Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416340 | XP_003600842.2 | 96.088 | 409 | 14 | 1 | 1 | 407 | 1 | 409 | 0.0 | 795 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416340 | sp|Q5XF09|PT311_ARATH | 90.820 | 305 | 28 | 0 | 102 | 406 | 4 | 308 | 0.0 | 567 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416340 | A0A1S2YES8 | 86.441 | 413 | 40 | 7 | 1 | 406 | 1 | 404 | 0.0 | 663 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0050320 | Msa0416340 | -0.817762 | 2.787578e-52 | -8.615850e-47 |
| Msa0062010 | Msa0416340 | 0.803558 | 3.291793e-49 | -8.615850e-47 |
| Msa0154720 | Msa0416340 | -0.814414 | 1.559372e-51 | -8.615850e-47 |
| Msa0196260 | Msa0416340 | 0.801786 | 7.640298e-49 | -8.615850e-47 |
| Msa0225070 | Msa0416340 | -0.808264 | 3.373229e-50 | -8.615850e-47 |
| Msa0236940 | Msa0416340 | 0.830697 | 2.537178e-55 | -8.615850e-47 |
| Msa0238110 | Msa0416340 | 0.802351 | 5.845111e-49 | -8.615850e-47 |
| Msa0416340 | Msa0475330 | 0.801736 | 7.821288e-49 | -8.615850e-47 |
| Msa0416340 | Msa0508560 | 0.892012 | 2.349612e-74 | -8.615850e-47 |
| Msa0416340 | Msa0587870 | 0.814054 | 1.872833e-51 | -8.615850e-47 |
| Msa0416340 | Msa0620080 | 0.806081 | 9.779055e-50 | -8.615850e-47 |
| Msa0416340 | Msa0655970 | 0.809084 | 2.253541e-50 | -8.615850e-47 |
| Msa0416340 | Msa0789220 | 0.800218 | 1.597567e-48 | -8.615850e-47 |
| Msa0416340 | Msa0898830 | -0.830590 | 2.695038e-55 | -8.615850e-47 |
| Msa0416340 | Msa0932150 | 0.806813 | 6.856036e-50 | -8.615850e-47 |
| Msa0416340 | Msa0940780 | 0.814366 | 1.598099e-51 | -8.615850e-47 |
| Msa0416340 | Msa1030580 | 0.802855 | 4.601992e-49 | -8.615850e-47 |
| Msa0416340 | Msa1383500 | 0.994123 | 9.446213e-205 | -8.615850e-47 |
| Msa0362080 | Msa0416340 | 0.894417 | 2.514692e-75 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416340 | MtrunA17_Chr3g0112981 | 98.131 | 321 | 6 | 0 | 87 | 407 | 3 | 323 | 0.0 | 633 |
| Msa0416340 | MtrunA17_Chr5g0436341 | 90.759 | 303 | 28 | 0 | 104 | 406 | 4 | 306 | 0.0 | 562 |
| Msa0416340 | MtrunA17_Chr4g0008071 | 74.662 | 296 | 75 | 0 | 109 | 404 | 13 | 308 | 3.63e-162 | 458 |
| Msa0416340 | MtrunA17_Chr8g0382081 | 72.575 | 299 | 82 | 0 | 108 | 406 | 11 | 309 | 1.24e-156 | 444 |
| Msa0416340 | MtrunA17_Chr4g0056661 | 68.243 | 296 | 94 | 0 | 112 | 407 | 56 | 351 | 6.33e-137 | 395 |
| Msa0416340 | MtrunA17_Chr3g0103641 | 82.390 | 159 | 28 | 0 | 248 | 406 | 3 | 161 | 4.58e-93 | 276 |
| Msa0416340 | MtrunA17_Chr3g0103631 | 73.457 | 162 | 43 | 0 | 100 | 261 | 1 | 162 | 2.07e-84 | 254 |
| Msa0416340 | MtrunA17_Chr3g0114581 | 33.447 | 293 | 189 | 4 | 113 | 403 | 19 | 307 | 2.35e-49 | 170 |
| Msa0416340 | MtrunA17_Chr1g0160071 | 33.106 | 293 | 190 | 4 | 113 | 403 | 18 | 306 | 9.09e-49 | 169 |
| Msa0416340 | MtrunA17_Chr2g0307091 | 32.653 | 294 | 188 | 4 | 113 | 402 | 18 | 305 | 1.26e-35 | 134 |
| Msa0416340 | MtrunA17_Chr3g0137921 | 29.392 | 296 | 195 | 5 | 113 | 402 | 22 | 309 | 2.16e-29 | 117 |
| Msa0416340 | MtrunA17_Chr7g0270591 | 31.379 | 290 | 183 | 5 | 122 | 404 | 28 | 308 | 4.77e-28 | 114 |
| Msa0416340 | MtrunA17_Chr4g0063601 | 30.769 | 299 | 159 | 8 | 113 | 402 | 18 | 277 | 2.40e-23 | 99.8 |
| Msa0416340 | MtrunA17_Chr4g0069261 | 29.617 | 287 | 192 | 4 | 122 | 404 | 24 | 304 | 4.45e-22 | 97.1 |
| Msa0416340 | MtrunA17_Chr2g0312911 | 24.662 | 296 | 203 | 6 | 122 | 407 | 24 | 309 | 7.22e-21 | 92.8 |
| Msa0416340 | MtrunA17_Chr4g0058971 | 28.094 | 299 | 199 | 8 | 112 | 403 | 88 | 377 | 1.82e-19 | 89.4 |
| Msa0416340 | MtrunA17_Chr3g0097931 | 22.741 | 321 | 235 | 8 | 88 | 403 | 89 | 401 | 9.61e-17 | 81.6 |
| Msa0416340 | MtrunA17_Chr3g0117501 | 25.740 | 338 | 231 | 7 | 70 | 403 | 81 | 402 | 7.82e-16 | 79.0 |
| Msa0416340 | MtrunA17_Chr8g0341861 | 24.150 | 294 | 205 | 8 | 109 | 390 | 169 | 456 | 1.27e-15 | 78.6 |
| Msa0416340 | MtrunA17_Chr6g0449891 | 27.812 | 320 | 221 | 6 | 90 | 403 | 93 | 408 | 2.02e-15 | 77.4 |
| Msa0416340 | MtrunA17_Chr2g0288011 | 22.807 | 342 | 240 | 10 | 70 | 404 | 72 | 396 | 9.85e-15 | 75.5 |
| Msa0416340 | MtrunA17_Chr4g0046561 | 27.184 | 309 | 194 | 11 | 116 | 407 | 106 | 400 | 2.90e-14 | 73.9 |
| Msa0416340 | MtrunA17_Chr2g0326791 | 25.080 | 311 | 206 | 7 | 108 | 404 | 7 | 304 | 4.16e-14 | 73.2 |
| Msa0416340 | MtrunA17_Chr5g0419001 | 25.649 | 308 | 193 | 11 | 116 | 404 | 111 | 401 | 2.13e-13 | 71.2 |
| Msa0416340 | MtrunA17_Chr4g0074541 | 22.601 | 323 | 232 | 9 | 86 | 403 | 83 | 392 | 2.37e-13 | 71.2 |
| Msa0416340 | MtrunA17_Chr2g0298931 | 27.402 | 281 | 166 | 12 | 121 | 384 | 67 | 326 | 4.91e-13 | 70.1 |
| Msa0416340 | MtrunA17_Chr4g0028931 | 25.397 | 315 | 207 | 7 | 103 | 404 | 5 | 304 | 5.22e-13 | 69.7 |
| Msa0416340 | MtrunA17_Chr2g0291851 | 24.771 | 327 | 233 | 10 | 80 | 400 | 73 | 392 | 1.15e-12 | 68.9 |
| Msa0416340 | MtrunA17_Chr6g0467391 | 25.080 | 311 | 202 | 8 | 110 | 404 | 9 | 304 | 3.28e-12 | 67.0 |
| Msa0416340 | MtrunA17_Chr6g0467371 | 25.080 | 311 | 202 | 8 | 110 | 404 | 9 | 304 | 3.28e-12 | 67.0 |
| Msa0416340 | MtrunA17_Chr3g0129401 | 23.448 | 290 | 214 | 3 | 119 | 407 | 24 | 306 | 2.87e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0416340 | AT3G11320.1 | 90.820 | 305 | 28 | 0 | 102 | 406 | 4 | 308 | 0.0 | 567 |
| Msa0416340 | AT5G05820.1 | 88.961 | 308 | 33 | 1 | 100 | 406 | 1 | 308 | 0.0 | 556 |
| Msa0416340 | AT3G10290.1 | 66.873 | 323 | 104 | 1 | 87 | 406 | 33 | 355 | 1.31e-155 | 443 |
| Msa0416340 | AT5G04160.1 | 71.186 | 295 | 85 | 0 | 112 | 406 | 15 | 309 | 6.54e-155 | 440 |
| Msa0416340 | AT1G12500.1 | 65.347 | 303 | 105 | 0 | 104 | 406 | 54 | 356 | 1.09e-137 | 398 |
| Msa0416340 | AT1G21870.1 | 35.667 | 300 | 187 | 5 | 105 | 402 | 11 | 306 | 5.79e-52 | 177 |
| Msa0416340 | AT1G77610.1 | 33.904 | 292 | 189 | 3 | 113 | 403 | 13 | 301 | 1.12e-49 | 171 |
| Msa0416340 | AT5G25400.1 | 31.419 | 296 | 189 | 5 | 113 | 402 | 22 | 309 | 4.08e-32 | 124 |
| Msa0416340 | AT5G11230.1 | 31.757 | 296 | 188 | 5 | 113 | 402 | 22 | 309 | 3.08e-31 | 122 |
| Msa0416340 | AT4G32390.1 | 31.081 | 296 | 190 | 5 | 113 | 402 | 22 | 309 | 3.29e-29 | 117 |
| Msa0416340 | AT2G25520.1 | 31.081 | 296 | 190 | 5 | 113 | 402 | 22 | 309 | 2.94e-28 | 114 |
| Msa0416340 | AT3G17430.2 | 30.314 | 287 | 190 | 4 | 122 | 404 | 25 | 305 | 1.34e-25 | 107 |
| Msa0416340 | AT3G17430.1 | 30.314 | 287 | 190 | 4 | 122 | 404 | 25 | 305 | 1.34e-25 | 107 |
| Msa0416340 | AT1G53660.1 | 26.042 | 288 | 200 | 5 | 122 | 404 | 30 | 309 | 3.15e-22 | 97.1 |
| Msa0416340 | AT1G53660.3 | 26.042 | 288 | 200 | 5 | 122 | 404 | 48 | 327 | 5.83e-22 | 96.7 |
| Msa0416340 | AT1G48230.1 | 30.584 | 291 | 184 | 6 | 122 | 404 | 25 | 305 | 8.67e-22 | 96.3 |
| Msa0416340 | AT1G53660.4 | 25.735 | 272 | 191 | 4 | 136 | 404 | 12 | 275 | 8.11e-21 | 92.4 |
| Msa0416340 | AT3G14410.1 | 25.723 | 311 | 213 | 5 | 106 | 407 | 12 | 313 | 1.01e-20 | 92.8 |
| Msa0416340 | AT5G54800.1 | 23.659 | 317 | 226 | 8 | 93 | 402 | 80 | 387 | 6.33e-18 | 85.5 |
| Msa0416340 | AT1G53660.5 | 26.457 | 223 | 154 | 3 | 184 | 404 | 1 | 215 | 3.34e-17 | 80.9 |
| Msa0416340 | AT3G01550.1 | 26.875 | 320 | 223 | 6 | 90 | 403 | 59 | 373 | 4.90e-17 | 82.8 |
| Msa0416340 | AT5G17630.1 | 25.839 | 298 | 205 | 10 | 116 | 406 | 119 | 407 | 1.31e-16 | 81.6 |
| Msa0416340 | AT1G61800.1 | 21.835 | 316 | 227 | 8 | 93 | 403 | 88 | 388 | 1.13e-15 | 78.6 |
| Msa0416340 | AT1G61800.2 | 21.698 | 318 | 229 | 8 | 93 | 405 | 88 | 390 | 1.50e-15 | 78.2 |
| Msa0416340 | AT1G48230.2 | 30.435 | 230 | 144 | 5 | 181 | 404 | 13 | 232 | 3.87e-15 | 75.9 |
| Msa0416340 | AT5G33320.1 | 26.299 | 308 | 212 | 6 | 102 | 402 | 100 | 399 | 4.36e-14 | 73.9 |
| Msa0416340 | AT3G01550.2 | 26.250 | 320 | 220 | 7 | 90 | 403 | 59 | 368 | 5.42e-14 | 73.6 |
| Msa0416340 | AT5G57100.1 | 26.027 | 292 | 193 | 10 | 121 | 404 | 76 | 352 | 6.27e-14 | 73.2 |
| Msa0416340 | AT5G46110.4 | 27.425 | 299 | 197 | 10 | 116 | 406 | 115 | 401 | 1.13e-13 | 72.8 |
| Msa0416340 | AT5G46110.1 | 27.425 | 299 | 197 | 10 | 116 | 406 | 115 | 401 | 1.39e-13 | 72.4 |
| Msa0416340 | AT5G46110.2 | 27.425 | 299 | 197 | 10 | 116 | 406 | 2 | 288 | 1.75e-13 | 71.2 |
| Msa0416340 | AT1G06470.4 | 23.100 | 329 | 231 | 7 | 95 | 407 | 61 | 383 | 3.30e-13 | 71.2 |
| Msa0416340 | AT1G06470.2 | 23.100 | 329 | 231 | 7 | 95 | 407 | 61 | 383 | 3.30e-13 | 71.2 |
| Msa0416340 | AT1G06470.1 | 23.100 | 329 | 231 | 7 | 95 | 407 | 61 | 383 | 3.30e-13 | 71.2 |
| Msa0416340 | AT1G06470.3 | 23.100 | 329 | 231 | 7 | 95 | 407 | 61 | 383 | 3.30e-13 | 71.2 |
| Msa0416340 | AT2G28315.1 | 22.896 | 297 | 211 | 6 | 110 | 399 | 9 | 294 | 1.35e-11 | 65.9 |
| Msa0416340 | AT1G53660.2 | 25.843 | 178 | 129 | 2 | 122 | 296 | 48 | 225 | 1.53e-11 | 64.7 |
| Msa0416340 | AT5G57100.2 | 28.947 | 190 | 118 | 8 | 121 | 303 | 76 | 255 | 2.74e-11 | 64.7 |
| Msa0416340 | AT4G09810.1 | 23.490 | 298 | 217 | 4 | 114 | 407 | 16 | 306 | 3.46e-11 | 64.7 |
| Msa0416340 | AT2G28315.2 | 22.896 | 297 | 211 | 6 | 110 | 399 | 9 | 294 | 7.36e-11 | 63.5 |
| Msa0416340 | AT5G55950.1 | 26.937 | 271 | 161 | 9 | 121 | 376 | 69 | 317 | 8.71e-11 | 63.5 |
| Msa0416340 | AT5G55950.4 | 27.778 | 270 | 160 | 9 | 121 | 376 | 9 | 257 | 9.90e-11 | 63.2 |
Find 99 sgRNAs with CRISPR-Local
Find 434 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACCAAGTTTCCATTTATT+TGG | 0.112862 | 3_2:+63127226 | Msa0416340:CDS |
| TTTCTCTACTTAAGCATTTC+AGG | 0.137935 | 3_2:+63129181 | Msa0416340:three_prime_UTR |
| ACCCTTGTTCCTGTTGTTAC+TGG | 0.191940 | 3_2:+63125998 | Msa0416340:CDS |
| CAATATCACCACATATTAAT+TGG | 0.248203 | 3_2:+63121793 | Msa0416340:CDS |
| AAACTGGGTTTCTAAATATT+AGG | 0.258669 | 3_2:-63128818 | None:intergenic |
| ATACAATGAATCCAAATAAA+TGG | 0.258981 | 3_2:-63127237 | None:intergenic |
| TCTTCCCGCCACACTTATAA+TGG | 0.261442 | 3_2:+63127473 | Msa0416340:CDS |
| ATCATACCAGTGACTGAAAC+TGG | 0.266685 | 3_2:-63128834 | None:intergenic |
| TTCTGTGTTTCTGTTGTGTT+TGG | 0.269088 | 3_2:+63125851 | Msa0416340:CDS |
| TGAGGAAAGAGTTGTAAAAT+TGG | 0.290756 | 3_2:+63129238 | Msa0416340:three_prime_UTR |
| GAGACGATCCCAAGATAATT+TGG | 0.307870 | 3_2:+63127532 | Msa0416340:CDS |
| ATTGGTCAGGTTGACAAAAT+AGG | 0.310667 | 3_2:-63127580 | None:intergenic |
| AAGTATTTGTTGAGCAACTA+TGG | 0.329770 | 3_2:+63125680 | Msa0416340:CDS |
| TCATCAAATTATTATTCATA+TGG | 0.349278 | 3_2:+63121855 | Msa0416340:CDS |
| GCAACTGTCATATCTATTAC+TGG | 0.364395 | 3_2:+63121604 | Msa0416340:CDS |
| TCTTCCTGTATCGTTTAATC+AGG | 0.373216 | 3_2:+63125892 | Msa0416340:CDS |
| TAGCAGATACCAAATTATCT+TGG | 0.373919 | 3_2:-63127541 | None:intergenic |
| GATAATCGGATCATCATTCT+TGG | 0.383960 | 3_2:+63128919 | Msa0416340:exon |
| GTCACTGGTATGATGGGTTA+TGG | 0.398626 | 3_2:+63128843 | Msa0416340:CDS |
| TCAACACGTTTCTTCACAAT+AGG | 0.398972 | 3_2:+63125608 | Msa0416340:CDS |
| AAAGCGAACAAAGGGATAAT+CGG | 0.420587 | 3_2:+63128905 | Msa0416340:exon |
| CAGGTTTCTGAAGATCAAAA+AGG | 0.421249 | 3_2:+63125563 | Msa0416340:intron |
| TACCAGTGCTCTGACCCTTC+AGG | 0.423819 | 3_2:+63127620 | Msa0416340:CDS |
| GTAATAGATATGACAGTTGC+TGG | 0.425060 | 3_2:-63121601 | None:intergenic |
| AGTTTCAGTCACTGGTATGA+TGG | 0.426605 | 3_2:+63128836 | Msa0416340:CDS |
| TCTGTGTTTCTGTTGTGTTT+GGG | 0.427601 | 3_2:+63125852 | Msa0416340:CDS |
| AGCTGATTCCTACAGGTACT+AGG | 0.431361 | 3_2:+63128759 | Msa0416340:intron |
| CTGGTGTTGTTATTGCTAGT+GGG | 0.433213 | 3_2:+63126017 | Msa0416340:CDS |
| TCATGGTTGGCCACTTGAAA+AGG | 0.435118 | 3_2:+63121941 | Msa0416340:CDS |
| AGAGTCAAAGATTCAGAGTC+TGG | 0.446988 | 3_2:-63129035 | None:intergenic |
| ACATAGAAAGCCTCATTGAA+TGG | 0.448150 | 3_2:+63129080 | Msa0416340:three_prime_UTR |
| TCCTTCAGAAACATTCACTA+TGG | 0.451405 | 3_2:-63121895 | None:intergenic |
| GGTTATGGACTCACAGTCTT+CGG | 0.464078 | 3_2:+63128858 | Msa0416340:CDS |
| GATCTTAAAGAATTGAATCC+TGG | 0.465525 | 3_2:-63125810 | None:intergenic |
| TCGTGGATTTGCATCTTCAA+TGG | 0.465831 | 3_2:+63121558 | Msa0416340:exon |
| AGAAACCCAGTTTCAGTCAC+TGG | 0.466134 | 3_2:+63128828 | Msa0416340:CDS |
| CCTCCTTTACATGGCTCCAA+TGG | 0.467277 | 3_2:+63127437 | Msa0416340:CDS |
| AATGAATCTCCTCCTTTACA+TGG | 0.468540 | 3_2:+63127428 | Msa0416340:CDS |
| AGCAGATACCAAATTATCTT+GGG | 0.471217 | 3_2:-63127540 | None:intergenic |
| TTACATGGCTCCAATGGCTG+TGG | 0.474205 | 3_2:+63127443 | Msa0416340:CDS |
| TGAATATTCCAATTAATATG+TGG | 0.481321 | 3_2:-63121801 | None:intergenic |
| CTCTCCCTCAATCTCATGGT+TGG | 0.484941 | 3_2:+63121928 | Msa0416340:CDS |
| TACCTGAAGGGTCAGAGCAC+TGG | 0.484949 | 3_2:-63127622 | None:intergenic |
| AGAAGGAAAACCACAGCCAT+TGG | 0.484967 | 3_2:-63127453 | None:intergenic |
| CTATGCAAACTATTCGATCC+AGG | 0.487712 | 3_2:+63125792 | Msa0416340:CDS |
| ATCTCTCTCCCTCAATCTCA+TGG | 0.488796 | 3_2:+63121924 | Msa0416340:CDS |
| TTCAATGAGGCTTTCTATGT+GGG | 0.497593 | 3_2:-63129077 | None:intergenic |
| AATCCAAATAAATGGAAACT+TGG | 0.501652 | 3_2:-63127229 | None:intergenic |
| AAAAGGTTCTAAGACAATGA+AGG | 0.505897 | 3_2:+63125580 | Msa0416340:CDS |
| ATATTCAAAGGCATATTCCA+TGG | 0.507241 | 3_2:+63121817 | Msa0416340:CDS |
| ATAACAACACCAGTAACAAC+AGG | 0.507549 | 3_2:-63126007 | None:intergenic |
| ACTGGTGTTGTTATTGCTAG+TGG | 0.510277 | 3_2:+63126016 | Msa0416340:CDS |
| ATCGCCTGATTAAACGATAC+AGG | 0.511296 | 3_2:-63125896 | None:intergenic |
| CATAGAAAGCCTCATTGAAT+GGG | 0.511830 | 3_2:+63129081 | Msa0416340:three_prime_UTR |
| TTATAAGTGTGGCGGGAAGA+AGG | 0.513711 | 3_2:-63127470 | None:intergenic |
| CACCAGTAACAACAGGAACA+AGG | 0.523976 | 3_2:-63126000 | None:intergenic |
| AGTGGCCAACCATGAGATTG+AGG | 0.525477 | 3_2:-63121933 | None:intergenic |
| TTCTAAACAAATTCACCTCA+TGG | 0.525746 | 3_2:-63129003 | None:intergenic |
| TTAGTTAAACTTGTCACTCG+TGG | 0.530056 | 3_2:+63121541 | None:intergenic |
| GCTGATTCCTACAGGTACTA+GGG | 0.530609 | 3_2:+63128760 | Msa0416340:intron |
| ATTCAATGAGGCTTTCTATG+TGG | 0.532417 | 3_2:-63129078 | None:intergenic |
| ATAATCGGATCATCATTCTT+GGG | 0.533628 | 3_2:+63128920 | Msa0416340:exon |
| TTGGTATCTGCTATTTAACT+CGG | 0.538514 | 3_2:+63127551 | Msa0416340:CDS |
| GTTTCAGTCACTGGTATGAT+GGG | 0.539473 | 3_2:+63128837 | Msa0416340:CDS |
| GTATCGTTTAATCAGGCGAT+TGG | 0.541515 | 3_2:+63125899 | Msa0416340:CDS |
| CAGCCATTGGAGCCATGTAA+AGG | 0.544406 | 3_2:-63127440 | None:intergenic |
| GCCCTAAAATCAGTGCTACA+AGG | 0.550043 | 3_2:+63127283 | Msa0416340:CDS |
| CAATAGAAGAACACCAATGT+TGG | 0.550271 | 3_2:-63125654 | None:intergenic |
| ATATTAATTGGAATATTCAA+AGG | 0.556408 | 3_2:+63121805 | Msa0416340:CDS |
| TTCTTCCATTATAAGTGTGG+CGG | 0.557091 | 3_2:-63127478 | None:intergenic |
| GTGGCCAACCATGAGATTGA+GGG | 0.558110 | 3_2:-63121932 | None:intergenic |
| TATTCAAAGGCATATTCCAT+GGG | 0.558572 | 3_2:+63121818 | Msa0416340:CDS |
| TCTTCCATTATAAGTGTGGC+GGG | 0.560381 | 3_2:-63127477 | None:intergenic |
| TCAGGTAGGAGGAAGAAACT+TGG | 0.562941 | 3_2:+63121741 | Msa0416340:intron |
| AAAGGTTCTAAGACAATGAA+GGG | 0.568749 | 3_2:+63125581 | Msa0416340:CDS |
| TGCTTGCTATAACTCAAAAG+AGG | 0.574953 | 3_2:-63129105 | None:intergenic |
| ACTTATAATGGAAGAAAATG+TGG | 0.577031 | 3_2:+63127485 | Msa0416340:CDS |
| TTAGCTATGTTGCTATAGCA+TGG | 0.581935 | 3_2:+63125756 | Msa0416340:CDS |
| TGGTGTTGTTATTGCTAGTG+GGG | 0.582609 | 3_2:+63126018 | Msa0416340:CDS |
| ATGAGATTGAGGGAGAGAGA+TGG | 0.595186 | 3_2:-63121922 | None:intergenic |
| CTGGATCGAATAGTTTGCAT+AGG | 0.596131 | 3_2:-63125791 | None:intergenic |
| CAGGTACTAGGGAATGCTAA+AGG | 0.600457 | 3_2:+63128771 | Msa0416340:intron |
| GAAGTAGTCAAAGAAACCCA+TGG | 0.606705 | 3_2:-63121834 | None:intergenic |
| CAATAGGTCTTGTAGCAGCA+TGG | 0.617332 | 3_2:+63125624 | Msa0416340:CDS |
| ACCAGTAACAACAGGAACAA+GGG | 0.620205 | 3_2:-63125999 | None:intergenic |
| TCATACCAGTGACTGAAACT+GGG | 0.622203 | 3_2:-63128833 | None:intergenic |
| GCCATAGTGAATGTTTCTGA+AGG | 0.623656 | 3_2:+63121894 | Msa0416340:CDS |
| CCATTGGAGCCATGTAAAGG+AGG | 0.626569 | 3_2:-63127437 | None:intergenic |
| ATAGTGAATGTTTCTGAAGG+AGG | 0.632786 | 3_2:+63121897 | Msa0416340:CDS |
| GCATGGTATTCATCCAACAT+TGG | 0.639937 | 3_2:+63125641 | Msa0416340:CDS |
| TCAATGAGGCTTTCTATGTG+GGG | 0.645791 | 3_2:-63129076 | None:intergenic |
| ATAATGGAAGAAAATGTGGT+CGG | 0.647373 | 3_2:+63127489 | Msa0416340:CDS |
| AAATTCACCTCATGGAAGTG+AGG | 0.648634 | 3_2:-63128995 | None:intergenic |
| AACTTGGTGAACTATCTGCA+AGG | 0.655352 | 3_2:+63121757 | Msa0416340:CDS |
| ACAGTTGAGACTTACCTGAA+GGG | 0.665868 | 3_2:-63127634 | None:intergenic |
| AAAAGAGGACCCATTCAATG+AGG | 0.676341 | 3_2:-63129090 | None:intergenic |
| AAATGTGGTCGGAATCACGT+TGG | 0.686602 | 3_2:+63127500 | Msa0416340:CDS |
| ACAAGCTGTCATATGACACA+TGG | 0.698895 | 3_2:-63125726 | None:intergenic |
| CAGACAACCTCACTTCCATG+AGG | 0.765720 | 3_2:+63128988 | Msa0416340:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTAAAAAATTA+AGG | - | chr3_2:63122054-63122073 | None:intergenic | 0.0% |
| !! | TATTTAGTAAAAATAAATTG+AGG | - | chr3_2:63123914-63123933 | None:intergenic | 10.0% |
| !!! | AATATATTTTTCAAAACTAA+AGG | - | chr3_2:63124064-63124083 | None:intergenic | 10.0% |
| !! | TTTAGTTAATAAAAATGTAA+CGG | - | chr3_2:63124424-63124443 | None:intergenic | 10.0% |
| !!! | TTTCTTTCAAAAAATATTTT+TGG | - | chr3_2:63124461-63124480 | None:intergenic | 10.0% |
| !!! | TATTTTTTTTATTTCAATTG+CGG | - | chr3_2:63124565-63124584 | None:intergenic | 10.0% |
| !!! | TAAAAAATAAAAAGCATATT+TGG | - | chr3_2:63124622-63124641 | None:intergenic | 10.0% |
| !! | AGTGATAAAAATAAATTAAT+CGG | - | chr3_2:63124741-63124760 | None:intergenic | 10.0% |
| !! | AAAGTTAAATTAAATATAGA+AGG | - | chr3_2:63127836-63127855 | None:intergenic | 10.0% |
| !! | AAATAACAGATAAAAAATAA+AGG | - | chr3_2:63127976-63127995 | None:intergenic | 10.0% |
| !! | ATATTAATTGGAATATTCAA+AGG | + | chr3_2:63121805-63121824 | Msa0416340:CDS | 15.0% |
| !! | TCATCAAATTATTATTCATA+TGG | + | chr3_2:63121855-63121874 | Msa0416340:CDS | 15.0% |
| !!! | CATATATTGATTTTTTAACT+GGG | - | chr3_2:63122101-63122120 | None:intergenic | 15.0% |
| !!! | ACATATATTGATTTTTTAAC+TGG | - | chr3_2:63122102-63122121 | None:intergenic | 15.0% |
| !!! | TAAATTTTACTTTCATTTGT+TGG | - | chr3_2:63123446-63123465 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAACGTCAAA+TGG | + | chr3_2:63124180-63124199 | Msa0416340:intron | 15.0% |
| !! | AAAAAAAAAAAACGTCAAAT+GGG | + | chr3_2:63124181-63124200 | Msa0416340:intron | 15.0% |
| !!! | CATCCTTTAATATATATTTT+TGG | - | chr3_2:63124712-63124731 | None:intergenic | 15.0% |
| !!! | GATAAAATAAGACTTTTTTA+AGG | + | chr3_2:63125047-63125066 | Msa0416340:intron | 15.0% |
| !!! | TTTTGTTTTTTTTTGTTTTG+AGG | - | chr3_2:63125328-63125347 | None:intergenic | 15.0% |
| !!! | TTATATTATGACTTTTAAGA+GGG | + | chr3_2:63125955-63125974 | Msa0416340:CDS | 15.0% |
| !!! | AAACTAATCGTTTTATTTTT+TGG | + | chr3_2:63127339-63127358 | Msa0416340:intron | 15.0% |
| !!! | TTCAAGTTATATATTCAAAT+CGG | + | chr3_2:63127366-63127385 | Msa0416340:intron | 15.0% |
| !! | ACTATTAAGACTTAAAATTT+AGG | + | chr3_2:63127685-63127704 | Msa0416340:intron | 15.0% |
| !! | GTAAAAATTAAAATGAAACA+AGG | - | chr3_2:63128064-63128083 | None:intergenic | 15.0% |
| !!! | ATTAAAAGTAATTTGAAATG+TGG | - | chr3_2:63128525-63128544 | None:intergenic | 15.0% |
| !! | TGAATATTCCAATTAATATG+TGG | - | chr3_2:63121804-63121823 | None:intergenic | 20.0% |
| !!! | GAAAAGTTGATGTTTTTTTA+AGG | - | chr3_2:63122244-63122263 | None:intergenic | 20.0% |
| !! | AATGATTCTACAAAAACTAT+TGG | - | chr3_2:63122287-63122306 | None:intergenic | 20.0% |
| !!! | TTAGTATTTTATGTGTTTCT+AGG | + | chr3_2:63122499-63122518 | Msa0416340:intron | 20.0% |
| !!! | ATAAGGATATATTTTGGATT+GGG | - | chr3_2:63122663-63122682 | None:intergenic | 20.0% |
| !!! | AATAAGGATATATTTTGGAT+TGG | - | chr3_2:63122664-63122683 | None:intergenic | 20.0% |
| !! | AATCCAAAATATATCCTTAT+TGG | + | chr3_2:63122663-63122682 | Msa0416340:intron | 20.0% |
| !!! | TTAATATTTTTGGGATCAAA+AGG | - | chr3_2:63122711-63122730 | None:intergenic | 20.0% |
| !!! | CAAGGACTTTTAATATTTTT+GGG | - | chr3_2:63122720-63122739 | None:intergenic | 20.0% |
| !!! | ACAAGGACTTTTAATATTTT+TGG | - | chr3_2:63122721-63122740 | None:intergenic | 20.0% |
| !! | ATGAGATAAATACAAAATGT+GGG | - | chr3_2:63122753-63122772 | None:intergenic | 20.0% |
| !! | AATGAGATAAATACAAAATG+TGG | - | chr3_2:63122754-63122773 | None:intergenic | 20.0% |
| !!! | TTAATATTTTTGGGATCAAA+AGG | - | chr3_2:63122711-63122730 | None:intergenic | 20.0% |
| !!! | CAAGGACTTTTAATATTTTT+GGG | - | chr3_2:63122720-63122739 | None:intergenic | 20.0% |
| !!! | ACAAGGACTTTTAATATTTT+TGG | - | chr3_2:63122721-63122740 | None:intergenic | 20.0% |
| !! | ATGAGATAAATACAAAATGT+GGG | - | chr3_2:63122753-63122772 | None:intergenic | 20.0% |
| !! | AATGAGATAAATACAAAATG+TGG | - | chr3_2:63122754-63122773 | None:intergenic | 20.0% |
| !!! | AGTTTGACTTTGAATTTTTT+AGG | - | chr3_2:63122931-63122950 | None:intergenic | 20.0% |
| !! | TGTGAAAACAAAGAAATAAA+AGG | - | chr3_2:63123680-63123699 | None:intergenic | 20.0% |
| !! | TAGTAAAAATAAATTGAGGA+AGG | - | chr3_2:63123910-63123929 | None:intergenic | 20.0% |
| !!! | CCACTATTTTTACAAAATAA+GGG | - | chr3_2:63124109-63124128 | None:intergenic | 20.0% |
| !!! | CCTTATTTTGTAAAAATAGT+GGG | + | chr3_2:63124107-63124126 | Msa0416340:intron | 20.0% |
| !!! | GTACATATTTGACTTTTTTT+GGG | - | chr3_2:63124217-63124236 | None:intergenic | 20.0% |
| !!! | AGTACATATTTGACTTTTTT+TGG | - | chr3_2:63124218-63124237 | None:intergenic | 20.0% |
| !! | AAAGTCAAATATGTACTATT+TGG | + | chr3_2:63124221-63124240 | Msa0416340:intron | 20.0% |
| !! | TAAAGTGTAGAAGTTAAATT+TGG | - | chr3_2:63124492-63124511 | None:intergenic | 20.0% |
| !!! | TACAAGTTTTTAAAAGAAGT+TGG | - | chr3_2:63124813-63124832 | None:intergenic | 20.0% |
| !! | TAAAATCAACTTGTAAAATC+AGG | + | chr3_2:63124831-63124850 | Msa0416340:intron | 20.0% |
| !! | AAAATCAACTTGTAAAATCA+GGG | + | chr3_2:63124832-63124851 | Msa0416340:intron | 20.0% |
| !!! | ATTTAAAGCTATATAGTTGA+AGG | - | chr3_2:63125206-63125225 | None:intergenic | 20.0% |
| !! | AGTCATAATATAAGCAAAAA+TGG | - | chr3_2:63125948-63125967 | None:intergenic | 20.0% |
| !!! | CTTATATTATGACTTTTAAG+AGG | + | chr3_2:63125954-63125973 | Msa0416340:CDS | 20.0% |
| !!! | ATTCAGTTTTTAATTGTTGA+TGG | + | chr3_2:63126092-63126111 | Msa0416340:intron | 20.0% |
| !! | AAAATGATATTGTGTATTGT+TGG | + | chr3_2:63126118-63126137 | Msa0416340:intron | 20.0% |
| !!! | CATCAAATTTTATCTAGTTT+AGG | + | chr3_2:63126381-63126400 | Msa0416340:intron | 20.0% |
| !!! | ATGTTTTTTTTTCTTCAATG+AGG | + | chr3_2:63126519-63126538 | Msa0416340:intron | 20.0% |
| !!! | TAAATGGATTTATATGCTTT+AGG | + | chr3_2:63126549-63126568 | Msa0416340:intron | 20.0% |
| !! | CCTATTTATAAGAGAAATTT+GGG | - | chr3_2:63126963-63126982 | None:intergenic | 20.0% |
| !! | TCCTATTTATAAGAGAAATT+TGG | - | chr3_2:63126964-63126983 | None:intergenic | 20.0% |
| !! | TGTGAAAAATAAAAATGTTC+TGG | + | chr3_2:63127162-63127181 | Msa0416340:intron | 20.0% |
| !! | ATACAATGAATCCAAATAAA+TGG | - | chr3_2:63127240-63127259 | None:intergenic | 20.0% |
| !! | AACTAAATCTTAATCTCATT+GGG | - | chr3_2:63127781-63127800 | None:intergenic | 20.0% |
| !! | AAATGAAATCACAACTAAAT+GGG | - | chr3_2:63128344-63128363 | None:intergenic | 20.0% |
| !! | AATGTATACAATTAGTGTTT+AGG | + | chr3_2:63128459-63128478 | Msa0416340:intron | 20.0% |
| !! | TGTCATAAATATAAGTAGAT+GGG | + | chr3_2:63128611-63128630 | Msa0416340:intron | 20.0% |
| !! | ATTTTGCTTAAGGATCATAT+AGG | - | chr3_2:63121682-63121701 | None:intergenic | 25.0% |
| ! | ACATGAAGAATTGATCTATT+TGG | + | chr3_2:63121713-63121732 | Msa0416340:intron | 25.0% |
| !!! | TTGATCTATTTGGTTTTTTC+AGG | + | chr3_2:63121723-63121742 | Msa0416340:intron | 25.0% |
| ! | CAATATCACCACATATTAAT+TGG | + | chr3_2:63121793-63121812 | Msa0416340:CDS | 25.0% |
| ! | ACTTATAATTAGAAAACCGA+CGG | - | chr3_2:63122449-63122468 | None:intergenic | 25.0% |
| !! | GTTTTCTAATTATAAGTCAG+CGG | + | chr3_2:63122452-63122471 | Msa0416340:intron | 25.0% |
| ! | AAATACTAAAATGTCTCCAA+CGG | - | chr3_2:63122488-63122507 | None:intergenic | 25.0% |
| !! | GAACCAATAAGGATATATTT+TGG | - | chr3_2:63122669-63122688 | None:intergenic | 25.0% |
| ! | AGTCAAACTTTGACAAAAAA+AGG | + | chr3_2:63122942-63122961 | Msa0416340:intron | 25.0% |
| !! | GAAAAAATTCAAAAGCGTAT+TGG | - | chr3_2:63123107-63123126 | None:intergenic | 25.0% |
| !!! | GTTACTTTAGGATATTTCTT+AGG | - | chr3_2:63123147-63123166 | None:intergenic | 25.0% |
| !!! | TATGTTATTCAGTTTTGTCT+TGG | - | chr3_2:63123169-63123188 | None:intergenic | 25.0% |
| ! | ATGTTTCGACTAAAATTGAA+TGG | + | chr3_2:63123309-63123328 | Msa0416340:intron | 25.0% |
| !! | CATTATGATTTTGTGATTGT+AGG | + | chr3_2:63123345-63123364 | Msa0416340:intron | 25.0% |
| !! | CAAAATAGGTTGAAAAGTTT+AGG | + | chr3_2:63123536-63123555 | Msa0416340:intron | 25.0% |
| ! | AAATTTAAGCATGTTCTTAC+TGG | + | chr3_2:63123576-63123595 | Msa0416340:intron | 25.0% |
| ! | AATTTAAGCATGTTCTTACT+GGG | + | chr3_2:63123577-63123596 | Msa0416340:intron | 25.0% |
| !! | ACATTAATGTTACTTAGGTT+AGG | - | chr3_2:63123745-63123764 | None:intergenic | 25.0% |
| !! | TGCTTACATTAATGTTACTT+AGG | - | chr3_2:63123750-63123769 | None:intergenic | 25.0% |
| ! | TAATAAATATTCCAAAGTCG+CGG | + | chr3_2:63123833-63123852 | Msa0416340:intron | 25.0% |
| !! | AATTGCAATGATTTCTTTTG+AGG | + | chr3_2:63124014-63124033 | Msa0416340:intron | 25.0% |
| !! | ATAAGGGAAGTATAATTTGA+GGG | - | chr3_2:63124093-63124112 | None:intergenic | 25.0% |
| !! | AATAAGGGAAGTATAATTTG+AGG | - | chr3_2:63124094-63124113 | None:intergenic | 25.0% |
| !!! | CCCTTATTTTGTAAAAATAG+TGG | + | chr3_2:63124106-63124125 | Msa0416340:intron | 25.0% |
| !!! | CCCACTATTTTTACAAAATA+AGG | - | chr3_2:63124110-63124129 | None:intergenic | 25.0% |
| !! | CTTTTGCAATTTACTTATCA+TGG | - | chr3_2:63124399-63124418 | None:intergenic | 25.0% |
| ! | TTGTAATTATGATGTGATGT+AGG | - | chr3_2:63124529-63124548 | None:intergenic | 25.0% |
| ! | ATTGAAAATAGTGATGATAG+AGG | - | chr3_2:63124598-63124617 | None:intergenic | 25.0% |
| ! | AATGCTAAATGCCATAAATA+AGG | + | chr3_2:63124685-63124704 | Msa0416340:intron | 25.0% |
| ! | ATGCTAAATGCCATAAATAA+GGG | + | chr3_2:63124686-63124705 | Msa0416340:intron | 25.0% |
| !!! | ATATTTTTGGCCCTTATTTA+TGG | - | chr3_2:63124699-63124718 | None:intergenic | 25.0% |
| ! | GGGCCAAAAATATATATTAA+AGG | + | chr3_2:63124706-63124725 | Msa0416340:intron | 25.0% |
| !! | AACAAACATCGTTAGAATTT+TGG | + | chr3_2:63124761-63124780 | Msa0416340:intron | 25.0% |
| !! | TGTTAGTTAATTGACTCTTT+AGG | - | chr3_2:63125098-63125117 | None:intergenic | 25.0% |
| ! | CCATGAAAAAAAAAAGTTGA+AGG | - | chr3_2:63125142-63125161 | None:intergenic | 25.0% |
| !!! | CCTTCAACTTTTTTTTTTCA+TGG | + | chr3_2:63125139-63125158 | Msa0416340:intron | 25.0% |
| ! | GAGAGAAGAAGAAATAAATT+AGG | - | chr3_2:63125236-63125255 | None:intergenic | 25.0% |
| !!! | GTTTTTTTTTGTTTTGAGGA+TGG | - | chr3_2:63125324-63125343 | None:intergenic | 25.0% |
| !!! | GAAAAAGTTGTTGACTTTAA+CGG | - | chr3_2:63125475-63125494 | None:intergenic | 25.0% |
| !! | TCATGATTGTGATTTGAAAT+GGG | - | chr3_2:63125535-63125554 | None:intergenic | 25.0% |
| ! | TTCATGATTGTGATTTGAAA+TGG | - | chr3_2:63125536-63125555 | None:intergenic | 25.0% |
| ! | GAAACAAAAACAATGAACAA+GGG | - | chr3_2:63126062-63126081 | None:intergenic | 25.0% |
| ! | AGAAACAAAAACAATGAACA+AGG | - | chr3_2:63126063-63126082 | None:intergenic | 25.0% |
| ! | AATTGTATTTAGTGTATGCT+TGG | + | chr3_2:63126176-63126195 | Msa0416340:intron | 25.0% |
| ! | TGAATAATGTGACTTATGTT+TGG | + | chr3_2:63126267-63126286 | Msa0416340:intron | 25.0% |
| !! | ATGATAATGTGCATTGTTAA+TGG | + | chr3_2:63126301-63126320 | Msa0416340:intron | 25.0% |
| !! | TGATAATGTGCATTGTTAAT+GGG | + | chr3_2:63126302-63126321 | Msa0416340:intron | 25.0% |
| !! | TTATCTAGTTTAGGTTTGTT+TGG | + | chr3_2:63126390-63126409 | Msa0416340:intron | 25.0% |
| !! | TATCTAGTTTAGGTTTGTTT+GGG | + | chr3_2:63126391-63126410 | Msa0416340:intron | 25.0% |
| ! | TGTAAGATTATGTGTTGAAT+TGG | + | chr3_2:63126433-63126452 | Msa0416340:intron | 25.0% |
| ! | CCTAACTTTCTCTTATAAAT+AGG | - | chr3_2:63126881-63126900 | None:intergenic | 25.0% |
| ! | CCTATTTATAAGAGAAAGTT+AGG | + | chr3_2:63126878-63126897 | Msa0416340:intron | 25.0% |
| ! | TCAACAAAAGTGAATGTATT+TGG | + | chr3_2:63126901-63126920 | Msa0416340:intron | 25.0% |
| ! | CCCAAATTTCTCTTATAAAT+AGG | + | chr3_2:63126960-63126979 | Msa0416340:intron | 25.0% |
| ! | ATTTCTCTTATAAATAGGAC+CGG | + | chr3_2:63126965-63126984 | Msa0416340:intron | 25.0% |
| ! | AATCCAAATAAATGGAAACT+TGG | - | chr3_2:63127232-63127251 | None:intergenic | 25.0% |
| !! | ATTTTCTTCCATTATAAGTG+TGG | - | chr3_2:63127484-63127503 | None:intergenic | 25.0% |
| !! | ACTTATAATGGAAGAAAATG+TGG | + | chr3_2:63127485-63127504 | Msa0416340:CDS | 25.0% |
| ! | CAACTAAATCTTAATCTCAT+TGG | - | chr3_2:63127782-63127801 | None:intergenic | 25.0% |
| ! | ATATAGAAGGAAAACAAAGA+AGG | - | chr3_2:63127823-63127842 | None:intergenic | 25.0% |
| ! | TTTGTATCACAATATTAGCA+TGG | + | chr3_2:63127941-63127960 | Msa0416340:intron | 25.0% |
| !!! | TGTTATTTTGTAATGTGCAT+TGG | + | chr3_2:63127988-63128007 | Msa0416340:intron | 25.0% |
| ! | AAACTAGACTAAATATTGCT+AGG | - | chr3_2:63128091-63128110 | None:intergenic | 25.0% |
| !!! | ATTAATTTTGATGACATCTC+TGG | - | chr3_2:63128161-63128180 | None:intergenic | 25.0% |
| ! | GATGTCATCAAAATTAATTC+AGG | + | chr3_2:63128163-63128182 | Msa0416340:intron | 25.0% |
| ! | CAAATGAAATCACAACTAAA+TGG | - | chr3_2:63128345-63128364 | None:intergenic | 25.0% |
| ! | TCAAATATTTATGTAGCTGA+TGG | - | chr3_2:63128371-63128390 | None:intergenic | 25.0% |
| ! | AGCTACATAAATATTTGATC+AGG | + | chr3_2:63128373-63128392 | Msa0416340:intron | 25.0% |
| ! | GTGTCATAAATATAAGTAGA+TGG | + | chr3_2:63128610-63128629 | Msa0416340:intron | 25.0% |
| ! | AAACTGGGTTTCTAAATATT+AGG | - | chr3_2:63128821-63128840 | None:intergenic | 25.0% |
| !! | TTTTTGTCGTATATTCTTTG+AGG | + | chr3_2:63129220-63129239 | Msa0416340:three_prime_UTR | 25.0% |
| ! | TGATCACTTGATTTTGCTTA+AGG | - | chr3_2:63121692-63121711 | None:intergenic | 30.0% |
| !!! | TCTATTTGGTTTTTTCAGGT+AGG | + | chr3_2:63121727-63121746 | Msa0416340:intron | 30.0% |
| ! | ATATTCAAAGGCATATTCCA+TGG | + | chr3_2:63121817-63121836 | Msa0416340:CDS | 30.0% |
| ! | TATTCAAAGGCATATTCCAT+GGG | + | chr3_2:63121818-63121837 | Msa0416340:CDS | 30.0% |
| !!! | TGATTTTTTAACTGGGACAT+TGG | - | chr3_2:63122094-63122113 | None:intergenic | 30.0% |
| AAACAACCATCATAAGGTTT+AGG | - | chr3_2:63122358-63122377 | None:intergenic | 30.0% | |
| GAAGAAAAACAACCATCATA+AGG | - | chr3_2:63122364-63122383 | None:intergenic | 30.0% | |
| !! | AGTCTTTTTCATGTGTTTCT+AGG | - | chr3_2:63122402-63122421 | None:intergenic | 30.0% |
| AAAAAGACTAAAAAGTCCAG+CGG | + | chr3_2:63122413-63122432 | Msa0416340:intron | 30.0% | |
| ! | GTTTAGTTTAGGAACCAATA+AGG | - | chr3_2:63122680-63122699 | None:intergenic | 30.0% |
| ! | AGGAGTATAAGGTTTAGTTT+AGG | - | chr3_2:63122691-63122710 | None:intergenic | 30.0% |
| ! | GAATATTTAGGGTAGACATT+AGG | - | chr3_2:63123002-63123021 | None:intergenic | 30.0% |
| GCTAGGAATAGGAATATTTA+GGG | - | chr3_2:63123013-63123032 | None:intergenic | 30.0% | |
| AGCTAGGAATAGGAATATTT+AGG | - | chr3_2:63123014-63123033 | None:intergenic | 30.0% | |
| CTTTATTGTTAGCTAGGAAT+AGG | - | chr3_2:63123024-63123043 | None:intergenic | 30.0% | |
| GTACTACTTTATTGTTAGCT+AGG | - | chr3_2:63123030-63123049 | None:intergenic | 30.0% | |
| AGTAGTACTTACATGACAAA+TGG | + | chr3_2:63123042-63123061 | Msa0416340:intron | 30.0% | |
| GTAGTACTTACATGACAAAT+GGG | + | chr3_2:63123043-63123062 | Msa0416340:intron | 30.0% | |
| ! | GATTTGAGCGAATTTTTGTT+TGG | + | chr3_2:63123065-63123084 | Msa0416340:intron | 30.0% |
| !! | AGTTTTGTCTTGGTTACTTT+AGG | - | chr3_2:63123159-63123178 | None:intergenic | 30.0% |
| ATTTCCAACTACAATGAAGT+GGG | - | chr3_2:63123221-63123240 | None:intergenic | 30.0% | |
| AATTTCCAACTACAATGAAG+TGG | - | chr3_2:63123222-63123241 | None:intergenic | 30.0% | |
| ACTTCATTGTAGTTGGAAAT+TGG | + | chr3_2:63123221-63123240 | Msa0416340:intron | 30.0% | |
| CTTCATTGTAGTTGGAAATT+GGG | + | chr3_2:63123222-63123241 | Msa0416340:intron | 30.0% | |
| TTAATATTCTGCACGACAAT+TGG | - | chr3_2:63123381-63123400 | None:intergenic | 30.0% | |
| !!! | TTTCAACCTATTTTGACTTC+AGG | - | chr3_2:63123531-63123550 | None:intergenic | 30.0% |
| CCATCACACACAAAAAAAAA+TGG | - | chr3_2:63123607-63123626 | None:intergenic | 30.0% | |
| !!! | CCATTTTTTTTTGTGTGTGA+TGG | + | chr3_2:63123604-63123623 | Msa0416340:intron | 30.0% |
| !! | TTTGTTTTCACATAAGAACG+TGG | + | chr3_2:63123688-63123707 | Msa0416340:intron | 30.0% |
| GAAAATAAACAAGTCACTTC+CGG | + | chr3_2:63123710-63123729 | Msa0416340:intron | 30.0% | |
| TATTAGGAATAGTCCAACTT+AGG | - | chr3_2:63123818-63123837 | None:intergenic | 30.0% | |
| !! | GCGACTTTGGAATATTTATT+AGG | - | chr3_2:63123834-63123853 | None:intergenic | 30.0% |
| AATAAATATTCCAAAGTCGC+GGG | + | chr3_2:63123834-63123853 | Msa0416340:intron | 30.0% | |
| ! | TAAGGGAAGTATAATTTGAG+GGG | - | chr3_2:63124092-63124111 | None:intergenic | 30.0% |
| TGTTGTAATTGTATGGTCAA+CGG | - | chr3_2:63124321-63124340 | None:intergenic | 30.0% | |
| ! | ACATCGTTAGAATTTTGGAT+TGG | + | chr3_2:63124766-63124785 | Msa0416340:intron | 30.0% |
| ! | CATCGTTAGAATTTTGGATT+GGG | + | chr3_2:63124767-63124786 | Msa0416340:intron | 30.0% |
| ! | TTGTGATTTGAAATGGGTAA+TGG | - | chr3_2:63125529-63125548 | None:intergenic | 30.0% |
| CACAATCATGAAATTGTTAC+AGG | + | chr3_2:63125544-63125563 | Msa0416340:intron | 30.0% | |
| !! | AAAAGGTTCTAAGACAATGA+AGG | + | chr3_2:63125580-63125599 | Msa0416340:CDS | 30.0% |
| !! | AAAGGTTCTAAGACAATGAA+GGG | + | chr3_2:63125581-63125600 | Msa0416340:CDS | 30.0% |
| ! | AAGTATTTGTTGAGCAACTA+TGG | + | chr3_2:63125680-63125699 | Msa0416340:CDS | 30.0% |
| GATCTTAAAGAATTGAATCC+TGG | - | chr3_2:63125813-63125832 | None:intergenic | 30.0% | |
| !! | TATTATGACTTTTAAGAGGG+AGG | + | chr3_2:63125958-63125977 | Msa0416340:CDS | 30.0% |
| TGATATTGTGTATTGTTGGT+AGG | + | chr3_2:63126122-63126141 | Msa0416340:intron | 30.0% | |
| TTAATGGGAATGGTATAGTA+TGG | + | chr3_2:63126317-63126336 | Msa0416340:intron | 30.0% | |
| TAATGGGAATGGTATAGTAT+GGG | + | chr3_2:63126318-63126337 | Msa0416340:intron | 30.0% | |
| !!! | TATGGGGGAGTTATTTTTTT+GGG | + | chr3_2:63126335-63126354 | Msa0416340:intron | 30.0% |
| !!! | TTTGGGTGTTGACTTTTTTA+TGG | + | chr3_2:63126352-63126371 | Msa0416340:intron | 30.0% |
| !! | ATACGAGTTTTGTCAAATAG+TGG | + | chr3_2:63126645-63126664 | Msa0416340:intron | 30.0% |
| !! | TACGAGTTTTGTCAAATAGT+GGG | + | chr3_2:63126646-63126665 | Msa0416340:intron | 30.0% |
| AGTCTGAATATGTTCTGTAT+TGG | + | chr3_2:63126832-63126851 | Msa0416340:intron | 30.0% | |
| CTTTCTCTTATAAATAGGAC+CGG | - | chr3_2:63126876-63126895 | None:intergenic | 30.0% | |
| !!! | TTGTATCCAGTTTTAAGCAA+TGG | + | chr3_2:63127096-63127115 | Msa0416340:intron | 30.0% |
| AATCTACCATTGCTTAAAAC+TGG | - | chr3_2:63127105-63127124 | None:intergenic | 30.0% | |
| TCTTCCTCTATTTGATCATA+GGG | + | chr3_2:63127202-63127221 | Msa0416340:intron | 30.0% | |
| GAACCAAGTTTCCATTTATT+TGG | + | chr3_2:63127226-63127245 | Msa0416340:CDS | 30.0% | |
| ! | GAATTTTGCTTTCTTCTGAA+GGG | + | chr3_2:63127305-63127324 | Msa0416340:CDS | 30.0% |
| ! | ATAATGGAAGAAAATGTGGT+CGG | + | chr3_2:63127489-63127508 | Msa0416340:CDS | 30.0% |
| AGCAGATACCAAATTATCTT+GGG | - | chr3_2:63127543-63127562 | None:intergenic | 30.0% | |
| TAGCAGATACCAAATTATCT+TGG | - | chr3_2:63127544-63127563 | None:intergenic | 30.0% | |
| ! | TTGGTATCTGCTATTTAACT+CGG | + | chr3_2:63127551-63127570 | Msa0416340:CDS | 30.0% |
| ATGTTTCGTGACCAAAAAAT+TGG | - | chr3_2:63127601-63127620 | None:intergenic | 30.0% | |
| GTCTTAATAGTTTCGAAAGA+GGG | - | chr3_2:63127676-63127695 | None:intergenic | 30.0% | |
| AGTCTTAATAGTTTCGAAAG+AGG | - | chr3_2:63127677-63127696 | None:intergenic | 30.0% | |
| AAATCTTAATCTCATTGGGT+GGG | - | chr3_2:63127777-63127796 | None:intergenic | 30.0% | |
| TAAATCTTAATCTCATTGGG+TGG | - | chr3_2:63127778-63127797 | None:intergenic | 30.0% | |
| AATGTCACTAAACTTTCTAC+TGG | + | chr3_2:63128187-63128206 | Msa0416340:intron | 30.0% | |
| ATGACTCATTAACTATGATC+AGG | + | chr3_2:63128271-63128290 | Msa0416340:intron | 30.0% | |
| AAATGGGAGAGAAAGAAAAT+TGG | - | chr3_2:63128328-63128347 | None:intergenic | 30.0% | |
| ATAAATATAAGTAGATGGGC+TGG | + | chr3_2:63128615-63128634 | Msa0416340:intron | 30.0% | |
| ! | TAAATATAAGTAGATGGGCT+GGG | + | chr3_2:63128616-63128635 | Msa0416340:intron | 30.0% |
| ATAATCGGATCATCATTCTT+GGG | + | chr3_2:63128920-63128939 | Msa0416340:exon | 30.0% | |
| TTCTAAACAAATTCACCTCA+TGG | - | chr3_2:63129006-63129025 | None:intergenic | 30.0% | |
| ! | TATTGCAACTTTTGTACTGT+GGG | - | chr3_2:63129150-63129169 | None:intergenic | 30.0% |
| ! | TTATTGCAACTTTTGTACTG+TGG | - | chr3_2:63129151-63129170 | None:intergenic | 30.0% |
| TTTCTCTACTTAAGCATTTC+AGG | + | chr3_2:63129181-63129200 | Msa0416340:three_prime_UTR | 30.0% | |
| TGAGGAAAGAGTTGTAAAAT+TGG | + | chr3_2:63129238-63129257 | Msa0416340:three_prime_UTR | 30.0% | |
| GTAATAGATATGACAGTTGC+TGG | - | chr3_2:63121604-63121623 | None:intergenic | 35.0% | |
| GCAACTGTCATATCTATTAC+TGG | + | chr3_2:63121604-63121623 | Msa0416340:CDS | 35.0% | |
| !!! | ATTTGGTTTTTTCAGGTAGG+AGG | + | chr3_2:63121730-63121749 | Msa0416340:intron | 35.0% |
| TCCTTCAGAAACATTCACTA+TGG | - | chr3_2:63121898-63121917 | None:intergenic | 35.0% | |
| ! | ATAGTGAATGTTTCTGAAGG+AGG | + | chr3_2:63121897-63121916 | Msa0416340:CDS | 35.0% |
| ! | TGTTTTCTTAACCAATGTCC+CGG | + | chr3_2:63122187-63122206 | Msa0416340:intron | 35.0% |
| ! | AGTTTTCGCGTCATGTTAAT+CGG | - | chr3_2:63122217-63122236 | None:intergenic | 35.0% |
| CATGATCCTAAACCTTATGA+TGG | + | chr3_2:63122349-63122368 | Msa0416340:intron | 35.0% | |
| ! | AAGGTCAAAGGAGTACAATA+AGG | - | chr3_2:63122557-63122576 | None:intergenic | 35.0% |
| TATTGTACTCCTTTGACCTT+TGG | + | chr3_2:63122557-63122576 | Msa0416340:intron | 35.0% | |
| ATTGTACTCCTTTGACCTTT+GGG | + | chr3_2:63122558-63122577 | Msa0416340:intron | 35.0% | |
| AAATTTCCTAGATGTCCCAA+AGG | - | chr3_2:63122576-63122595 | None:intergenic | 35.0% | |
| ! | AAGGTCAAAGGAGTACAATA+AGG | - | chr3_2:63122557-63122576 | None:intergenic | 35.0% |
| TATTGTACTCCTTTGACCTT+TGG | + | chr3_2:63122557-63122576 | Msa0416340:intron | 35.0% | |
| ATTGTACTCCTTTGACCTTT+GGG | + | chr3_2:63122558-63122577 | Msa0416340:intron | 35.0% | |
| ! | TTGGGATCAAAAGGAGTATA+AGG | - | chr3_2:63122702-63122721 | None:intergenic | 35.0% |
| !! | ATTAGGATTGATTTGGAGCT+GGG | - | chr3_2:63122985-63123004 | None:intergenic | 35.0% |
| GGTAGACATTAGGATTGATT+TGG | - | chr3_2:63122992-63123011 | None:intergenic | 35.0% | |
| !! | TTGAGCGAATTTTTGTTTGG+TGG | + | chr3_2:63123068-63123087 | Msa0416340:intron | 35.0% |
| !! | TGGGTTGGTTCAAGAAAATT+TGG | - | chr3_2:63123202-63123221 | None:intergenic | 35.0% |
| TGTTCTCCTGAAGTCAAAAT+AGG | + | chr3_2:63123522-63123541 | Msa0416340:intron | 35.0% | |
| ! | TCCAATTTTTGCACCTAAGT+TGG | + | chr3_2:63123802-63123821 | Msa0416340:intron | 35.0% |
| TCCAACTTAGGTGCAAAAAT+TGG | - | chr3_2:63123806-63123825 | None:intergenic | 35.0% | |
| ATAAATATTCCAAAGTCGCG+GGG | + | chr3_2:63123835-63123854 | Msa0416340:intron | 35.0% | |
| AGGAAGTTTACGAGATGAAT+TGG | - | chr3_2:63123875-63123894 | None:intergenic | 35.0% | |
| ATTCATCTCGTAAACTTCCT+AGG | + | chr3_2:63123875-63123894 | Msa0416340:intron | 35.0% | |
| !! | AGGCACTTGTTGTAATTGTA+TGG | - | chr3_2:63124328-63124347 | None:intergenic | 35.0% |
| ! | AGTGATGATAGAGGTTGATT+TGG | - | chr3_2:63124589-63124608 | None:intergenic | 35.0% |
| TTGGGGAAATTAAGGAATGA+GGG | - | chr3_2:63125414-63125433 | None:intergenic | 35.0% | |
| TTTGGGGAAATTAAGGAATG+AGG | - | chr3_2:63125415-63125434 | None:intergenic | 35.0% | |
| TTGAAAAGGGTCGAAGAAAA+CGG | - | chr3_2:63125497-63125516 | None:intergenic | 35.0% | |
| !! | ATGGATCTGAGCATTGAAAA+GGG | - | chr3_2:63125510-63125529 | None:intergenic | 35.0% |
| !! | AATGGATCTGAGCATTGAAA+AGG | - | chr3_2:63125511-63125530 | None:intergenic | 35.0% |
| ! | CAGGTTTCTGAAGATCAAAA+AGG | + | chr3_2:63125563-63125582 | Msa0416340:intron | 35.0% |
| TCAACACGTTTCTTCACAAT+AGG | + | chr3_2:63125608-63125627 | Msa0416340:CDS | 35.0% | |
| CAATAGAAGAACACCAATGT+TGG | - | chr3_2:63125657-63125676 | None:intergenic | 35.0% | |
| TGACACATGGTGAGAAAAAT+AGG | - | chr3_2:63125716-63125735 | None:intergenic | 35.0% | |
| TTAGCTATGTTGCTATAGCA+TGG | + | chr3_2:63125756-63125775 | Msa0416340:CDS | 35.0% | |
| ! | TTCTGTGTTTCTGTTGTGTT+TGG | + | chr3_2:63125851-63125870 | Msa0416340:CDS | 35.0% |
| ! | TCTGTGTTTCTGTTGTGTTT+GGG | + | chr3_2:63125852-63125871 | Msa0416340:CDS | 35.0% |
| TCTTCCTGTATCGTTTAATC+AGG | + | chr3_2:63125892-63125911 | Msa0416340:CDS | 35.0% | |
| GCAAAAATGGCAGTGAAAAA+AGG | - | chr3_2:63125935-63125954 | None:intergenic | 35.0% | |
| ATAACAACACCAGTAACAAC+AGG | - | chr3_2:63126010-63126029 | None:intergenic | 35.0% | |
| ! | TTGTGTATTGTTGGTAGGAA+TGG | + | chr3_2:63126127-63126146 | Msa0416340:intron | 35.0% |
| !! | AGGAATGGTTGACTTTTGTA+TGG | + | chr3_2:63126142-63126161 | Msa0416340:intron | 35.0% |
| !! | TTAGTGTATGCTTGGTTCTA+TGG | + | chr3_2:63126184-63126203 | Msa0416340:intron | 35.0% |
| ATGTGCATTGTTAATGGGAA+TGG | + | chr3_2:63126307-63126326 | Msa0416340:intron | 35.0% | |
| AATGGGAATGGTATAGTATG+GGG | + | chr3_2:63126319-63126338 | Msa0416340:intron | 35.0% | |
| !!! | GTATGGGGGAGTTATTTTTT+TGG | + | chr3_2:63126334-63126353 | Msa0416340:intron | 35.0% |
| ! | GTTTGGGATGTGATTTCAAA+TGG | + | chr3_2:63126407-63126426 | Msa0416340:intron | 35.0% |
| ! | GTTGAGTCAACTTTGTCTTT+TGG | + | chr3_2:63126577-63126596 | Msa0416340:intron | 35.0% |
| !!! | AGGGAGTATTTGTTTTACCA+GGG | + | chr3_2:63126988-63127007 | Msa0416340:intron | 35.0% |
| TAAGAAGTAATATCATGCCC+TGG | - | chr3_2:63127008-63127027 | None:intergenic | 35.0% | |
| GTCTTCCTCTATTTGATCAT+AGG | + | chr3_2:63127201-63127220 | Msa0416340:intron | 35.0% | |
| TTCACCCTATGATCAAATAG+AGG | - | chr3_2:63127209-63127228 | None:intergenic | 35.0% | |
| !!! | TCCTTGTAGCACTGATTTTA+GGG | - | chr3_2:63127287-63127306 | None:intergenic | 35.0% |
| !!! | TTCCTTGTAGCACTGATTTT+AGG | - | chr3_2:63127288-63127307 | None:intergenic | 35.0% |
| ! | GGAATTTTGCTTTCTTCTGA+AGG | + | chr3_2:63127304-63127323 | Msa0416340:CDS | 35.0% |
| AATGAATCTCCTCCTTTACA+TGG | + | chr3_2:63127428-63127447 | Msa0416340:CDS | 35.0% | |
| TTCTTCCATTATAAGTGTGG+CGG | - | chr3_2:63127481-63127500 | None:intergenic | 35.0% | |
| !! | ATTGGTCAGGTTGACAAAAT+AGG | - | chr3_2:63127583-63127602 | None:intergenic | 35.0% |
| !!! | TGTCAACCTGACCAATTTTT+TGG | + | chr3_2:63127587-63127606 | Msa0416340:CDS | 35.0% |
| TCACAATATTAGCATGGTCT+TGG | + | chr3_2:63127947-63127966 | Msa0416340:intron | 35.0% | |
| ! | TGCAGTCATTTGTGTGATTT+TGG | + | chr3_2:63128011-63128030 | Msa0416340:intron | 35.0% |
| AACTATGATCAGGATTTGTG+TGG | + | chr3_2:63128281-63128300 | Msa0416340:intron | 35.0% | |
| CATGTTAATTAACCATCCCA+AGG | - | chr3_2:63128428-63128447 | None:intergenic | 35.0% | |
| !! | CAAGAATGTTAGGCTTTGTT+TGG | + | chr3_2:63128558-63128577 | Msa0416340:intron | 35.0% |
| !! | AAATATAAGTAGATGGGCTG+GGG | + | chr3_2:63128617-63128636 | Msa0416340:intron | 35.0% |
| AGTACAAAATAGTACACAGC+TGG | - | chr3_2:63128644-63128663 | None:intergenic | 35.0% | |
| !! | TTATCCCTTTGTTCGCTTTT+TGG | - | chr3_2:63128904-63128923 | None:intergenic | 35.0% |
| AAAGCGAACAAAGGGATAAT+CGG | + | chr3_2:63128905-63128924 | Msa0416340:exon | 35.0% | |
| GATAATCGGATCATCATTCT+TGG | + | chr3_2:63128919-63128938 | Msa0416340:exon | 35.0% | |
| TTCAATGAGGCTTTCTATGT+GGG | - | chr3_2:63129080-63129099 | None:intergenic | 35.0% | |
| ATTCAATGAGGCTTTCTATG+TGG | - | chr3_2:63129081-63129100 | None:intergenic | 35.0% | |
| ACATAGAAAGCCTCATTGAA+TGG | + | chr3_2:63129080-63129099 | Msa0416340:three_prime_UTR | 35.0% | |
| CATAGAAAGCCTCATTGAAT+GGG | + | chr3_2:63129081-63129100 | Msa0416340:three_prime_UTR | 35.0% | |
| !! | TGCTTGCTATAACTCAAAAG+AGG | - | chr3_2:63129108-63129127 | None:intergenic | 35.0% |
| TCGTGGATTTGCATCTTCAA+TGG | + | chr3_2:63121558-63121577 | Msa0416340:exon | 40.0% | |
| ! | AACTTGGTGAACTATCTGCA+AGG | + | chr3_2:63121757-63121776 | Msa0416340:CDS | 40.0% |
| GAAGTAGTCAAAGAAACCCA+TGG | - | chr3_2:63121837-63121856 | None:intergenic | 40.0% | |
| ! | GCCATAGTGAATGTTTCTGA+AGG | + | chr3_2:63121894-63121913 | Msa0416340:CDS | 40.0% |
| TTGGCCACTTGAAAAGGTTT+GGG | + | chr3_2:63121947-63121966 | Msa0416340:intron | 40.0% | |
| !! | GATTCCCAAACCTTTTCAAG+TGG | - | chr3_2:63121954-63121973 | None:intergenic | 40.0% |
| ! | TGTGCAGTTAGCTTCTCAAA+AGG | + | chr3_2:63122129-63122148 | Msa0416340:intron | 40.0% |
| AAAGTTGTCCCAAAGGTCAA+AGG | - | chr3_2:63122637-63122656 | None:intergenic | 40.0% | |
| AATGTGGGATGTATGCTACA+AGG | - | chr3_2:63122738-63122757 | None:intergenic | 40.0% | |
| AATGTGGGATGTATGCTACA+AGG | - | chr3_2:63122738-63122757 | None:intergenic | 40.0% | |
| !! | CATTAGGATTGATTTGGAGC+TGG | - | chr3_2:63122986-63123005 | None:intergenic | 40.0% |
| GAGGAAGGTTAGATAATCCT+AGG | - | chr3_2:63123895-63123914 | None:intergenic | 40.0% | |
| GTCACAAGAGTTCGATGATT+AGG | - | chr3_2:63123981-63124000 | None:intergenic | 40.0% | |
| TCTTCTTCTCTCTCTCTCAA+TGG | + | chr3_2:63125244-63125263 | Msa0416340:intron | 40.0% | |
| !!! | TGTTTTGAGGATGGTGTGAA+TGG | - | chr3_2:63125315-63125334 | None:intergenic | 40.0% |
| GCATGGTATTCATCCAACAT+TGG | + | chr3_2:63125641-63125660 | Msa0416340:CDS | 40.0% | |
| ACAAGCTGTCATATGACACA+TGG | - | chr3_2:63125729-63125748 | None:intergenic | 40.0% | |
| ! | CTGGATCGAATAGTTTGCAT+AGG | - | chr3_2:63125794-63125813 | None:intergenic | 40.0% |
| CTATGCAAACTATTCGATCC+AGG | + | chr3_2:63125792-63125811 | Msa0416340:CDS | 40.0% | |
| ATCGCCTGATTAAACGATAC+AGG | - | chr3_2:63125899-63125918 | None:intergenic | 40.0% | |
| GTATCGTTTAATCAGGCGAT+TGG | + | chr3_2:63125899-63125918 | Msa0416340:CDS | 40.0% | |
| ACCAGTAACAACAGGAACAA+GGG | - | chr3_2:63126002-63126021 | None:intergenic | 40.0% | |
| !! | ACTGGTGTTGTTATTGCTAG+TGG | + | chr3_2:63126016-63126035 | Msa0416340:CDS | 40.0% |
| !! | CTGGTGTTGTTATTGCTAGT+GGG | + | chr3_2:63126017-63126036 | Msa0416340:CDS | 40.0% |
| !! | TGGTGTTGTTATTGCTAGTG+GGG | + | chr3_2:63126018-63126037 | Msa0416340:CDS | 40.0% |
| ATGGGAATGGTATAGTATGG+GGG | + | chr3_2:63126320-63126339 | Msa0416340:intron | 40.0% | |
| ACTGTAGCATTGTAGTGTCA+AGG | + | chr3_2:63126751-63126770 | Msa0416340:intron | 40.0% | |
| CTCTTATAAATAGGACCGGA+GGG | - | chr3_2:63126969-63126988 | None:intergenic | 40.0% | |
| TCTCTTATAAATAGGACCGG+AGG | - | chr3_2:63126968-63126987 | None:intergenic | 40.0% | |
| TCTCTTATAAATAGGACCGG+AGG | + | chr3_2:63126968-63126987 | Msa0416340:intron | 40.0% | |
| CTCTTATAAATAGGACCGGA+GGG | + | chr3_2:63126969-63126988 | Msa0416340:intron | 40.0% | |
| GGTAAAACAAATACTCCCTC+CGG | - | chr3_2:63126987-63127006 | None:intergenic | 40.0% | |
| !!! | GAGGGAGTATTTGTTTTACC+AGG | + | chr3_2:63126987-63127006 | Msa0416340:intron | 40.0% |
| ! | TTGCTTTCTTCTGAAGGGTA+AGG | + | chr3_2:63127310-63127329 | Msa0416340:intron | 40.0% |
| TCTTCCATTATAAGTGTGGC+GGG | - | chr3_2:63127480-63127499 | None:intergenic | 40.0% | |
| GAGACGATCCCAAGATAATT+TGG | + | chr3_2:63127532-63127551 | Msa0416340:CDS | 40.0% | |
| TCGTGACCAAAAAATTGGTC+AGG | - | chr3_2:63127596-63127615 | None:intergenic | 40.0% | |
| ACAGTTGAGACTTACCTGAA+GGG | - | chr3_2:63127637-63127656 | None:intergenic | 40.0% | |
| AACAGTTGAGACTTACCTGA+AGG | - | chr3_2:63127638-63127657 | None:intergenic | 40.0% | |
| CAACAGATGAGAGAACTTGT+TGG | - | chr3_2:63127863-63127882 | None:intergenic | 40.0% | |
| CAACAAGTTCTCTCATCTGT+TGG | + | chr3_2:63127861-63127880 | Msa0416340:intron | 40.0% | |
| !! | TTCTCTCATCTGTTGGTAGT+TGG | + | chr3_2:63127868-63127887 | Msa0416340:intron | 40.0% |
| !! | TCTCTCATCTGTTGGTAGTT+GGG | + | chr3_2:63127869-63127888 | Msa0416340:intron | 40.0% |
| ! | GTAGTTGGGACATCAGATTT+TGG | + | chr3_2:63127883-63127902 | Msa0416340:intron | 40.0% |
| TGGTTGAGTTCATAACTGAG+TGG | + | chr3_2:63128301-63128320 | Msa0416340:intron | 40.0% | |
| TTGCTGCATATGAATGACCT+TGG | + | chr3_2:63128408-63128427 | Msa0416340:intron | 40.0% | |
| TGCTGCATATGAATGACCTT+GGG | + | chr3_2:63128409-63128428 | Msa0416340:intron | 40.0% | |
| TTTCCCTCTGCAAGAATGTT+AGG | + | chr3_2:63128548-63128567 | Msa0416340:intron | 40.0% | |
| AAGCCTAACATTCTTGCAGA+GGG | - | chr3_2:63128554-63128573 | None:intergenic | 40.0% | |
| AAAGCCTAACATTCTTGCAG+AGG | - | chr3_2:63128555-63128574 | None:intergenic | 40.0% | |
| !! | TTGTTTGGCACTGGATGTTT+TGG | + | chr3_2:63128573-63128592 | Msa0416340:intron | 40.0% |
| TCATACCAGTGACTGAAACT+GGG | - | chr3_2:63128836-63128855 | None:intergenic | 40.0% | |
| ATCATACCAGTGACTGAAAC+TGG | - | chr3_2:63128837-63128856 | None:intergenic | 40.0% | |
| AGTTTCAGTCACTGGTATGA+TGG | + | chr3_2:63128836-63128855 | Msa0416340:CDS | 40.0% | |
| GTTTCAGTCACTGGTATGAT+GGG | + | chr3_2:63128837-63128856 | Msa0416340:CDS | 40.0% | |
| GAAGCCAAAAAGCGAACAAA+GGG | + | chr3_2:63128897-63128916 | Msa0416340:CDS | 40.0% | |
| AAATTCACCTCATGGAAGTG+AGG | - | chr3_2:63128998-63129017 | None:intergenic | 40.0% | |
| AGAGTCAAAGATTCAGAGTC+TGG | - | chr3_2:63129038-63129057 | None:intergenic | 40.0% | |
| TCAATGAGGCTTTCTATGTG+GGG | - | chr3_2:63129079-63129098 | None:intergenic | 40.0% | |
| AAAAGAGGACCCATTCAATG+AGG | - | chr3_2:63129093-63129112 | None:intergenic | 40.0% | |
| TCAGGTAGGAGGAAGAAACT+TGG | + | chr3_2:63121741-63121760 | Msa0416340:intron | 45.0% | |
| ATGAGATTGAGGGAGAGAGA+TGG | - | chr3_2:63121925-63121944 | None:intergenic | 45.0% | |
| ATCTCTCTCCCTCAATCTCA+TGG | + | chr3_2:63121924-63121943 | Msa0416340:CDS | 45.0% | |
| ! | TCATGGTTGGCCACTTGAAA+AGG | + | chr3_2:63121941-63121960 | Msa0416340:CDS | 45.0% |
| GTTGGCCACTTGAAAAGGTT+TGG | + | chr3_2:63121946-63121965 | Msa0416340:intron | 45.0% | |
| ! | GTCATGTTAATCGGTGTTCC+GGG | - | chr3_2:63122208-63122227 | None:intergenic | 45.0% |
| ! | CGTCATGTTAATCGGTGTTC+CGG | - | chr3_2:63122209-63122228 | None:intergenic | 45.0% |
| CTAGATGTCCCAAAGGTCAA+AGG | - | chr3_2:63122569-63122588 | None:intergenic | 45.0% | |
| !! | CTTTGACCTTTGGGACATCT+AGG | + | chr3_2:63122567-63122586 | Msa0416340:intron | 45.0% |
| TGGGTCAAAAGTTGTCCCAA+AGG | - | chr3_2:63122644-63122663 | None:intergenic | 45.0% | |
| CCAACTACAATGAAGTGGGT+TGG | - | chr3_2:63123217-63123236 | None:intergenic | 45.0% | |
| CCAACCCACTTCATTGTAGT+TGG | + | chr3_2:63123214-63123233 | Msa0416340:intron | 45.0% | |
| TTAGGTTAGGCACAACTCTC+CGG | - | chr3_2:63123732-63123751 | None:intergenic | 45.0% | |
| GGTGGGTCGAAATCGAATTA+AGG | - | chr3_2:63125368-63125387 | None:intergenic | 45.0% | |
| ATCTGTGAATCCATGGCTTG+GGG | - | chr3_2:63125440-63125459 | None:intergenic | 45.0% | |
| GATCTGTGAATCCATGGCTT+GGG | - | chr3_2:63125441-63125460 | None:intergenic | 45.0% | |
| GACTTTAACGGAACAAGCCA+TGG | - | chr3_2:63125463-63125482 | None:intergenic | 45.0% | |
| ! | CAATAGGTCTTGTAGCAGCA+TGG | + | chr3_2:63125624-63125643 | Msa0416340:CDS | 45.0% |
| !! | TGACTTTTAAGAGGGAGGCT+TGG | + | chr3_2:63125963-63125982 | Msa0416340:CDS | 45.0% |
| ACCCTTGTTCCTGTTGTTAC+TGG | + | chr3_2:63125998-63126017 | Msa0416340:CDS | 45.0% | |
| CACCAGTAACAACAGGAACA+AGG | - | chr3_2:63126003-63126022 | None:intergenic | 45.0% | |
| GCATTGAATGATACTCCCTC+CGG | + | chr3_2:63126854-63126873 | Msa0416340:intron | 45.0% | |
| GCCCTAAAATCAGTGCTACA+AGG | + | chr3_2:63127283-63127302 | Msa0416340:CDS | 45.0% | |
| AGAAGGAAAACCACAGCCAT+TGG | - | chr3_2:63127456-63127475 | None:intergenic | 45.0% | |
| ! | TTATAAGTGTGGCGGGAAGA+AGG | - | chr3_2:63127473-63127492 | None:intergenic | 45.0% |
| TCTTCCCGCCACACTTATAA+TGG | + | chr3_2:63127473-63127492 | Msa0416340:CDS | 45.0% | |
| AAATGTGGTCGGAATCACGT+TGG | + | chr3_2:63127500-63127519 | Msa0416340:CDS | 45.0% | |
| ! | GTTGGGACATCAGATTTTGG+TGG | + | chr3_2:63127886-63127905 | Msa0416340:intron | 45.0% |
| GCATATGAATGACCTTGGGA+TGG | + | chr3_2:63128413-63128432 | Msa0416340:intron | 45.0% | |
| !! | TGTTAGGCTTTGTTTGGCAC+TGG | + | chr3_2:63128564-63128583 | Msa0416340:intron | 45.0% |
| ! | ATCCTAGAGCTGATTCCTAC+AGG | + | chr3_2:63128752-63128771 | Msa0416340:intron | 45.0% |
| TACCTGTAGGAATCAGCTCT+AGG | - | chr3_2:63128757-63128776 | None:intergenic | 45.0% | |
| ! | AGCTGATTCCTACAGGTACT+AGG | + | chr3_2:63128759-63128778 | Msa0416340:intron | 45.0% |
| ! | GCTGATTCCTACAGGTACTA+GGG | + | chr3_2:63128760-63128779 | Msa0416340:intron | 45.0% |
| TAGCATTCCCTAGTACCTGT+AGG | - | chr3_2:63128770-63128789 | None:intergenic | 45.0% | |
| CAGGTACTAGGGAATGCTAA+AGG | + | chr3_2:63128771-63128790 | Msa0416340:intron | 45.0% | |
| AGAAACCCAGTTTCAGTCAC+TGG | + | chr3_2:63128828-63128847 | Msa0416340:CDS | 45.0% | |
| !! | GTCACTGGTATGATGGGTTA+TGG | + | chr3_2:63128843-63128862 | Msa0416340:CDS | 45.0% |
| GGTTATGGACTCACAGTCTT+CGG | + | chr3_2:63128858-63128877 | Msa0416340:CDS | 45.0% | |
| CGAAGCCAAAAAGCGAACAA+AGG | + | chr3_2:63128896-63128915 | Msa0416340:CDS | 45.0% | |
| !!! | TTTTAAAAAAAAAAAACATA+AGG | + | chr3_2:63122059-63122078 | Msa0416340:intron | 5.0% |
| !! | AAATAAAATAAAAAGTTATA+GGG | - | chr3_2:63124279-63124298 | None:intergenic | 5.0% |
| !! | AAAATAAAATAAAAAGTTAT+AGG | - | chr3_2:63124280-63124299 | None:intergenic | 5.0% |
| !!! | TAGTAAATTTTTTAAATAAT+AGG | - | chr3_2:63124348-63124367 | None:intergenic | 5.0% |
| !!! | TTTTATAATCAATTTTATTT+TGG | + | chr3_2:63128226-63128245 | Msa0416340:intron | 5.0% |
| CTCTCCCTCAATCTCATGGT+TGG | + | chr3_2:63121928-63121947 | Msa0416340:CDS | 50.0% | |
| GTGGCCAACCATGAGATTGA+GGG | - | chr3_2:63121935-63121954 | None:intergenic | 50.0% | |
| AGTGGCCAACCATGAGATTG+AGG | - | chr3_2:63121936-63121955 | None:intergenic | 50.0% | |
| ! | TAATCGGTGTTCCGGGACAT+TGG | - | chr3_2:63122201-63122220 | None:intergenic | 50.0% |
| CAGCGGTAGTTAACTACCGT+CGG | + | chr3_2:63122430-63122449 | Msa0416340:intron | 50.0% | |
| CAGCGGTAGTTAACTACCGT+TGG | + | chr3_2:63122430-63122449 | Msa0416340:intron | 50.0% | |
| !! | AGGATTGATTTGGAGCTGGG+TGG | - | chr3_2:63122982-63123001 | None:intergenic | 50.0% |
| TAATCATCACCCCGCGACTT+TGG | - | chr3_2:63123847-63123866 | None:intergenic | 50.0% | |
| AAGTCGCGGGGTGATGATTA+TGG | + | chr3_2:63123847-63123866 | Msa0416340:intron | 50.0% | |
| CTCTCTCTCTCAATGGATGC+TGG | + | chr3_2:63125251-63125270 | Msa0416340:intron | 50.0% | |
| AGAAGAACGAGGTGAGTGGT+GGG | - | chr3_2:63125385-63125404 | None:intergenic | 50.0% | |
| AGACAGAAGAACGAGGTGAG+TGG | - | chr3_2:63125389-63125408 | None:intergenic | 50.0% | |
| TGGGGGGTTTGGGGAAATTA+AGG | - | chr3_2:63125422-63125441 | None:intergenic | 50.0% | |
| ! | TCTGTGAATCCATGGCTTGG+GGG | - | chr3_2:63125439-63125458 | None:intergenic | 50.0% |
| GGATCTGTGAATCCATGGCT+TGG | - | chr3_2:63125442-63125461 | None:intergenic | 50.0% | |
| GCCATGGATTCACAGATCCA+TGG | + | chr3_2:63125443-63125462 | Msa0416340:intron | 50.0% | |
| GCCATGGATCTGTGAATCCA+TGG | - | chr3_2:63125447-63125466 | None:intergenic | 50.0% | |
| CCATTGGAGCCATGTAAAGG+AGG | - | chr3_2:63127440-63127459 | None:intergenic | 50.0% | |
| CCTCCTTTACATGGCTCCAA+TGG | + | chr3_2:63127437-63127456 | Msa0416340:CDS | 50.0% | |
| CAGCCATTGGAGCCATGTAA+AGG | - | chr3_2:63127443-63127462 | None:intergenic | 50.0% | |
| TTACATGGCTCCAATGGCTG+TGG | + | chr3_2:63127443-63127462 | Msa0416340:CDS | 50.0% | |
| CAGACAACCTCACTTCCATG+AGG | + | chr3_2:63128988-63129007 | Msa0416340:three_prime_UTR | 50.0% | |
| CGACGGTAGTTAACTACCGC+TGG | - | chr3_2:63122432-63122451 | None:intergenic | 55.0% | |
| CAGAAGAACGAGGTGAGTGG+TGG | - | chr3_2:63125386-63125405 | None:intergenic | 55.0% | |
| GAGGGAGAGACAGAAGAACG+AGG | - | chr3_2:63125396-63125415 | None:intergenic | 55.0% | |
| ! | ATCCATGGCTTGGGGGGTTT+GGG | - | chr3_2:63125432-63125451 | None:intergenic | 55.0% |
| ! | AATCCATGGCTTGGGGGGTT+TGG | - | chr3_2:63125433-63125452 | None:intergenic | 55.0% |
| ! | CTGTGAATCCATGGCTTGGG+GGG | - | chr3_2:63125438-63125457 | None:intergenic | 55.0% |
| TACCAGTGCTCTGACCCTTC+AGG | + | chr3_2:63127620-63127639 | Msa0416340:CDS | 55.0% | |
| TACCTGAAGGGTCAGAGCAC+TGG | - | chr3_2:63127625-63127644 | None:intergenic | 55.0% | |
| ! | TCCATGGCTTGGGGGGTTTG+GGG | - | chr3_2:63125431-63125450 | None:intergenic | 60.0% |
| TCCCCAAACCCCCCAAGCCA+TGG | + | chr3_2:63125427-63125446 | Msa0416340:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 63121544 | 63129332 | 63121544 | ID=Msa0416340;Name=Msa0416340 |
| chr3_2 | mRNA | 63121544 | 63129332 | 63121544 | ID=Msa0416340-mRNA-1;Parent=Msa0416340;Name=Msa0416340-mRNA-1;_AED=0.09;_eAED=0.09;_QI=33|1|1|1|1|1|6|409|407 |
| chr3_2 | exon | 63121544 | 63121625 | 63121544 | ID=Msa0416340-mRNA-1:exon:13677;Parent=Msa0416340-mRNA-1 |
| chr3_2 | exon | 63121745 | 63121962 | 63121745 | ID=Msa0416340-mRNA-1:exon:13678;Parent=Msa0416340-mRNA-1 |
| chr3_2 | exon | 63125566 | 63126039 | 63125566 | ID=Msa0416340-mRNA-1:exon:13679;Parent=Msa0416340-mRNA-1 |
| chr3_2 | exon | 63127223 | 63127326 | 63127223 | ID=Msa0416340-mRNA-1:exon:13680;Parent=Msa0416340-mRNA-1 |
| chr3_2 | exon | 63127413 | 63127641 | 63127413 | ID=Msa0416340-mRNA-1:exon:13681;Parent=Msa0416340-mRNA-1 |
| chr3_2 | exon | 63128774 | 63129332 | 63128774 | ID=Msa0416340-mRNA-1:exon:13682;Parent=Msa0416340-mRNA-1 |
| chr3_2 | five_prime_UTR | 63121544 | 63121576 | 63121544 | ID=Msa0416340-mRNA-1:five_prime_utr;Parent=Msa0416340-mRNA-1 |
| chr3_2 | CDS | 63121577 | 63121625 | 63121577 | ID=Msa0416340-mRNA-1:cds;Parent=Msa0416340-mRNA-1 |
| chr3_2 | CDS | 63121745 | 63121962 | 63121745 | ID=Msa0416340-mRNA-1:cds;Parent=Msa0416340-mRNA-1 |
| chr3_2 | CDS | 63125566 | 63126039 | 63125566 | ID=Msa0416340-mRNA-1:cds;Parent=Msa0416340-mRNA-1 |
| chr3_2 | CDS | 63127223 | 63127326 | 63127223 | ID=Msa0416340-mRNA-1:cds;Parent=Msa0416340-mRNA-1 |
| chr3_2 | CDS | 63127413 | 63127641 | 63127413 | ID=Msa0416340-mRNA-1:cds;Parent=Msa0416340-mRNA-1 |
| chr3_2 | CDS | 63128774 | 63128923 | 63128774 | ID=Msa0416340-mRNA-1:cds;Parent=Msa0416340-mRNA-1 |
| chr3_2 | three_prime_UTR | 63128924 | 63129332 | 63128924 | ID=Msa0416340-mRNA-1:three_prime_utr;Parent=Msa0416340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
