Msa0109690 | 0.849704 | 2.725191e-60 | -8.615850e-47 |
| Msa0028660 | Msa0109690 | 0.801652 | 8.140135e-49 | -8.615850e-47 |
| Msa0031180 | Msa0109690 | 0.806667 | 7.359278e-50 | -8.615850e-47 |
| Msa0033980 | Msa0109690 | 0.807562 | 4.757704e-50 | -8.615850e-47 |
| Msa0036140 | Msa0109690 | 0.830509 | 2.821964e-55 | -8.615850e-47 |
| Msa0043980 | Msa0109690 | 0.812917 | 3.331214e-51 | -8.615850e-47 |
| Msa0051770 | Msa0109690 | 0.851039 | 1.150593e-60 | -8.615850e-47 |
| Msa0056030 | Msa0109690 | 0.846498 | 2.092043e-59 | -8.615850e-47 |
| Msa0067620 | Msa0109690 | 0.802790 | 4.746536e-49 | -8.615850e-47 |
| Msa0068680 | Msa0109690 | 0.810786 | 9.695806e-51 | -8.615850e-47 |
| Msa0074700 | Msa0109690 | 0.804124 | 2.510882e-49 | -8.615850e-47 |
| Msa0081930 | Msa0109690 | 0.825022 | 5.879989e-54 | -8.615850e-47 |
| Msa0083280 | Msa0109690 | 0.816587 | 5.121948e-52 | -8.615850e-47 |
| Msa0084080 | Msa0109690 | 0.827451 | 1.553431e-54 | -8.615850e-47 |
| Msa0084380 | Msa0109690 | 0.810776 | 9.743752e-51 | -8.615850e-47 |
| Msa0086420 | Msa0109690 | 0.803332 | 3.666716e-49 | -8.615850e-47 |
| Msa0090360 | Msa0109690 | 0.845771 | 3.298853e-59 | -8.615850e-47 |
| Msa0095560 | Msa0109690 | 0.830298 | 3.176680e-55 | -8.615850e-47 |
| Msa0096030 | Msa0109690 | 0.807685 | 4.480332e-50 | -8.615850e-47 |
| Msa0109690 | Msa0112770 | 0.800689 | 1.280766e-48 | -8.615850e-47 |
| Msa0109690 | Msa0113750 | 0.817715 | 2.855714e-52 | -8.615850e-47 |
| Msa0109690 | Msa0114060 | 0.812906 | 3.348192e-51 | -8.615850e-47 |
| Msa0109690 | Msa0119960 | 0.814804 | 1.278584e-51 | -8.615850e-47 |
| Msa0109690 | Msa0120040 | -0.810840 | 9.437683e-51 | -8.615850e-47 |
| Msa0109690 | Msa0125880 | 0.803958 | 2.718941e-49 | -8.615850e-47 |
| Msa0109690 | Msa0128020 | 0.811380 | 7.207137e-51 | -8.615850e-47 |
| Msa0109690 | Msa0137840 | 0.842178 | 3.030806e-58 | -8.615850e-47 |
| Msa0109690 | Msa0159930 | 0.834100 | 3.643746e-56 | -8.615850e-47 |
| Msa0109690 | Msa0166870 | 0.821641 | 3.624512e-53 | -8.615850e-47 |
| Msa0109690 | Msa0170570 | 0.810683 | 1.020234e-50 | -8.615850e-47 |
| Msa0109690 | Msa0178570 | 0.807841 | 4.150177e-50 | -8.615850e-47 |
| Msa0109690 | Msa0178930 | 0.804511 | 2.085703e-49 | -8.615850e-47 |
| Msa0109690 | Msa0183050 | 0.820574 | 6.382941e-53 | -8.615850e-47 |
| Msa0109690 | Msa0184040 | 0.843645 | 1.233624e-58 | -8.615850e-47 |
| Msa0109690 | Msa0184780 | 0.828235 | 1.006373e-54 | -8.615850e-47 |
| Msa0109690 | Msa0188830 | 0.818937 | 1.510357e-52 | -8.615850e-47 |
| Msa0109690 | Msa0195980 | 0.800922 | 1.148157e-48 | -8.615850e-47 |
| Msa0109690 | Msa0206010 | 0.807382 | 5.193518e-50 | -8.615850e-47 |
| Msa0109690 | Msa0210450 | 0.835733 | 1.412920e-56 | -8.615850e-47 |
| Msa0109690 | Msa0216240 | 0.828414 | 9.112188e-55 | -8.615850e-47 |
| Msa0109690 | Msa0217680 | 0.847697 | 9.816948e-60 | -8.615850e-47 |
| Msa0109690 | Msa0220580 | 0.831052 | 2.077360e-55 | -8.615850e-47 |
| Msa0109690 | Msa0222620 | 0.803274 | 3.769420e-49 | -8.615850e-47 |
| Msa0109690 | Msa0224030 | 0.801419 | 9.085384e-49 | -8.615850e-47 |
| Msa0109690 | Msa0241390 | 0.801888 | 7.279520e-49 | -8.615850e-47 |
| Msa0109690 | Msa0243710 | 0.816439 | 5.526308e-52 | -8.615850e-47 |
| Msa0109690 | Msa0249200 | 0.819974 | 8.760165e-53 | -8.615850e-47 |
| Msa0109690 | Msa0257500 | 0.832839 | 7.518480e-56 | -8.615850e-47 |
| Msa0109690 | Msa0260680 | 0.819099 | 1.387086e-52 | -8.615850e-47 |
| Msa0109690 | Msa0264690 | 0.804381 | 2.219917e-49 | -8.615850e-47 |
| Msa0109690 | Msa0264930 | 0.801532 | 8.612222e-49 | -8.615850e-47 |
| Msa0109690 | Msa0270100 | 0.827172 | 1.811300e-54 | -8.615850e-47 |
| Msa0109690 | Msa0279220 | 0.806403 | 8.368202e-50 | -8.615850e-47 |
| Msa0109690 | Msa0279240 | 0.809705 | 1.657940e-50 | -8.615850e-47 |
| Msa0109690 | Msa0280090 | 0.816499 | 5.358176e-52 | -8.615850e-47 |
| Msa0109690 | Msa0287410 | 0.836894 | 7.160963e-57 | -8.615850e-47 |
| Msa0109690 | Msa0287650 | 0.807985 | 3.868714e-50 | -8.615850e-47 |
| Msa0109690 | Msa0291500 | 0.800530 | 1.380493e-48 | -8.615850e-47 |
| Msa0109690 | Msa0292120 | 0.817681 | 2.906697e-52 | -8.615850e-47 |
| Msa0109690 | Msa0309770 | 0.865715 | 4.830908e-65 | -8.615850e-47 |
| Msa0109690 | Msa0318980 | 0.812536 | 4.035834e-51 | -8.615850e-47 |
| Msa0109690 | Msa0326110 | 0.801167 | 1.023075e-48 | -8.615850e-47 |
| Msa0109690 | Msa0326520 | 0.809913 | 1.495508e-50 | -8.615850e-47 |
| Msa0109690 | Msa0333030 | 0.807801 | 4.232587e-50 | -8.615850e-47 |
| Msa0109690 | Msa0334360 | 0.823634 | 1.246501e-53 | -8.615850e-47 |
| Msa0109690 | Msa0344540 | 0.820266 | 7.512898e-53 | -8.615850e-47 |
| Msa0109690 | Msa0359560 | 0.806597 | 7.615967e-50 | -8.615850e-47 |
| Msa0109690 | Msa0363790 | 0.804996 | 1.652085e-49 | -8.615850e-47 |
| Msa0109690 | Msa0372660 | 0.802348 | 5.853416e-49 | -8.615850e-47 |
| Msa0109690 | Msa0376300 | 0.810867 | 9.308257e-51 | -8.615850e-47 |
| Msa0109690 | Msa0376350 | 0.800858 | 1.182967e-48 | -8.615850e-47 |
| Msa0109690 | Msa0376910 | 0.811698 | 6.145253e-51 | -8.615850e-47 |
| Msa0109690 | Msa0383800 | 0.815058 | 1.122683e-51 | -8.615850e-47 |
| Msa0109690 | Msa0385490 | 0.802518 | 5.400004e-49 | -8.615850e-47 |
| Msa0109690 | Msa0389340 | 0.823962 | 1.043923e-53 | -8.615850e-47 |
| Msa0109690 | Msa0406200 | 0.800411 | 1.459340e-48 | -8.615850e-47 |
| Msa0109690 | Msa0410650 | 0.800220 | 1.596349e-48 | -8.615850e-47 |
| Msa0109690 | Msa0417270 | 0.802637 | 5.104816e-49 | -8.615850e-47 |
| Msa0109690 | Msa0433360 | 0.805773 | 1.135442e-49 | -8.615850e-47 |
| Msa0109690 | Msa0433640 | 0.801573 | 8.448915e-49 | -8.615850e-47 |
| Msa0109690 | Msa0440750 | 0.802541 | 5.342162e-49 | -8.615850e-47 |
| Msa0109690 | Msa0442200 | 0.812901 | 3.356712e-51 | -8.615850e-47 |
| Msa0109690 | Msa0442610 | 0.812283 | 4.583042e-51 | -8.615850e-47 |
| Msa0109690 | Msa0465550 | 0.813827 | 2.101485e-51 | -8.615850e-47 |
| Msa0109690 | Msa0466250 | 0.802466 | 5.537288e-49 | -8.615850e-47 |
| Msa0109690 | Msa0470690 | 0.802282 | 6.041884e-49 | -8.615850e-47 |
| Msa0109690 | Msa0471900 | 0.804824 | 1.794112e-49 | -8.615850e-47 |
| Msa0109690 | Msa0477080 | 0.819578 | 1.079129e-52 | -8.615850e-47 |
| Msa0109690 | Msa0477130 | -0.807903 | 4.027144e-50 | -8.615850e-47 |
| Msa0109690 | Msa0479170 | 0.811927 | 5.481195e-51 | -8.615850e-47 |
| Msa0109690 | Msa0479970 | 0.823111 | 1.651673e-53 | -8.615850e-47 |
| Msa0109690 | Msa0481530 | 0.833252 | 5.934193e-56 | -8.615850e-47 |
| Msa0109690 | Msa0484780 | 0.849323 | 3.480251e-60 | -8.615850e-47 |
| Msa0109690 | Msa0502880 | 0.835756 | 1.394597e-56 | -8.615850e-47 |
| Msa0109690 | Msa0503200 | 0.817391 | 3.378151e-52 | -8.615850e-47 |
| Msa0109690 | Msa0507680 | 0.807156 | 5.800972e-50 | -8.615850e-47 |
| Msa0109690 | Msa0521500 | 0.803347 | 3.639943e-49 | -8.615850e-47 |
| Msa0109690 | Msa0521540 | 0.801733 | 7.834122e-49 | -8.615850e-47 |
| Msa0109690 | Msa0523460 | 0.812380 | 4.365288e-51 | -8.615850e-47 |
| Msa0109690 | Msa0529890 | 0.804471 | 2.126627e-49 | -8.615850e-47 |
| Msa0109690 | Msa0539410 | 0.800259 | 1.567592e-48 | -8.615850e-47 |
| Msa0109690 | Msa0547360 | 0.806664 | 7.371160e-50 | -8.615850e-47 |
| Msa0109690 | Msa0548240 | 0.809024 | 2.321661e-50 | -8.615850e-47 |
| Msa0109690 | Msa0557070 | 0.810457 | 1.141910e-50 | -8.615850e-47 |
| Msa0109690 | Msa0557320 | 0.803578 | 3.261183e-49 | -8.615850e-47 |
| Msa0109690 | Msa0558230 | 0.837780 | 4.248006e-57 | -8.615850e-47 |
| Msa0109690 | Msa0563840 | 0.813342 | 2.686766e-51 | -8.615850e-47 |
| Msa0109690 | Msa0564130 | 0.801260 | 9.791232e-49 | -8.615850e-47 |
| Msa0109690 | Msa0565730 | 0.811876 | 5.622386e-51 | -8.615850e-47 |
| Msa0109690 | Msa0577500 | 0.823695 | 1.206085e-53 | -8.615850e-47 |
| Msa0109690 | Msa0585560 | 0.817653 | 2.948824e-52 | -8.615850e-47 |
| Msa0109690 | Msa0600600 | 0.804386 | 2.214570e-49 | -8.615850e-47 |
| Msa0109690 | Msa0608710 | 0.811309 | 7.465433e-51 | -8.615850e-47 |
| Msa0109690 | Msa0610430 | 0.820118 | 8.118880e-53 | -8.615850e-47 |
| Msa0109690 | Msa0612960 | 0.847566 | 1.066623e-59 | -8.615850e-47 |
| Msa0109690 | Msa0616160 | 0.800632 | 1.315939e-48 | -8.615850e-47 |
| Msa0109690 | Msa0617580 | 0.805428 | 1.341582e-49 | -8.615850e-47 |
| Msa0109690 | Msa0617640 | 0.816369 | 5.729002e-52 | -8.615850e-47 |
| Msa0109690 | Msa0625720 | 0.808163 | 3.544085e-50 | -8.615850e-47 |
| Msa0109690 | Msa0641190 | 0.800892 | 1.164598e-48 | -8.615850e-47 |
| Msa0109690 | Msa0643180 | 0.824599 | 7.395595e-54 | -8.615850e-47 |
| Msa0109690 | Msa0649350 | 0.804457 | 2.140477e-49 | -8.615850e-47 |
| Msa0109690 | Msa0657970 | 0.803389 | 3.568421e-49 | -8.615850e-47 |
| Msa0109690 | Msa0663240 | 0.804284 | 2.325578e-49 | -8.615850e-47 |
| Msa0109690 | Msa0663390 | 0.821454 | 4.002325e-53 | -8.615850e-47 |
| Msa0109690 | Msa0667050 | 0.810042 | 1.402791e-50 | -8.615850e-47 |
| Msa0109690 | Msa0679710 | 0.807000 | 6.258643e-50 | -8.615850e-47 |
| Msa0109690 | Msa0682900 | 0.804468 | 2.129040e-49 | -8.615850e-47 |
| Msa0109690 | Msa0688480 | 0.803789 | 2.947564e-49 | -8.615850e-47 |
| Msa0109690 | Msa0689800 | 0.813763 | 2.171078e-51 | -8.615850e-47 |
| Msa0109690 | Msa0691900 | 0.828900 | 6.949830e-55 | -8.615850e-47 |
| Msa0109690 | Msa0692230 | 0.803618 | 3.198239e-49 | -8.615850e-47 |
| Msa0109690 | Msa0692950 | 0.803837 | 2.881096e-49 | -8.615850e-47 |
| Msa0109690 | Msa0693380 | 0.835413 | 1.702812e-56 | -8.615850e-47 |
| Msa0109690 | Msa0697940 | 0.810214 | 1.288487e-50 | -8.615850e-47 |
| Msa0109690 | Msa0698400 | 0.813476 | 2.510612e-51 | -8.615850e-47 |
| Msa0109690 | Msa0711780 | 0.810724 | 9.998458e-51 | -8.615850e-47 |
| Msa0109690 | Msa0716840 | 0.800862 | 1.180885e-48 | -8.615850e-47 |
| Msa0109690 | Msa0721280 | 0.803239 | 3.833733e-49 | -8.615850e-47 |
| Msa0109690 | Msa0721970 | 0.801394 | 9.193739e-49 | -8.615850e-47 |
| Msa0109690 | Msa0737560 | 0.803615 | 3.203434e-49 | -8.615850e-47 |
| Msa0109690 | Msa0740510 | 0.818075 | 2.367901e-52 | -8.615850e-47 |
| Msa0109690 | Msa0742750 | 0.834254 | 3.332612e-56 | -8.615850e-47 |
| Msa0109690 | Msa0744040 | 0.813297 | 2.748598e-51 | -8.615850e-47 |
| Msa0109690 | Msa0748430 | 0.808187 | 3.502727e-50 | -8.615850e-47 |
| Msa0109690 | Msa0751850 | 0.811867 | 5.646340e-51 | -8.615850e-47 |
| Msa0109690 | Msa0769920 | 0.821728 | 3.460296e-53 | -8.615850e-47 |
| Msa0109690 | Msa0770200 | 0.801009 | 1.102138e-48 | -8.615850e-47 |
| Msa0109690 | Msa0779690 | 0.802071 | 6.674927e-49 | -8.615850e-47 |
| Msa0109690 | Msa0790510 | 0.826946 | 2.052233e-54 | -8.615850e-47 |
| Msa0109690 | Msa0794670 | 0.817547 | 3.116917e-52 | -8.615850e-47 |
| Msa0109690 | Msa0795080 | 0.827149 | 1.835075e-54 | -8.615850e-47 |
| Msa0109690 | Msa0796700 | 0.824286 | 8.763789e-54 | -8.615850e-47 |
| Msa0109690 | Msa0808270 | 0.813851 | 2.076693e-51 | -8.615850e-47 |
| Msa0109690 | Msa0816590 | 0.820904 | 5.359713e-53 | -8.615850e-47 |
| Msa0109690 | Msa0816700 | 0.800156 | 1.645097e-48 | -8.615850e-47 |
| Msa0109690 | Msa0820770 | 0.814558 | 1.449493e-51 | -8.615850e-47 |
| Msa0109690 | Msa0832150 | 0.818110 | 2.326172e-52 | -8.615850e-47 |
| Msa0109690 | Msa0833460 | 0.806477 | 8.071806e-50 | -8.615850e-47 |
| Msa0109690 | Msa0840820 | 0.806197 | 9.245671e-50 | -8.615850e-47 |
| Msa0109690 | Msa0861090 | 0.811031 | 8.578351e-51 | -8.615850e-47 |
| Msa0109690 | Msa0862110 | 0.802034 | 6.795397e-49 | -8.615850e-47 |
| Msa0109690 | Msa0869100 | 0.805364 | 1.383712e-49 | -8.615850e-47 |
| Msa0109690 | Msa0895120 | 0.812274 | 4.604684e-51 | -8.615850e-47 |
| Msa0109690 | Msa0898750 | 0.800102 | 1.686916e-48 | -8.615850e-47 |
| Msa0109690 | Msa0920610 | 0.803859 | 2.851079e-49 | -8.615850e-47 |
| Msa0109690 | Msa0933230 | 0.823643 | 1.240004e-53 | -8.615850e-47 |
| Msa0109690 | Msa0933310 | 0.822574 | 2.202351e-53 | -8.615850e-47 |
| Msa0109690 | Msa0939000 | 0.806071 | 9.826731e-50 | -8.615850e-47 |
| Msa0109690 | Msa0945970 | 0.817406 | 3.352546e-52 | -8.615850e-47 |
| Msa0109690 | Msa0964310 | 0.807057 | 6.087090e-50 | -8.615850e-47 |
| Msa0109690 | Msa0971090 | 0.827706 | 1.348717e-54 | -8.615850e-47 |
| Msa0109690 | Msa1017630 | 0.801205 | 1.004907e-48 | -8.615850e-47 |
| Msa0109690 | Msa1023920 | 0.804710 | 1.895694e-49 | -8.615850e-47 |
| Msa0109690 | Msa1034150 | 0.830703 | 2.529703e-55 | -8.615850e-47 |
| Msa0109690 | Msa1041210 | 0.819908 | 9.071780e-53 | -8.615850e-47 |
| Msa0109690 | Msa1050420 | 0.816064 | 6.703672e-52 | -8.615850e-47 |
| Msa0109690 | Msa1055410 | 0.811248 | 7.696794e-51 | -8.615850e-47 |
| Msa0109690 | Msa1055680 | 0.802876 | 4.555982e-49 | -8.615850e-47 |
| Msa0109690 | Msa1080270 | 0.806827 | 6.808388e-50 | -8.615850e-47 |
| Msa0109690 | Msa1081980 | 0.805240 | 1.468595e-49 | -8.615850e-47 |
| Msa0109690 | Msa1082500 | 0.846603 | 1.957980e-59 | -8.615850e-47 |
| Msa0109690 | Msa1085200 | 0.804124 | 2.510882e-49 | -8.615850e-47 |
| Msa0109690 | Msa1098400 | 0.800445 | 1.436657e-48 | -8.615850e-47 |
| Msa0109690 | Msa1098420 | 0.825272 | 5.132319e-54 | -8.615850e-47 |
| Msa0109690 | Msa1107900 | 0.804411 | 2.187913e-49 | -8.615850e-47 |
| Msa0109690 | Msa1110190 | 0.809649 | 1.704455e-50 | -8.615850e-47 |
| Msa0109690 | Msa1121440 | 0.826871 | 2.138526e-54 | -8.615850e-47 |
| Msa0109690 | Msa1125470 | 0.803925 | 2.761623e-49 | -8.615850e-47 |
| Msa0109690 | Msa1126450 | 0.800591 | 1.341633e-48 | -8.615850e-47 |
| Msa0109690 | Msa1128060 | 0.811007 | 8.681519e-51 | -8.615850e-47 |
| Msa0109690 | Msa1147280 | 0.809186 | 2.143307e-50 | -8.615850e-47 |
| Msa0109690 | Msa1147970 | 0.805263 | 1.452604e-49 | -8.615850e-47 |
| Msa0109690 | Msa1151720 | 0.813674 | 2.271770e-51 | -8.615850e-47 |
| Msa0109690 | Msa1154710 | 0.819981 | 8.729891e-53 | -8.615850e-47 |
| Msa0109690 | Msa1165920 | 0.835705 | 1.436011e-56 | -8.615850e-47 |
| Msa0109690 | Msa1170410 | 0.807294 | 5.421895e-50 | -8.615850e-47 |
| Msa0109690 | Msa1171870 | 0.803291 | 3.738870e-49 | -8.615850e-47 |
| Msa0109690 | Msa1199990 | 0.801950 | 7.070890e-49 | -8.615850e-47 |
| Msa0109690 | Msa1203010 | 0.811282 | 7.569511e-51 | -8.615850e-47 |
| Msa0109690 | Msa1204530 | 0.809667 | 1.689449e-50 | -8.615850e-47 |
| Msa0109690 | Msa1205370 | 0.805441 | 1.333181e-49 | -8.615850e-47 |
| Msa0109690 | Msa1214890 | 0.804507 | 2.089661e-49 | -8.615850e-47 |
| Msa0109690 | Msa1217470 | 0.812241 | 4.679779e-51 | -8.615850e-47 |
| Msa0109690 | Msa1228590 | 0.800987 | 1.113567e-48 | -8.615850e-47 |
| Msa0109690 | Msa1247250 | 0.808092 | 3.669484e-50 | -8.615850e-47 |
| Msa0109690 | Msa1254510 | 0.803310 | 3.706338e-49 | -8.615850e-47 |
| Msa0109690 | Msa1255290 | 0.827967 | 1.167444e-54 | -8.615850e-47 |
| Msa0109690 | Msa1276440 | 0.802335 | 5.890794e-49 | -8.615850e-47 |
| Msa0109690 | Msa1288420 | 0.804972 | 1.671229e-49 | -8.615850e-47 |
| Msa0109690 | Msa1296760 | 0.812108 | 5.004362e-51 | -8.615850e-47 |
| Msa0109690 | Msa1305660 | 0.843611 | 1.259724e-58 | -8.615850e-47 |
| Msa0109690 | Msa1306430 | 0.805528 | 1.278261e-49 | -8.615850e-47 |
| Msa0109690 | Msa1306840 | 0.820293 | 7.406147e-53 | -8.615850e-47 |
| Msa0109690 | Msa1330290 | 0.806006 | 1.014166e-49 | -8.615850e-47 |
| Msa0109690 | Msa1331000 | 0.814097 | 1.832715e-51 | -8.615850e-47 |
| Msa0109690 | Msa1331910 | 0.814192 | 1.745682e-51 | -8.615850e-47 |
| Msa0109690 | Msa1340260 | 0.827336 | 1.655289e-54 | -8.615850e-47 |
| Msa0109690 | Msa1340270 | 0.807487 | 4.933887e-50 | -8.615850e-47 |
| Msa0109690 | Msa1348880 | 0.809282 | 2.044089e-50 | -8.615850e-47 |
| Msa0109690 | Msa1348890 | 0.806274 | 8.909017e-50 | -8.615850e-47 |
| Msa0109690 | Msa1353980 | 0.844237 | 8.561536e-59 | -8.615850e-47 |
| Msa0109690 | Msa1357890 | 0.802569 | 5.271205e-49 | -8.615850e-47 |
| Msa0109690 | Msa1359040 | 0.807716 | 4.412216e-50 | -8.615850e-47 |
| Msa0109690 | Msa1366600 | 0.813628 | 2.324272e-51 | -8.615850e-47 |
| Msa0109690 | Msa1367750 | 0.837341 | 5.502665e-57 | -8.615850e-47 |
| Msa0109690 | Msa1368060 | 0.810302 | 1.233293e-50 | -8.615850e-47 |
| Msa0109690 | Msa1372240 | 0.800374 | 1.485428e-48 | -8.615850e-47 |
| Msa0109690 | Msa1373030 | 0.805001 | 1.648227e-49 | -8.615850e-47 |
| Msa0109690 | Msa1384350 | 0.816933 | 4.283937e-52 | -8.615850e-47 |
| Msa0109690 | Msa1385670 | 0.811337 | 7.362638e-51 | -8.615850e-47 |
| Msa0109690 | Msa1388860 | 0.834441 | 2.992335e-56 | -8.615850e-47 |
| Msa0109690 | Msa1389400 | 0.826815 | 2.205602e-54 | -8.615850e-47 |
| Msa0109690 | Msa1392260 | 0.816297 | 5.946736e-52 | -8.615850e-47 |
| Msa0109690 | Msa1394290 | 0.800036 | 1.739676e-48 | -8.615850e-47 |
| Msa0109690 | Msa1397120 | 0.820907 | 5.351099e-53 | -8.615850e-47 |
| Msa0109690 | Msa1403890 | 0.814543 | 1.460674e-51 | -8.615850e-47 |
| Msa0109690 | Msa1404300 | 0.802633 | 5.113986e-49 | -8.615850e-47 |
| Msa0109690 | Msa1411020 | 0.804314 | 2.292110e-49 | -8.615850e-47 |
| Msa0109690 | Msa1412890 | 0.807587 | 4.700802e-50 | -8.615850e-47 |
| Msa0109690 | Msa1414690 | 0.839296 | 1.724845e-57 | -8.615850e-47 |
| Msa0109690 | Msa1420290 | 0.807433 | 5.067312e-50 | -8.615850e-47 |
| Msa0109690 | Msa1424290 | 0.801981 | 6.967670e-49 | -8.615850e-47 |
| Msa0109690 | Msa1424450 | 0.830892 | 2.273375e-55 | -8.615850e-47 |
| Msa0109690 | Msa1426030 | 0.837233 | 5.865373e-57 | -8.615850e-47 |
| Msa0109690 | Msa1429900 | 0.826354 | 2.841005e-54 | -8.615850e-47 |
| Msa0109690 | Msa1433390 | 0.839733 | 1.327946e-57 | -8.615850e-47 |
| Msa0109690 | Msa1434350 | 0.802211 | 6.247256e-49 | -8.615850e-47 |
| Msa0109690 | Msa1435270 | 0.801395 | 9.188510e-49 | -8.615850e-47 |
| Msa0109690 | Msa1439320 | 0.806643 | 7.445396e-50 | -8.615850e-47 |
| Msa0109690 | Msa1442700 | 0.800659 | 1.299389e-48 | -8.615850e-47 |
| Msa0109690 | Msa1443850 | 0.843542 | 1.314593e-58 | -8.615850e-47 |
| Msa0109690 | Msa1444740 | 0.805991 | 1.021802e-49 | -8.615850e-47 |
| Msa0109690 | Msa1452240 | 0.806089 | 9.741933e-50 | -8.615850e-47 |
| Msa0109690 | Msa1454120 | 0.819434 | 1.163581e-52 | -8.615850e-47 |
| Msa0109690 | Msa1460050 | 0.835718 | 1.425503e-56 | -8.615850e-47 |
| Msa0109690 | Msa1461280 | 0.801401 | 9.162341e-49 | -8.615850e-47 |
| Msa0109690 | Msa1462290 | 0.801960 | 7.034427e-49 | -8.615850e-47 |
| Msa0109690 | Msa1466540 | 0.804828 | 1.791290e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0109690 | MtrunA17_Chr1g0166661 | 94.154 | 325 | 18 | 1 | 1 | 324 | 747 | 1071 | 0.0 | 609 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 81 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCCTTAATGTCCTTTC+TGG | 0.074338 | 1_3:-21747230 | None:intergenic |
| CACGGGAATCGAAGAAATTT+TGG | 0.222977 | 1_3:+21746559 | Msa0109690:CDS |
| TCCACTTGTTCCTTTAGAAT+TGG | 0.304513 | 1_3:-21746858 | None:intergenic |
| AGCAGTGGCTTTGCATGCTC+TGG | 0.328489 | 1_3:-21745495 | None:intergenic |
| AAACACGGTTCGTCCATTTC+AGG | 0.343902 | 1_3:+21747165 | Msa0109690:CDS |
| TGTAGTAGCATAATCAAGTT+TGG | 0.350096 | 1_3:+21747636 | Msa0109690:three_prime_UTR |
| GGAAGTATTAACAGTTGTTC+AGG | 0.353180 | 1_3:+21745286 | Msa0109690:CDS |
| GATAGTAAACCACCATCTTA+TGG | 0.353960 | 1_3:+21745468 | Msa0109690:CDS |
| CCAGAAAAGCCCTCCTGAAA+TGG | 0.361049 | 1_3:-21747178 | None:intergenic |
| TGGTTCCAGAAAGGACATTA+AGG | 0.366182 | 1_3:+21747225 | Msa0109690:CDS |
| GGAACCAACTAATTCTAAAC+TGG | 0.370521 | 1_3:-21747209 | None:intergenic |
| ATTATTGTCCTTGCAATGTC+TGG | 0.382246 | 1_3:-21746723 | None:intergenic |
| AACAGATTAATTAGTCAGAT+TGG | 0.398603 | 1_3:+21747504 | Msa0109690:three_prime_UTR |
| GTAATTAAAGACTATACGTT+TGG | 0.400201 | 1_3:-21747884 | None:intergenic |
| TGTAACTCTGGATCATCATT+AGG | 0.413072 | 1_3:-21747079 | None:intergenic |
| CTCTGAGTCTATACAGAGAA+AGG | 0.429603 | 1_3:+21747401 | Msa0109690:CDS |
| TTAGTAACAGTGTGTGTGTC+TGG | 0.432948 | 1_3:-21746797 | None:intergenic |
| AGCTGCTGATCGACATGCTT+CGG | 0.433768 | 1_3:-21747323 | None:intergenic |
| GAAACCGAAGTCAAAACATT+AGG | 0.435604 | 1_3:-21747714 | None:intergenic |
| CATTCAAGGATGTCCTGATC+AGG | 0.436067 | 1_3:+21747048 | Msa0109690:CDS |
| TATAATCATGTATTTGAAGA+AGG | 0.438748 | 1_3:+21747274 | Msa0109690:CDS |
| GGCCACATGAATTGATTTAA+CGG | 0.449065 | 1_3:-21746702 | None:intergenic |
| AAAGCTTGTGCGGGTTTGAA+TGG | 0.460255 | 1_3:+21745248 | Msa0109690:five_prime_UTR |
| CAAAGAGCCAACACAAGTAC+TGG | 0.466512 | 1_3:+21745518 | Msa0109690:CDS |
| GATGCCAGTTTAGAATTAGT+TGG | 0.467941 | 1_3:+21747205 | Msa0109690:CDS |
| TTGCCTAGTAGTACCATTCA+AGG | 0.469110 | 1_3:+21747034 | Msa0109690:CDS |
| GGGTTTGAATGGTATGAGCC+TGG | 0.474594 | 1_3:+21745259 | Msa0109690:exon |
| TTGCATAGACGTCTCTTTGA+CGG | 0.476927 | 1_3:+21747352 | Msa0109690:CDS |
| TTAGGTGTATTCCCCTGATC+AGG | 0.484350 | 1_3:-21747061 | None:intergenic |
| TTAATCTCCAGTACTTGTGT+TGG | 0.494093 | 1_3:-21745525 | None:intergenic |
| CATCCTTGAATGGTACTACT+AGG | 0.494514 | 1_3:-21747037 | None:intergenic |
| AGAATTAGTTGGTTCCAGAA+AGG | 0.525428 | 1_3:+21747216 | Msa0109690:CDS |
| GCTACTTACTCCAATTCTAA+AGG | 0.528933 | 1_3:+21746848 | Msa0109690:CDS |
| GAATGGTATGAGCCTGGGAG+GGG | 0.529449 | 1_3:+21745265 | Msa0109690:exon |
| AATGAGCATTTCAAATTGAG+TGG | 0.531396 | 1_3:+21747431 | Msa0109690:exon |
| GTTACTATCAAAGCTTGTGC+GGG | 0.537008 | 1_3:+21745239 | Msa0109690:five_prime_UTR |
| TCCAATTCTAAAGGAACAAG+TGG | 0.538752 | 1_3:+21746857 | Msa0109690:CDS |
| CATTAAGGAAGAAGATGAGG+AGG | 0.538929 | 1_3:+21747240 | Msa0109690:CDS |
| TGAATCTAGTTTCTCTGAAG+AGG | 0.539721 | 1_3:+21746826 | Msa0109690:CDS |
| GGACATTAAGGAAGAAGATG+AGG | 0.547317 | 1_3:+21747237 | Msa0109690:CDS |
| TTCTAAAGGAACAAGTGGAA+TGG | 0.547559 | 1_3:+21746862 | Msa0109690:CDS |
| CTTACCACAGGTGATGCATC+AGG | 0.548034 | 1_3:-21745314 | None:intergenic |
| ATTCAAGGATGTCCTGATCA+GGG | 0.549232 | 1_3:+21747049 | Msa0109690:CDS |
| CTGATCAGGACATCCTTGAA+TGG | 0.551575 | 1_3:-21747047 | None:intergenic |
| ATTGATGTTGAAAAGACAAT+GGG | 0.558472 | 1_3:+21747124 | Msa0109690:CDS |
| ACCATGCTATCATGTAACTC+TGG | 0.559494 | 1_3:-21747091 | None:intergenic |
| GATTCAACAGTAATAGATGC+TGG | 0.559785 | 1_3:+21747001 | Msa0109690:CDS |
| TGTGTTGGCTCTTTGAGCAG+TGG | 0.560118 | 1_3:-21745510 | None:intergenic |
| TGTGTCTGGAGTAGGTTCTT+CGG | 0.567361 | 1_3:-21746783 | None:intergenic |
| GAAGAAGACAAAGATAATGA+TGG | 0.567773 | 1_3:+21746908 | Msa0109690:CDS |
| CTTCTAGCACTTTGTCACCA+TGG | 0.571294 | 1_3:-21746889 | None:intergenic |
| CACGGTTCGTCCATTTCAGG+AGG | 0.571329 | 1_3:+21747168 | Msa0109690:CDS |
| TGAATGGTATGAGCCTGGGA+GGG | 0.575492 | 1_3:+21745264 | Msa0109690:exon |
| GGTTTGAATGGTATGAGCCT+GGG | 0.578635 | 1_3:+21745260 | Msa0109690:exon |
| ACGTCTCTTTGACGGCAGAA+TGG | 0.580375 | 1_3:+21747360 | Msa0109690:CDS |
| TCATGTGGCCAGACATTGCA+AGG | 0.582086 | 1_3:+21746715 | Msa0109690:CDS |
| TAAAATTTGAATATTTAGAG+CGG | 0.583989 | 1_3:+21747576 | Msa0109690:three_prime_UTR |
| CAGTTTGAATTCATGTAGAG+TGG | 0.585766 | 1_3:-21747997 | None:intergenic |
| CTGTTAATACTTCCCCTCCC+AGG | 0.587392 | 1_3:-21745277 | None:intergenic |
| TCTATCATCTTTATCTGACA+CGG | 0.592596 | 1_3:+21746541 | Msa0109690:CDS |
| TGCTCTGGAATGCCATAAGA+TGG | 0.593271 | 1_3:-21745480 | None:intergenic |
| TCCAGAGTTACATGATAGCA+TGG | 0.595493 | 1_3:+21747090 | Msa0109690:CDS |
| CTATCATCTTTATCTGACAC+GGG | 0.595544 | 1_3:+21746542 | Msa0109690:CDS |
| TTGAATGGTATGAGCCTGGG+AGG | 0.600077 | 1_3:+21745263 | Msa0109690:exon |
| GACCGTTAAATCAATTCATG+TGG | 0.604281 | 1_3:+21746700 | Msa0109690:CDS |
| ACAGTGTGTGTGTCTGGAGT+AGG | 0.604688 | 1_3:-21746791 | None:intergenic |
| CACAAGATGCTCTTGACATG+TGG | 0.608945 | 1_3:-21746975 | None:intergenic |
| TATTGATGTTGAAAAGACAA+TGG | 0.611873 | 1_3:+21747123 | Msa0109690:CDS |
| ACAAGTGGAATGGAGTTCCA+TGG | 0.613269 | 1_3:+21746872 | Msa0109690:CDS |
| TGTTACTATCAAAGCTTGTG+CGG | 0.614885 | 1_3:+21745238 | Msa0109690:five_prime_UTR |
| TTCAAGGATGTCCTGATCAG+GGG | 0.620193 | 1_3:+21747050 | Msa0109690:CDS |
| CAATACAGACTCAGAAAACA+CGG | 0.635402 | 1_3:+21747150 | Msa0109690:CDS |
| ACGGTTCGTCCATTTCAGGA+GGG | 0.639891 | 1_3:+21747169 | Msa0109690:CDS |
| TCTTGAAGAAAATAAACATG+TGG | 0.643221 | 1_3:-21747857 | None:intergenic |
| ATGTACGATTGGAATGTGCA+AGG | 0.660221 | 1_3:+21746585 | Msa0109690:CDS |
| ATAGTCGTCCCTATCTATCG+AGG | 0.672172 | 1_3:-21747950 | None:intergenic |
| TCTTGCGTACTCAACAAGAA+CGG | 0.698477 | 1_3:-21747299 | None:intergenic |
| TCTTTCATGTAAGATCTGCG+AGG | 0.705553 | 1_3:+21747542 | Msa0109690:three_prime_UTR |
| TATGCCTGATGCATCACCTG+TGG | 0.720348 | 1_3:+21745310 | Msa0109690:CDS |
| TTAATTTGAATAGTTCACAG+TGG | 0.736809 | 1_3:+21746514 | Msa0109690:intron |
| TCTGGAATGCCATAAGATGG+TGG | 0.747907 | 1_3:-21745477 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTAAAATAAAAATATTTCC+AGG | + | chr1_3:21745440-21745459 | Msa0109690:intron | 15.0% |
| !! | TAAAATTTGAATATTTAGAG+CGG | + | chr1_3:21747576-21747595 | Msa0109690:three_prime_UTR | 15.0% |
| !! | AATACTGTTGTTAGTTAAAT+TGG | + | chr1_3:21746457-21746476 | Msa0109690:intron | 20.0% |
| !! | TTAAACAAATAGAACTCAAA+AGG | - | chr1_3:21746498-21746517 | None:intergenic | 20.0% |
| !!! | TTTCTTTTTAACTTCTGATT+TGG | - | chr1_3:21746756-21746775 | None:intergenic | 20.0% |
| !! | TATAATCATGTATTTGAAGA+AGG | + | chr1_3:21747274-21747293 | Msa0109690:CDS | 20.0% |
| !!! | ATTTTTAGATGTTAGTTAAC+AGG | + | chr1_3:21747833-21747852 | Msa0109690:three_prime_UTR | 20.0% |
| !!! | TTTTTAGATGTTAGTTAACA+GGG | + | chr1_3:21747834-21747853 | Msa0109690:three_prime_UTR | 20.0% |
| ! | ACAATAAAAATGAACATGTG+GGG | - | chr1_3:21745342-21745361 | None:intergenic | 25.0% |
| ! | GACAATAAAAATGAACATGT+GGG | - | chr1_3:21745343-21745362 | None:intergenic | 25.0% |
| ! | AGACAATAAAAATGAACATG+TGG | - | chr1_3:21745344-21745363 | None:intergenic | 25.0% |
| !! | TATTGTCTTTTTCCAATTCA+TGG | + | chr1_3:21745356-21745375 | Msa0109690:intron | 25.0% |
| ! | GAAGACTTAAATAGTAGAAA+GGG | - | chr1_3:21745627-21745646 | None:intergenic | 25.0% |
| ! | TGAAGACTTAAATAGTAGAA+AGG | - | chr1_3:21745628-21745647 | None:intergenic | 25.0% |
| ! | GTTCTATCATAAACCATATT+TGG | + | chr1_3:21745968-21745987 | Msa0109690:intron | 25.0% |
| ! | TATTAGAGAAACCATTAGAA+AGG | - | chr1_3:21746017-21746036 | None:intergenic | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | - | chr1_3:21746150-21746169 | None:intergenic | 25.0% |
| ! | GTTAGTTAAATTGGATGTTT+CGG | + | chr1_3:21746466-21746485 | Msa0109690:intron | 25.0% |
| !! | TTAATTTGAATAGTTCACAG+TGG | + | chr1_3:21746514-21746533 | Msa0109690:intron | 25.0% |
| !!! | TTCACAAATTTTGAAAACTG+TGG | - | chr1_3:21746636-21746655 | None:intergenic | 25.0% |
| !!! | TCTTTATTTTCTTGCAGATT+TGG | + | chr1_3:21746677-21746696 | Msa0109690:intron | 25.0% |
| !!! | CTTTATTTTCTTGCAGATTT+GGG | + | chr1_3:21746678-21746697 | Msa0109690:intron | 25.0% |
| ! | TCAGAAGTTAAAAAGAAAGT+AGG | + | chr1_3:21746758-21746777 | Msa0109690:CDS | 25.0% |
| ! | TATTGATGTTGAAAAGACAA+TGG | + | chr1_3:21747123-21747142 | Msa0109690:CDS | 25.0% |
| ! | ATTGATGTTGAAAAGACAAT+GGG | + | chr1_3:21747124-21747143 | Msa0109690:CDS | 25.0% |
| !!! | AGAACATAAAAAGTGTTATG+CGG | + | chr1_3:21747472-21747491 | Msa0109690:three_prime_UTR | 25.0% |
| ! | AACAGATTAATTAGTCAGAT+TGG | + | chr1_3:21747504-21747523 | Msa0109690:three_prime_UTR | 25.0% |
| !! | CTACTACATTTTTATCACAT+TGG | - | chr1_3:21747624-21747643 | None:intergenic | 25.0% |
| !!! | TTGGAGATATTTGTTATACA+AGG | + | chr1_3:21747770-21747789 | Msa0109690:intron | 25.0% |
| ! | TCTTGAAGAAAATAAACATG+TGG | - | chr1_3:21747860-21747879 | None:intergenic | 25.0% |
| ! | GTAATTAAAGACTATACGTT+TGG | - | chr1_3:21747887-21747906 | None:intergenic | 25.0% |
| !! | AATATTTTACCTCGATAGAT+AGG | + | chr1_3:21747941-21747960 | Msa0109690:three_prime_UTR | 25.0% |
| !! | ATATTTTACCTCGATAGATA+GGG | + | chr1_3:21747942-21747961 | Msa0109690:three_prime_UTR | 25.0% |
| ! | AGTACTGGAGATTAAAAATG+TGG | + | chr1_3:21745533-21745552 | Msa0109690:CDS | 30.0% |
| AGGTTATTTATGTTCTCGTT+CGG | + | chr1_3:21745579-21745598 | Msa0109690:intron | 30.0% | |
| AACCATTAGAAAGGATTTAG+AGG | - | chr1_3:21746008-21746027 | None:intergenic | 30.0% | |
| ! | GTTTCTCTAATAGTTTTCCT+AGG | + | chr1_3:21746025-21746044 | Msa0109690:intron | 30.0% |
| AACTAAAGAACACTGATGTA+TGG | - | chr1_3:21746317-21746336 | None:intergenic | 30.0% | |
| AAATAATTGTAGCTGGATTC+TGG | + | chr1_3:21746345-21746364 | Msa0109690:intron | 30.0% | |
| TGGTTGGATTTAGTATGAAA+AGG | + | chr1_3:21746365-21746384 | Msa0109690:intron | 30.0% | |
| GGTTGGATTTAGTATGAAAA+GGG | + | chr1_3:21746366-21746385 | Msa0109690:intron | 30.0% | |
| TCTATCATCTTTATCTGACA+CGG | + | chr1_3:21746541-21746560 | Msa0109690:CDS | 30.0% | |
| GAAGAAGACAAAGATAATGA+TGG | + | chr1_3:21746908-21746927 | Msa0109690:CDS | 30.0% | |
| AATGAGCATTTCAAATTGAG+TGG | + | chr1_3:21747431-21747450 | Msa0109690:exon | 30.0% | |
| TGTAGTAGCATAATCAAGTT+TGG | + | chr1_3:21747636-21747655 | Msa0109690:three_prime_UTR | 30.0% | |
| !!! | TGAAGACTTGCATTTTTTAC+CGG | + | chr1_3:21747675-21747694 | Msa0109690:three_prime_UTR | 30.0% |
| ATCTCATCAGTTACACTAAT+TGG | + | chr1_3:21747751-21747770 | Msa0109690:intron | 30.0% | |
| TGTTACTATCAAAGCTTGTG+CGG | + | chr1_3:21745238-21745257 | Msa0109690:five_prime_UTR | 35.0% | |
| !! | GGAAGTATTAACAGTTGTTC+AGG | + | chr1_3:21745286-21745305 | Msa0109690:CDS | 35.0% |
| ACAGAATCACAACCATGAAT+TGG | - | chr1_3:21745371-21745390 | None:intergenic | 35.0% | |
| TGTGATTCTGTACCTTGATA+TGG | + | chr1_3:21745380-21745399 | Msa0109690:intron | 35.0% | |
| GTGATTCTGTACCTTGATAT+GGG | + | chr1_3:21745381-21745400 | Msa0109690:intron | 35.0% | |
| ! | ACTTTCTTTGGTGCATTAAC+TGG | + | chr1_3:21745405-21745424 | Msa0109690:intron | 35.0% |
| ! | TTTGGTGCATTAACTGGATA+TGG | + | chr1_3:21745411-21745430 | Msa0109690:intron | 35.0% |
| TTGGTGCATTAACTGGATAT+GGG | + | chr1_3:21745412-21745431 | Msa0109690:intron | 35.0% | |
| ! | GTGGTTTACTATCATTTTCC+TGG | - | chr1_3:21745461-21745480 | None:intergenic | 35.0% |
| GATAGTAAACCACCATCTTA+TGG | + | chr1_3:21745468-21745487 | Msa0109690:CDS | 35.0% | |
| TTAATCTCCAGTACTTGTGT+TGG | - | chr1_3:21745528-21745547 | None:intergenic | 35.0% | |
| GTTGAAACTAAAGAACACTG+AGG | - | chr1_3:21745879-21745898 | None:intergenic | 35.0% | |
| TGGTTTATGATAGAACACCA+TGG | - | chr1_3:21745964-21745983 | None:intergenic | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr1_3:21745984-21746003 | None:intergenic | 35.0% |
| GACCTCTAAATCCTTTCTAA+TGG | + | chr1_3:21746003-21746022 | Msa0109690:intron | 35.0% | |
| TGTAAGAAGGGTAGATCAAA+TGG | - | chr1_3:21746083-21746102 | None:intergenic | 35.0% | |
| TTGATCTACCCTTCTTACAA+CGG | + | chr1_3:21746084-21746103 | Msa0109690:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | chr1_3:21746136-21746155 | None:intergenic | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | - | chr1_3:21746141-21746160 | None:intergenic | 35.0% | |
| ! | TCTACCAACTTTTCTACCAT+AGG | + | chr1_3:21746154-21746173 | Msa0109690:intron | 35.0% |
| AAATGACACCATTAGAGAGT+GGG | - | chr1_3:21746189-21746208 | None:intergenic | 35.0% | |
| AAAATGACACCATTAGAGAG+TGG | - | chr1_3:21746190-21746209 | None:intergenic | 35.0% | |
| AAGAACACTGATGTATGGTA+TGG | - | chr1_3:21746312-21746331 | None:intergenic | 35.0% | |
| CAAGCAGAAATAATTGTAGC+TGG | + | chr1_3:21746338-21746357 | Msa0109690:intron | 35.0% | |
| CTATCATCTTTATCTGACAC+GGG | + | chr1_3:21746542-21746561 | Msa0109690:CDS | 35.0% | |
| !! | AATTTTGGAGGATGTACGAT+TGG | + | chr1_3:21746574-21746593 | Msa0109690:CDS | 35.0% |
| GACCGTTAAATCAATTCATG+TGG | + | chr1_3:21746700-21746719 | Msa0109690:CDS | 35.0% | |
| ! | GGCCACATGAATTGATTTAA+CGG | - | chr1_3:21746705-21746724 | None:intergenic | 35.0% |
| ATTATTGTCCTTGCAATGTC+TGG | - | chr1_3:21746726-21746745 | None:intergenic | 35.0% | |
| ! | TGAATCTAGTTTCTCTGAAG+AGG | + | chr1_3:21746826-21746845 | Msa0109690:CDS | 35.0% |
| GCTACTTACTCCAATTCTAA+AGG | + | chr1_3:21746848-21746867 | Msa0109690:CDS | 35.0% | |
| ! | TCCAATTCTAAAGGAACAAG+TGG | + | chr1_3:21746857-21746876 | Msa0109690:CDS | 35.0% |
| !! | TCCACTTGTTCCTTTAGAAT+TGG | - | chr1_3:21746861-21746880 | None:intergenic | 35.0% |
| ! | TTCTAAAGGAACAAGTGGAA+TGG | + | chr1_3:21746862-21746881 | Msa0109690:CDS | 35.0% |
| GATTCAACAGTAATAGATGC+TGG | + | chr1_3:21747001-21747020 | Msa0109690:CDS | 35.0% | |
| TGTAACTCTGGATCATCATT+AGG | - | chr1_3:21747082-21747101 | None:intergenic | 35.0% | |
| CAATACAGACTCAGAAAACA+CGG | + | chr1_3:21747150-21747169 | Msa0109690:CDS | 35.0% | |
| ! | GATGCCAGTTTAGAATTAGT+TGG | + | chr1_3:21747205-21747224 | Msa0109690:CDS | 35.0% |
| GGAACCAACTAATTCTAAAC+TGG | - | chr1_3:21747212-21747231 | None:intergenic | 35.0% | |
| ! | AGAATTAGTTGGTTCCAGAA+AGG | + | chr1_3:21747216-21747235 | Msa0109690:CDS | 35.0% |
| TTCTTCCTTAATGTCCTTTC+TGG | - | chr1_3:21747233-21747252 | None:intergenic | 35.0% | |
| ! | AGGTGCGAAATGAATTTTTC+CGG | - | chr1_3:21747697-21747716 | None:intergenic | 35.0% |
| GAAACCGAAGTCAAAACATT+AGG | - | chr1_3:21747717-21747736 | None:intergenic | 35.0% | |
| !!! | TTTTGACTTCGGTTTCACTT+TGG | + | chr1_3:21747721-21747740 | Msa0109690:intron | 35.0% |
| !!! | GGTTTTGTTGCATTATGAAC+TGG | + | chr1_3:21747791-21747810 | Msa0109690:intron | 35.0% |
| ACTGGTTGTATTGTATCATC+AGG | + | chr1_3:21747809-21747828 | Msa0109690:intron | 35.0% | |
| CAGTTTGAATTCATGTAGAG+TGG | - | chr1_3:21748000-21748019 | None:intergenic | 35.0% | |
| GTTACTATCAAAGCTTGTGC+GGG | + | chr1_3:21745239-21745258 | Msa0109690:five_prime_UTR | 40.0% | |
| !! | CAAAGAAAGTGCCCATATCA+AGG | - | chr1_3:21745395-21745414 | None:intergenic | 40.0% |
| CTTGATATGGGCACTTTCTT+TGG | + | chr1_3:21745393-21745412 | Msa0109690:intron | 40.0% | |
| ACACTACAAGCAGTCATGAT+TGG | - | chr1_3:21745676-21745695 | None:intergenic | 40.0% | |
| GGATTTAGAGGTCAATGAGT+TGG | - | chr1_3:21745996-21746015 | None:intergenic | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | - | chr1_3:21746055-21746074 | None:intergenic | 40.0% | |
| AAGAAGGGTAGATCAAATGG+AGG | - | chr1_3:21746080-21746099 | None:intergenic | 40.0% | |
| CACACCTATGGTAGAAAAGT+TGG | - | chr1_3:21746161-21746180 | None:intergenic | 40.0% | |
| AATGACACCATTAGAGAGTG+GGG | - | chr1_3:21746188-21746207 | None:intergenic | 40.0% | |
| GTGGTAAGACTAGACAAGAT+AGG | - | chr1_3:21746217-21746236 | None:intergenic | 40.0% | |
| TGATGTATGGTATGGAGTGT+TGG | - | chr1_3:21746304-21746323 | None:intergenic | 40.0% | |
| AATTGTAGCTGGATTCTGGT+TGG | + | chr1_3:21746349-21746368 | Msa0109690:intron | 40.0% | |
| AGCCTTTGCTTAATAGCTTC+TGG | + | chr1_3:21746414-21746433 | Msa0109690:intron | 40.0% | |
| GACCAGAAGCTATTAAGCAA+AGG | - | chr1_3:21746419-21746438 | None:intergenic | 40.0% | |
| ! | CACGGGAATCGAAGAAATTT+TGG | + | chr1_3:21746559-21746578 | Msa0109690:CDS | 40.0% |
| ! | GGGAATCGAAGAAATTTTGG+AGG | + | chr1_3:21746562-21746581 | Msa0109690:CDS | 40.0% |
| ATGTACGATTGGAATGTGCA+AGG | + | chr1_3:21746585-21746604 | Msa0109690:CDS | 40.0% | |
| TTAGTAACAGTGTGTGTGTC+TGG | - | chr1_3:21746800-21746819 | None:intergenic | 40.0% | |
| TTGCCTAGTAGTACCATTCA+AGG | + | chr1_3:21747034-21747053 | Msa0109690:CDS | 40.0% | |
| CATCCTTGAATGGTACTACT+AGG | - | chr1_3:21747040-21747059 | None:intergenic | 40.0% | |
| ATTCAAGGATGTCCTGATCA+GGG | + | chr1_3:21747049-21747068 | Msa0109690:CDS | 40.0% | |
| TCCAGAGTTACATGATAGCA+TGG | + | chr1_3:21747090-21747109 | Msa0109690:CDS | 40.0% | |
| ACCATGCTATCATGTAACTC+TGG | - | chr1_3:21747094-21747113 | None:intergenic | 40.0% | |
| TGGTTCCAGAAAGGACATTA+AGG | + | chr1_3:21747225-21747244 | Msa0109690:CDS | 40.0% | |
| GGACATTAAGGAAGAAGATG+AGG | + | chr1_3:21747237-21747256 | Msa0109690:CDS | 40.0% | |
| CATTAAGGAAGAAGATGAGG+AGG | + | chr1_3:21747240-21747259 | Msa0109690:CDS | 40.0% | |
| TCTTGCGTACTCAACAAGAA+CGG | - | chr1_3:21747302-21747321 | None:intergenic | 40.0% | |
| TTGCATAGACGTCTCTTTGA+CGG | + | chr1_3:21747352-21747371 | Msa0109690:CDS | 40.0% | |
| CTCTGAGTCTATACAGAGAA+AGG | + | chr1_3:21747401-21747420 | Msa0109690:CDS | 40.0% | |
| TCTTTCATGTAAGATCTGCG+AGG | + | chr1_3:21747542-21747561 | Msa0109690:three_prime_UTR | 40.0% | |
| !!! | CGCACCTAATGTTTTGACTT+CGG | + | chr1_3:21747710-21747729 | Msa0109690:three_prime_UTR | 40.0% |
| AAAGCTTGTGCGGGTTTGAA+TGG | + | chr1_3:21745248-21745267 | Msa0109690:five_prime_UTR | 45.0% | |
| GGTTTGAATGGTATGAGCCT+GGG | + | chr1_3:21745260-21745279 | Msa0109690:exon | 45.0% | |
| ! | TCTGGAATGCCATAAGATGG+TGG | - | chr1_3:21745480-21745499 | None:intergenic | 45.0% |
| !! | TGCTCTGGAATGCCATAAGA+TGG | - | chr1_3:21745483-21745502 | None:intergenic | 45.0% |
| CAAAGAGCCAACACAAGTAC+TGG | + | chr1_3:21745518-21745537 | Msa0109690:CDS | 45.0% | |
| AGTCCCACCACATTGAGAAT+GGG | + | chr1_3:21745780-21745799 | Msa0109690:intron | 45.0% | |
| TGTCCCATTCTCAATGTGGT+GGG | - | chr1_3:21745786-21745805 | None:intergenic | 45.0% | |
| CATGTGTCCCATTCTCAATG+TGG | - | chr1_3:21745790-21745809 | None:intergenic | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr1_3:21745914-21745933 | Msa0109690:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr1_3:21745915-21745934 | Msa0109690:intron | 45.0% |
| ACATGGATCAAATGACGCCA+TGG | + | chr1_3:21745944-21745963 | Msa0109690:intron | 45.0% | |
| AAAGAGGTAGAGGAAGACCT+AGG | - | chr1_3:21746045-21746064 | None:intergenic | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | - | chr1_3:21746061-21746080 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | - | chr1_3:21746071-21746090 | None:intergenic | 45.0% | |
| ATGACACCATTAGAGAGTGG+GGG | - | chr1_3:21746187-21746206 | None:intergenic | 45.0% | |
| AGGATGTTGCATTGGATGAG+TGG | - | chr1_3:21746236-21746255 | None:intergenic | 45.0% | |
| ! | AAGTAAGTGTAGCGGAGATG+AGG | - | chr1_3:21746256-21746275 | None:intergenic | 45.0% |
| CGAGAGTCAAGTAAGTGTAG+CGG | - | chr1_3:21746264-21746283 | None:intergenic | 45.0% | |
| CACTTACTTGACTCTCGTGT+TGG | + | chr1_3:21746267-21746286 | Msa0109690:intron | 45.0% | |
| !! | GTATGGTATGGAGTGTTGGA+CGG | - | chr1_3:21746300-21746319 | None:intergenic | 45.0% |
| ! | TGTGTCTGGAGTAGGTTCTT+CGG | - | chr1_3:21746786-21746805 | None:intergenic | 45.0% |
| ACAAGTGGAATGGAGTTCCA+TGG | + | chr1_3:21746872-21746891 | Msa0109690:CDS | 45.0% | |
| CTTCTAGCACTTTGTCACCA+TGG | - | chr1_3:21746892-21746911 | None:intergenic | 45.0% | |
| CACAAGATGCTCTTGACATG+TGG | - | chr1_3:21746978-21746997 | None:intergenic | 45.0% | |
| CTGATCAGGACATCCTTGAA+TGG | - | chr1_3:21747050-21747069 | None:intergenic | 45.0% | |
| CATTCAAGGATGTCCTGATC+AGG | + | chr1_3:21747048-21747067 | Msa0109690:CDS | 45.0% | |
| TTCAAGGATGTCCTGATCAG+GGG | + | chr1_3:21747050-21747069 | Msa0109690:CDS | 45.0% | |
| TTAGGTGTATTCCCCTGATC+AGG | - | chr1_3:21747064-21747083 | None:intergenic | 45.0% | |
| AAACACGGTTCGTCCATTTC+AGG | + | chr1_3:21747165-21747184 | Msa0109690:CDS | 45.0% | |
| ACTTCGGTTTCACTTTGGCT+GGG | + | chr1_3:21747726-21747745 | Msa0109690:intron | 45.0% | |
| ATAGTCGTCCCTATCTATCG+AGG | - | chr1_3:21747953-21747972 | None:intergenic | 45.0% | |
| !!! | GAATTTTTTTATTATTTATA+AGG | + | chr1_3:21745559-21745578 | Msa0109690:intron | 5.0% |
| GGGTTTGAATGGTATGAGCC+TGG | + | chr1_3:21745259-21745278 | Msa0109690:exon | 50.0% | |
| TTGAATGGTATGAGCCTGGG+AGG | + | chr1_3:21745263-21745282 | Msa0109690:exon | 50.0% | |
| TGAATGGTATGAGCCTGGGA+GGG | + | chr1_3:21745264-21745283 | Msa0109690:exon | 50.0% | |
| CTGTTAATACTTCCCCTCCC+AGG | - | chr1_3:21745280-21745299 | None:intergenic | 50.0% | |
| TATGCCTGATGCATCACCTG+TGG | + | chr1_3:21745310-21745329 | Msa0109690:CDS | 50.0% | |
| CTTACCACAGGTGATGCATC+AGG | - | chr1_3:21745317-21745336 | None:intergenic | 50.0% | |
| ACATGTGGGGAACTTACCAC+AGG | - | chr1_3:21745329-21745348 | None:intergenic | 50.0% | |
| !! | TGTGTTGGCTCTTTGAGCAG+TGG | - | chr1_3:21745513-21745532 | None:intergenic | 50.0% |
| GAGTCCCACCACATTGAGAA+TGG | + | chr1_3:21745779-21745798 | Msa0109690:intron | 50.0% | |
| GTGTCCCATTCTCAATGTGG+TGG | - | chr1_3:21745787-21745806 | None:intergenic | 50.0% | |
| TGGGACACATGACTTCAGTG+AGG | + | chr1_3:21745799-21745818 | Msa0109690:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr1_3:21745916-21745935 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr1_3:21745913-21745932 | Msa0109690:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr1_3:21745919-21745938 | Msa0109690:intron | 50.0% | |
| CGTCGATGCCGTTGTAAGAA+GGG | - | chr1_3:21746095-21746114 | None:intergenic | 50.0% | |
| ! | CCTTCTTACAACGGCATCGA+CGG | + | chr1_3:21746093-21746112 | Msa0109690:intron | 50.0% |
| !! | CTTCTTACAACGGCATCGAC+GGG | + | chr1_3:21746094-21746113 | Msa0109690:intron | 50.0% |
| CGGAGATGAGGATGTTGCAT+TGG | - | chr1_3:21746244-21746263 | None:intergenic | 50.0% | |
| TCATGTGGCCAGACATTGCA+AGG | + | chr1_3:21746715-21746734 | Msa0109690:CDS | 50.0% | |
| ! | ACAGTGTGTGTGTCTGGAGT+AGG | - | chr1_3:21746794-21746813 | None:intergenic | 50.0% |
| ACGGTTCGTCCATTTCAGGA+GGG | + | chr1_3:21747169-21747188 | Msa0109690:CDS | 50.0% | |
| CCAGAAAAGCCCTCCTGAAA+TGG | - | chr1_3:21747181-21747200 | None:intergenic | 50.0% | |
| ! | CCATTTCAGGAGGGCTTTTC+TGG | + | chr1_3:21747178-21747197 | Msa0109690:CDS | 50.0% |
| AGCTGCTGATCGACATGCTT+CGG | - | chr1_3:21747326-21747345 | None:intergenic | 50.0% | |
| ACGTCTCTTTGACGGCAGAA+TGG | + | chr1_3:21747360-21747379 | Msa0109690:CDS | 50.0% | |
| GACTTCGGTTTCACTTTGGC+TGG | + | chr1_3:21747725-21747744 | Msa0109690:intron | 50.0% | |
| GAATGGTATGAGCCTGGGAG+GGG | + | chr1_3:21745265-21745284 | Msa0109690:exon | 55.0% | |
| ! | AGCAGTGGCTTTGCATGCTC+TGG | - | chr1_3:21745498-21745517 | None:intergenic | 55.0% |
| CGACCCCACTTAGTGGGATA+AGG | - | chr1_3:21745921-21745940 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr1_3:21745927-21745946 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr1_3:21745928-21745947 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr1_3:21745927-21745946 | Msa0109690:intron | 55.0% | |
| CCGTCGATGCCGTTGTAAGA+AGG | - | chr1_3:21746096-21746115 | None:intergenic | 55.0% | |
| GTGCTACCCCCACTCTCTAA+TGG | + | chr1_3:21746178-21746197 | Msa0109690:intron | 55.0% | |
| CACGGTTCGTCCATTTCAGG+AGG | + | chr1_3:21747168-21747187 | Msa0109690:CDS | 55.0% | |
| GAGTGGGGGTAGCACACCTA+TGG | - | chr1_3:21746173-21746192 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 21745222 | 21748048 | 21745222 | ID=Msa0109690;Name=Msa0109690 |
| chr1_3 | mRNA | 21745222 | 21748048 | 21745222 | ID=Msa0109690-mRNA-1;Parent=Msa0109690;Name=Msa0109690-mRNA-1;_AED=0.00;_eAED=0.00;_QI=50|1|1|1|0.75|0.6|5|514|324 |
| chr1_3 | exon | 21745222 | 21745331 | 21745222 | ID=Msa0109690-mRNA-1:exon:7792;Parent=Msa0109690-mRNA-1 |
| chr1_3 | exon | 21745462 | 21745554 | 21745462 | ID=Msa0109690-mRNA-1:exon:7793;Parent=Msa0109690-mRNA-1 |
| chr1_3 | exon | 21746527 | 21746606 | 21746527 | ID=Msa0109690-mRNA-1:exon:7794;Parent=Msa0109690-mRNA-1 |
| chr1_3 | exon | 21746694 | 21747731 | 21746694 | ID=Msa0109690-mRNA-1:exon:7795;Parent=Msa0109690-mRNA-1 |
| chr1_3 | exon | 21747831 | 21748048 | 21747831 | ID=Msa0109690-mRNA-1:exon:7796;Parent=Msa0109690-mRNA-1 |
| chr1_3 | five_prime_UTR | 21745222 | 21745271 | 21745222 | ID=Msa0109690-mRNA-1:five_prime_utr;Parent=Msa0109690-mRNA-1 |
| chr1_3 | CDS | 21745272 | 21745331 | 21745272 | ID=Msa0109690-mRNA-1:cds;Parent=Msa0109690-mRNA-1 |
| chr1_3 | CDS | 21745462 | 21745554 | 21745462 | ID=Msa0109690-mRNA-1:cds;Parent=Msa0109690-mRNA-1 |
| chr1_3 | CDS | 21746527 | 21746606 | 21746527 | ID=Msa0109690-mRNA-1:cds;Parent=Msa0109690-mRNA-1 |
| chr1_3 | CDS | 21746694 | 21747435 | 21746694 | ID=Msa0109690-mRNA-1:cds;Parent=Msa0109690-mRNA-1 |
| chr1_3 | three_prime_UTR | 21747436 | 21747731 | 21747436 | ID=Msa0109690-mRNA-1:three_prime_utr;Parent=Msa0109690-mRNA-1 |
| chr1_3 | three_prime_UTR | 21747831 | 21748048 | 21747831 | ID=Msa0109690-mRNA-1:three_prime_utr;Parent=Msa0109690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
